HEADER LIGASE 04-SEP-19 6SQP TITLE CRYSTAL STRUCTURE OF CAT MDM2-S429E RING DOMAIN HOMODIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE MDM2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DOUBLE MINUTE 2 PROTEIN,RING-TYPE E3 UBIQUITIN TRANSFERASE COMPND 5 MDM2,P53-BINDING PROTEIN MDM2; COMPND 6 EC: 2.3.2.27; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: RESIDUES 422-491 AND CONTAINS S429E AND G443T COMPND 10 MUTATION. GS AT THE N-TERMINUS RESULTED FROM CLONING.; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE MDM2; COMPND 13 CHAIN: B, D; COMPND 14 SYNONYM: DOUBLE MINUTE 2 PROTEIN,RING-TYPE E3 UBIQUITIN TRANSFERASE COMPND 15 MDM2,P53-BINDING PROTEIN MDM2; COMPND 16 EC: 2.3.2.27; COMPND 17 ENGINEERED: YES; COMPND 18 MUTATION: YES; COMPND 19 OTHER_DETAILS: RESIDUES 422-491 AND CONTAINS S429E AND G443T. GS AT COMPND 20 THE N-TERMINUS RESULTED FROM CLONING.; COMPND 21 MOL_ID: 3; COMPND 22 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE MDM2; COMPND 23 CHAIN: C; COMPND 24 SYNONYM: DOUBLE MINUTE 2 PROTEIN,RING-TYPE E3 UBIQUITIN TRANSFERASE COMPND 25 MDM2,P53-BINDING PROTEIN MDM2; COMPND 26 EC: 2.3.2.27; COMPND 27 ENGINEERED: YES; COMPND 28 MUTATION: YES; COMPND 29 OTHER_DETAILS: RESIDUES 422-491 AND CONTAINS S429E AND G443T. GS AT COMPND 30 THE N-TERMINUS RESULTED FROM CLONING. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FELIS CATUS; SOURCE 3 ORGANISM_COMMON: CAT; SOURCE 4 ORGANISM_TAXID: 9685; SOURCE 5 GENE: MDM2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: FELIS CATUS; SOURCE 10 ORGANISM_COMMON: CAT; SOURCE 11 ORGANISM_TAXID: 9685; SOURCE 12 GENE: MDM2; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: FELIS CATUS; SOURCE 17 ORGANISM_COMMON: CAT; SOURCE 18 ORGANISM_TAXID: 9685; SOURCE 19 GENE: MDM2; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS MDM2, MDMX, UBIQUITIN LIGASE, E3, PHOSPHORYLATION, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR H.M.MAGNUSSEN,S.F.AHMED,D.T.HUANG REVDAT 3 24-JAN-24 6SQP 1 REMARK REVDAT 2 13-MAY-20 6SQP 1 JRNL REVDAT 1 06-MAY-20 6SQP 0 JRNL AUTH H.M.MAGNUSSEN,S.F.AHMED,G.J.SIBBET,V.A.HRISTOVA,K.NOMURA, JRNL AUTH 2 A.K.HOCK,L.J.ARCHIBALD,A.G.JAMIESON,D.FUSHMAN,K.H.VOUSDEN, JRNL AUTH 3 A.M.WEISSMAN,D.T.HUANG JRNL TITL STRUCTURAL BASIS FOR DNA DAMAGE-INDUCED PHOSPHOREGULATION OF JRNL TITL 2 MDM2 RING DOMAIN. JRNL REF NAT COMMUN V. 11 2094 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32350255 JRNL DOI 10.1038/S41467-020-15783-Y REMARK 2 REMARK 2 RESOLUTION. 1.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2142: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 71796 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6SQP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1292104170. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.916 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71796 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.210 REMARK 200 RESOLUTION RANGE LOW (A) : 23.530 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5MNJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MMT, PH 9.0 AND 25% (W/V) REMARK 280 PEG1500, VAPOR DIFFUSION, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 19.88000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 429 CG CD OE1 OE2 REMARK 470 LYS A 470 CG CD CE NZ REMARK 470 GLU B 424 CG CD OE1 OE2 REMARK 470 ILE B 425 CG1 CG2 CD1 REMARK 470 LYS B 467 CG CD CE NZ REMARK 470 LYS B 470 CG CD CE NZ REMARK 470 ARG B 471 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 454 CG CD CE NZ REMARK 470 LYS C 470 CG CD CE NZ REMARK 470 GLU D 424 CG CD OE1 OE2 REMARK 470 LYS D 466 CG CD CE NZ REMARK 470 LYS D 467 CG CD CE NZ REMARK 470 LYS D 470 CG CD CE NZ REMARK 470 ARG D 471 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 479 CG CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG D 444 NE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 459 6.22 -151.14 REMARK 500 PHE A 490 76.98 -119.26 REMARK 500 THR B 443 -34.81 -131.15 REMARK 500 CYS C 438 128.10 -36.33 REMARK 500 CYS C 438 127.18 -36.33 REMARK 500 PHE C 490 76.12 -119.15 REMARK 500 MET D 459 -1.15 -145.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 662 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH D 667 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH D 668 DISTANCE = 11.87 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 438 SG REMARK 620 2 CYS A 441 SG 105.4 REMARK 620 3 CYS A 461 SG 111.7 116.7 REMARK 620 4 CYS A 464 SG 109.5 113.7 99.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 452 NE2 REMARK 620 2 HIS A 457 ND1 99.6 REMARK 620 3 CYS A 475 SG 119.0 116.7 REMARK 620 4 CYS A 478 SG 95.0 112.9 111.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 438 SG REMARK 620 2 CYS B 441 SG 105.1 REMARK 620 3 CYS B 461 SG 114.6 115.6 REMARK 620 4 CYS B 464 SG 110.9 111.1 99.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 452 NE2 REMARK 620 2 HIS B 457 ND1 105.8 REMARK 620 3 CYS B 475 SG 117.5 112.2 REMARK 620 4 CYS B 478 SG 92.7 113.8 113.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 438 SG REMARK 620 2 CYS C 441 SG 105.6 REMARK 620 3 CYS C 461 SG 111.8 115.4 REMARK 620 4 CYS C 464 SG 110.8 111.8 101.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 452 NE2 REMARK 620 2 HIS C 457 ND1 102.2 REMARK 620 3 CYS C 475 SG 117.7 115.7 REMARK 620 4 CYS C 478 SG 95.4 112.6 111.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 438 SG REMARK 620 2 CYS D 441 SG 106.7 REMARK 620 3 CYS D 461 SG 114.0 117.4 REMARK 620 4 CYS D 464 SG 109.5 108.5 100.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 452 NE2 REMARK 620 2 HIS D 457 ND1 104.2 REMARK 620 3 CYS D 475 SG 119.8 112.2 REMARK 620 4 CYS D 478 SG 92.3 113.2 113.