HEADER STRUCTURAL PROTEIN 02-SEP-19 6SPV TITLE CRYSTAL STRUCTURE OF PDZ1-2 FROM PSD-95 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISKS LARGE HOMOLOG 4; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POSTSYNAPTIC DENSITY PROTEIN 95,PSD-95,SYNAPSE-ASSOCIATED COMPND 5 PROTEIN 90,SAP90; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DLG4, PSD95; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: POPINF KEYWDS PSD-95 FRAGMENT, CLUSTERING, PROTEIN-COMPLEX, RECEPTOR-BINDING, KEYWDS 2 MEMBRANE ASSOCIATED, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.RODZLI,C.W.LEVY,S.M.PRINCE REVDAT 4 24-JAN-24 6SPV 1 JRNL REVDAT 3 19-AUG-20 6SPV 1 JRNL REVDAT 2 22-JUL-20 6SPV 1 JRNL REVDAT 1 02-OCT-19 6SPV 0 JRNL AUTH N.A.RODZLI,M.P.LOCKHART-CAIRNS,C.W.LEVY,J.CHIPPERFIELD, JRNL AUTH 2 L.BIRD,C.BALDOCK,S.M.PRINCE JRNL TITL THE DUAL PDZ DOMAIN FROM POSTSYNAPTIC DENSITY PROTEIN 95 JRNL TITL 2 FORMS A SCAFFOLD WITH PEPTIDE LIGAND. JRNL REF BIOPHYS.J. V. 119 667 2020 JRNL REFN ESSN 1542-0086 JRNL PMID 32652058 JRNL DOI 10.1016/J.BPJ.2020.06.018 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH N.RODZLI,M.P.LOCKHART-CAIRNS,C.W.LEVY,J.CHIPPERFIELD,L.BIRD, REMARK 1 AUTH 2 C.BALDOCK,S.M.PRINCE REMARK 1 TITL HOW THE DUAL PDZ DOMAIN FROM POSTSYNAPTIC DENSITY PROTEIN 95 REMARK 1 TITL 2 CLUSTERS ION CHANNELS AND RECEPTORS. REMARK 1 REF BIORXIV 2019 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/775726 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 2014/05/25 REMARK 3 AUTHORS : NULL REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 13994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 735 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 977 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.42 REMARK 3 BIN R VALUE (WORKING SET) : 0.2770 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.3190 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1416 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.25600 REMARK 3 B22 (A**2) : -0.25600 REMARK 3 B33 (A**2) : 0.51300 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.219 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.185 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.206 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.136 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.932 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1540 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2080 ; 0.996 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 204 ; 5.223 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 62 ;33.327 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 273 ;11.507 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ; 9.216 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 233 ; 0.064 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1157 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 527 ; 0.179 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 955 ; 0.294 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 47 ; 0.100 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 798 ; 1.436 ; 2.751 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 999 ; 2.565 ; 4.109 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 742 ; 1.752 ; 3.125 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1078 ; 2.889 ; 4.580 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 14.9420 33.7950 -0.0830 REMARK 3 T TENSOR REMARK 3 T11: 0.2639 T22: 0.4317 REMARK 3 T33: 0.1355 T12: 0.1135 REMARK 3 T13: 0.1513 T23: 0.1953 REMARK 3 L TENSOR REMARK 3 L11: 2.9983 L22: 4.2941 REMARK 3 L33: 7.0435 L12: -0.1990 REMARK 3 L13: 0.4135 L23: 0.1915 REMARK 3 S TENSOR REMARK 3 S11: 0.3869 S12: -0.1652 S13: 0.1446 REMARK 3 S21: -0.3013 S22: 0.3830 S23: 0.0621 REMARK 3 S31: -0.9537 S32: -0.8731 S33: -0.7699 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : NULL NULL NULL NULL REMARK 3 ORIGIN FOR THE GROUP (A): 10.2500 11.2710 24.4610 REMARK 3 T TENSOR REMARK 3 T11: 0.2071 T22: 0.7363 REMARK 3 T33: 0.2300 T12: 0.0590 REMARK 3 T13: 0.0378 T23: 0.3696 REMARK 3 L TENSOR REMARK 3 L11: 2.5193 L22: 5.7973 REMARK 3 L33: 9.0799 L12: 0.2768 REMARK 3 L13: 0.2625 L23: -5.2225 REMARK 3 S TENSOR REMARK 3 S11: -0.0076 S12: -0.1107 S13: -0.1689 REMARK 3 S21: 0.4380 S22: 1.0184 S23: 0.7508 REMARK 3 S31: -0.1631 S32: -0.8872 S33: -1.0108 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 6SPV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1292104109. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2, XDS REMARK 200 DATA SCALING SOFTWARE : SCALA, POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14015 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 48.