HEADER HYDROLASE 05-AUG-19 6SH7 TITLE CRYSTAL STRUCTURE OF THE HUMAN DEAH-HELICASE DHX15 IN COMPLEX WITH THE TITLE 2 NKRF G-PATCH COMPND MOL_ID: 1; COMPND 2 MOLECULE: PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX15; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ATP-DEPENDENT RNA HELICASE #46,DEAH BOX PROTEIN 15; COMPND 5 EC: 3.6.4.13; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NF-KAPPA-B-REPRESSING FACTOR; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: NFKB-REPRESSING FACTOR,PROTEIN ITBA4,TRANSCRIPTION FACTOR COMPND 11 NRF; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DHX15, DBP1, DDX15; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: STAR; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: NKRF, ITBA4, NRF; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_VARIANT: STAR KEYWDS G-PATCH, DEAH HELICASE, DEXH HELICASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.JONAS,M.K.STUDER,L.IVANOVIC REVDAT 2 24-JAN-24 6SH7 1 REMARK REVDAT 1 22-APR-20 6SH7 0 JRNL AUTH M.K.STUDER,L.IVANOVIC,M.E.WEBER,S.MARTI,S.JONAS JRNL TITL STRUCTURAL BASIS FOR DEAH-HELICASE ACTIVATION BY G-PATCH JRNL TITL 2 PROTEINS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 117 7159 2020 JRNL REFN ESSN 1091-6490 JRNL PMID 32179686 JRNL DOI 10.1073/PNAS.1913880117 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 39958 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2300 - 5.3300 1.00 2890 149 0.1862 0.2406 REMARK 3 2 5.3300 - 4.2300 1.00 2759 146 0.1644 0.2004 REMARK 3 3 4.2300 - 3.7000 1.00 2736 144 0.1728 0.2060 REMARK 3 4 3.7000 - 3.3600 1.00 2705 143 0.2058 0.2465 REMARK 3 5 3.3600 - 3.1200 1.00 2735 144 0.2345 0.2714 REMARK 3 6 3.1200 - 2.9400 1.00 2692 141 0.2722 0.3190 REMARK 3 7 2.9400 - 2.7900 1.00 2689 142 0.2635 0.3331 REMARK 3 8 2.7900 - 2.6700 1.00 2682 141 0.2563 0.2868 REMARK 3 9 2.6700 - 2.5600 1.00 2686 142 0.2654 0.2770 REMARK 3 10 2.5600 - 2.4800 1.00 2704 143 0.2797 0.3441 REMARK 3 11 2.4800 - 2.4000 1.00 2694 142 0.3017 0.3786 REMARK 3 12 2.4000 - 2.3300 1.00 2674 133 0.3054 0.3381 REMARK 3 13 2.3300 - 2.2700 1.00 2661 136 0.3145 0.3337 REMARK 3 14 2.2700 - 2.2100 0.98 2668 137 0.3528 0.3649 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.391 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.766 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5824 REMARK 3 ANGLE : 0.472 7880 REMARK 3 CHIRALITY : 0.039 883 REMARK 3 PLANARITY : 0.004 1020 REMARK 3 DIHEDRAL : 15.762 3578 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 314 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1800 -15.1914 9.5169 REMARK 3 T TENSOR REMARK 3 T11: 0.5838 T22: 0.6061 REMARK 3 T33: 0.5491 T12: -0.0336 REMARK 3 T13: 0.0536 T23: 0.0635 REMARK 3 L TENSOR REMARK 3 L11: 2.2024 L22: 2.6771 REMARK 3 L33: 4.0408 L12: -0.4049 REMARK 3 L13: -0.1110 L23: -0.4931 REMARK 3 S TENSOR REMARK 3 S11: -0.2005 S12: 0.1284 S13: -0.2113 REMARK 3 S21: -0.2022 S22: 0.0177 S23: -0.1605 REMARK 3 S31: 0.4132 S32: 0.1857 S33: 0.1399 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 315 