HEADER SIGNALING PROTEIN 06-AUG-19 6SHC TITLE CRYSTAL STRUCTURE OF HUMAN IRE1 LUMINAL DOMAIN Q105C COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ENDOPLASMIC RETICULUM-TO-NUCLEUS SIGNALING 1,INOSITOL- COMPND 5 REQUIRING PROTEIN 1,HIRE1P,IRE1-ALPHA,IRE1A; COMPND 6 EC: 2.7.11.1,3.1.26.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: FOUR MUTATIONS HAS BEEN INTRODUCED INTO THE CONSTRUCT: COMPND 10 Q105C, C109S, C148S, C332S. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ERN1, IRE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ORIGAMI B KEYWDS IRE1, UNFOLDED PROTEIN RESPONSE, ER STRESS, PROTEIN QUALITY CONTROL, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.YAN,D.RON REVDAT 2 24-JAN-24 6SHC 1 REMARK REVDAT 1 08-JAN-20 6SHC 0 JRNL AUTH N.AMIN-WETZEL,L.NEIDHARDT,Y.YAN,M.P.MAYER,D.RON JRNL TITL UNSTRUCTURED REGIONS IN IRE1 ALPHA SPECIFY BIP-MEDIATED JRNL TITL 2 DESTABILISATION OF THE LUMINAL DOMAIN DIMER AND REPRESSION JRNL TITL 3 OF THE UPR. JRNL REF ELIFE V. 8 2019 JRNL REFN ESSN 2050-084X JRNL PMID 31873072 JRNL DOI 10.7554/ELIFE.50793 REMARK 2 REMARK 2 RESOLUTION. 3.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 8554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.324 REMARK 3 R VALUE (WORKING SET) : 0.323 REMARK 3 FREE R VALUE : 0.332 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 443 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 54.7900 - 5.1200 1.00 2812 167 0.3283 0.3229 REMARK 3 2 5.1200 - 4.0600 1.00 2660 135 0.2940 0.3296 REMARK 3 3 4.0600 - 3.5500 1.00 2639 141 0.3646 0.3862 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.692 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 42.638 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 143.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 126.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 1830 REMARK 3 ANGLE : 0.606 2538 REMARK 3 CHIRALITY : 0.043 307 REMARK 3 PLANARITY : 0.006 331 REMARK 3 DIHEDRAL : 2.660 1044 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6SHC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1292103700. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.916 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 8590 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.550 REMARK 200 RESOLUTION RANGE LOW (A) : 91.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 19.30 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.89 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 2.24200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2HZ6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 9% MPD, 0.1M HEPES PH7.5, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.63267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 22.81633 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.22450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 11.40817 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.04083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.63267 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 22.81633 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 11.40817 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 34.22450 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 57.04083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 34.22450 