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.54700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3RL7, 3RL8 REMARK 200 REMARK 200 REMARK: BI-PYRAMID REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CALCIUM ACETATE; 0.1 M SODIUM REMARK 280 CACODYLATE; 40% V/V PEG 400, PH 6.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.19000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 25.19000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.13500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 25.19000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.56750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 25.19000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 133.70250 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.19000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 25.19000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 89.13500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 25.19000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 133.70250 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 25.19000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 44.56750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 436 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 439 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 53 REMARK 465 PRO A 54 REMARK 465 ASN A 55 REMARK 465 GLY A 56 REMARK 465 THR A 57 REMARK 465 SER A 247 REMARK 465 ASN A 248 REMARK 465 ALA A 249 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 121 -119.36 48.41 REMARK 500 LYS A 165 -157.13 -109.20 REMARK 500 LEU A 170 -72.64 -41.09 REMARK 500 ASN A 180 46.43 -148.13 REMARK 500 ASN A 216 -116.68 50.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH A 301 DBREF 6SPV A 55 249 UNP P78352 DLG4_HUMAN 55 249 SEQADV 6SPV GLY A 53 UNP P78352 EXPRESSION TAG SEQADV 6SPV PRO A 54 UNP P78352 EXPRESSION TAG SEQRES 1 A 197 GLY PRO ASN GLY THR GLU GLY GLU MET GLU TYR GLU GLU SEQRES 2 A 197 ILE THR LEU GLU ARG GLY ASN SER GLY LEU GLY PHE SER SEQRES 3 A 197 ILE ALA GLY GLY THR ASP ASN PRO HIS ILE GLY ASP ASP SEQRES 4 A 197 PRO SER ILE PHE ILE THR LYS ILE ILE PRO GLY GLY ALA SEQRES 5 A 197 ALA ALA GLN ASP GLY ARG LEU ARG VAL ASN ASP SER ILE SEQRES 6 A 197 LEU PHE VAL ASN GLU VAL ASP VAL ARG GLU VAL THR HIS SEQRES 7 A 197 SER ALA ALA VAL GLU ALA LEU LYS GLU ALA GLY SER ILE SEQRES 8 A 197 VAL ARG LEU TYR VAL MET ARG ARG LYS PRO PRO ALA GLU SEQRES 9 A 197 LYS VAL MET GLU ILE LYS LEU ILE LYS GLY PRO LYS GLY SEQRES 10 A 197 LEU GLY PHE SER ILE ALA GLY GLY VAL GLY ASN GLN HIS SEQRES 11 A 197 ILE PRO GLY ASP ASN SER ILE TYR VAL THR LYS ILE ILE SEQRES 12 A 197 GLU GLY GLY ALA ALA HIS LYS ASP GLY ARG LEU GLN ILE SEQRES 13 A 197 GLY ASP LYS ILE LEU ALA VAL ASN SER VAL GLY LEU GLU SEQRES 14 A 197 ASP VAL MET HIS GLU ASP ALA VAL ALA ALA LEU LYS ASN SEQRES 15 A 197 THR TYR ASP VAL VAL TYR LEU LYS VAL ALA LYS PRO SER SEQRES 16 A 197 ASN ALA HET GSH A 301 20 HETNAM GSH GLUTATHIONE FORMUL 2 GSH C10 H17 N3 O6 S FORMUL 3 HOH *40(H2 O) HELIX 1 AA1 GLY A 103 GLY A 109 1 7 HELIX 2 AA2 THR A 129 GLU A 139 1 11 HELIX 3 AA3 GLY A 198 GLY A 204 1 7 HELIX 4 AA4 MET A 224 ASN A 234 1 11 SHEET 1 AA1 5 MET A 61 GLU A 69 0 SHEET 2 AA1 5 ILE A 143 ARG A 151 -1 O ARG A 150 N GLU A 62 SHEET 3 AA1 5 SER A 116 VAL A 120 -1 N LEU A 118 O TYR A 147 SHEET 4 AA1 5 ILE A 94 ILE A 99 -1 N ILE A 94 O ILE A 117 SHEET 5 AA1 5 PHE A 77 GLY A 81 -1 N ALA A 80 O PHE A 95 SHEET 1 AA2 4 MET A 61 GLU A 69 0 SHEET 2 AA2 4 ILE A 143 ARG A 151 -1 O ARG A 150 N GLU A 62 SHEET 3 AA2 4 SER A 116 VAL A 120 -1 N LEU A 118 O TYR A 147 SHEET 4 AA2 4 VAL A 123 ASP A 124 -1 O VAL A 123 N VAL A 120 SHEET 1 AA3 5 LYS A 157 ILE A 164 0 SHEET 2 AA3 5 VAL A 238 LYS A 245 -1 O LEU A 241 N ILE A 161 SHEET 3 AA3 5 LYS A 211 VAL A 215 -1 N LEU A 213 O LYS A 242 SHEET 4 AA3 5 ILE A 189 ILE A 194 -1 N ILE A 189 O ILE A 212 SHEET 5 AA3 5 PHE A 172 GLY A 176 -1 N ALA A 175 O TYR A 190 SHEET 1 AA4 4 LYS A 157 ILE A 164 0 SHEET 2 AA4 4 VAL A 238 LYS A 245 -1 O LEU A 241 N ILE A 161 SHEET 3 AA4 4 LYS A 211 VAL A 215 -1 N LEU A 213 O LYS A 242 SHEET 4 AA4 4 VAL A 218 GLY A 219 -1 O VAL A 218 N VAL A 215 SITE 1 AC1 11 GLU A 65 THR A 67 GLU A 69 ASP A 108 SITE 2 AC1 11 ASN A 121 GLU A 122 ARG A 145 LYS A 162 SITE 3 AC1 11 VAL A 238 TYR A 240 HOH A 418 CRYST1 50.380 50.380 178.270 90.00 90.00 90.00 I 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019849 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019849 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005609 0.00000