HEADER LYASE 11-FEB-99 6STD TITLE SCYTALONE DEHYDRATASE PLUS INHIBITOR 3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SCYTALONE DEHYDRATASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: SDH; COMPND 5 EC: 4.2.1.94; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MAGNAPORTHE GRISEA; SOURCE 3 ORGANISM_TAXID: 148305; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LYASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.WAWRZAK,T.SANDALOVA,J.J.STEFFENS,G.S.BASARAB,T.LUNDQVIST, AUTHOR 2 Y.LINDQVIST,D.B.JORDAN REVDAT 7 20-SEP-23 6STD 1 REMARK LINK REVDAT 6 07-MAR-18 6STD 1 REMARK REVDAT 5 21-JUN-17 6STD 1 COMPND DBREF SEQADV REVDAT 4 16-NOV-11 6STD 1 VERSN HETATM REVDAT 3 24-FEB-09 6STD 1 VERSN REVDAT 2 01-APR-03 6STD 1 JRNL REVDAT 1 29-DEC-99 6STD 0 JRNL AUTH Z.WAWRZAK,T.SANDALOVA,J.J.STEFFENS,G.S.BASARAB,T.LUNDQVIST, JRNL AUTH 2 Y.LINDQVIST,D.B.JORDAN JRNL TITL HIGH-RESOLUTION STRUCTURES OF SCYTALONE JRNL TITL 2 DEHYDRATASE-INHIBITOR COMPLEXES CRYSTALLIZED AT JRNL TITL 3 PHYSIOLOGICAL PH. JRNL REF PROTEINS V. 35 425 1999 JRNL REFN ISSN 0887-3585 JRNL PMID 10382670 JRNL DOI 10.1002/(SICI)1097-0134(19990601)35:4<425::AID-PROT6>3.3.CO; JRNL DOI 2 2-T REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 8.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 527281 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.500 REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4101 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 425 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.421 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 24.57 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.282 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6STD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-99. REMARK 100 THE DEPOSITION ID IS D_1000000471. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54541 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: 1STD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.34000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 45.70500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 80.51000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.34000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 45.70500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 80.51000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.34000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 45.70500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.51000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.34000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 45.70500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 80.51000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -228.