data_6SHS # _entry.id 6SHS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6SHS pdb_00006shs 10.2210/pdb6shs/pdb WWPDB D_1292103770 ? ? EMDB EMD-10204 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-11-06 2 'Structure model' 1 1 2024-05-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6SHS _pdbx_database_status.recvd_initial_deposition_date 2019-08-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB . EMD-4864 'other EM volume' EMDB . EMD-4866 'other EM volume' EMDB 'Abeta fibril (Morphology I)' EMD-10204 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kollmer, M.' 1 ? 'Fandrich, M.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 10 _citation.language ? _citation.page_first 4760 _citation.page_last 4760 _citation.title ;Cryo-EM structure and polymorphism of A beta amyloid fibrils purified from Alzheimer's brain tissue. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-019-12683-8 _citation.pdbx_database_id_PubMed 31664019 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kollmer, M.' 1 0000-0001-9551-6357 primary 'Close, W.' 2 ? primary 'Funk, L.' 3 ? primary 'Rasmussen, J.' 4 0000-0001-6905-745X primary 'Bsoul, A.' 5 ? primary 'Schierhorn, A.' 6 ? primary 'Schmidt, M.' 7 ? primary 'Sigurdson, C.J.' 8 ? primary 'Jucker, M.' 9 0000-0001-9045-1072 primary 'Fandrich, M.' 10 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Amyloid-beta precursor protein' _entity.formula_weight 4335.852 _entity.pdbx_number_of_molecules 12 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;APP,ABPP,APPI,Alzheimer disease amyloid protein,Amyloid precursor protein,Amyloid-beta A4 protein,Cerebral vascular amyloid peptide,CVAP,PreA4,Protease nexin-II,PN-II ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV _entity_poly.pdbx_seq_one_letter_code_can DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV _entity_poly.pdbx_strand_id A,B,C,H,D,I,E,J,F,K,G,L _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASP n 1 2 ALA n 1 3 GLU n 1 4 PHE n 1 5 ARG n 1 6 HIS n 1 7 ASP n 1 8 SER n 1 9 GLY n 1 10 TYR n 1 11 GLU n 1 12 VAL n 1 13 HIS n 1 14 HIS n 1 15 GLN n 1 16 LYS n 1 17 LEU n 1 18 VAL n 1 19 PHE n 1 20 PHE n 1 21 ALA n 1 22 GLU n 1 23 ASP n 1 24 VAL n 1 25 GLY n 1 26 SER n 1 27 ASN n 1 28 LYS n 1 29 GLY n 1 30 ALA n 1 31 ILE n 1 32 ILE n 1 33 GLY n 1 34 LEU n 1 35 MET n 1 36 VAL n 1 37 GLY n 1 38 GLY n 1 39 VAL n 1 40 VAL n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 40 _entity_src_nat.common_name Human _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue meninges _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ BRAIN _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASP 1 1 1 ASP ASP A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 GLU 11 11 11 GLU GLU A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 HIS 13 13 13 HIS HIS A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 GLN 15 15 15 GLN GLN A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 PHE 20 20 20 PHE PHE A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 MET 35 35 35 MET MET A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 VAL 40 40 40 VAL VAL A . n B 1 1 ASP 1 1 1 ASP ASP B . n B 1 2 ALA 2 2 2 ALA ALA B . n B 1 3 GLU 3 3 3 GLU GLU B . n B 1 4 PHE 4 4 4 PHE PHE B . n B 1 5 ARG 5 5 5 ARG ARG B . n B 1 6 HIS 6 6 6 HIS HIS B . n B 1 7 ASP 7 7 7 ASP ASP B . n B 1 8 SER 8 8 8 SER SER B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 TYR 10 10 10 TYR TYR B . n B 1 11 GLU 11 11 11 GLU GLU B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 HIS 13 13 13 HIS HIS B . n B 1 14 