HEADER HYDROLASE 27-SEP-19 6SYA TITLE STRUCTURE OF S192A-ESTER-HYDROLASE EH3 FROM THE METAGENOME OF MARINE TITLE 2 SEDIMENTS AT MILAZZO HARBOR (SICILY, ITALY) COMPLEXED WITH METHYL TITLE 3 (2R)-2-PHENYLPROPANOATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI MC1061; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 1211845; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PBXNH3 KEYWDS ESTER HYDROLASE, COMPLEX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR I.CEA-RAMA,J.SANZ-APARICIO REVDAT 4 24-JAN-24 6SYA 1 REMARK REVDAT 3 02-JUN-21 6SYA 1 JRNL REVDAT 2 28-APR-21 6SYA 1 JRNL REVDAT 1 07-APR-21 6SYA 0 JRNL AUTH I.CEA-RAMA,C.COSCOLIN,P.KATSONIS,R.BARGIELA,P.N.GOLYSHIN, JRNL AUTH 2 O.LICHTARGE,M.FERRER,J.SANZ-APARICIO JRNL TITL STRUCTURE AND EVOLUTIONARY TRACE-ASSISTED SCREENING OF A JRNL TITL 2 RESIDUE SWAPPING THE SUBSTRATE AMBIGUITY AND CHIRAL JRNL TITL 3 SPECIFICITY IN AN ESTERASE. JRNL REF COMPUT STRUCT BIOTECHNOL J V. 19 2307 2021 JRNL REFN ESSN 2001-0370 JRNL PMID 33995922 JRNL DOI 10.1016/J.CSBJ.2021.04.041 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 28826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1531 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2123 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 122 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5146 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 247 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.91000 REMARK 3 B22 (A**2) : -2.10000 REMARK 3 B33 (A**2) : -0.81000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.09000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.433 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.243 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.180 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.242 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.931 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5326 ; 0.004 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4889 ; 0.003 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7201 ; 1.413 ; 1.645 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11385 ; 1.261 ; 1.581 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 681 ; 6.556 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 266 ;34.774 ;23.459 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 880 ;13.692 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;18.893 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 694 ; 0.068 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6033 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1041 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 9 346 B 9 346 11158 0.060 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6SYA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1292104541. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97924 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL-CUT, CRYOCOOLED REMARK 200 OPTICS : KB FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 1.11.12 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30378 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 45.