HEADER LYASE 01-AUG-19 6SFH TITLE CRYSTAL STRUCTURE OF DHQ1 FROM STAPHYLOCOCCUS AUREUS COVALENTLY TITLE 2 MODIFIED BY LIGAND 7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-DEHYDROQUINATE DEHYDRATASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 3-DEHYDROQUINASE,TYPE I DHQASE,TYPE I DEHYDROQUINASE,DHQ1; COMPND 5 EC: 4.2.1.10; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 GENE: AROD, SAB0760; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LYASE ACTIVITY, CHORISMATE BIOSYNTHETIC PROCESS, 3-DEHYDROQUINASE, KEYWDS 2 COVALENT INHIBITOR, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SANZ-GAITERO,E.LENCE,M.MANEIRO,R.THOMPSON,A.R.HAWKINS,C.GONZALEZ- AUTHOR 2 BELLO,M.J.VAN RAAIJ REVDAT 2 08-JUL-20 6SFH 1 JRNL REVDAT 1 15-APR-20 6SFH 0 JRNL AUTH E.LENCE,M.MANEIRO,M.SANZ-GAITERO,M.J.VAN RAAIJ,P.THOMPSON, JRNL AUTH 2 A.R.HAWKINS,C.GONZALEZ-BELLO JRNL TITL SELF-IMMOLATION OF A BACTERIAL DEHYDRATASE ENZYME BY ITS JRNL TITL 2 EPOXIDE PRODUCT. JRNL REF CHEMISTRY V. 26 8035 2020 JRNL REFN ISSN 0947-6539 JRNL PMID 32259333 JRNL DOI 10.1002/CHEM.202000759 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0218 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 42097 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.213 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2172 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.73 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3190 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.01 REMARK 3 BIN R VALUE (WORKING SET) : 0.2820 REMARK 3 BIN FREE R VALUE SET COUNT : 166 REMARK 3 BIN FREE R VALUE : 0.3080 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3776 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 32 REMARK 3 SOLVENT ATOMS : 431 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.93 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.67000 REMARK 3 B33 (A**2) : 0.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.55000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.160 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.151 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.125 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.909 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.903 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3971 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3730 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5414 ; 1.547 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8714 ; 0.860 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 501 ; 6.193 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 186 ;39.237 ;26.075 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 737 ;13.541 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;19.438 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 644 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4361 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 714 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 238 B 2 238 7878 0.090 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6SFH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1292103648. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97907 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.31 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44707 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 52.060 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.90900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.1 M BIS-TRIS PH 5.5, REMARK 280 0.2 M LI2SO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 573 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN B 234 LI LI A 303 1.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 57 72.82 40.83 REMARK 500 SER A 195 172.05 79.53 REMARK 500 VAL B 58 -36.55 -133.54 REMARK 500 SER B 195 168.98 80.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 LI A 303 LI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 234 OE1 REMARK 620 2 TYR A 238 OH 128.6 REMARK 620 3 TYR B 238 OH 87.8 92.3 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L9Z A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LI A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide L9Z B 301 and LYS B REMARK 800 160 DBREF 6SFH A 1 238 UNP Q2YWJ9 AROD_STAAB 1 238 DBREF 6SFH B 1 238 UNP Q2YWJ9 AROD_STAAB 1 238 SEQRES 1 A 238 MET THR HIS VAL GLU VAL VAL ALA THR ILE ALA PRO GLN SEQRES 2 A 238 LEU TYR ILE GLU GLU THR LEU ILE GLN LYS ILE ASN HIS SEQRES 3 A 238 ARG ILE ASP ALA ILE ASP VAL LEU GLU LEU ARG ILE ASP SEQRES 4 A 238 GLN ILE GLU ASN VAL THR VAL ASN GLN VAL ALA GLU MET SEQRES 5 A 238 ILE THR LYS LEU LYS VAL MET GLN ASP SER PHE LYS LEU SEQRES 6 A 238 LEU VAL THR TYR ARG THR LYS LEU GLN GLY GLY TYR GLY SEQRES 7 A 238 GLN PHE THR ASN ASP LEU TYR LEU ASN LEU ILE SER ASP SEQRES 8 A 238 LEU ALA ASN ILE ASN GLY ILE ASP MET ILE ASP ILE GLU SEQRES 9 A 238 TRP GLN ALA ASP ILE ASP ILE GLU LYS HIS GLN ARG ILE SEQRES 10 A 238 ILE THR HIS LEU GLN GLN TYR ASN LYS GLU VAL VAL ILE SEQRES 11 A 238 SER HIS HIS ASN PHE GLU SER THR PRO PRO LEU ASP GLU SEQRES 12 A 238 LEU GLN PHE ILE PHE PHE LYS MET GLN LYS PHE ASN PRO SEQRES 13 A 238 GLU TYR VAL LYS LEU ALA VAL MET PRO HIS ASN LYS ASN SEQRES 14 A 238 ASP VAL LEU ASN LEU LEU GLN ALA MET SER THR PHE SER SEQRES 15 A 238 ASP THR MET ASP CYS LYS VAL VAL GLY ILE SER MET SER SEQRES 16 A 238 LYS LEU GLY LEU ILE SER ARG THR ALA GLN GLY VAL PHE SEQRES 17 A 238 GLY GLY ALA LEU THR TYR GLY CYS ILE GLY GLU PRO GLN SEQRES 18 A 238 ALA PRO GLY GLN ILE ASP VAL THR ASP LEU LYS ALA GLN SEQRES 19 A 238 VAL THR LEU TYR SEQRES 1 B 238 MET THR HIS VAL GLU VAL VAL ALA THR ILE ALA PRO GLN SEQRES 2 B 238 LEU TYR ILE GLU GLU THR LEU ILE GLN LYS ILE ASN HIS SEQRES 3 B 238 ARG ILE ASP ALA ILE ASP VAL LEU GLU LEU ARG ILE ASP SEQRES 4 B 238 GLN ILE GLU ASN VAL THR VAL ASN GLN VAL ALA GLU MET SEQRES 5 B 238 ILE THR LYS LEU LYS VAL MET GLN ASP SER PHE LYS LEU SEQRES 6 B 238 LEU VAL THR TYR ARG THR LYS LEU GLN GLY GLY TYR GLY SEQRES 7 B 238 GLN PHE THR ASN ASP LEU TYR LEU ASN LEU ILE SER ASP SEQRES 8 B 238 LEU ALA ASN ILE ASN GLY ILE ASP MET ILE ASP ILE GLU SEQRES 9 B 238 TRP GLN ALA ASP ILE ASP ILE GLU LYS HIS GLN ARG ILE SEQRES 10 B 238 ILE THR HIS LEU GLN GLN TYR ASN LYS GLU VAL VAL ILE SEQRES 11 B 238 SER HIS HIS ASN PHE GLU SER THR PRO PRO LEU ASP GLU SEQRES 12 B 238 LEU GLN PHE ILE PHE PHE LYS MET GLN LYS PHE ASN PRO SEQRES 13 B 238 GLU TYR VAL LYS LEU ALA VAL MET PRO HIS ASN LYS ASN SEQRES 14 B 238 ASP VAL LEU ASN LEU LEU GLN ALA MET SER THR PHE SER SEQRES 15 B 238 ASP THR MET ASP CYS LYS VAL VAL GLY ILE SER MET SER SEQRES 16 B 238 LYS LEU GLY LEU ILE SER ARG THR ALA GLN GLY