THROUGH 499 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6362 -34.8336 21.1586 REMARK 3 T TENSOR REMARK 3 T11: 0.8822 T22: 0.7976 REMARK 3 T33: 0.6812 T12: -0.1758 REMARK 3 T13: 0.0305 T23: -0.0975 REMARK 3 L TENSOR REMARK 3 L11: 3.0083 L22: 2.8247 REMARK 3 L33: 2.2208 L12: 0.9089 REMARK 3 L13: 0.9375 L23: 1.0593 REMARK 3 S TENSOR REMARK 3 S11: -0.2989 S12: 0.6940 S13: -0.4611 REMARK 3 S21: -0.4911 S22: 0.3126 S23: -0.0457 REMARK 3 S31: 0.2036 S32: 0.2123 S33: -0.0270 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 500 THROUGH 789 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3678 -15.3569 46.0846 REMARK 3 T TENSOR REMARK 3 T11: 0.4398 T22: 0.5027 REMARK 3 T33: 0.4978 T12: -0.0306 REMARK 3 T13: -0.0287 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 1.3669 L22: 1.6098 REMARK 3 L33: 1.4704 L12: -0.1666 REMARK 3 L13: 0.0662 L23: -0.3865 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: -0.0022 S13: 0.0683 REMARK 3 S21: -0.0041 S22: -0.0200 S23: 0.0638 REMARK 3 S31: -0.0417 S32: -0.0030 S33: 0.0027 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 551 THROUGH 562 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5612 5.8087 38.6768 REMARK 3 T TENSOR REMARK 3 T11: 1.2764 T22: 0.9450 REMARK 3 T33: 1.0873 T12: 0.1137 REMARK 3 T13: 0.1012 T23: -0.0134 REMARK 3 L TENSOR REMARK 3 L11: 8.0788 L22: 9.3005 REMARK 3 L33: 4.7475 L12: -1.2753 REMARK 3 L13: 5.4812 L23: 2.1885 REMARK 3 S TENSOR REMARK 3 S11: -0.1200 S12: -1.0278 S13: -0.3615 REMARK 3 S21: 1.2392 S22: -0.0224 S23: 1.3599 REMARK 3 S31: 0.4367 S32: -1.3311 S33: -0.3416 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 563 THROUGH 582 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6529 -0.7182 26.8514 REMARK 3 T TENSOR REMARK 3 T11: 0.8841 T22: 1.1739 REMARK 3 T33: 0.7596 T12: 0.0513 REMARK 3 T13: -0.0368 T23: 0.1399 REMARK 3 L TENSOR REMARK 3 L11: 0.2128 L22: 0.1825 REMARK 3 L33: 0.0866 L12: 0.1890 REMARK 3 L13: 0.1239 L23: 0.1184 REMARK 3 S TENSOR REMARK 3 S11: 0.0058 S12: 0.2433 S13: 0.3875 REMARK 3 S21: -0.9735 S22: -0.5167 S23: 0.4984 REMARK 3 S31: 0.2342 S32: -1.1322 S33: -0.0242 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 583 THROUGH 596 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1391 -29.4606 31.6673 REMARK 3 T TENSOR REMARK 3 T11: 1.2681 T22: 1.0220 REMARK 3 T33: 1.1153 T12: 0.0243 REMARK 3 T13: -0.1110 T23: -0.0846 REMARK 3 L TENSOR REMARK 3 L11: 0.0171 L22: 0.0338 REMARK 3 L33: 0.0071 L12: -0.0178 REMARK 3 L13: -0.0014 L23: 0.0072 REMARK 3 S TENSOR REMARK 3 S11: -0.3499 S12: -0.1858 S13: 0.1484 REMARK 3 S21: -0.2030 S22: 0.1149 S23: 0.3118 REMARK 3 S31: -0.2279 S32: 0.0995 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6SH7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1292103698. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000041 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39975 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 46.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 13.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 13.