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 24 REMARK 465 THR A 25 REMARK 465 VAL A 26 REMARK 465 THR A 27 REMARK 465 LEU A 28 REMARK 465 GLY A 86 REMARK 465 SER A 87 REMARK 465 LYS A 88 REMARK 465 ASN A 89 REMARK 465 ASN A 90 REMARK 465 GLY A 133 REMARK 465 GLU A 134 REMARK 465 LYS A 135 REMARK 465 GLN A 136 REMARK 465 GLN A 137 REMARK 465 THR A 138 REMARK 465 LEU A 139 REMARK 465 SER A 140 REMARK 465 SER A 141 REMARK 465 ALA A 142 REMARK 465 PHE A 143 REMARK 465 ALA A 144 REMARK 465 ASP A 145 REMARK 465 SER A 146 REMARK 465 LEU A 147 REMARK 465 ARG A 309 REMARK 465 GLY A 310 REMARK 465 SER A 311 REMARK 465 THR A 312 REMARK 465 LEU A 313 REMARK 465 PRO A 314 REMARK 465 LEU A 315 REMARK 465 LEU A 316 REMARK 465 GLU A 317 REMARK 465 GLY A 318 REMARK 465 PRO A 319 REMARK 465 GLN A 320 REMARK 465 THR A 321 REMARK 465 ASP A 322 REMARK 465 GLY A 323 REMARK 465 VAL A 324 REMARK 465 THR A 325 REMARK 465 ILE A 326 REMARK 465 GLY A 327 REMARK 465 ASP A 328 REMARK 465 LYS A 329 REMARK 465 GLY A 330 REMARK 465 GLU A 331 REMARK 465 SER A 332 REMARK 465 VAL A 333 REMARK 465 ILE A 334 REMARK 465 THR A 335 REMARK 465 PRO A 336 REMARK 465 SER A 337 REMARK 465 THR A 338 REMARK 465 ASP A 339 REMARK 465 VAL A 340 REMARK 465 LYS A 341 REMARK 465 PHE A 342 REMARK 465 ASP A 343 REMARK 465 PRO A 344 REMARK 465 GLY A 345 REMARK 465 LEU A 346 REMARK 465 LYS A 347 REMARK 465 SER A 348 REMARK 465 LYS A 349 REMARK 465 ASN A 350 REMARK 465 LYS A 351 REMARK 465 LEU A 352 REMARK 465 ASN A 353 REMARK 465 TYR A 354 REMARK 465 LEU A 355 REMARK 465 LEU A 369 REMARK 465 SER A 370 REMARK 465 ALA A 371 REMARK 465 SER A 372 REMARK 465 THR A 373 REMARK 465 LYS A 374 REMARK 465 MET A 375 REMARK 465 LEU A 376 REMARK 465 GLU A 377 REMARK 465 ARG A 378 REMARK 465 PHE A 379 REMARK 465 PRO A 380 REMARK 465 ASN A 381 REMARK 465 ASN A 382 REMARK 465 LEU A 383 REMARK 465 PRO A 384 REMARK 465 LYS A 385 REMARK 465 HIS A 386 REMARK 465 ARG A 387 REMARK 465 GLU A 388 REMARK 465 ASN A 389 REMARK 465 VAL A 390 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 29 CG CD REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 THR A 31 OG1 CG2 REMARK 470 LEU A 32 CG CD1 CD2 REMARK 470 PHE A 34 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL A 35 CG1 CG2 REMARK 470 LEU A 38 CG CD1 CD2 REMARK 470 SER A 46 OG REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 ARG A 48 CG CD NE CZ NH1 NH2 REMARK 470 THR A 49 OG1 CG2 REMARK 470 LYS A 53 CG CD CE NZ REMARK 470 LEU A 56 CG CD1 CD2 REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 LEU A 62 CG CD1 CD2 REMARK 470 THR A 66 OG1 CG2 REMARK 470 HIS A 67 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 69 CG CD OE1 OE2 REMARK 470 PHE A 73 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN A 78 CG OD1 ND2 REMARK 470 LEU A 85 CG CD1 CD2 REMARK 470 GLU A 91 CG CD OE1 OE2 REMARK 470 LEU A 93 CG CD1 CD2 REMARK 470 ILE A 100 CG1 CG2 CD1 REMARK 470 SER A 107 OG REMARK 470 ARG A 110 CG CD NE CZ NH1 NH2 REMARK 470 SER A 111 OG REMARK 470 SER A 112 OG REMARK 470 ASP A 113 CG OD1 OD2 REMARK 470 ILE A 115 CG1 CG2 CD1 REMARK 470 LEU A 116 CG CD1 CD2 REMARK 470 TYR A 117 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET A 118 CG SD CE REMARK 470 LYS A 121 CG CD CE NZ REMARK 470 GLN A 122 CG CD OE1 NE2 REMARK 470 ILE A 124 CG1 CG2 CD1 REMARK 470 ILE A 128 CG1 CG2 CD1 REMARK 470 ASP