HEADER VIRAL PROTEIN 30-SEP-19 6SYI TITLE C-TERMINAL DOMAIN OF INFLUENZA POLYMERASE PA SUBUNIT AND OPTIMIZED TITLE 2 SMALL PEPTIDE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RNA-DIRECTED RNA POLYMERASE SUBUNIT P2; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PB1-11; COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/WISCONSIN/629- SOURCE 3 D00036/2009(H1N1)); SOURCE 4 ORGANISM_TAXID: 723675; SOURCE 5 GENE: PA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS NEURAMINIDASE, INFLUENZA, COMPLEX, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.HEJDANEK,P.PACHL REVDAT 2 24-JAN-24 6SYI 1 REMARK REVDAT 1 25-NOV-20 6SYI 0 JRNL AUTH J.HEJDANEK,K.RADILOVA,P.PACHL,J.HODEK,A.MACHARA,J.WEBER, JRNL AUTH 2 P.REZACOVA,J.KONVALINKA,M.KOZISEK JRNL TITL STRUCTURAL CHARACTERIZATION OF THE INTERACTION BETWEEN THE JRNL TITL 2 C-TERMINAL DOMAIN OF THE INFLUENZA POLYMERASE PA SUBUNIT AND JRNL TITL 3 AN OPTIMIZED SMALL PEPTIDE INHIBITOR. JRNL REF ANTIVIRAL RES. V. 185 04971 2020 JRNL REFN ISSN 0166-3542 JRNL PMID 33166574 JRNL DOI 10.1016/J.ANTIVIRAL.2020.104971 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 72724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2101 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5137 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.4370 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.4590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3402 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 314 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.93000 REMARK 3 B22 (A**2) : -1.22000 REMARK 3 B33 (A**2) : -0.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.081 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.415 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3521 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3267 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4762 ; 1.423 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7585 ; 1.431 ; 1.578 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 434 ; 6.043 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 173 ;34.657 ;22.370 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 613 ;13.330 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;14.684 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 459 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3877 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 730 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 256 A 293 REMARK 3 ORIGIN FOR THE GROUP (A): -9.3670 2.9120 32.9010 REMARK 3 T TENSOR REMARK 3 T11: 0.1277 T22: 0.0993 REMARK 3 T33: 0.0216 T12: 0.0206 REMARK 3 T13: -0.0214 T23: -0.0296 REMARK 3 L TENSOR REMARK 3 L11: 0.0014 L22: 0.8766 REMARK 3 L33: 1.2287 L12: 0.0184 REMARK 3 L13: 0.0094 L23: 0.8489 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: 0.0074 S13: -0.0019 REMARK 3 S21: 0.0095 S22: 0.0524 S23: -0.0300 REMARK 3 S31: -0.1233 S32: 0.0114 S33: -0.0545 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 294 A 397 REMARK 3 ORIGIN FOR THE GROUP (A): -13.4600 -21.1380 8.8950 REMARK 3 T TENSOR REMARK 3 T11: 0.1264 T22: 0.0521 REMARK 3 T33: 0.0204 T12: 0.0168 REMARK 3 T13: -0.0246 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.4261 L22: 0.9308 REMARK 3 L33: 0.3458 L12: 0.0687 REMARK 3 L13: 0.0126 L23: 0.0386 REMARK 3 S TENSOR REMARK 3 S11: 0.0086 S12: 0.0160 S13: -0.0813 REMARK 3 S21: -0.1220 S22: 0.0224 S23: 0.0083 REMARK 3 S31: 0.0786 S32: 0.0023 S33: -0.0309 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 398 A 443 REMARK 3 ORIGIN FOR THE GROUP (A): -13.9730 2.9370 20.8990 REMARK 3 T TENSOR REMARK 3 T11: 0.1127 T22: 0.0618 REMARK 3 T33: 0.0269 T12: 0.0100 REMARK 3 T13: -0.0427 