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5XDR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CARBOXYLIC ACIDS, 0.1 M REMARK 280 BICINE/TRIS PH 8.5, 12.5% W/V PEG 1000, 12.5% W/V PEG 3350, 12.5% REMARK 280 V/V MPD, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.94250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 106.94250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 41.12150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.01200 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 41.12150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.01200 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 106.94250 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 41.12150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 45.01200 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 106.94250 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 41.12150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 45.01200 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 834 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 107 REMARK 465 PRO A 108 REMARK 465 LEU A 376 REMARK 465 GLY A 377 REMARK 465 PRO A 378 REMARK 465 GLU A 379 REMARK 465 VAL A 380 REMARK 465 GLY A 381 REMARK 465 ASP A 382 REMARK 465 ILE A 383 REMARK 465 PRO A 406 REMARK 465 LYS A 407 REMARK 465 LYS A 408 REMARK 465 GLN A 409 REMARK 465 ASN A 410 REMARK 465 GLY A 411 REMARK 465 ASP A 431 REMARK 465 GLY A 432 REMARK 465 LYS A 790 REMARK 465 GLU A 791 REMARK 465 TYR A 792 REMARK 465 SER A 793 REMARK 465 GLN A 794 REMARK 465 TYR A 795 REMARK 465 GLY B 537 REMARK 465 PRO B 538 REMARK 465 HIS B 539 REMARK 465 MET B 540 REMARK 465 ALA B 541 REMARK 465 GLU B 542 REMARK 465 GLU B 543 REMARK 465 ALA B 544 REMARK 465 TYR B 545 REMARK 465 LYS B 546 REMARK 465 GLN B 547 REMARK 465 GLN B 548 REMARK 465 ILE B 549 REMARK 465 LYS B 550 REMARK 465 ARG B 597 REMARK 465 VAL B 598 REMARK 465 ASN B 599 REMARK 465 LYS B 600 REMARK 465 ILE B 601 REMARK 465 ALA B 602 REMARK 465 LYS B 603 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 114 59.82 -68.94 REMARK 500 GLN A 215 -113.63 -93.37 REMARK 500 GLU A 224 93.88 -160.61 REMARK 500 CYS A 226 70.13 -101.55 REMARK 500 PHE A 304 39.47 -90.87 REMARK 500 ARG A 315 67.33 -114.72 REMARK 500 THR A 426 -21.27 -143.41 REMARK 500 ARG A 475 -70.28 -83.05 REMARK 500 LEU A 484 49.56 -81.69 REMARK 500 GLU A 493 -33.80 -131.31 REMARK 500 ARG A 504 37.45 -153.75 REMARK 500 CYS A 583 33.77 -144.94 REMARK 500 ALA A 606 54.23 -149.43 REMARK 500 GLN A 700 72.90 -113.80 REMARK 500 LYS A 714 -65.73 63.19 REMARK 500 THR A 742 -135.82 -115.09 REMARK 500 THR A 749 83.93 59.51 REMARK 500 CYS A 774 -162.32 -114.21 REMARK 500 LYS B 587 -124.63 58.