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 D 503 DBREF 6SQP A 430 491 UNP Q7YRZ8 MDM2_FELCA 430 491 DBREF 6SQP B 424 491 UNP Q7YRZ8 MDM2_FELCA 424 491 DBREF 6SQP C 427 491 UNP Q7YRZ8 MDM2_FELCA 427 491 DBREF 6SQP D 424 491 UNP Q7YRZ8 MDM2_FELCA 424 491 SEQADV 6SQP GLU A 429 UNP Q7YRZ8 ENGINEERED MUTATION SEQADV 6SQP THR A 443 UNP Q7YRZ8 GLY 443 ENGINEERED MUTATION SEQADV 6SQP GLU B 429 UNP Q7YRZ8 SER 429 ENGINEERED MUTATION SEQADV 6SQP THR B 443 UNP Q7YRZ8 GLY 443 ENGINEERED MUTATION SEQADV 6SQP GLU C 429 UNP Q7YRZ8 SER 429 ENGINEERED MUTATION SEQADV 6SQP THR C 443 UNP Q7YRZ8 GLY 443 ENGINEERED MUTATION SEQADV 6SQP GLU D 429 UNP Q7YRZ8 SER 429 ENGINEERED MUTATION SEQADV 6SQP THR D 443 UNP Q7YRZ8 GLY 443 ENGINEERED MUTATION SEQRES 1 A 63 GLU PHE PRO HIS ASN ALA ILE GLU PRO CYS VAL ILE CYS SEQRES 2 A 63 GLN THR ARG PRO LYS ASN GLY CYS ILE VAL HIS GLY LYS SEQRES 3 A 63 THR GLY HIS LEU MET ALA CYS PHE THR CYS ALA LYS LYS SEQRES 4 A 63 LEU LYS LYS ARG ASN LYS PRO CYS PRO VAL CYS ARG GLN SEQRES 5 A 63 PRO ILE GLN MET ILE VAL LEU THR TYR PHE PRO SEQRES 1 B 68 GLU ILE VAL GLU PRO GLU PHE PRO HIS ASN ALA ILE GLU SEQRES 2 B 68 PRO CYS VAL ILE CYS GLN THR ARG PRO LYS ASN GLY CYS SEQRES 3 B 68 ILE VAL HIS GLY LYS THR GLY HIS LEU MET ALA CYS PHE SEQRES 4 B 68 THR CYS ALA LYS LYS LEU LYS LYS ARG ASN LYS PRO CYS SEQRES 5 B 68 PRO VAL CYS ARG GLN PRO ILE GLN MET ILE VAL LEU THR SEQRES 6 B 68 TYR PHE PRO SEQRES 1 C 65 GLU PRO GLU PHE PRO HIS ASN ALA ILE GLU PRO CYS VAL SEQRES 2 C 65 ILE CYS GLN THR ARG PRO LYS ASN GLY CYS ILE VAL HIS SEQRES 3 C 65 GLY LYS THR GLY HIS LEU MET ALA CYS PHE THR CYS ALA SEQRES 4 C 65 LYS LYS LEU LYS LYS ARG ASN LYS PRO CYS PRO VAL CYS SEQRES 5 C 65 ARG GLN PRO ILE GLN MET ILE VAL LEU THR TYR PHE PRO SEQRES 1 D 68 GLU ILE VAL GLU PRO GLU PHE PRO HIS ASN ALA ILE GLU SEQRES 2 D 68 PRO CYS VAL ILE CYS GLN THR ARG PRO LYS ASN GLY CYS SEQRES 3 D 68 ILE VAL HIS GLY LYS THR GLY HIS LEU MET ALA CYS PHE SEQRES 4 D 68 THR CYS ALA LYS LYS LEU LYS LYS ARG ASN LYS PRO CYS SEQRES 5 D 68 PRO VAL CYS ARG GLN PRO ILE GLN MET ILE VAL LEU THR SEQRES 6 D 68 TYR PHE PRO HET ZN A 501 1 HET ZN A 502 1 HET CL A 503 1 HET ZN B 501 1 HET ZN B 502 1 HET ZN C 501 1 HET ZN C 502 1 HET CL C 503 1 HET ZN D 501 1 HET ZN D 502 1 HET NO3 D 503 4 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION HETNAM NO3 NITRATE ION FORMUL 5 ZN 8(ZN 2+) FORMUL 7 CL 2(CL 1-) FORMUL 15 NO3 N O3 1- FORMUL 16 HOH *243(H2 O) HELIX 1 AA1 PRO A 431 GLU A 436 5 6 HELIX 2 AA2 CYS A 461 ARG A 471 1 11 HELIX 3 AA3 PRO B 431 GLU B 436 5 6 HELIX 4 AA4 CYS B 461 ARG B 471 1 11 HELIX 5 AA5 HIS C 432 GLU C 436 5 5 HELIX 6 AA6 CYS C 461 ARG C 471 1 11 HELIX 7 AA7 PRO D 431 GLU D 436 5 6 HELIX 8 AA8 CYS D 461 ARG D 471 1 11 SHEET 1 AA1 7 GLY A 448 HIS A 452 0 SHEET 2 AA1 7 THR A 455 HIS A 457 -1 O THR A 455 N HIS A 452 SHEET 3 AA1 7 MET B 484 