HIS 14 14 14 HIS HIS B . n B 1 15 GLN 15 15 15 GLN GLN B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 VAL 18 18 18 VAL VAL B . n B 1 19 PHE 19 19 19 PHE PHE B . n B 1 20 PHE 20 20 20 PHE PHE B . n B 1 21 ALA 21 21 21 ALA ALA B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 ASP 23 23 23 ASP ASP B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 GLY 25 25 25 GLY GLY B . n B 1 26 SER 26 26 26 SER SER B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 LYS 28 28 28 LYS LYS B . n B 1 29 GLY 29 29 29 GLY GLY B . n B 1 30 ALA 30 30 30 ALA ALA B . n B 1 31 ILE 31 31 31 ILE ILE B . n B 1 32 ILE 32 32 32 ILE ILE B . n B 1 33 GLY 33 33 33 GLY GLY B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 MET 35 35 35 MET MET B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 GLY 37 37 37 GLY GLY B . n B 1 38 GLY 38 38 38 GLY GLY B . n B 1 39 VAL 39 39 39 VAL VAL B . n B 1 40 VAL 40 40 40 VAL VAL B . n C 1 1 ASP 1 1 1 ASP ASP C . n C 1 2 ALA 2 2 2 ALA ALA C . n C 1 3 GLU 3 3 3 GLU GLU C . n C 1 4 PHE 4 4 4 PHE PHE C . n C 1 5 ARG 5 5 5 ARG ARG C . n C 1 6 HIS 6 6 6 HIS HIS C . n C 1 7 ASP 7 7 7 ASP ASP C . n C 1 8 SER 8 8 8 SER SER C . n C 1 9 GLY 9 9 9 GLY GLY C . n C 1 10 TYR 10 10 10 TYR TYR C . n C 1 11 GLU 11 11 11 GLU GLU C . n C 1 12 VAL 12 12 12 VAL VAL C . n C 1 13 HIS 13 13 13 HIS HIS C . n C 1 14 HIS 14 14 14 HIS HIS C . n C 1 15 GLN 15 15 15 GLN GLN C . n C 1 16 LYS 16 16 16 LYS LYS C . n C 1 17 LEU 17 17 17 LEU LEU C . n C 1 18 VAL 18 18 18 VAL VAL C . n C 1 19 PHE 19 19 19 PHE PHE C . n C 1 20 PHE 20 20 20 PHE PHE C . n C 1 21 ALA 21 21 21 ALA ALA C . n C 1 22 GLU 22 22 22 GLU GLU C . n C 1 23 ASP 23 23 23 ASP ASP C . n C 1 24 VAL 24 24 24 VAL VAL C . n C 1 25 GLY 25 25 25 GLY GLY C . n C 1 26 SER 26 26 26 SER SER C . n C 1 27 ASN 27 27 27 ASN ASN C . n C 1 28 LYS 28 28 28 LYS LYS C . n C 1 29 GLY 29 29 29 GLY GLY C . n C 1 30 ALA 30 30 30 ALA ALA C . n C 1 31 ILE 31 31 31 ILE ILE C . n C 1 32 ILE 32 32 32 ILE ILE C . n C 1 33 GLY 33 33 33 GLY GLY C . n C 1 34 LEU 34 34 34 LEU LEU C . n C 1 35 MET 35 35 35 MET MET C . n C 1 36 VAL 36 36 36 VAL VAL C . n C 1 37 GLY 37 37 37 GLY GLY C . n C 1 38 GLY 38 38 38 GLY GLY C . n C 1 39 VAL 39 39 39 VAL VAL C . n C 1 40 VAL 40 40 40 VAL VAL C . n D 1 1 ASP 1 1 1 ASP ASP H . n D 1 2 ALA 2 2 2 ALA ALA H . n D 1 3 GLU 3 3 3 GLU GLU H . n D 1 4 PHE 4 4 4 PHE PHE H . n D 1 5 ARG 5 5 5 ARG ARG H . n D 1 6 HIS 6 6 6 HIS HIS H . n D 1 7 ASP 7 7 7 ASP ASP H . n D 1 8 SER 8 8 8 SER SER H . n D 1 9 GLY 9 9 9 GLY GLY H . n D 1 10 TYR 10 10 10 TYR TYR H . n D 1 11 GLU 11 11 11 GLU GLU H . n D 1 12 VAL 12 12 12 VAL VAL H . n D 1 13 HIS 13 13 13 HIS HIS H . n D 1 14 HIS 14 14 14 HIS HIS H . n D 1 15 GLN 15 15 15 GLN GLN H . n D 1 16 LYS 16 16 16 LYS LYS H . n D 1 17 LEU 17 17 17 LEU LEU H . n D 1 18 VAL 18 18 18 VAL VAL H . n D 1 19 PHE 19 19 19 PHE PHE H . n D 1 20 PHE 20 20 20 PHE PHE H . n D 1 21 ALA 21 21 21 ALA ALA H . n D 1 22 GLU 22 22 22 GLU GLU H . n D 1 23 ASP 23 23 23 ASP ASP H . n D 1 24 VAL 24 24 24 VAL VAL H . n D 1 25 GLY 25 25 25 GLY GLY H . n D 1 26 SER 26 26 26 SER SER H . n D 1 27 ASN 27 27 27 ASN ASN H . n D 1 28 LYS 28 28 28 LYS LYS H . n D 1 29 GLY 29 29 29 GLY GLY H . n D 1 30 ALA 30 30 30 ALA ALA H . n D 1 31 ILE 31 31 31 ILE ILE H . n D 1 32 ILE 32 32 32 ILE ILE H . n D 1 33 GLY 33 33 33 GLY GLY H . n D 1 34 LEU 34 34 34 LEU LEU H . n D 1 35 MET 35 35 35 MET MET H . n D 1 36 VAL 36 36 36 VAL VAL H . n D 1 37 GLY 37 37 37 GLY GLY H . n D 1 38 GLY 38 38 38 GLY GLY H . n D 1 39 VAL 39 39 39 VAL VAL H . n D 1 40 VAL 40 40 40 VAL VAL H . n