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6SH6 RELATED DB: PDB DBREF 6SH7 A 113 795 UNP O43143 DHX15_HUMAN 113 795 DBREF 6SH7 B 541 603 UNP O15226 NKRF_HUMAN 541 603 SEQADV 6SH7 GLY A 107 UNP O43143 EXPRESSION TAG SEQADV 6SH7 PRO A 108 UNP O43143 EXPRESSION TAG SEQADV 6SH7 HIS A 109 UNP O43143 EXPRESSION TAG SEQADV 6SH7 MET A 110 UNP O43143 EXPRESSION TAG SEQADV 6SH7 LEU A 111 UNP O43143 EXPRESSION TAG SEQADV 6SH7 GLU A 112 UNP O43143 EXPRESSION TAG SEQADV 6SH7 GLY B 537 UNP O15226 EXPRESSION TAG SEQADV 6SH7 PRO B 538 UNP O15226 EXPRESSION TAG SEQADV 6SH7 HIS B 539 UNP O15226 EXPRESSION TAG SEQADV 6SH7 MET B 540 UNP O15226 EXPRESSION TAG SEQRES 1 A 689 GLY PRO HIS MET LEU GLU GLN CYS ILE ASN PRO PHE THR SEQRES 2 A 689 ASN LEU PRO HIS THR PRO ARG TYR TYR ASP ILE LEU LYS SEQRES 3 A 689 LYS ARG LEU GLN LEU PRO VAL TRP GLU TYR LYS ASP ARG SEQRES 4 A 689 PHE THR ASP ILE LEU VAL ARG HIS GLN SER PHE VAL LEU SEQRES 5 A 689 VAL GLY GLU THR GLY SER GLY LYS THR THR GLN ILE PRO SEQRES 6 A 689 GLN TRP CYS VAL GLU TYR MET ARG SER LEU PRO GLY PRO SEQRES 7 A 689 LYS ARG GLY VAL ALA CYS THR GLN PRO ARG ARG VAL ALA SEQRES 8 A 689 ALA MET SER VAL ALA GLN ARG VAL ALA ASP GLU MET ASP SEQRES 9 A 689 VAL MET LEU GLY GLN GLU VAL GLY TYR SER ILE ARG PHE SEQRES 10 A 689 GLU ASP CYS SER SER ALA LYS THR ILE LEU LYS TYR MET SEQRES 11 A 689 THR ASP GLY MET LEU LEU ARG GLU ALA MET ASN ASP PRO SEQRES 12 A 689 LEU LEU GLU ARG TYR GLY VAL ILE ILE LEU ASP GLU ALA SEQRES 13 A 689 HIS GLU ARG THR LEU ALA THR ASP ILE LEU MET GLY VAL SEQRES 14 A 689 LEU LYS GLU VAL VAL ARG GLN ARG SER ASP LEU LYS VAL SEQRES 15 A 689 ILE VAL MET SER ALA THR LEU ASP ALA GLY LYS PHE GLN SEQRES 16 A 689 ILE TYR PHE ASP ASN CYS PRO LEU LEU THR ILE PRO GLY SEQRES 17 A 689 ARG THR HIS PRO VAL GLU ILE PHE TYR THR PRO GLU PRO SEQRES 18 A 689 GLU ARG ASP TYR LEU GLU ALA ALA ILE ARG THR VAL ILE SEQRES 19 A 689 GLN ILE HIS MET CYS GLU GLU GLU GLU GLY ASP LEU LEU SEQRES 20 A 689 LEU PHE LEU THR GLY GLN GLU GLU ILE ASP GLU ALA CYS SEQRES 21 A 689 LYS ARG ILE LYS ARG GLU VAL ASP ASP LEU GLY PRO GLU SEQRES 22 A 689 VAL GLY ASP ILE LYS ILE ILE PRO LEU TYR SER THR LEU SEQRES 23 A 689 PRO PRO GLN GLN GLN GLN ARG ILE PHE GLU PRO PRO PRO SEQRES 24 A 689 PRO LYS LYS GLN ASN GLY ALA ILE GLY ARG LYS VAL VAL SEQRES 25 A 689 VAL SER THR ASN ILE ALA GLU THR SER LEU THR ILE ASP SEQRES 26 A 689 GLY VAL VAL PHE VAL ILE ASP PRO GLY PHE ALA LYS GLN SEQRES 27 A 689 LYS VAL TYR ASN PRO ARG ILE ARG VAL GLU SER LEU LEU SEQRES 28 A 689 VAL THR ALA ILE SER LYS ALA SER ALA GLN GLN ARG ALA SEQRES 29 A 689 GLY ARG ALA GLY ARG THR ARG PRO GLY LYS CYS PHE ARG SEQRES 30 A 689 LEU TYR THR GLU LYS ALA TYR LYS THR GLU MET GLN ASP SEQRES 31 A 689 ASN THR TYR PRO GLU ILE LEU ARG SER ASN LEU GLY SER SEQRES 32 A 689 VAL VAL LEU GLN LEU LYS LYS LEU GLY ILE ASP ASP LEU SEQRES 33 A 689 VAL HIS PHE ASP PHE MET ASP PRO PRO ALA PRO GLU THR SEQRES 34 A 689 LEU MET ARG ALA LEU GLU LEU LEU ASN TYR LEU ALA ALA SEQRES 35 A 689 LEU ASN ASP ASP GLY ASP LEU THR GLU LEU GLY SER MET SEQRES 36 A 689 MET ALA GLU PHE PRO LEU ASP PRO GLN LEU ALA LYS MET SEQRES 37 A 689 VAL ILE ALA SER CYS ASP TYR ASN CYS SER ASN GLU VAL SEQRES 38 A 689 LEU SER ILE THR ALA MET LEU SER VAL PRO GLN CYS PHE SEQRES 39 A 689 VAL ARG PRO THR GLU ALA LYS LYS ALA ALA ASP GLU ALA SEQRES 40 A 689 LYS MET ARG PHE ALA HIS ILE ASP GLY ASP HIS LEU THR SEQRES 41 A 689 LEU LEU ASN VAL TYR HIS ALA PHE LYS GLN ASN HIS