HEADER HYDROLASE 31-AUG-19 6SP6 TITLE ULTRA-HIGH RESOLUTION CRYSTAL STRUCTURE OF THE CTX-M-15 EXTENDED- TITLE 2 SPECTRUM BETA-LACTAMASE IN COMPLEX WITH TANIBORBACTAM (VNRX-5133) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A; COMPND 4 EC: 3.5.2.6; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: BLACTX-M-15; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-9A KEYWDS BETA-LACTAMASE, HYDROLASE, ANTIBIOTIC RESISTANCE, BETA-LACTAM KEYWDS 2 HYDROLYSIS EXPDTA X-RAY DIFFRACTION AUTHOR J.D.DOCQUIER,C.POZZI,F.DE LUCA,M.BENVENUTI,S.MANGANI REVDAT 3 24-JAN-24 6SP6 1 REMARK REVDAT 2 08-APR-20 6SP6 1 JRNL REVDAT 1 22-JAN-20 6SP6 0 JRNL AUTH B.LIU,R.E.L.TROUT,G.H.CHU,D.MCGARRY,R.W.JACKSON,J.C.HAMRICK, JRNL AUTH 2 D.M.DAIGLE,S.M.CUSICK,C.POZZI,F.DE LUCA,M.BENVENUTI, JRNL AUTH 3 S.MANGANI,J.D.DOCQUIER,W.J.WEISS,D.C.PEVEAR,L.XERRI, JRNL AUTH 4 C.J.BURNS JRNL TITL DISCOVERY OF TANIBORBACTAM (VNRX-5133): A BROAD-SPECTRUM JRNL TITL 2 SERINE- AND METALLO-BETA-LACTAMASE INHIBITOR FOR JRNL TITL 3 CARBAPENEM-RESISTANT BACTERIAL INFECTIONS. JRNL REF J.MED.CHEM. V. 63 2789 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 31765155 JRNL DOI 10.1021/ACS.JMEDCHEM.9B01518 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.C.HAMRICK,J.D.DOCQUIER,T.UEHARA,C.L.MYERS,D.A.SIX, REMARK 1 AUTH 2 C.L.CHATWIN,K.J.JOHN,S.F.VERNACCHIO,S.M.CUSICK,R.E.L.TROUT, REMARK 1 AUTH 3 C.POZZI,F.DE LUCA,M.BENVENUTI,S.MANGANI,B.LIU,R.W.JACKSON, REMARK 1 AUTH 4 G.MOECK,L.XERRI,C.J.BURNS,D.C.PEVEAR,D.M.DAIGLE REMARK 1 TITL VNRX-5133 (TANIBORBACTAM), A BROAD-SPECTRUM INHIBITOR OF REMARK 1 TITL 2 SERINE- AND METALLO-BETA-LACTAMASES, RESTORES ACTIVITY OF REMARK 1 TITL 3 CEFEPIME IN ENTEROBACTERALES AND PSEUDOMONAS AERUGINOSA. REMARK 1 REF ANTIMICROB. AGENTS 2019 REMARK 1 REF 2 CHEMOTHER. REMARK 1 REFN ESSN 1098-6596 REMARK 1 PMID 31871094 REMARK 1 DOI 10.1128/AAC.01963-19 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 92020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.103 REMARK 3 R VALUE (WORKING SET) : 0.102 REMARK 3 FREE R VALUE : 0.121 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4746 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6620 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.1570 REMARK 3 BIN FREE R VALUE SET COUNT : 306 REMARK 3 BIN FREE R VALUE : 0.1840 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1957 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 261 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.021 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.022 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.014 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.643 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.984 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.982 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2152 ; 0.025 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2093 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2928 ; 2.160 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4825 ; 1.124 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 286 ; 5.900 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 87 ;37.272 ;24.483 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 371 ;11.969 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;11.775 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 338 ; 0.150 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2458 ; 0.013 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 464 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4244 ; 6.730 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 76 ;52.044 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4394 ;14.434 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6SP6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1292104029. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.966 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 7.1.2 REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96837 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 58.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07500 REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.30400 REMARK 200 R SYM FOR SHELL (I) : 0.30400 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP 11.2.08 REMARK 200 STARTING MODEL: 4HBT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 2.2-2.4M AMMONIUM REMARK 280 SULFATE, PH 8.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.27900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.60950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.85950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 58.60950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.27900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.85950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 27 N CA CB OG1 CG2 REMARK 470 ASP A 29 OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 69 -140.00 52.62 REMARK 500 VAL A 103 -141.99 -124.49 REMARK 500 ASN A 114 -2.04 92.43 REMARK 500 ASN A 114 17.22 80.77 REMARK 500 SER A 220 -122.25 -105.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue KJK A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 DBREF1 6SP6 A 27 288 UNP A0A223A5J4_ECOLX DBREF2 6SP6 A A0A223A5J4 11 272 SEQRES 1 A 262 THR ALA ASP VAL GLN GLN LYS LEU ALA GLU LEU GLU ARG SEQRES 2 A 262 GLN SER GLY GLY ARG LEU GLY VAL ALA LEU ILE ASN THR SEQRES 3 A 262 ALA ASP ASN SER GLN ILE LEU TYR ARG ALA ASP GLU ARG SEQRES 4 A 262 PHE ALA MET CYS SER THR SER LYS VAL MET ALA ALA ALA SEQRES 5 A 262 ALA VAL LEU LYS LYS SER GLU SER GLU PRO ASN LEU LEU SEQRES 6 A 262 ASN GLN ARG VAL GLU ILE LYS LYS SER ASP LEU VAL ASN SEQRES 7 A 262 TYR ASN PRO ILE ALA GLU LYS HIS VAL ASN GLY THR MET SEQRES 8 A 262 SER LEU ALA GLU LEU SER ALA ALA ALA LEU GLN TYR SER SEQRES 9 A 262 ASP ASN VAL ALA MET ASN LYS LEU ILE ALA HIS VAL GLY SEQRES 10 A 262 GLY PRO ALA SER VAL THR ALA PHE ALA ARG GLN LEU GLY SEQRES 11 A 262 ASP GLU THR PHE ARG LEU ASP ARG THR GLU PRO THR LEU SEQRES 12 A 262 ASN THR ALA ILE PRO GLY ASP PRO ARG ASP THR THR SER SEQRES 13 A 262 PRO ARG ALA MET ALA GLN THR LEU ARG ASN LEU THR LEU SEQRES 14 A 262 GLY LYS ALA LEU GLY ASP SER GLN ARG ALA GLN LEU VAL SEQRES 15 A 262 THR TRP MET LYS GLY ASN THR THR GLY ALA ALA SER ILE SEQRES 16 A 262 GLN ALA GLY LEU PRO ALA SER TRP VAL VAL GLY ASP LYS SEQRES 17 A 262 THR GLY SER GLY GLY TYR GLY THR THR ASN ASP ILE ALA SEQRES 18 A 262 VAL ILE TRP PRO LYS ASP ARG ALA PRO LEU ILE LEU VAL SEQRES 19 A 262 THR TYR PHE THR GLN PRO GLN PRO LYS ALA GLU SER ARG SEQRES 20 A 262 ARG ASP VAL LEU ALA SER ALA ALA LYS ILE VAL THR ASP SEQRES 21 A 262 GLY LEU HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET KJK A 306 28 HET EDO A 307 4 HET EDO A 308 4 HET PGE A 309 10 HETNAM SO4 SULFATE ION HETNAM