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.17200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.40 REMARK 200 R MERGE FOR SHELL (I) : 0.65600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6SXP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG3000, 0.2M MGCL2X6H2O, 0.1M BIS REMARK 280 -TRIS PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 92.04900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 25.58550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 92.04900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 25.58550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 LEU A -7 REMARK 465 GLU A -6 REMARK 465 VAL A -5 REMARK 465 LEU A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 GLY A -1 REMARK 465 PRO A 0 REMARK 465 SER A 1 REMARK 465 PRO A 2 REMARK 465 ASP A 3 REMARK 465 THR A 4 REMARK 465 THR A 5 REMARK 465 SER A 6 REMARK 465 LEU A 7 REMARK 465 ASN A 8 REMARK 465 GLY A 348 REMARK 465 ALA A 349 REMARK 465 MET B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 LEU B -7 REMARK 465 GLU B -6 REMARK 465 VAL B -5 REMARK 465 LEU B -4 REMARK 465 PHE B -3 REMARK 465 GLN B -2 REMARK 465 GLY B -1 REMARK 465 PRO B 0 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 ASP B 3 REMARK 465 THR B 4 REMARK 465 THR B 5 REMARK 465 SER B 6 REMARK 465 LEU B 7 REMARK 465 ASN B 8 REMARK 465 ALA B 349 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 28 73.09 66.31 REMARK 500 MET A 117 168.94 75.86 REMARK 500 ASP A 142 76.07 -106.29 REMARK 500 LEU A 147 -55.78 -125.63 REMARK 500 SER A 150 -154.55 -87.97 REMARK 500 PRO A 159 31.35 -98.14 REMARK 500 ALA A 192 -120.14 62.62 REMARK 500 CYS A 221 57.58 34.39 REMARK 500 ILE A 224 -9.00 -141.18 REMARK 500 MET A 243 -55.21 72.62 REMARK 500 HIS A 321 122.77 -39.52 REMARK 500 GLN B 31 -2.19 88.43 REMARK 500 MET B 117 167.96 75.99 REMARK 500 ASP B 142 75.47 -106.05 REMARK 500 LEU B 147 -56.00 -125.45 REMARK 500 SER B 150 -154.50 -87.49 REMARK 500 PRO B 159 32.22 -98.40 REMARK 500 ALA B 192 -119.53 61.53 REMARK 500 CYS B 221 57.91 33.11 REMARK 500 ILE B 224 -9.41 -142.28 REMARK 500 MET B 243 -55.69 72.82 REMARK 500 HIS B 321 122.66 -39.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LY8 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue LY8 B 404 DBREF1 6SYA A 2 348 UNP A0A2K8JN75_9BACT DBREF2 6SYA A A0A2K8JN75 2 348 DBREF1 6SYA B 2 348 UNP A0A2K8JN75_9BACT DBREF2 6SYA B A0A2K8JN75 2 348 SEQADV 6SYA MET A -18 UNP A0A2K8JN7 INITIATING METHIONINE SEQADV 6SYA HIS A -17 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS A -16 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS A -15 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS A -14 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS A -13 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS A -12 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS A -11 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS A -10 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS A -9 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS A -8 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA LEU A -7 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA GLU A -6 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA VAL A -5 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA LEU A -4 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA PHE A -3 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA GLN A -2 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA GLY A -1 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA PRO A 0 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA SER A 1 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA ALA A 192 UNP A0A2K8JN7 SER 192 CONFLICT SEQADV 6SYA ALA A 349 UNP A0A2K8JN7 INSERTION SEQADV 6SYA MET B -18 UNP A0A2K8JN7 INITIATING METHIONINE SEQADV 6SYA HIS B -17 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS B -16 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS B -15 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS B -14 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS B -13 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS B -12 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS B -11 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS B -10 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS B -9 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA HIS B -8 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA LEU B -7 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA GLU B -6 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA VAL B -5 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA LEU B -4 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA PHE B -3 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA GLN B -2 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA GLY B -1 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA PRO B 0 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA SER B 1 UNP A0A2K8JN7 EXPRESSION TAG SEQADV 6SYA ALA B 192 UNP A0A2K8JN7 SER 192 CONFLICT SEQADV 6SYA ALA B 349 UNP A0A2K8JN7 INSERTION SEQRES 1 A 368 MET HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS LEU GLU SEQRES 2 A 368 VAL LEU PHE GLN GLY PRO SER PRO ASP THR THR SER LEU SEQRES 3 A 368 ASN ILE ALA ASP ASP VAL ARG MET ASP PRO ARG LEU LYS SEQRES 4 A 368 ALA MET LEU ALA ALA PHE PRO MET MET GLU GLN GLN THR SEQRES 5 A 368 PHE GLN THR ARG GLU GLU GLN VAL ALA ASN ALA ASN THR SEQRES 6 A 368 PRO GLU ALA THR ALA ALA ARG GLU GLN LEU LYS MET MET SEQRES 7 A 368 MET ASP MET MET ASP SER GLU GLU PHE ALA PRO SER ASP SEQRES 8 A 368 ASN LEU ASP ILE SER THR ARG GLU PHE THR SER SER PRO SEQRES 9 A 368 ASP GLY ASN ALA ILE LYS ILE GLN PHE ILE ARG PRO LYS SEQRES 10 A 368 GLY LYS GLN LYS VAL PRO CYS VAL TYR TYR ILE HIS GLY SEQRES 11 A 368 GLY GLY MET MET ILE MET SER ALA PHE TYR GLY ASN TYR SEQRES 12 A 368 ARG ALA TRP GLY LYS MET ILE ALA ASN ASN GLY VAL ALA SEQRES 13 A 368 VAL ALA MET VAL ASP PHE ARG ASN CYS LEU SER PRO SER SEQRES 14 A 368 SER ALA PRO GLU VAL ALA PRO PHE PRO ALA GLY LEU ASN SEQRES 15 A 368 ASP CYS VAL SER GLY LEU LYS TRP VAL SER GLU ASN ALA SEQRES 16 A 368 ASP GLU LEU SER ILE ASP LYS ASN LYS ILE ILE ILE ALA SEQRES 17 A 368 GLY GLU ALA GLY GLY GLY ASN LEU THR LEU ALA THR GLY SEQRES 18 A 368 LEU LYS LEU LYS GLN ASP GLY ASN ILE ASP LEU VAL LYS SEQRES 19 A 368 GLY LEU TYR ALA LEU CYS PRO TYR ILE