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 80.68000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 501 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 691 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 60 60.16 -151.10 REMARK 500 VAL A 75 -121.25 -123.54 REMARK 500 PHE A 156 -136.67 62.21 REMARK 500 ASP A 157 60.79 -110.28 REMARK 500 VAL B 75 -117.36 -122.80 REMARK 500 THR B 116 -8.81 -55.52 REMARK 500 PHE B 156 -135.23 60.26 REMARK 500 ASP B 157 56.30 -109.31 REMARK 500 LEU C 54 23.70 -142.26 REMARK 500 ALA C 60 69.52 -150.14 REMARK 500 VAL C 75 -117.92 -121.74 REMARK 500 PHE C 156 -135.69 63.46 REMARK 500 ASP C 157 65.41 -111.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C 711 DISTANCE = 7.09 ANGSTROMS REMARK 525 HOH C 731 DISTANCE = 5.93 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 163 OE2 REMARK 620 2 GLU A 163 OE1 49.3 REMARK 620 3 GLU A 163 OE1 84.2 76.7 REMARK 620 4 GLU A 163 OE2 122.6 84.2 49.3 REMARK 620 5 ASP A 164 OD1 108.8 73.0 123.1 80.4 REMARK 620 6 ASP A 164 OD1 80.4 123.1 73.0 108.8 161.4 REMARK 620 7 HOH A 711 O 81.6 110.7 152.0 154.6 84.5 80.9 REMARK 620 8 HOH A 711 O 154.6 152.0 110.7 81.6 80.9 84.5 75.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 163 OE2 REMARK 620 2 ASP A 164 OD1 81.1 REMARK 620 3 ASP A 164 OD2 130.7 50.2 REMARK 620 4 GLU A 167 OE1 83.0 75.9 90.9 REMARK 620 5 GLU A 167 OE2 88.4 125.6 123.5 49.8 REMARK 620 6 HOH A 675 O 77.9 139.1 132.3 134.6 88.6 REMARK 620 7 HOH A 685 O 158.7 119.8 69.8 104.8 82.1 82.8 REMARK 620 8 HOH A 720 O 81.1 72.5 77.7 146.3 157.5 69.9 100.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 51 O REMARK 620 2 ASP B 55 OD1 83.4 REMARK 620 3 GLU B 59 OE1 85.9 99.3 REMARK 620 4 HOH B 727 O 84.2 157.0 99.0 REMARK 620 5 HOH B 728 O 157.5 85.1 77.0 112.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG C 51 O REMARK 620 2 ASP C 55 OD1 85.8 REMARK 620 3 GLU C 59 OE1 80.4 97.3 REMARK 620 4 HOH C 669 O 73.4 155.9 91.3 REMARK 620 5 HOH C 694 O 158.3 79.4 85.7 123.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 502 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 171 OD1 REMARK 620 2 HOH C 632 O 105.2 REMARK 620 3 HOH C 650 O 73.3 143.1 REMARK 620 4 HOH C 652 O 116.2 90.6 60.0 REMARK 620 5 HOH C 665 O 76.3 72.4 138.5 161.6 REMARK 620 6 HOH C 753 O 152.6 78.7 120.0 90.6 79.3 REMARK 620 7 HOH C 757 O 85.0 143.5 73.4 116.7 76.4 77.