KJK (3~{R})-3-[2-[4-(2-AZANYLETHYLAMINO) HETNAM 2 KJK CYCLOHEXYL]ETHANOYLAMINO]-2-OXIDANYL-3,4-DIHYDRO-1,2- HETNAM 3 KJK BENZOXABORININE-8-CARBOXYLIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM PGE TRIETHYLENE GLYCOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 SO4 5(O4 S 2-) FORMUL 7 KJK C19 H28 B N3 O5 FORMUL 8 EDO 2(C2 H6 O2) FORMUL 10 PGE C6 H14 O4 FORMUL 11 HOH *261(H2 O) HELIX 1 AA1 ALA A 28 GLY A 42 1 15 HELIX 2 AA2 CYS A 69 THR A 71 5 3 HELIX 3 AA3 SER A 72 GLU A 85 1 14 HELIX 4 AA4 ASN A 89 ASN A 92 5 4 HELIX 5 AA5 LYS A 98 LEU A 102 5 5 HELIX 6 AA6 ILE A 108 HIS A 112 5 5 HELIX 7 AA7 LEU A 119 SER A 130 1 12 HELIX 8 AA8 ASP A 131 GLY A 143 1 13 HELIX 9 AA9 GLY A 144 LEU A 155 1 12 HELIX 10 AB1 PRO A 167 THR A 171 5 5 HELIX 11 AB2 SER A 182 LEU A 195 1 14 HELIX 12 AB3 GLY A 200 GLY A 213 1 14 HELIX 13 AB4 SER A 220 LEU A 225 5 6 HELIX 14 AB5 ARG A 273 ASP A 286 1 14 SHEET 1 AA1 5 SER A 56 TYR A 60 0 SHEET 2 AA1 5 ARG A 44 ASN A 51 -1 N LEU A 49 O ILE A 58 SHEET 3 AA1 5 LEU A 257 THR A 264 -1 O THR A 264 N ARG A 44 SHEET 4 AA1 5 THR A 242 TRP A 250 -1 N ASP A 245 O THR A 261 SHEET 5 AA1 5 VAL A 230 GLY A 238 -1 N VAL A 230 O TRP A 250 SHEET 1 AA2 2 PHE A 66 ALA A 67 0 SHEET 2 AA2 2 THR A 180 THR A 181 -1 O THR A 181 N PHE A 66 SHEET 1 AA3 2 ARG A 94 GLU A 96 0 SHEET 2 AA3 2 THR A 116 SER A 118 -1 O MET A 117 N VAL A 95 LINK OG SER A 70 B07 KJK A 306 1555 1555 1.51 LINK S SO4 A 301 O3 SO4 A 302 1555 3554 1.48 LINK S SO4 A 301 O1 SO4 A 302 1555 3554 1.45 LINK S SO4 A 301 O2 SO4 A 302 1555 3554 1.46 LINK S SO4 A 301 O4 SO4 A 302 1555 3554 1.47 LINK O1 SO4 A 301 S SO4 A 302 1555 3554 1.48 LINK O2 SO4 A 301 S SO4 A 302 1555 3554 1.47 LINK O3 SO4 A 301 S SO4 A 302 1555 3554 1.46 LINK O4 SO4 A 301 S SO4 A 302 1555 3554 1.45 CISPEP 1 GLU A 166 PRO A 167 0 5.43 SITE 1 AC1 8 LYS A 82 ARG A 164 THR A 168 ARG A 178 SITE 2 AC1 8 HOH A 450 HOH A 524 HOH A 558 HOH A 608 SITE 1 AC2 9 LYS A 98 LYS A 99 SER A 100 ASN A 114 SITE 2 AC2 9 HOH A 418 HOH A 445 HOH A 516 HOH A 527 SITE 3 AC2 9 HOH A 555 SITE 1 AC3 4 SER A 237 SER A 272 ARG A 274 KJK A 306 SITE 1 AC4 15 CYS A 69 SER A 70 ASN A 104 TYR A 105 SITE 2 AC4 15 SER A 130 ASN A 132 ASN A 170 LYS A 234 SITE 3 AC4 15 THR A 235 GLY A 236 SER A 237 ARG A 274 SITE 4 AC4 15 SO4 A 305 HOH A 442 HOH A 512 SITE 1 AC5 4 ALA A 223 LEU A 225 PRO A 266 LYS A 282 SITE 1 AC6 5 ARG A 44 ARG A 65 GLY A 175 ASP A 176 SITE 2 AC6 5 HOH A 596 SITE 1 AC7 4 VAL A 208 THR A 209 LYS A 212 VAL A 230 SITE 1 AC8 6 ARG A 153 LYS A 197 HOH A 429 HOH A 555 SITE 2 AC8 6 HOH A 586 HOH A 604 SITE 1 AC9 6 ARG A 153 LYS A 197 HOH A 429 HOH A 555 SITE 2 AC9 6 HOH A 586 HOH A 604 SITE 1 AD1 6 ARG A 153 LYS A 197 HOH A 429 HOH A 555 SITE 2 AD1 6 HOH A 586 HOH A 604 SITE 1 AD2 6 ARG A 153 LYS A 197 HOH A 429 HOH A 555 SITE 2 AD2 6 HOH A 586 HOH A 604 SITE 1 AD3 6 ARG A 153 LYS A 197 HOH A 429 HOH A 555 SITE 2 AD3 6 HOH A 586 HOH A 604 SITE 1 AD4 6 ARG A 153 LYS A 197 HOH A 429 HOH A 555 SITE 2 AD4 6 HOH A 586 HOH A 604 SITE 1 AD5 6 ARG A 153 LYS A 197 HOH A 429 HOH A 555 SITE 2 AD5 6 HOH A 586 HOH A 604 SITE 1 AD6 6 ARG A 153 LYS A 197 HOH A 429 HOH A 555 SITE 2 AD6 6 HOH A 586 HOH A 604 CRYST1 44.558 45.719 117.219 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022442 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021873 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008531 0.00000