E 1 1 ASP 1 1 1 ASP ASP D . n E 1 2 ALA 2 2 2 ALA ALA D . n E 1 3 GLU 3 3 3 GLU GLU D . n E 1 4 PHE 4 4 4 PHE PHE D . n E 1 5 ARG 5 5 5 ARG ARG D . n E 1 6 HIS 6 6 6 HIS HIS D . n E 1 7 ASP 7 7 7 ASP ASP D . n E 1 8 SER 8 8 8 SER SER D . n E 1 9 GLY 9 9 9 GLY GLY D . n E 1 10 TYR 10 10 10 TYR TYR D . n E 1 11 GLU 11 11 11 GLU GLU D . n E 1 12 VAL 12 12 12 VAL VAL D . n E 1 13 HIS 13 13 13 HIS HIS D . n E 1 14 HIS 14 14 14 HIS HIS D . n E 1 15 GLN 15 15 15 GLN GLN D . n E 1 16 LYS 16 16 16 LYS LYS D . n E 1 17 LEU 17 17 17 LEU LEU D . n E 1 18 VAL 18 18 18 VAL VAL D . n E 1 19 PHE 19 19 19 PHE PHE D . n E 1 20 PHE 20 20 20 PHE PHE D . n E 1 21 ALA 21 21 21 ALA ALA D . n E 1 22 GLU 22 22 22 GLU GLU D . n E 1 23 ASP 23 23 23 ASP ASP D . n E 1 24 VAL 24 24 24 VAL VAL D . n E 1 25 GLY 25 25 25 GLY GLY D . n E 1 26 SER 26 26 26 SER SER D . n E 1 27 ASN 27 27 27 ASN ASN D . n E 1 28 LYS 28 28 28 LYS LYS D . n E 1 29 GLY 29 29 29 GLY GLY D . n E 1 30 ALA 30 30 30 ALA ALA D . n E 1 31 ILE 31 31 31 ILE ILE D . n E 1 32 ILE 32 32 32 ILE ILE D . n E 1 33 GLY 33 33 33 GLY GLY D . n E 1 34 LEU 34 34 34 LEU LEU D . n E 1 35 MET 35 35 35 MET MET D . n E 1 36 VAL 36 36 36 VAL VAL D . n E 1 37 GLY 37 37 37 GLY GLY D . n E 1 38 GLY 38 38 38 GLY GLY D . n E 1 39 VAL 39 39 39 VAL VAL D . n E 1 40 VAL 40 40 40 VAL VAL D . n F 1 1 ASP 1 1 1 ASP ASP I . n F 1 2 ALA 2 2 2 ALA ALA I . n F 1 3 GLU 3 3 3 GLU GLU I . n F 1 4 PHE 4 4 4 PHE PHE I . n F 1 5 ARG 5 5 5 ARG ARG I . n F 1 6 HIS 6 6 6 HIS HIS I . n F 1 7 ASP 7 7 7 ASP ASP I . n F 1 8 SER 8 8 8 SER SER I . n F 1 9 GLY 9 9 9 GLY GLY I . n F 1 10 TYR 10 10 10 TYR TYR I . n F 1 11 GLU 11 11 11 GLU GLU I . n F 1 12 VAL 12 12 12 VAL VAL I . n F 1 13 HIS 13 13 13 HIS HIS I . n F 1 14 HIS 14 14 14 HIS HIS I . n F 1 15 GLN 15 15 15 GLN GLN I . n F 1 16 LYS 16 16 16 LYS LYS I . n F 1 17 LEU 17 17 17 LEU LEU I . n F 1 18 VAL 18 18 18 VAL VAL I . n F 1 19 PHE 19 19 19 PHE PHE I . n F 1 20 PHE 20 20 20 PHE PHE I . n F 1 21 ALA 21 21 21 ALA ALA I . n F 1 22 GLU 22 22 22 GLU GLU I . n F 1 23 ASP 23 23 23 ASP ASP I . n F 1 24 VAL 24 24 24 VAL VAL I . n F 1 25 GLY 25 25 25 GLY GLY I . n F 1 26 SER 26 26 26 SER SER I . n F 1 27 ASN 27 27 27 ASN ASN I . n F 1 28 LYS 28 28 28 LYS LYS I . n F 1 29 GLY 29 29 29 GLY GLY I . n F 1 30 ALA 30 30 30 ALA ALA I . n F 1 31 ILE 31 31 31 ILE ILE I . n F 1 32 ILE 32 32 32 ILE ILE I . n F 1 33 GLY 33 33 33 GLY GLY I . n F 1 34 LEU 34 34 34 LEU LEU I . n F 1 35 MET 35 35 35 MET MET I . n F 1 36 VAL 36 36 36 VAL VAL I . n F 1 37 GLY 37 37 37 GLY GLY I . n F 1 38 GLY 38 38 38 GLY GLY I . n F 1 39 VAL 39 39 39 VAL VAL I . n F 1 40 VAL 40 40 40 VAL VAL I . n G 1 1 ASP 1 1 1 ASP ASP E . n G 1 2 ALA 2 2 2 ALA ALA E . n G 1 3 GLU 3 3 3 GLU GLU E . n G 1 4 PHE 4 4 4 PHE PHE E . n G 1 5 ARG 5 5 5 ARG ARG E . n G 1 6 HIS 6 6 6 HIS HIS E . n G 1 7 ASP 7 7 7 ASP ASP E . n G 1 8 SER 8 8 8 SER SER E . n G 1 9 GLY 9 9 9 GLY GLY E . n G 1 10 TYR 10 10 10 TYR TYR E . n G 1 11 GLU 11 11 11 GLU GLU E . n G 1 12 VAL 12 12 12 VAL VAL E . n G 1 13 HIS 13 13 13 HIS HIS E . n G 1 14 HIS 14 14 14 HIS HIS E . n G 1 15 GLN 15 15 15 GLN GLN E . n G 1 16 LYS 16 16 16 LYS LYS E . n G 1 17 LEU 17 17 17 LEU LEU E . n G 1 18 VAL 18 18 18 VAL VAL E . n G 1 19 PHE 19 19 19 PHE PHE E . n G 1 20 PHE 20 20 20 PHE PHE E . n G 1 21 ALA 21 21 21 ALA ALA E . n G 1 22 GLU 22 22 22 GLU GLU E . n G 1 23 ASP 23 23 23 ASP ASP E . n G 1 24 VAL 24 24 24 VAL VAL E . n G 1 25 GLY 25 25 25 GLY GLY E . n G 1 26 SER 26 26 26 SER SER E . n G 1 27 ASN 27 27 27 ASN ASN E . n G 1 28 LYS 28 28 28 LYS LYS E . n G 1 29 