A 129 CG OD1 OD2 REMARK 470 LEU A 130 CG CD1 CD2 REMARK 470 LEU A 131 CG CD1 CD2 REMARK 470 THR A 132 OG1 CG2 REMARK 470 LEU A 153 CG CD1 CD2 REMARK 470 LEU A 154 CG CD1 CD2 REMARK 470 TYR A 155 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 156 CG CD1 CD2 REMARK 470 ARG A 158 CG CD NE CZ NH1 NH2 REMARK 470 MET A 165 CG SD CE REMARK 470 TYR A 166 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 167 CG OD1 OD2 REMARK 470 THR A 168 OG1 CG2 REMARK 470 LYS A 169 CG CD CE NZ REMARK 470 THR A 170 OG1 CG2 REMARK 470 ARG A 171 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 LEU A 173 CG CD1 CD2 REMARK 470 ARG A 174 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 186 CG CD1 CD2 REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 ASP A 189 CG OD1 OD2 REMARK 470 ASP A 190 CG OD1 OD2 REMARK 470 VAL A 191 CB CG1 CG2 REMARK 470 ASP A 192 CG OD1 OD2 REMARK 470 LYS A 194 CG CD CE NZ REMARK 470 ASN A 201 CG OD1 ND2 REMARK 470 THR A 208 OG1 CG2 REMARK 470 SER A 211 OG REMARK 470 GLU A 212 CG CD OE1 OE2 REMARK 470 SER A 213 OG REMARK 470 VAL A 216 CG1 CG2 REMARK 470 LEU A 217 CG CD1 CD2 REMARK 470 ILE A 219 CG1 CG2 CD1 REMARK 470 ASN A 221 CG OD1 ND2 REMARK 470 SER A 224 OG REMARK 470 VAL A 231 CG1 CG2 REMARK 470 TRP A 232 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 232 CZ3 CH2 REMARK 470 GLN A 233 CG CD OE1 NE2 REMARK 470 ARG A 234 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 235 CG CD OE1 OE2 REMARK 470 ARG A 238 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 239 CG CD CE NZ REMARK 470 MET A 241 CG SD CE REMARK 470 ASN A 244 CG OD1 ND2 REMARK 470 VAL A 247 CG1 CG2 REMARK 470 ARG A 251 CG CD NE CZ NH1 NH2 REMARK 470 PHE A 255 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 259 CG CD OE1 OE2 REMARK 470 VAL A 260 CG1 CG2 REMARK 470 ARG A 262 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 263 CG1 CG2 CD1 REMARK 470 LYS A 265 CG CD CE NZ REMARK 470 TRP A 266 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 266 CZ3 CH2 REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 PHE A 270 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 272 CG CD CE NZ REMARK 470 GLU A 273 CG CD OE1 OE2 REMARK 470 GLU A 275 CG CD OE1 OE2 REMARK 470 LYS A 277 CG CD CE NZ REMARK 470 SER A 278 OG REMARK 470 LYS A 279 CG CD CE NZ REMARK 470 LEU A 280 CG CD1 CD2 REMARK 470 THR A 283 OG1 CG2 REMARK 470 LYS A 288 CG CD CE NZ REMARK 470 HIS A 301 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 302 CG CD OE1 OE2 REMARK 470 ARG A 356 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 357 CG OD1 ND2 REMARK 470 LEU A 360 CG CD1 CD2 REMARK 470 LEU A 361 CG CD1 CD2 REMARK 470 GLU A 366 CG CD OE1 OE2 REMARK 470 THR A 367 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 69 -70.12 -65.46 REMARK 500 ALA A 72 -52.34 -128.29 REMARK 500 ASP A 79 -34.23 -132.02 REMARK 500 ASN A 176 140.15 -176.45 REMARK 500 REMARK 500 REMARK: NULL DBREF 6SHC A 24 390 UNP O75460 ERN1_HUMAN 24 390 SEQADV 6SHC CYS A 105 UNP O75460 GLN 105 ENGINEERED MUTATION SEQADV 6SHC SER A 109 UNP O75460 CYS 109 ENGINEERED MUTATION SEQADV 6SHC SER A 148 UNP O75460 CYS 148 ENGINEERED MUTATION SEQADV 6SHC SER A 332 UNP O75460 CYS 332 ENGINEERED MUTATION SEQRES 1 A 367 SER THR VAL THR LEU PRO GLU THR LEU LEU PHE VAL SER SEQRES 2 A 367 THR LEU ASP GLY SER LEU HIS ALA VAL SER LYS ARG