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MS2 B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MS2 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MS2 C 602 DBREF 6STD A 10 172 UNP P56221 SCYD_MAGO7 10 172 DBREF 6STD B 10 172 UNP P56221 SCYD_MAGO7 10 172 DBREF 6STD C 10 172 UNP P56221 SCYD_MAGO7 10 172 SEQADV 6STD GLY A 9 UNP P56221 EXPRESSION TAG SEQADV 6STD GLY B 9 UNP P56221 EXPRESSION TAG SEQADV 6STD GLY C 9 UNP P56221 EXPRESSION TAG SEQRES 1 A 164 GLY GLU ILE THR PHE SER ASP TYR LEU GLY LEU MET THR SEQRES 2 A 164 CYS VAL TYR GLU TRP ALA ASP SER TYR ASP SER LYS ASP SEQRES 3 A 164 TRP ASP ARG LEU ARG LYS VAL ILE ALA PRO THR LEU ARG SEQRES 4 A 164 ILE ASP TYR ARG SER PHE LEU ASP LYS LEU TRP GLU ALA SEQRES 5 A 164 MET PRO ALA GLU GLU PHE VAL GLY MET VAL SER SER LYS SEQRES 6 A 164 GLN VAL LEU GLY ASP PRO THR LEU ARG THR GLN HIS PHE SEQRES 7 A 164 ILE GLY GLY THR ARG TRP GLU LYS VAL SER GLU ASP GLU SEQRES 8 A 164 VAL ILE GLY TYR HIS GLN LEU ARG VAL PRO HIS GLN ARG SEQRES 9 A 164 TYR LYS ASP THR THR MET LYS GLU VAL THR MET LYS GLY SEQRES 10 A 164 HIS ALA HIS SER ALA ASN LEU HIS TRP TYR LYS LYS ILE SEQRES 11 A 164 ASP GLY VAL TRP LYS PHE ALA GLY LEU LYS PRO ASP ILE SEQRES 12 A 164 ARG TRP GLY GLU PHE ASP PHE ASP ARG ILE PHE GLU ASP SEQRES 13 A 164 GLY ARG GLU THR PHE GLY ASP LYS SEQRES 1 B 164 GLY GLU ILE THR PHE SER ASP TYR LEU GLY LEU MET THR SEQRES 2 B 164 CYS VAL TYR GLU TRP ALA ASP SER TYR ASP SER LYS ASP SEQRES 3 B 164 TRP ASP ARG LEU ARG LYS VAL ILE ALA PRO THR LEU ARG SEQRES 4 B 164 ILE ASP TYR ARG SER PHE LEU ASP LYS LEU TRP GLU ALA SEQRES 5 B 164 MET PRO ALA GLU GLU PHE VAL GLY MET VAL SER SER LYS SEQRES 6 B 164 GLN VAL LEU GLY ASP PRO THR LEU ARG THR GLN HIS PHE SEQRES 7 B 164 ILE GLY GLY THR ARG TRP GLU LYS VAL SER GLU ASP GLU SEQRES 8 B 164 VAL ILE GLY TYR HIS GLN LEU ARG VAL PRO HIS GLN ARG SEQRES 9 B 164 TYR LYS ASP THR THR MET LYS GLU VAL THR MET LYS GLY SEQRES 10 B 164 HIS ALA HIS SER ALA ASN LEU HIS TRP TYR LYS LYS ILE SEQRES 11 B 164 ASP GLY VAL TRP LYS PHE ALA GLY LEU LYS PRO ASP ILE SEQRES 12 B 164 ARG TRP GLY GLU PHE ASP PHE ASP ARG ILE PHE GLU ASP SEQRES 13 B 164 GLY ARG GLU THR PHE GLY ASP LYS SEQRES 1 C 164 GLY GLU ILE THR PHE SER ASP TYR LEU GLY LEU MET THR SEQRES 2 C 164 CYS VAL TYR GLU TRP ALA ASP SER TYR ASP SER LYS ASP SEQRES 3 C 164 TRP ASP ARG LEU ARG LYS VAL ILE ALA PRO THR LEU ARG SEQRES 4 C 164 ILE ASP TYR ARG SER PHE LEU ASP LYS LEU TRP GLU ALA SEQRES 5 C 164 MET PRO ALA GLU GLU PHE VAL GLY MET VAL SER SER LYS SEQRES 6 C 164 GLN VAL LEU GLY ASP PRO THR LEU ARG THR GLN HIS PHE SEQRES 7 C 164 ILE GLY GLY THR ARG TRP GLU LYS VAL SER GLU ASP GLU SEQRES 8 C 164 VAL ILE GLY TYR HIS GLN LEU ARG VAL PRO HIS GLN ARG SEQRES 9 C 164 TYR LYS ASP THR THR MET LYS GLU VAL THR MET LYS GLY SEQRES 10 C 164 HIS ALA HIS SER ALA ASN LEU HIS TRP TYR LYS LYS ILE SEQRES 11 C 164 