GLY 29 29 29 GLY GLY E . n G 1 30 ALA 30 30 30 ALA ALA E . n G 1 31 ILE 31 31 31 ILE ILE E . n G 1 32 ILE 32 32 32 ILE ILE E . n G 1 33 GLY 33 33 33 GLY GLY E . n G 1 34 LEU 34 34 34 LEU LEU E . n G 1 35 MET 35 35 35 MET MET E . n G 1 36 VAL 36 36 36 VAL VAL E . n G 1 37 GLY 37 37 37 GLY GLY E . n G 1 38 GLY 38 38 38 GLY GLY E . n G 1 39 VAL 39 39 39 VAL VAL E . n G 1 40 VAL 40 40 40 VAL VAL E . n H 1 1 ASP 1 1 1 ASP ASP J . n H 1 2 ALA 2 2 2 ALA ALA J . n H 1 3 GLU 3 3 3 GLU GLU J . n H 1 4 PHE 4 4 4 PHE PHE J . n H 1 5 ARG 5 5 5 ARG ARG J . n H 1 6 HIS 6 6 6 HIS HIS J . n H 1 7 ASP 7 7 7 ASP ASP J . n H 1 8 SER 8 8 8 SER SER J . n H 1 9 GLY 9 9 9 GLY GLY J . n H 1 10 TYR 10 10 10 TYR TYR J . n H 1 11 GLU 11 11 11 GLU GLU J . n H 1 12 VAL 12 12 12 VAL VAL J . n H 1 13 HIS 13 13 13 HIS HIS J . n H 1 14 HIS 14 14 14 HIS HIS J . n H 1 15 GLN 15 15 15 GLN GLN J . n H 1 16 LYS 16 16 16 LYS LYS J . n H 1 17 LEU 17 17 17 LEU LEU J . n H 1 18 VAL 18 18 18 VAL VAL J . n H 1 19 PHE 19 19 19 PHE PHE J . n H 1 20 PHE 20 20 20 PHE PHE J . n H 1 21 ALA 21 21 21 ALA ALA J . n H 1 22 GLU 22 22 22 GLU GLU J . n H 1 23 ASP 23 23 23 ASP ASP J . n H 1 24 VAL 24 24 24 VAL VAL J . n H 1 25 GLY 25 25 25 GLY GLY J . n H 1 26 SER 26 26 26 SER SER J . n H 1 27 ASN 27 27 27 ASN ASN J . n H 1 28 LYS 28 28 28 LYS LYS J . n H 1 29 GLY 29 29 29 GLY GLY J . n H 1 30 ALA 30 30 30 ALA ALA J . n H 1 31 ILE 31 31 31 ILE ILE J . n H 1 32 ILE 32 32 32 ILE ILE J . n H 1 33 GLY 33 33 33 GLY GLY J . n H 1 34 LEU 34 34 34 LEU LEU J . n H 1 35 MET 35 35 35 MET MET J . n H 1 36 VAL 36 36 36 VAL VAL J . n H 1 37 GLY 37 37 37 GLY GLY J . n H 1 38 GLY 38 38 38 GLY GLY J . n H 1 39 VAL 39 39 39 VAL VAL J . n H 1 40 VAL 40 40 40 VAL VAL J . n I 1 1 ASP 1 1 1 ASP ASP F . n I 1 2 ALA 2 2 2 ALA ALA F . n I 1 3 GLU 3 3 3 GLU GLU F . n I 1 4 PHE 4 4 4 PHE PHE F . n I 1 5 ARG 5 5 5 ARG ARG F . n I 1 6 HIS 6 6 6 HIS HIS F . n I 1 7 ASP 7 7 7 ASP ASP F . n I 1 8 SER 8 8 8 SER SER F . n I 1 9 GLY 9 9 9 GLY GLY F . n I 1 10 TYR 10 10 10 TYR TYR F . n I 1 11 GLU 11 11 11 GLU GLU F . n I 1 12 VAL 12 12 12 VAL VAL F . n I 1 13 HIS 13 13 13 HIS HIS F . n I 1 14 HIS 14 14 14 HIS HIS F . n I 1 15 GLN 15 15 15 GLN GLN F . n I 1 16 LYS 16 16 16 LYS LYS F . n I 1 17 LEU 17 17 17 LEU LEU F . n I 1 18 VAL 18 18 18 VAL VAL F . n I 1 19 PHE 19 19 19 PHE PHE F . n I 1 20 PHE 20 20 20 PHE PHE F . n I 1 21 ALA 21 21 21 ALA ALA F . n I 1 22 GLU 22 22 22 GLU GLU F . n I 1 23 ASP 23 23 23 ASP ASP F . n I 1 24 VAL 24 24 24 VAL VAL F . n I 1 25 GLY 25 25 25 GLY GLY F . n I 1 26 SER 26 26 26 SER SER F . n I 1 27 ASN 27 27 27 ASN ASN F . n I 1 28 LYS 28 28 28 LYS LYS F . n I 1 29 GLY 29 29 29 GLY GLY F . n I 1 30 ALA 30 30 30 ALA ALA F . n I 1 31 ILE 31 31 31 ILE ILE F . n I 1 32 ILE 32 32 32 ILE ILE F . n I 1 33 GLY 33 33 33 GLY GLY F . n I 1 34 LEU 34 34 34 LEU LEU F . n I 1 35 MET 35 35 35 MET MET F . n I 1 36 VAL 36 36 36 VAL VAL F . n I 1 37 GLY 37 37 37 GLY GLY F . n I 1 38 GLY 38 38 38 GLY GLY F . n I 1 39 VAL 39 39 39 VAL VAL F . n I 1 40 VAL 40 40 40 VAL VAL F . n J 1 1 ASP 1 1 1 ASP ASP K . n J 1 2 ALA 2 2 2 ALA ALA K . n J 1 3 GLU 3 3 3 GLU GLU K . n J 1 4 PHE 4 4 4 PHE PHE K . n J 1 5 ARG 5 5 5 ARG ARG K . n J 1 6 HIS 6 6 6 HIS HIS K . n J 1 7 ASP 7 7 7 ASP ASP K . n J 1 8 SER 8 8 8 SER SER K . n J 1 9 GLY 9 9 9 GLY GLY K . n J 1 10 TYR 10 10 10 TYR TYR K . n J 1 11 GLU 11 11 11 GLU GLU K . n J 1 12 VAL 12 12 12 VAL VAL K . n J 1 13 HIS 13 13 13 HIS HIS K . n J 1 14 HIS 14 14 14 HIS HIS K . n J 1 15 GLN 15 15 15 GLN GLN K . n J 1 16 LYS 16 16 16 LYS LYS K . n J 1 17 LEU 17 