THR SEQRES 3 A 367 GLY SER ILE LYS TRP THR LEU LYS GLU ASP PRO VAL LEU SEQRES 4 A 367 GLN VAL PRO THR HIS VAL GLU GLU PRO ALA PHE LEU PRO SEQRES 5 A 367 ASP PRO ASN ASP GLY SER LEU TYR THR LEU GLY SER LYS SEQRES 6 A 367 ASN ASN GLU GLY LEU THR LYS LEU PRO PHE THR ILE PRO SEQRES 7 A 367 GLU LEU VAL CYS ALA SER PRO SER ARG SER SER ASP GLY SEQRES 8 A 367 ILE LEU TYR MET GLY LYS LYS GLN ASP ILE TRP TYR VAL SEQRES 9 A 367 ILE ASP LEU LEU THR GLY GLU LYS GLN GLN THR LEU SER SEQRES 10 A 367 SER ALA PHE ALA ASP SER LEU SER PRO SER THR SER LEU SEQRES 11 A 367 LEU TYR LEU GLY ARG THR GLU TYR THR ILE THR MET TYR SEQRES 12 A 367 ASP THR LYS THR ARG GLU LEU ARG TRP ASN ALA THR TYR SEQRES 13 A 367 PHE ASP TYR ALA ALA SER LEU PRO GLU ASP ASP VAL ASP SEQRES 14 A 367 TYR LYS MET SER HIS PHE VAL SER ASN GLY ASP GLY LEU SEQRES 15 A 367 VAL VAL THR VAL ASP SER GLU SER GLY ASP VAL LEU TRP SEQRES 16 A 367 ILE GLN ASN TYR ALA SER PRO VAL VAL ALA PHE TYR VAL SEQRES 17 A 367 TRP GLN ARG GLU GLY LEU ARG LYS VAL MET HIS ILE ASN SEQRES 18 A 367 VAL ALA VAL GLU THR LEU ARG TYR LEU THR PHE MET SER SEQRES 19 A 367 GLY GLU VAL GLY ARG ILE THR LYS TRP LYS TYR PRO PHE SEQRES 20 A 367 PRO LYS GLU THR GLU ALA LYS SER LYS LEU THR PRO THR SEQRES 21 A 367 LEU TYR VAL GLY LYS TYR SER THR SER LEU TYR ALA SER SEQRES 22 A 367 PRO SER MET VAL HIS GLU GLY VAL ALA VAL VAL PRO ARG SEQRES 23 A 367 GLY SER THR LEU PRO LEU LEU GLU GLY PRO GLN THR ASP SEQRES 24 A 367 GLY VAL THR ILE GLY ASP LYS GLY GLU SER VAL ILE THR SEQRES 25 A 367 PRO SER THR ASP VAL LYS PHE ASP PRO GLY LEU LYS SER SEQRES 26 A 367 LYS ASN LYS LEU ASN TYR LEU ARG ASN TYR TRP LEU LEU SEQRES 27 A 367 ILE GLY HIS HIS GLU THR PRO LEU SER ALA SER THR LYS SEQRES 28 A 367 MET LEU GLU ARG PHE PRO ASN ASN LEU PRO LYS HIS ARG SEQRES 29 A 367 GLU ASN VAL HELIX 1 AA1 PRO A 65 GLU A 70 1 6 HELIX 2 AA2 THR A 99 SER A 107 1 9 HELIX 3 AA3 VAL A 247 LYS A 265 1 19 HELIX 4 AA4 LYS A 272 LEU A 280 1 9 HELIX 5 AA5 ASN A 357 ILE A 362 1 6 SHEET 1 AA1 5 ILE A 52 LYS A 57 0 SHEET 2 AA1 5 SER A 41 SER A 46 -1 N ALA A 44 O LYS A 53 SHEET 3 AA1 5 LEU A 32 THR A 37 -1 N LEU A 33 O VAL A 45 SHEET 4 AA1 5 VAL A 226 TRP A 232 -1 O VAL A 227 N SER A 36 SHEET 5 AA1 5 LEU A 237 VAL A 240 -1 O VAL A 240 N PHE A 229 SHEET 1 AA2 5 LEU A 62 GLN A 63 0 SHEET 2 AA2 5 LEU A 173 TYR A 182 -1 O THR A 178 N GLN A 63 SHEET 3 AA2 5 LEU A 154 TYR A 166 -1 N MET A 165 O TRP A 175 SHEET 4 AA2 5 LEU A 116 ILE A 128 -1 N TYR A 126 O LEU A 156 SHEET 5 AA2 5 SER A 109 ARG A 110 -1 N SER A 109 O TYR A 117 SHEET 1 AA3 3 PHE A 73 PRO A 75 0 SHEET 2 AA3 3 LEU A 82 THR A 84 -1 O TYR A 83 N LEU A 74 SHEET 3 AA3 3 THR A 94 LYS A 95 -1 O THR A 94 N THR A 84 SHEET 1 AA4 4 VAL A 216 ASN A 221 0 SHEET 2 AA4 4 LEU A 205 ASP A 210 -1 N VAL A 206 O GLN A 220 SHEET 3 AA4 4 MET A 195 ASN A 201 -1 N PHE A 198 O VAL A 207 SHEET 4 AA4 4 ILE A 243 ALA A 246 1 O VAL A 245 N VAL A 199 SHEET 1 AA5 3 LEU A 293 VAL A 300 0 SHEET 2 AA5 3 THR A 281 LYS A 288 -1 N THR A 283 O SER A 298 SHEET 3 AA5 3 GLY A 363 HIS A 365 -1 O HIS A 365 N LEU A 284 SSBOND 1 CYS A 105 CYS A 105 1555 11555 2.03 CISPEP 1 SER A 107 PRO A 108 0 8.47 CRYST1 182.772 182.772 68.449 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005471 0.003159 0.000000 0.00000 SCALE2 0.000000 0.006318 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014609 0.00000