ASP GLY VAL TRP LYS PHE ALA GLY LEU LYS PRO ASP ILE SEQRES 12 C 164 ARG TRP GLY GLU PHE ASP PHE ASP ARG ILE PHE GLU ASP SEQRES 13 C 164 GLY ARG GLU THR PHE GLY ASP LYS HET CA A 501 1 HET CA A 502 1 HET MS2 A 601 22 HET CA B 501 1 HET MS2 B 600 22 HET CA C 501 1 HET CA C 502 1 HET MS2 C 602 22 HETNAM CA CALCIUM ION HETNAM MS2 2,2-DICHLORO-1-METHANESULFINYL-3-METHYL- HETNAM 2 MS2 CYCLOPROPANECARBOXYLIC ACID [1-(4-BROMO-PHENYL)- HETNAM 3 MS2 ETHYL]-AMIDE FORMUL 4 CA 5(CA 2+) FORMUL 6 MS2 3(C14 H16 BR CL2 N O2 S) FORMUL 12 HOH *425(H2 O) HELIX 1 1 PHE A 13 SER A 32 1 20 HELIX 2 2 TRP A 35 VAL A 41 1 7 HELIX 3 3 ARG A 51 LEU A 54 1 4 HELIX 4 4 ALA A 63 VAL A 70 1 8 HELIX 5 5 PHE A 158 ILE A 161 1 4 HELIX 6 6 GLU A 163 PHE A 169 1 7 HELIX 7 7 PHE B 13 SER B 32 1 20 HELIX 8 8 TRP B 35 ARG B 39 1 5 HELIX 9 9 ARG B 51 LEU B 54 1 4 HELIX 10 10 ALA B 63 VAL B 70 1 8 HELIX 11 11 PHE B 158 ILE B 161 1 4 HELIX 12 12 GLU B 163 GLY B 170 1 8 HELIX 13 13 PHE C 13 SER C 32 1 20 HELIX 14 14 TRP C 35 VAL C 41 1 7 HELIX 15 15 ARG C 51 LEU C 54 1 4 HELIX 16 16 ALA C 63 VAL C 70 1 8 HELIX 17 17 PHE C 158 ILE C 161 1 4 HELIX 18 18 GLU C 163 PHE C 169 1 7 SHEET 1 A 6 LYS A 56 TRP A 58 0 SHEET 2 A 6 ARG A 47 TYR A 50 -1 N TYR A 50 O LYS A 56 SHEET 3 A 6 GLY A 146 PHE A 156 1 N LEU A 147 O ARG A 47 SHEET 4 A 6 GLY A 125 LYS A 136 -1 N TRP A 134 O GLY A 146 SHEET 5 A 6 GLU A 99 ARG A 112 -1 N VAL A 108 O ALA A 127 SHEET 6 A 6 LEU A 81 ILE A 87 -1 N PHE A 86 O ARG A 107 SHEET 1 B 2 TYR A 135 ILE A 138 0 SHEET 2 B 2 VAL A 141 PHE A 144 -1 N LYS A 143 O LYS A 136 SHEET 1 C 2 THR A 90 SER A 96 0 SHEET 2 C 2 GLU A 99 HIS A 104 -1 N TYR A 103 O ARG A 91 SHEET 1 D 2 GLN A 111 TYR A 113 0 SHEET 2 D 2 VAL A 121 LYS A 124 -1 N MET A 123 O ARG A 112 SHEET 1 E 2 ILE B 48 TYR B 50 0 SHEET 2 E 2 LYS B 56 TRP B 58 -1 N TRP B 58 O ILE B 48 SHEET 1 F 4 LEU B 81 ILE B 87 0 SHEET 2 F 4 GLU B 99 ARG B 112 -1 N GLN B 111 O ARG B 82 SHEET 3 F 4 ALA B 127 ILE B 138 -1 N TYR B 135 O VAL B 100 SHEET 4 F 4 VAL B 141 PHE B 144 -1 N LYS B 143 O LYS B 136 SHEET 1 G 2 THR B 90 LYS B 94 0 SHEET 2 G 2 VAL B 100 HIS B 104 -1 N TYR B 103 O ARG B 91 SHEET 1 H 2 GLN B 111 TYR B 113 0 SHEET 2 H 2 VAL B 121 LYS B 124 -1 N MET B 123 O ARG B 112 SHEET 1 I 2 GLY B 125 HIS B 133 0 SHEET 2 I 2 LEU B 147 PHE B 156 -1 N GLU B 155 O HIS B 126 SHEET 1 J 2 ILE C 48 TYR C 50 0 SHEET 2 J 2 LYS C 56 TRP C 58 -1 N TRP C 58 O ILE C 48 SHEET 1 K 4 LEU C 81 ILE C 87 0 SHEET 2 K 4 GLU C 99 TYR C 113 -1 N GLN C 111 O ARG C 82 SHEET 3 K 4 VAL C 121 ILE C 138 -1 N TYR C 135 O VAL C 100 SHEET 4 K 4 VAL C 141 PHE C 144 -1 N LYS C 143 O LYS C 136 SHEET 1 L 2 THR C 90 SER C 96 0 SHEET 2 L 2 GLU C 99 