17 17 LEU LEU K . n J 1 18 VAL 18 18 18 VAL VAL K . n J 1 19 PHE 19 19 19 PHE PHE K . n J 1 20 PHE 20 20 20 PHE PHE K . n J 1 21 ALA 21 21 21 ALA ALA K . n J 1 22 GLU 22 22 22 GLU GLU K . n J 1 23 ASP 23 23 23 ASP ASP K . n J 1 24 VAL 24 24 24 VAL VAL K . n J 1 25 GLY 25 25 25 GLY GLY K . n J 1 26 SER 26 26 26 SER SER K . n J 1 27 ASN 27 27 27 ASN ASN K . n J 1 28 LYS 28 28 28 LYS LYS K . n J 1 29 GLY 29 29 29 GLY GLY K . n J 1 30 ALA 30 30 30 ALA ALA K . n J 1 31 ILE 31 31 31 ILE ILE K . n J 1 32 ILE 32 32 32 ILE ILE K . n J 1 33 GLY 33 33 33 GLY GLY K . n J 1 34 LEU 34 34 34 LEU LEU K . n J 1 35 MET 35 35 35 MET MET K . n J 1 36 VAL 36 36 36 VAL VAL K . n J 1 37 GLY 37 37 37 GLY GLY K . n J 1 38 GLY 38 38 38 GLY GLY K . n J 1 39 VAL 39 39 39 VAL VAL K . n J 1 40 VAL 40 40 40 VAL VAL K . n K 1 1 ASP 1 1 1 ASP ASP G . n K 1 2 ALA 2 2 2 ALA ALA G . n K 1 3 GLU 3 3 3 GLU GLU G . n K 1 4 PHE 4 4 4 PHE PHE G . n K 1 5 ARG 5 5 5 ARG ARG G . n K 1 6 HIS 6 6 6 HIS HIS G . n K 1 7 ASP 7 7 7 ASP ASP G . n K 1 8 SER 8 8 8 SER SER G . n K 1 9 GLY 9 9 9 GLY GLY G . n K 1 10 TYR 10 10 10 TYR TYR G . n K 1 11 GLU 11 11 11 GLU GLU G . n K 1 12 VAL 12 12 12 VAL VAL G . n K 1 13 HIS 13 13 13 HIS HIS G . n K 1 14 HIS 14 14 14 HIS HIS G . n K 1 15 GLN 15 15 15 GLN GLN G . n K 1 16 LYS 16 16 16 LYS LYS G . n K 1 17 LEU 17 17 17 LEU LEU G . n K 1 18 VAL 18 18 18 VAL VAL G . n K 1 19 PHE 19 19 19 PHE PHE G . n K 1 20 PHE 20 20 20 PHE PHE G . n K 1 21 ALA 21 21 21 ALA ALA G . n K 1 22 GLU 22 22 22 GLU GLU G . n K 1 23 ASP 23 23 23 ASP ASP G . n K 1 24 VAL 24 24 24 VAL VAL G . n K 1 25 GLY 25 25 25 GLY GLY G . n K 1 26 SER 26 26 26 SER SER G . n K 1 27 ASN 27 27 27 ASN ASN G . n K 1 28 LYS 28 28 28 LYS LYS G . n K 1 29 GLY 29 29 29 GLY GLY G . n K 1 30 ALA 30 30 30 ALA ALA G . n K 1 31 ILE 31 31 31 ILE ILE G . n K 1 32 ILE 32 32 32 ILE ILE G . n K 1 33 GLY 33 33 33 GLY GLY G . n K 1 34 LEU 34 34 34 LEU LEU G . n K 1 35 MET 35 35 35 MET MET G . n K 1 36 VAL 36 36 36 VAL VAL G . n K 1 37 GLY 37 37 37 GLY GLY G . n K 1 38 GLY 38 38 38 GLY GLY G . n K 1 39 VAL 39 39 39 VAL VAL G . n K 1 40 VAL 40 40 40 VAL VAL G . n L 1 1 ASP 1 1 1 ASP ASP L . n L 1 2 ALA 2 2 2 ALA ALA L . n L 1 3 GLU 3 3 3 GLU GLU L . n L 1 4 PHE 4 4 4 PHE PHE L . n L 1 5 ARG 5 5 5 ARG ARG L . n L 1 6 HIS 6 6 6 HIS HIS L . n L 1 7 ASP 7 7 7 ASP ASP L . n L 1 8 SER 8 8 8 SER SER L . n L 1 9 GLY 9 9 9 GLY GLY L . n L 1 10 TYR 10 10 10 TYR TYR L . n L 1 11 GLU 11 11 11 GLU GLU L . n L 1 12 VAL 12 12 12 VAL VAL L . n L 1 13 HIS 13 13 13 HIS HIS L . n L 1 14 HIS 14 14 14 HIS HIS L . n L 1 15 GLN 15 15 15 GLN GLN L . n L 1 16 LYS 16 16 16 LYS LYS L . n L 1 17 LEU 17 17 17 LEU LEU L . n L 1 18 VAL 18 18 18 VAL VAL L . n L 1 19 PHE 19 19 19 PHE PHE L . n L 1 20 PHE 20 20 20 PHE PHE L . n L 1 21 ALA 21 21 21 ALA ALA L . n L 1 22 GLU 22 22 22 GLU GLU L . n L 1 23 ASP 23 23 23 ASP ASP L . n L 1 24 VAL 24 24 24 VAL VAL L . n L 1 25 GLY 25 25 25 GLY GLY L . n L 1 26 SER 26 26 26 SER SER L . n L 1 27 ASN 27 27 27 ASN ASN L . n L 1 28 LYS 28 28 28 LYS LYS L . n L 1 29 GLY 29 29 29 GLY GLY L . n L 1 30 ALA 30 30 30 ALA ALA L . n L 1 31 ILE 31 31 31 ILE ILE L . n L 1 32 ILE 32 32 32 ILE ILE L . n L 1 33 GLY 33 33 33 GLY GLY L . n L 1 34 LEU 34 34 34 LEU LEU L . n L 1 35 MET 35 35 35 MET MET L . n L 1 36 VAL 36 36 36 VAL VAL L . n L 1 37 GLY 37 37 37 GLY GLY L . n L 1 38 GLY 38 38 38 GLY GLY L . n L 1 39 VAL 39 39 39 VAL VAL L . n L 1 40 VAL 40 40 40 VAL VAL L . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6SHS _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 6SHS _struct.title 'Abeta fibril (Morphology I)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6SHS _struct_keywords.text 'fibril, beta amyloid, Cryo-EM, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A4_HUMAN _struct_ref.pdbx_db_accession P05067 _struct_ref.pdbx_db_isoform P05067-6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVV _struct_ref.pdbx_align_begin 616 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6SHS A 1 ? 40 ? P05067 616 ? 655 ? 1 40 2 1 6SHS B 1 ? 40 ? P05067 616 ? 655 ? 1 40 3 1 6SHS C 1 ? 40 ? P05067 616 ? 655 ? 1 40 4 1 6SHS H 1 ? 40 ? P05067 616 ? 655 ? 1 40 5 1 6SHS D 1 ? 40 ? P05067 616 ? 655 ? 1 40 6 1 6SHS I 1 ? 40 ? P05067 616 ? 655 ? 1 40 7 1 6SHS E 1 ? 40 ? P05067 616 ? 655 ? 1 40 8 1 6SHS J 1 ? 40 ? P05067 616 ? 655 ? 1 40 9 1 6SHS F 1 ? 40 ? P05067 616 ? 655 ? 1 40 10 1 6SHS K 1 ? 40 ? P05067 616 ? 655 ? 1 40 11 1 6SHS G 1 ? 40 ? P05067 616 ? 655 ? 1 40 12 1 6SHS L 1 ? 40 ? P05067 616 ? 655 ? 1 40 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 36980 ? 1 MORE -147 ? 1 'SSA (A^2)' 20920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support microscopy _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 6 ? AA3 ? 6 ? AA4 ? 6 ? AA5 ? 6 ? AA6 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA2 5 6 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA3 5 6 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA4 5 6 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA5 5 6 ? parallel AA6 1 2 ? parallel AA6 2 3 ? parallel AA6 3 4 ? parallel AA6 4 5 ? parallel AA6 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA E 2 ? VAL E 12 ? ALA D 2 VAL D 12 AA1 2 ALA C 2 ? VAL C 12 ? ALA C 2 VAL C 12 AA1 3 ALA A 2 ? VAL A 12 ? ALA A 2 VAL A 12 AA1 4 ALA G 2 ? VAL G 12 ? ALA E 2 VAL E 12 AA1 5 ALA I 2 ? VAL I 12 ? ALA F 2 VAL F 12 AA1 6 ALA K 2 ? VAL K 12 ? ALA G 2 VAL G 12 AA2 1 GLN E 15 ? PHE E 19 ? GLN D 15 PHE D 19 AA2 2 GLN C 15 ? PHE C 19 ? GLN C 15 PHE C 19 AA2 3 GLN A 15 ? PHE A 19 ? GLN A 15 PHE A 19 AA2 4 GLN G 15 ? PHE G 19 ? GLN E 15 PHE E 19 AA2 5 GLN I 15 ? PHE I 19 ? GLN F 15 PHE F 19 AA2 6 GLN K 15 ? PHE K 19 ? GLN G 15 PHE G 19 AA3 1 GLY E 33 ? LEU E 34 ? GLY D 33 LEU D 34 AA3 2 GLY C 33 ? LEU C 34 ? GLY C 33 LEU C 34 AA3 3 GLY A 33 ? LEU A 34 ? GLY A 33 LEU A 34 AA3 4 GLY G 33 ? LEU G 34 ? GLY E 33 LEU E 34 AA3 5 GLY I 33 ? LEU I 34 ? GLY F 33 LEU F 34 AA3 6 GLY K 33 ? LEU K 34 ? GLY G 33 LEU G 34 AA4 1 GLU F 3 ? VAL F 12 ? GLU I 3 VAL I 12 AA4 2 GLU D 3 ? VAL D 12 ? GLU H 3 VAL H 12 AA4 3 GLU B 3 ? VAL B 12 ? GLU B 3 VAL B 12 AA4 4 GLU H 3 ? VAL H 12 ? GLU J 3 VAL J 12 AA4 5 GLU J 3 ? VAL J 12 ? GLU K 3 VAL K 12 AA4 6 GLU L 3 ? VAL L 12 ? GLU L 3 VAL L 12 AA5 1 GLN F 15 ? PHE F 19 ? GLN I 15 PHE I 19 AA5 2 GLN D 15 ? PHE D 19 ? GLN H 15 PHE H 19 AA5 3 GLN B 15 ? PHE B 19 ? GLN B 15 PHE B 19 AA5 4 GLN H 15 ? PHE H 19 ? GLN J 15 PHE J 19 AA5 5 GLN J 15 ? PHE J 19 ? GLN K 15 PHE K 19 AA5 6 GLN L 15 ? PHE L 19 ? GLN L 15 PHE L 19 AA6 1 GLY F 33 ? LEU F 34 ? GLY I 33 LEU I 34 AA6 2 GLY D 33 ? LEU D 34 ? GLY H 33 LEU H 34 AA6 3 GLY B 33 ? LEU B 34 ? GLY B 33 LEU B 34 AA6 4 GLY H 33 ? LEU H 34 ? GLY J 33 LEU J 34 AA6 5 GLY J 33 ? LEU J 34 ? GLY K 33 LEU K 34 AA6 6 GLY L 33 ? LEU L 34 ? GLY L 33 LEU L 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O HIS E 6 ? O HIS D 6 N ASP C 7 ? N ASP C 7 AA1 2 3 O HIS C 6 ? O HIS C 6 N ASP A 7 ? N ASP A 7 AA1 3 4 N HIS A 6 ? N HIS A 6 O ASP G 7 ? O ASP E 7 AA1 4 5 N HIS G 6 ? N HIS E 6 O ASP I 7 ? O ASP F 7 AA1 5 6 N HIS I 6 ? N HIS F 6 O ASP K 7 ? O ASP G 7 AA2 1 2 O LYS E 16 ? O LYS D 16 N LEU C 17 ? N