ALA GLY LYS TRP SEQRES 20 A 368 PRO GLN ASP ARG PHE PRO SER SER SER GLU ASN ASN GLY SEQRES 21 A 368 ILE MET ILE GLU LEU HIS ASN ASN GLN GLY ALA LEU ALA SEQRES 22 A 368 TYR GLY ILE GLU GLN LEU GLU ALA GLU ASN PRO LEU ALA SEQRES 23 A 368 TRP PRO SER PHE ALA SER ALA GLU ASP MET GLN GLY LEU SEQRES 24 A 368 PRO PRO THR VAL ILE ASN VAL ASN GLU CYS ASP PRO LEU SEQRES 25 A 368 ARG ASP GLU GLY ILE ASP PHE TYR ARG ARG LEU MET ALA SEQRES 26 A 368 ALA GLY VAL PRO ALA ARG CYS ARG GLN VAL MET GLY THR SEQRES 27 A 368 CYS HIS ALA GLY ASP MET PHE VAL ALA VAL ILE PRO ASP SEQRES 28 A 368 VAL SER ALA ASP THR ALA ALA ASP ILE ALA ARG THR ALA SEQRES 29 A 368 LYS GLY GLY ALA SEQRES 1 B 368 MET HIS HIS HIS HIS HIS HIS HIS HIS HIS HIS LEU GLU SEQRES 2 B 368 VAL LEU PHE GLN GLY PRO SER PRO ASP THR THR SER LEU SEQRES 3 B 368 ASN ILE ALA ASP ASP VAL ARG MET ASP PRO ARG LEU LYS SEQRES 4 B 368 ALA MET LEU ALA ALA PHE PRO MET MET GLU GLN GLN THR SEQRES 5 B 368 PHE GLN THR ARG GLU GLU GLN VAL ALA ASN ALA ASN THR SEQRES 6 B 368 PRO GLU ALA THR ALA ALA ARG GLU GLN LEU LYS MET MET SEQRES 7 B 368 MET ASP MET MET ASP SER GLU GLU PHE ALA PRO SER ASP SEQRES 8 B 368 ASN LEU ASP ILE SER THR ARG GLU PHE THR SER SER PRO SEQRES 9 B 368 ASP GLY ASN ALA ILE LYS ILE GLN PHE ILE ARG PRO LYS SEQRES 10 B 368 GLY LYS GLN LYS VAL PRO CYS VAL TYR TYR ILE HIS GLY SEQRES 11 B 368 GLY GLY MET MET ILE MET SER ALA PHE TYR GLY ASN TYR SEQRES 12 B 368 ARG ALA TRP GLY LYS MET ILE ALA ASN ASN GLY VAL ALA SEQRES 13 B 368 VAL ALA MET VAL ASP PHE ARG ASN CYS LEU SER PRO SER SEQRES 14 B 368 SER ALA PRO GLU VAL ALA PRO PHE PRO ALA GLY LEU ASN SEQRES 15 B 368 ASP CYS VAL SER GLY LEU LYS TRP VAL SER GLU ASN ALA SEQRES 16 B 368 ASP GLU LEU SER ILE ASP LYS ASN LYS ILE ILE ILE ALA SEQRES 17 B 368 GLY GLU ALA GLY GLY GLY ASN LEU THR LEU ALA THR GLY SEQRES 18 B 368 LEU LYS LEU LYS GLN ASP GLY ASN ILE ASP LEU VAL LYS SEQRES 19 B 368 GLY LEU TYR ALA LEU CYS PRO TYR ILE ALA GLY LYS TRP SEQRES 20 B 368 PRO GLN ASP ARG PHE PRO SER SER SER GLU ASN ASN GLY SEQRES 21 B 368 ILE MET ILE GLU LEU HIS ASN ASN GLN GLY ALA LEU ALA SEQRES 22 B 368 TYR GLY ILE GLU GLN LEU GLU ALA GLU ASN PRO LEU ALA SEQRES 23 B 368 TRP PRO SER PHE ALA SER ALA GLU ASP MET GLN GLY LEU SEQRES 24 B 368 PRO PRO THR VAL ILE ASN VAL ASN GLU CYS ASP PRO LEU SEQRES 25 B 368 ARG ASP GLU GLY ILE ASP PHE TYR ARG ARG LEU MET ALA SEQRES 26 B 368 ALA GLY VAL PRO ALA ARG CYS ARG GLN VAL MET GLY THR SEQRES 27 B 368 CYS HIS ALA GLY ASP MET PHE VAL ALA VAL ILE PRO ASP SEQRES 28 B 368 VAL SER ALA ASP THR ALA ALA ASP ILE ALA ARG THR ALA SEQRES 29 B 368 LYS GLY GLY ALA HET GOL A 401 6 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET LY8 A 406 12 HET GOL B 401 6 HET GOL B 402 6 HET GOL B 403 6 HET LY8 B 404 12 HETNAM GOL GLYCEROL HETNAM LY8 METHYL (2~{R})-2-PHENYLPROPANOATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 8(C3 H8 O3) FORMUL 8 LY8 2(C10 H12 O2) FORMUL 13 HOH *247(H2 O) HELIX 1 AA1 ASP A 16 ALA A 25 1 10 HELIX 2 AA2 THR A 36 ASN A 45 1 10 HELIX 3 AA3 THR A 46 MET A 62 1 17 HELIX 4 AA4 TYR A 121 ASN A 133 1 13 HELIX 5 AA5 PRO A 159 ASN A 175 1 17 HELIX 6 AA6 ASN A 175 SER A 180 1 6 HELIX 7 AA7 ALA A 192 ASP A 208 1 