HIS C 104 -1 N TYR C 103 O ARG C 91 SHEET 1 M 2 GLY C 125 HIS C 133 0 SHEET 2 M 2 LEU C 147 PHE C 156 -1 N GLU C 155 O HIS C 126 LINK OE2 GLU A 163 CA CA A 501 1555 1555 2.58 LINK OE1 GLU A 163 CA CA A 501 1555 1555 2.67 LINK OE1 GLU A 163 CA CA A 501 2655 1555 2.67 LINK OE2 GLU A 163 CA CA A 501 2655 1555 2.58 LINK OE2 GLU A 163 CA CA A 502 2655 1555 2.43 LINK OD1 ASP A 164 CA CA A 501 1555 1555 2.57 LINK OD1 ASP A 164 CA CA A 501 2655 1555 2.57 LINK OD1 ASP A 164 CA CA A 502 1555 1555 2.68 LINK OD2 ASP A 164 CA CA A 502 1555 1555 2.51 LINK OE1 GLU A 167 CA CA A 502 2655 1555 2.67 LINK OE2 GLU A 167 CA CA A 502 2655 1555 2.54 LINK CA CA A 501 O HOH A 711 1555 1555 2.61 LINK CA CA A 501 O HOH A 711 1555 2655 2.61 LINK CA CA A 502 O HOH A 675 1555 2655 2.73 LINK CA CA A 502 O HOH A 685 1555 2655 2.74 LINK CA CA A 502 O HOH A 720 1555 1555 2.61 LINK O ARG B 51 CA CA B 501 1555 1555 2.32 LINK OD1 ASP B 55 CA CA B 501 1555 1555 2.47 LINK OE1 GLU B 59 CA CA B 501 3555 1555 2.47 LINK CA CA B 501 O HOH B 727 1555 1555 2.71 LINK CA CA B 501 O HOH B 728 1555 1555 2.92 LINK O ARG C 51 CA CA C 501 1555 1555 2.44 LINK OD1 ASP C 55 CA CA C 501 1555 1555 2.35 LINK OE1 GLU C 59 CA CA C 501 2665 1555 2.37 LINK OD1 ASP C 171 CA CA C 502 1555 1555 2.47 LINK CA CA C 501 O HOH C 669 1555 1555 2.63 LINK CA CA C 501 O HOH C 694 1555 1555 2.70 LINK CA CA C 502 O HOH C 632 1555 1555 2.55 LINK CA CA C 502 O HOH C 650 1555 2665 2.68 LINK CA CA C 502 O HOH C 652 1555 2665 3.37 LINK CA CA C 502 O HOH C 665 1555 1555 2.59 LINK CA CA C 502 O HOH C 753 1555 1555 2.54 LINK CA CA C 502 O HOH C 757 1555 1555 2.65 SITE 1 AC1 3 GLU A 163 ASP A 164 HOH A 711 SITE 1 AC2 6 GLU A 163 ASP A 164 GLU A 167 HOH A 675 SITE 2 AC2 6 HOH A 685 HOH A 720 SITE 1 AC3 5 ARG B 51 ASP B 55 GLU B 59 HOH B 727 SITE 2 AC3 5 HOH B 728 SITE 1 AC4 5 ARG C 51 ASP C 55 GLU C 59 HOH C 669 SITE 2 AC4 5 HOH C 694 SITE 1 AC5 6 ASP C 171 HOH C 632 HOH C 650 HOH C 665 SITE 2 AC5 6 HOH C 753 HOH C 757 SITE 1 AC6 11 TRP B 26 TYR B 50 PHE B 53 VAL B 75 SITE 2 AC6 11 LEU B 76 ASN B 131 ILE B 151 PHE B 158 SITE 3 AC6 11 GLY B 165 HOH B 603 HOH B 620 SITE 1 AC7 12 TRP A 26 TYR A 50 PHE A 53 VAL A 75 SITE 2 AC7 12 LEU A 76 VAL A 108 ASN A 131 ILE A 151 SITE 3 AC7 12 PHE A 158 GLY A 165 HOH A 602 HOH A 621 SITE 1 AC8 11 TYR C 50 PHE C 53 VAL C 75 LEU C 76 SITE 2 AC8 11 ASN C 131 ILE C 151 PHE C 158 PHE C 162 SITE 3 AC8 11 GLY C 165 HOH C 607 HOH C 615 CRYST1 80.680 91.410 161.020 90.00 90.00 90.00 I 2 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012395 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010940 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006210 0.00000