LEU C 17 AA2 2 3 O LYS C 16 ? O LYS C 16 N LEU A 17 ? N LEU A 17 AA2 3 4 N LYS A 16 ? N LYS A 16 O LEU G 17 ? O LEU E 17 AA2 4 5 N LYS G 16 ? N LYS E 16 O LEU I 17 ? O LEU F 17 AA2 5 6 N LYS I 16 ? N LYS F 16 O LEU K 17 ? O LEU G 17 AA3 1 2 O LEU E 34 ? O LEU D 34 N GLY C 33 ? N GLY C 33 AA3 2 3 O LEU C 34 ? O LEU C 34 N GLY A 33 ? N GLY A 33 AA3 3 4 N LEU A 34 ? N LEU A 34 O GLY G 33 ? O GLY E 33 AA3 4 5 N LEU G 34 ? N LEU E 34 O GLY I 33 ? O GLY F 33 AA3 5 6 N LEU I 34 ? N LEU F 34 O GLY K 33 ? O GLY G 33 AA4 1 2 O PHE F 4 ? O PHE I 4 N GLU D 3 ? N GLU H 3 AA4 2 3 O PHE D 4 ? O PHE H 4 N GLU B 3 ? N GLU B 3 AA4 3 4 N PHE B 4 ? N PHE B 4 O GLU H 3 ? O GLU J 3 AA4 4 5 N PHE H 4 ? N PHE J 4 O GLU J 3 ? O GLU K 3 AA4 5 6 N PHE J 4 ? N PHE K 4 O GLU L 3 ? O GLU L 3 AA5 1 2 O LYS F 16 ? O LYS I 16 N LEU D 17 ? N LEU H 17 AA5 2 3 O LYS D 16 ? O LYS H 16 N LEU B 17 ? N LEU B 17 AA5 3 4 N LYS B 16 ? N LYS B 16 O LEU H 17 ? O LEU J 17 AA5 4 5 N LYS H 16 ? N LYS J 16 O LEU J 17 ? O LEU K 17 AA5 5 6 N LYS J 16 ? N LYS K 16 O LEU L 17 ? O LEU L 17 AA6 1 2 O LEU F 34 ? O LEU I 34 N GLY D 33 ? N GLY H 33 AA6 2 3 O LEU D 34 ? O LEU H 34 N GLY B 33 ? N GLY B 33 AA6 3 4 N LEU B 34 ? N LEU B 34 O GLY H 33 ? O GLY J 33 AA6 4 5 N LEU H 34 ? N LEU J 34 O GLY J 33 ? O GLY K 33 AA6 5 6 N LEU J 34 ? N LEU K 34 O GLY L 33 ? O GLY L 33 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 22 ? ? -121.03 -53.60 2 1 ALA A 30 ? ? -131.07 -39.44 3 1 GLU B 22 ? ? -121.04 -53.57 4 1 ALA B 30 ? ? -131.08 -39.46 5 1 GLU C 22 ? ? -121.07 -53.56 6 1 ALA C 30 ? ? -131.07 -39.41 7 1 GLU H 22 ? ? -121.02 -53.53 8 1 ALA H 30 ? ? -131.07 -39.47 9 1 GLU D 22 ? ? -121.05 -53.58 10 1 ALA D 30 ? ? -131.09 -39.39 11 1 GLU I 22 ? ? -121.07 -53.56 12 1 ALA I 30 ? ? -131.10 -39.49 13 1 GLU E 22 ? ? -121.04 -53.61 14 1 ALA E 30 ? ? -131.08 -39.44 15 1 GLU J 22 ? ? -121.04 -53.58 16 1 ALA J 30 ? ? -131.06 -39.47 17 1 GLU F 22 ? ? -121.06 -53.62 18 1 ALA F 30 ? ? -131.11 -39.47 19 1 GLU K 22 ? ? -121.06 -53.63 20 1 ALA K 30 ? ? -131.06 -39.49 21 1 GLU G 22 ? ? -121.05 -53.64 22 1 ALA G 30 ? ? -131.09 -39.44 23 1 GLU L 22 ? ? -121.04 -53.60 24 1 ALA L 30 ? ? -131.09 -39.46 # _em_3d_fitting.entry_id 6SHS _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'AB INITIO MODEL' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria ? _em_3d_fitting.method ? # _em_3d_reconstruction.entry_id 6SHS _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 12282 _em_3d_reconstruction.resolution 4.4 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details ? _em_buffer.pH 7 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name meninges _em_entity_assembly.source NATURAL _em_entity_assembly.type TISSUE _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 6SHS _em_image_scans.id 1 _em_image_scans.dimension_height ? _em_image_scans.dimension_width ? _em_image_scans.frames_per_image 40 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image 1-40 _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 6SHS _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen ? _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 3000 _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_magnification 105000 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model ? _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type C-flat-1.2/1.3 _em_sample_support.method ? _em_sample_support.film_material ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 294 _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity 90 _em_vitrification.instrument 'GATAN CRYOPLUNGE 