VAL PHE SEQRES 17 B 238 GLY GLY ALA LEU THR TYR GLY CYS ILE GLY GLU PRO GLN SEQRES 18 B 238 ALA PRO GLY GLN ILE ASP VAL THR ASP LEU LYS ALA GLN SEQRES 19 B 238 VAL THR LEU TYR HET L9Z A 301 13 HET SO4 A 302 5 HET LI A 303 1 HET L9Z B 301 13 HETNAM L9Z (1~{S},3~{S},4~{S},5~{R})-3-(AMINOMETHYL)-3,4,5- HETNAM 2 L9Z TRIS(HYDROXYL)CYCLOHEXANE-1-CARBOXYLIC ACID HETNAM SO4 SULFATE ION HETNAM LI LITHIUM ION FORMUL 3 L9Z 2(C8 H15 N O5) FORMUL 4 SO4 O4 S 2- FORMUL 5 LI LI 1+ FORMUL 7 HOH *431(H2 O) HELIX 1 AA1 GLU A 17 ARG A 27 1 11 HELIX 2 AA2 ILE A 28 ILE A 31 5 4 HELIX 3 AA3 THR A 45 LYS A 57 1 13 HELIX 4 AA4 THR A 71 GLY A 75 5 5 HELIX 5 AA5 THR A 81 ALA A 93 1 13 HELIX 6 AA6 ASP A 110 TYR A 124 1 15 HELIX 7 AA7 PRO A 140 LYS A 153 1 14 HELIX 8 AA8 ASN A 167 MET A 185 1 19 HELIX 9 AA9 SER A 195 LEU A 197 5 3 HELIX 10 AB1 GLY A 198 ALA A 204 1 7 HELIX 11 AB2 GLN A 205 GLY A 209 5 5 HELIX 12 AB3 ASP A 227 TYR A 238 1 12 HELIX 13 AB4 GLU B 17 ARG B 27 1 11 HELIX 14 AB5 ILE B 28 ILE B 31 5 4 HELIX 15 AB6 THR B 45 LEU B 56 1 12 HELIX 16 AB7 LYS B 57 SER B 62 5 6 HELIX 17 AB8 THR B 71 GLY B 75 5 5 HELIX 18 AB9 THR B 81 ALA B 93 1 13 HELIX 19 AC1 ASP B 110 TYR B 124 1 15 HELIX 20 AC2 PRO B 140 LYS B 153 1 14 HELIX 21 AC3 ASN B 167 MET B 185 1 19 HELIX 22 AC4 SER B 195 LEU B 197 5 3 HELIX 23 AC5 GLY B 198 ALA B 204 1 7 HELIX 24 AC6 GLN B 205 GLY B 209 5 5 HELIX 25 AC7 ASP B 227 TYR B 238 1 12 SHEET 1 AA1 8 LYS A 188 SER A 193 0 SHEET 2 AA1 8 TYR A 158 VAL A 163 1 N VAL A 163 O ILE A 192 SHEET 3 AA1 8 GLU A 127 ASN A 134 1 N HIS A 132 O ALA A 162 SHEET 4 AA1 8 MET A 100 GLU A 104 1 N ILE A 101 O VAL A 129 SHEET 5 AA1 8 LYS A 64 THR A 68 1 O LEU A 65 N MET A 100 SHEET 6 AA1 8 VAL A 33 ARG A 37 1 N LEU A 34 O LYS A 64 SHEET 7 AA1 8 GLU A 5 ILE A 10 1 N ALA A 8 O VAL A 33 SHEET 8 AA1 8 LEU A 212 CYS A 216 1 O GLY A 215 N VAL A 7 SHEET 1 AA2 8 LYS B 188 SER B 193 0 SHEET 2 AA2 8 TYR B 158 VAL B 163 1 N VAL B 163 O ILE B 192 SHEET 3 AA2 8 GLU B 127 ASN B 134 1 N HIS B 132 O ALA B 162 SHEET 4 AA2 8 MET B 100 GLU B 104 1 N ILE B 103 O VAL B 129 SHEET 5 AA2 8 LYS B 64 THR B 68 1 O LEU B 65 N MET B 100 SHEET 6 AA2 8 VAL B 33 ARG B 37 1 N LEU B 34 O LYS B 64 SHEET 7 AA2 8 GLU B 5 ILE B 10 1 N ILE B 10 O GLU B 35 SHEET 8 AA2 8 LEU B 212 CYS B 216 1 O GLY B 215 N VAL B 7 LINK NZ LYS A 160 C21 L9Z A 301 1555 1555 1.42 LINK OE1 GLN A 234 LI LI A 303 1555 1555 2.26 LINK OH TYR A 238 LI LI A 303 1555 1555 2.51 LINK NZ LYS B 160 C21 L9Z B 301 1555 1555 1.42 LINK OH TYR B 238 LI LI A 303 1555 1555 2.54 SITE 1 AC1 14 THR A 9 GLU A 35 ARG A 37 THR A 68 SITE 2 AC1 14 ARG A 70 HIS A 133 LYS A 160 ILE A 192 SITE 3 AC1 14 ARG A 202 TYR A 214 ALA A 222 GLN A 225 SITE 4 AC1 14 HOH A 464 HOH A 514 SITE 1 AC2 5 TYR A 15 GLU A 17 GLU A 18 LYS A 55 SITE 2 AC2 5 HOH A 483 SITE 1 AC3 4 GLN A 234 TYR A 238 GLN B 234 TYR B 238 SITE 1 AC4 20 THR B 9 GLU B 35 ARG B 37 THR B 68 SITE 2 AC4 20 ARG B 70 ILE B 130 SER B 131 HIS B 132 SITE 3 AC4 20 HIS B 133 MET B 151 VAL B 159 LEU B 161 SITE 4 AC4 20 VAL B 190 ILE B 192 ARG B 202 TYR B 214 SITE 5 AC4 20 ALA B 222 GLN B 225 HOH B 443 HOH B 457 CRYST1 76.934 36.148 85.599 90.00 99.95 90.00 P 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012998 0.000000 0.002280 0.00000 SCALE2 0.000000 0.027664 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011861 0.00000