TYR B 489 1 O TYR B 489 N GLY A 456 SHEET 4 AA1 7 GLY B 448 HIS B 452 -1 N VAL B 451 O MET B 484 SHEET 5 AA1 7 THR B 455 HIS B 457 -1 O THR B 455 N HIS B 452 SHEET 6 AA1 7 MET A 484 TYR A 489 1 N TYR A 489 O GLY B 456 SHEET 7 AA1 7 GLY A 448 HIS A 452 -1 N VAL A 451 O MET A 484 SHEET 1 AA2 7 GLY C 448 HIS C 452 0 SHEET 2 AA2 7 THR C 455 HIS C 457 -1 O THR C 455 N HIS C 452 SHEET 3 AA2 7 MET D 484 TYR D 489 1 O TYR D 489 N GLY C 456 SHEET 4 AA2 7 GLY D 448 HIS D 452 -1 N CYS D 449 O VAL D 486 SHEET 5 AA2 7 THR D 455 ALA D 460 -1 O THR D 455 N HIS D 452 SHEET 6 AA2 7 MET C 484 TYR C 489 1 N TYR C 489 O LEU D 458 SHEET 7 AA2 7 GLY C 448 HIS C 452 -1 N VAL C 451 O MET C 484 LINK SG CYS A 438 ZN ZN A 501 1555 1555 2.37 LINK SG CYS A 441 ZN ZN A 501 1555 1555 2.36 LINK NE2 HIS A 452 ZN ZN A 502 1555 1555 2.07 LINK ND1 HIS A 457 ZN ZN A 502 1555 1555 2.04 LINK SG CYS A 461 ZN ZN A 501 1555 1555 2.34 LINK SG CYS A 464 ZN ZN A 501 1555 1555 2.31 LINK SG CYS A 475 ZN ZN A 502 1555 1555 2.30 LINK SG CYS A 478 ZN ZN A 502 1555 1555 2.35 LINK SG CYS B 438 ZN ZN B 501 1555 1555 2.37 LINK SG CYS B 441 ZN ZN B 501 1555 1555 2.33 LINK NE2 HIS B 452 ZN ZN B 502 1555 1555 2.09 LINK ND1 HIS B 457 ZN ZN B 502 1555 1555 2.07 LINK SG CYS B 461 ZN ZN B 501 1555 1555 2.34 LINK SG CYS B 464 ZN ZN B 501 1555 1555 2.33 LINK SG CYS B 475 ZN ZN B 502 1555 1555 2.29 LINK SG CYS B 478 ZN ZN B 502 1555 1555 2.34 LINK SG CYS C 438 ZN ZN C 501 1555 1555 2.39 LINK SG CYS C 441 ZN ZN C 501 1555 1555 2.31 LINK NE2 HIS C 452 ZN ZN C 502 1555 1555 2.05 LINK ND1 HIS C 457 ZN ZN C 502 1555 1555 2.01 LINK SG CYS C 461 ZN ZN C 501 1555 1555 2.34 LINK SG CYS C 464 ZN ZN C 501 1555 1555 2.33 LINK SG CYS C 475 ZN ZN C 502 1555 1555 2.30 LINK SG CYS C 478 ZN ZN C 502 1555 1555 2.36 LINK SG CYS D 438 ZN ZN D 501 1555 1555 2.38 LINK SG CYS D 441 ZN ZN D 501 1555 1555 2.34 LINK NE2 HIS D 452 ZN ZN D 502 1555 1555 2.09 LINK ND1 HIS D 457 ZN ZN D 502 1555 1555 2.04 LINK SG CYS D 461 ZN ZN D 501 1555 1555 2.33 LINK SG CYS D 464 ZN ZN D 501 1555 1555 2.32 LINK SG CYS D 475 ZN ZN D 502 1555 1555 2.26 LINK SG CYS D 478 ZN ZN D 502 1555 1555 2.35 SITE 1 AC1 4 CYS A 438 CYS A 441 CYS A 461 CYS A 464 SITE 1 AC2 4 HIS A 452 HIS A 457 CYS A 475 CYS A 478 SITE 1 AC3 1 ARG A 479 SITE 1 AC4 5 CYS B 438 CYS B 441 ARG B 444 CYS B 461 SITE 2 AC4 5 CYS B 464 SITE 1 AC5 4 HIS B 452 HIS B 457 CYS B 475 CYS B 478 SITE 1 AC6 4 CYS C 438 CYS C 441 CYS C 461 CYS C 464 SITE 1 AC7 4 HIS C 452 HIS C 457 CYS C 475 CYS C 478 SITE 1 AC8 4 CYS D 438 CYS D 441 CYS D 461 CYS D 464 SITE 1 AC9 4 HIS D 452 HIS D 457 CYS D 475 CYS D 478 SITE 1 AD1 2 ASN B 472 ARG D 444 CRYST1 29.240 39.760 104.380 90.00 93.40 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.034200 0.000000 0.002032 0.00000 SCALE2 0.000000 0.025151 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009597 0.00000