3' _em_vitrification.entry_id 6SHS _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6SHS _em_experiment.id 1 _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 6SHS _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 SER N N N N 256 SER CA C N S 257 SER C C N N 258 SER O O N N 259 SER CB C N N 260 SER OG O N N 261 SER OXT O N N 262 SER H H N N 263 SER H2 H N N 264 SER HA H N N 265 SER HB2 H N N 266 SER HB3 H N N 267 SER HG H N N 268 SER HXT H N N 269 TYR N N N N 270 TYR CA C N S 271 TYR C C N N 272 TYR O O N N 273 TYR CB C N N 274 TYR CG C Y N 275 TYR CD1 C Y N 276 TYR CD2 C Y N 277 TYR CE1 C Y N 278 TYR CE2 C Y N 279 TYR CZ C Y N 280 TYR OH O N N 281 TYR OXT O N N 282 TYR H H N N 283 TYR H2 H N N 284 TYR HA H N N 285 TYR HB2 H N N 286 TYR HB3 H N N 287 TYR HD1 H N N 288 TYR HD2 H N N 289 TYR HE1 H N N 290 TYR HE2 H N N 291 TYR HH H N N 292 TYR HXT H N N 293 VAL N N N N 294 VAL CA C N S 295 VAL C C N N 296 VAL O O N N 297 VAL CB C N N 298 VAL CG1 C N N 299 VAL CG2 C N N 300 VAL OXT O N N 301 VAL H H N N 302 VAL H2 H N N 303 VAL HA H N N 304 VAL HB H N N 305 VAL HG11 H N N 306 VAL HG12 H N N 307 VAL HG13 H N N 308 VAL HG21 H N N 309 VAL HG22 H N N 310 VAL HG23 H N N 311 VAL HXT H N N 312 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 SER N CA sing N N 245 SER N H sing N N 246 SER N H2 sing N N 247 SER CA C sing N N 248 SER CA CB sing N N 249 SER CA HA sing N N 250 SER C O doub N N 251 SER C OXT sing N N 252 SER CB OG sing N N 253 SER CB HB2 sing N N 254 SER CB HB3 sing N N 255 SER OG HG sing N N 256 SER OXT HXT sing N N 257 TYR N CA sing N N 258 TYR N H sing N N 259 TYR N H2 sing N N 260 TYR CA C sing N N 261 TYR CA CB sing N N 262 TYR CA HA sing N N 263 TYR C O doub N N 264 TYR C OXT sing N N 265 TYR CB CG sing N N 266 TYR CB HB2 sing N N 267 TYR CB HB3 sing N N 268 TYR CG CD1 doub Y N 269 TYR CG CD2 sing Y N 270 TYR CD1 CE1 sing Y N 271 TYR CD1 HD1 sing N N 272 TYR CD2 CE2 doub Y N 273 TYR CD2 HD2 sing N N 274 TYR CE1 CZ doub Y N 275 TYR CE1 HE1 sing N N 276 TYR CE2 CZ sing Y N 277 TYR CE2 HE2 sing N N 278 TYR CZ OH sing N N 279 TYR OH HH sing N N 280 TYR OXT HXT sing N N 281 VAL N CA sing N N 282 VAL N H sing N N 283 VAL N H2 sing N N 284 VAL CA C sing N N 285 VAL CA CB sing N N 286 VAL CA HA sing N N 287 VAL C O doub N N 288 VAL C OXT sing N N 289 VAL CB CG1 sing N N 290 VAL CB CG2 sing N N 291 VAL CB HB sing N N 292 VAL CG1 HG11 sing N N 293 VAL CG1 HG12 sing N N 294 VAL CG1 HG13 sing N N 295 VAL CG2 HG21 sing N N 296 VAL CG2 HG22 sing N N 297 VAL CG2 HG23 sing N N 298 VAL OXT HXT sing N N 299 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organ brain _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue meninges # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 40.9 _em_image_recording.average_exposure_time 24 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 3027 # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? ? ? 1 ? ? 2 'IMAGE ACQUISITION' ? ? ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? Gctf ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? Coot ? ? 1 ? 8 'MODEL FITTING' ? PHENIX ? ? 1 ? 9 OTHER ? ? ? ? ? ? 10 'INITIAL EULER ASSIGNMENT' ? RELION ? 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? RELION ? 1 ? ? 12 CLASSIFICATION ? RELION ? 1 ? ? 13 RECONSTRUCTION ? RELION ? 1 ? ? 14 'MODEL REFINEMENT' ? PHENIX ? ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'German Research Foundation' Germany FA456/12-1 1 'German Research Foundation' Germany FA456/24-1 2 # _atom_sites.entry_id 6SHS _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_