17 HELIX 8 AA8 ASN A 210 VAL A 214 5 5 HELIX 9 AA9 PRO A 234 ASN A 239 1 6 HELIX 10 AB1 ASN A 249 ALA A 262 1 14 HELIX 11 AB2 TRP A 268 ALA A 272 5 5 HELIX 12 AB3 SER A 273 GLN A 278 1 6 HELIX 13 AB4 LEU A 293 ALA A 307 1 15 HELIX 14 AB5 ALA A 322 PHE A 326 5 5 HELIX 15 AB6 ILE A 330 GLY A 347 1 18 HELIX 16 AB7 ASP B 16 PHE B 26 1 11 HELIX 17 AB8 THR B 36 ALA B 44 1 9 HELIX 18 AB9 THR B 46 MET B 62 1 17 HELIX 19 AC1 TYR B 121 ASN B 133 1 13 HELIX 20 AC2 PRO B 159 ASN B 175 1 17 HELIX 21 AC3 ASN B 175 SER B 180 1 6 HELIX 22 AC4 ALA B 192 ASP B 208 1 17 HELIX 23 AC5 ASN B 210 VAL B 214 5 5 HELIX 24 AC6 PRO B 234 ASN B 239 1 6 HELIX 25 AC7 ASN B 249 ALA B 262 1 14 HELIX 26 AC8 TRP B 268 ALA B 272 5 5 HELIX 27 AC9 SER B 273 GLN B 278 1 6 HELIX 28 AD1 LEU B 293 ALA B 307 1 15 HELIX 29 AD2 ALA B 322 PHE B 326 5 5 HELIX 30 AD3 ILE B 330 GLY B 347 1 18 SHEET 1 AA116 LEU A 74 THR A 82 0 SHEET 2 AA116 ALA A 89 PRO A 97 -1 O PHE A 94 N SER A 77 SHEET 3 AA116 ALA A 137 ASP A 142 -1 O VAL A 138 N ILE A 95 SHEET 4 AA116 VAL A 103 ILE A 109 1 N VAL A 106 O ALA A 137 SHEET 5 AA116 ILE A 181 GLU A 191 1 O ILE A 187 N TYR A 107 SHEET 6 AA116 GLY A 216 LEU A 220 1 O LEU A 220 N GLY A 190 SHEET 7 AA116 THR A 283 ASN A 288 1 O VAL A 284 N ALA A 219 SHEET 8 AA116 ALA A 311 VAL A 316 1 O VAL A 316 N VAL A 287 SHEET 9 AA116 ALA B 311 VAL B 316 -1 O GLN B 315 N GLN A 315 SHEET 10 AA116 THR B 283 ASN B 288 1 N VAL B 287 O VAL B 316 SHEET 11 AA116 GLY B 216 LEU B 220 1 N ALA B 219 O VAL B 284 SHEET 12 AA116 ILE B 181 GLU B 191 1 N GLY B 190 O LEU B 220 SHEET 13 AA116 VAL B 103 ILE B 109 1 N TYR B 107 O ILE B 187 SHEET 14 AA116 ALA B 137 ASP B 142 1 O ALA B 137 N VAL B 106 SHEET 15 AA116 ALA B 89 PRO B 97 -1 N ILE B 95 O VAL B 138 SHEET 16 AA116 LEU B 74 THR B 82 -1 N SER B 77 O PHE B 94 CISPEP 1 SER A 84 PRO A 85 0 6.24 CISPEP 2 SER A 84 PRO A 85 0 6.56 CISPEP 3 PHE A 158 PRO A 159 0 -0.44 CISPEP 4 TRP A 228 PRO A 229 0 -2.13 CISPEP 5 SER B 84 PRO B 85 0 3.74 CISPEP 6 SER B 84 PRO B 85 0 5.12 CISPEP 7 PHE B 158 PRO B 159 0 -1.02 CISPEP 8 TRP B 228 PRO B 229 0 -2.00 SITE 1 AC1 8 TYR A 223 TRP A 228 GLU A 245 LEU A 246 SITE 2 AC1 8 ASN A 248 GLN A 250 GLY A 251 LY8 A 406 SITE 1 AC2 2 MET A 63 MET B 63 SITE 1 AC3 4 ILE A 211 ASP A 212 HOH A 566 HOH A 575 SITE 1 AC4 1 GLN A 259 SITE 1 AC5 8 GLN A 55 MET A 305 GLY A 308 VAL A 309 SITE 2 AC5 8 ALA A 311 ASP B 16 ARG B 18 HOH B 501 SITE 1 AC6 8 GLY A 112 GLY A 113 ALA A 192 GLY A 193 SITE 2 AC6 8 TYR A 223 HIS A 321 GOL A 401 HOH A 513 SITE 1 AC7 10 GLY B 111 GLY B 112 MET B 117 ASN B 123 SITE 2 AC7 10 TYR B 124 GLU B 191 ALA B 192 MET B 243 SITE 3 AC7 10 PHE B 326 LY8 B 404 SITE 1 AC8 7 TYR B 223 TRP B 228 GLU B 245 ASN B 248 SITE 2 AC8 7 GLN B 250 GLY B 251 LY8 B 404 SITE 1 AC9 6 ARG A 294 GLN A 315 ARG B 294 ILE B 298 SITE 2 AC9 6 GLN B 315 HOH B 587 SITE 1 AD1 9 MET B 29 GLY B 112 GLY B 113 ALA B 192 SITE 2 AD1 9 GLY B 193 TYR B 223 HIS B 321 GOL B 401 SITE 3 AD1 9 GOL B 402 CRYST1 184.098 51.171 70.437 90.00 93.96 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005432 0.000000 0.000376 0.00000 SCALE2 0.000000 0.019542 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014231 0.00000