GLU SEQRES 42 A 689 SER VAL GLN TRP CYS TYR ASP ASN PHE ILE ASN TYR ARG SEQRES 43 A 689 SER LEU MET SER ALA ASP ASN VAL ARG GLN GLN LEU SER SEQRES 44 A 689 ARG ILE MET ASP ARG PHE ASN LEU PRO ARG ARG SER THR SEQRES 45 A 689 ASP PHE THR SER ARG ASP TYR TYR ILE ASN ILE ARG LYS SEQRES 46 A 689 ALA LEU VAL THR GLY TYR PHE MET GLN VAL ALA HIS LEU SEQRES 47 A 689 GLU ARG THR GLY HIS TYR LEU THR VAL LYS ASP ASN GLN SEQRES 48 A 689 VAL VAL GLN LEU HIS PRO SER THR VAL LEU ASP HIS LYS SEQRES 49 A 689 PRO GLU TRP VAL LEU TYR ASN GLU PHE VAL LEU THR THR SEQRES 50 A 689 LYS ASN TYR ILE ARG THR CYS THR ASP ILE LYS PRO GLU SEQRES 51 A 689 TRP LEU VAL LYS ILE ALA PRO GLN TYR TYR ASP MET SER SEQRES 52 A 689 ASN PHE PRO GLN CYS GLU ALA LYS ARG GLN LEU ASP ARG SEQRES 53 A 689 ILE ILE ALA LYS LEU GLN SER LYS GLU TYR SER GLN TYR SEQRES 1 B 67 GLY PRO HIS MET ALA GLU GLU ALA TYR LYS GLN GLN ILE SEQRES 2 B 67 LYS GLU ASP ASN ILE GLY ASN GLN LEU LEU ARG LYS MET SEQRES 3 B 67 GLY TRP THR GLY GLY GLY LEU GLY LYS SER GLY GLU GLY SEQRES 4 B 67 ILE ARG GLU PRO ILE SER VAL LYS GLU GLN HIS LYS ARG SEQRES 5 B 67 GLU GLY LEU GLY LEU ASP VAL GLU ARG VAL ASN LYS ILE SEQRES 6 B 67 ALA LYS FORMUL 3 HOH *34(H2 O) HELIX 1 1 PRO A 125 ARG A 134 1 10 HELIX 2 2 LYS A 143 LEU A 150 1 8 HELIX 3 3 LYS A 166 SER A 180 1 15 HELIX 4 4 ARG A 195 GLU A 208 1 14 HELIX 5 5 ASP A 238 ASN A 247 1 10 HELIX 6 6 LEU A 267 VAL A 279 1 13 HELIX 7 7 LYS A 299 TYR A 303 1 5 HELIX 8 8 TYR A 331 CYS A 345 1 15 HELIX 9 9 GLN A 359 ASP A 374 1 16 HELIX 10 10 PRO A 394 GLN A 397 1 4 HELIX 11 11 ILE A 423 THR A 426 1 4 HELIX 12 12 LYS A 463 GLY A 471 1 9 HELIX 13 13 GLU A 487 THR A 492 1 6 HELIX 14 14 GLY A 508 LEU A 517 1 10 HELIX 15 15 PRO A 533 TYR A 545 1 13 HELIX 16 16 GLU A 557 ALA A 563 1 7 HELIX 17 17 PRO A 569 ALA A 577 1 9 HELIX 18 18 SER A 584 LEU A 594 1 11 HELIX 19 19 LYS A 607 LYS A 614 1 8 HELIX 20 20 ASP A 623 GLN A 636 1 14 HELIX 21 21 VAL A 641 ASP A 646 1 6 HELIX 22 22 TYR A 651 ARG A 670 1 20 HELIX 23 23 ASP A 684 TYR A 697 1 14 HELIX 24 24 PRO A 755 ILE A 761 1 7 HELIX 25 25 GLU A 775 LEU A 787 1 13 HELIX 26 26 ILE B 554 ARG B 560 1 7 SHEET 1 1 1 SER A 155 GLY A 160 0 SHEET 1 2 1 GLY A 187 GLN A 192 0 SHEET 1 3 1 VAL A 217 ILE A 221 0 SHEET 1 4 1 GLU A 224 CYS A 226 0 SHEET 1 5 1 LEU A 233 THR A 237 0 SHEET 1 6 1 TYR A 254 LEU A 259 0 SHEET 1 7 1 LYS A 287 SER A 292 0 SHEET 1 8 1 LEU A 309 ILE A 312 0 SHEET 1 9 1 VAL A 319 TYR A 323 0 SHEET 1 10 1 LEU A 352 PHE A 355 0 SHEET 1 11 1 ILE A 385 LEU A 388 0 SHEET 1 12 1 VAL A 417 SER A 420 0 SHEET 1 13 1 PHE A 435 ASP A 438 0 SHEET 1 14 1 PHE A 441 ASN A 448 0 SHEET 1 15 1 VAL A 453 ALA A 460 0 SHEET 1 16 1 GLY A 479 ARG A 483 0 SHEET 1 17 1 VAL A 701 LEU A 704 0 SHEET 1 18 1 TYR A 710 THR A 712 0 SHEET 1 19 1 VAL A 718 LEU A 721 0 SHEET 1 20 1 TRP A 733 LEU A 741 0 SHEET 1 21 1 ASN A 745 ASP A 752 0 CRYST1 82.243 90.024 213.885 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012159 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011108 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004675 0.00000