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 1.0687 L22: 0.9861 REMARK 3 L33: 1.9370 L12: -0.2163 REMARK 3 L13: 1.2256 L23: 0.4508 REMARK 3 S TENSOR REMARK 3 S11: -0.0253 S12: -0.0058 S13: -0.0063 REMARK 3 S21: -0.2065 S22: 0.0330 S23: 0.0184 REMARK 3 S31: -0.1735 S32: 0.0449 S33: -0.0077 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 444 A 549 REMARK 3 ORIGIN FOR THE GROUP (A): -17.6100 -10.1310 15.3080 REMARK 3 T TENSOR REMARK 3 T11: 0.1054 T22: 0.0843 REMARK 3 T33: 0.0236 T12: 0.0321 REMARK 3 T13: -0.0415 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.1207 L22: 0.5007 REMARK 3 L33: 0.5319 L12: 0.0142 REMARK 3 L13: 0.1105 L23: 0.4589 REMARK 3 S TENSOR REMARK 3 S11: -0.0269 S12: -0.0520 S13: 0.0189 REMARK 3 S21: -0.0872 S22: -0.0332 S23: 0.0652 REMARK 3 S31: -0.0596 S32: -0.0379 S33: 0.0600 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 550 A 581 REMARK 3 ORIGIN FOR THE GROUP (A): -12.5860 -8.4840 15.3300 REMARK 3 T TENSOR REMARK 3 T11: 0.0889 T22: 0.0735 REMARK 3 T33: 0.0244 T12: 0.0151 REMARK 3 T13: -0.0292 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 1.0804 L22: 0.4469 REMARK 3 L33: 0.6074 L12: 0.0134 REMARK 3 L13: -0.4448 L23: 0.1381 REMARK 3 S TENSOR REMARK 3 S11: -0.0101 S12: -0.0562 S13: 0.0525 REMARK 3 S21: -0.0671 S22: -0.0280 S23: 0.0371 REMARK 3 S31: 0.0187 S32: 0.0463 S33: 0.0381 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 582 A 615 REMARK 3 ORIGIN FOR THE GROUP (A): -29.7850 16.3440 24.4610 REMARK 3 T TENSOR REMARK 3 T11: 0.1208 T22: 0.2054 REMARK 3 T33: 0.2351 T12: 0.1425 REMARK 3 T13: -0.1366 T23: -0.1869 REMARK 3 L TENSOR REMARK 3 L11: 0.6825 L22: 4.7171 REMARK 3 L33: 1.2558 L12: -0.6320 REMARK 3 L13: 0.7262 L23: 0.7020 REMARK 3 S TENSOR REMARK 3 S11: -0.1466 S12: -0.2818 S13: 0.1510 REMARK 3 S21: -0.2961 S22: -0.2721 S23: 0.5917 REMARK 3 S31: -0.2779 S32: -0.4721 S33: 0.4187 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 616 A 716 REMARK 3 ORIGIN FOR THE GROUP (A): -15.0360 9.5580 36.1210 REMARK 3 T TENSOR REMARK 3 T11: 0.1320 T22: 0.0524 REMARK 3 T33: 0.0294 T12: 0.0062 REMARK 3 T13: -0.0196 T23: -0.0299 REMARK 3 L TENSOR REMARK 3 L11: 0.1095 L22: 1.2104 REMARK 3 L33: 1.3238 L12: -0.0482 REMARK 3 L13: 0.1908 L23: 1.0001 REMARK 3 S TENSOR REMARK 3 S11: -0.0623 S12: 0.0162 S13: -0.0065 REMARK 3 S21: 0.0434 S22: -0.0265 S23: 0.1180 REMARK 3 S31: -0.0765 S32: 0.0136 S33: 0.0888 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 6 REMARK 3 ORIGIN FOR THE GROUP (A): -12.5150 11.3980 27.9600 REMARK 3 T TENSOR REMARK 3 T11: 0.2008 T22: 0.0882 REMARK 3 T33: 0.0487 T12: 0.0604 REMARK 3 T13: -0.0430 T23: -0.0465 REMARK 3 L TENSOR REMARK 3 L11: 1.0292 L22: 5.1470 REMARK 3 L33: 2.9689 L12: -2.2529 REMARK 3 L13: -1.7025 L23: 3.8852 REMARK 3 S TENSOR REMARK 3 S11: 0.0422 S12: -0.0472 S13: 0.0214 REMARK 3 S21: -0.3101 S22: -0.0025 S23: 0.0056 REMARK 3 S31: -0.2434 S32: 0.0398 S33: -0.0396 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 7 B 11 REMARK 3 ORIGIN FOR THE GROUP (A): -16.9280 18.2410 32.3440 REMARK 3 T TENSOR REMARK 3 T11: 0.0972 T22: 0.0467 REMARK 3 T33: 0.0693 T12: 0.0067 REMARK 3 T13: -0.0340 T23: -0.0384 REMARK 3 L TENSOR REMARK 3 L11: 0.0011 L22: 7.8590 REMARK 3 L33: 3.8617 L12: -0.0314 REMARK 3 L13: 0.0261 L23: -1.9914 REMARK 3 S TENSOR REMARK 3 S11: 0.0060 S12: -0.0036 S13: 0.0001 REMARK 3 S21: -0.0909 S22: 0.0188 S23: 0.2713 REMARK 3 S31: -0.2273 S32: -0.1660 S33: -0.0248 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6SYI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1292104449. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 74825 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 43.043 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.564 REMARK 200 R MERGE (I) : 0.07300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.28 REMARK 200 R MERGE FOR SHELL (I) : 2.65800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2ZNL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES; PH 7.5, 35% PEG 3350, PH REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.76050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.31300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.44150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.31300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.76050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.44150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 373 REMARK 465 MET A 374 REMARK 465 ALA A 375 REMARK 465 PRO A 376 REMARK 465 GLU A 377 REMARK 465 LYS A 378 REMARK 465 VAL A 379 REMARK 465 ASP A 380 REMARK 465 PHE A 381 REMARK 465 ASP A 382 REMARK 465 ASP A 383 REMARK 465 CYS A 384 REMARK 465 LYS A 385 REMARK 465 ASP A 386 REMARK 465 VAL A 387 REMARK 465 GLY A 388 REMARK 465 ASP A 389 REMARK 465 LEU A 390 REMARK 465 LYS A 391 REMARK 465 GLN A 392 REMARK 465 TYR A 393 REMARK 465 ASP A 394 REMARK 465 SER A 395 REMARK 465 ASP A 396 REMARK 465 ASP A 426 REMARK 465 GLU A 427 REMARK 465 ILE A 428 REMARK 465 GLY A 429 REMARK 465 GLU A 430 REMARK 465 ASP A 431 REMARK 465 VAL A 432 REMARK 465 ALA A 433 REMARK 465 PRO A 434 REMARK 465 ILE A 435 REMARK 465 GLU A 436 REMARK 465 HIS A 437 REMARK 465 ILE A 438 REMARK 465 ALA A 439 REMARK 465 SER A 440 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 300 CG CD OE1 OE2 REMARK 470 LYS A 328 CE NZ REMARK 470 GLU A 352 CG CD OE1 OE2 REMARK 470 LYS A 353 CD CE NZ REMARK 470 ARG A 356 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 372 CG CD OE1 OE2 REMARK 470 GLU A 399 CG CD OE1 OE2 REMARK 470 MET A 441 CG SD CE REMARK 470 ARG A 442 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 443 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 492 CG CD CE NZ REMARK 470 GLU A 493 CD OE1 OE2 REMARK 470 ARG A 512 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 603 CG CD CE NZ REMARK 470 GLU A 604 CG CD OE1 OE2 REMARK 470 LYS A 605 CG CD CE NZ REMARK 470 LYS A 609 CG CD CE NZ REMARK 470 GLU A 610 CG CD OE1 OE2 REMARK 470 ASN A 614 CG OD1 ND2 REMARK 470 LYS A 615 CG CD CE NZ REMARK 470 ARG A 626 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 629 CG CD OE1 OE2 REMARK 470 LYS A 716 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 279 18.13 -142.94 REMARK 500 ARG A 279 18.23 -142.99 REMARK 500 LEU A 284 -95.78 -113.40 REMARK 500 ARG A 442 46.81 -94.03 REMARK 500 ILE A 695 -63.55 -109.68 REMARK 500 ASN A 696 -0.33 -154.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1211 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH A1212 DISTANCE = 6.22 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 805 DBREF 6SYI A 257 716 UNP D4HIS2 D4HIS2_9INFA 257 716 DBREF 6SYI B 2 11 PDB 6SYI 6SYI 2 11 SEQADV 6SYI SER A 256 UNP D4HIS2 EXPRESSION TAG SEQRES 1 A 461 SER ILE GLU PRO PHE LEU ARG THR THR PRO ARG PRO LEU SEQRES 2 A 461 ARG LEU PRO ASP GLY PRO LEU CYS HIS GLN ARG SER LYS SEQRES 3 A 461 PHE LEU LEU MET ASP ALA LEU LYS LEU SER ILE GLU ASP SEQRES 4 A 461 PRO SER HIS GLU GLY GLU GLY ILE PRO LEU TYR ASP ALA SEQRES 5 A 461 ILE LYS CYS MET LYS THR PHE PHE GLY TRP LYS GLU PRO SEQRES 6 A 461 ASN ILE VAL LYS PRO HIS GLU LYS GLY ILE ASN PRO ASN SEQRES 7 A 461 TYR LEU MET ALA TRP LYS GLN VAL LEU ALA GLU LEU GLN SEQRES 8 A 461 ASP ILE GLU ASN GLU GLU LYS ILE PRO ARG THR LYS ASN SEQRES 9 A 461 MET LYS ARG THR SER GLN LEU LYS TRP ALA LEU GLY GLU SEQRES 10 A 461 ASN MET ALA PRO GLU LYS VAL ASP PHE ASP ASP CYS LYS SEQRES 11 A 461 ASP VAL GLY ASP LEU LYS GLN TYR ASP SER ASP GLU PRO SEQRES 12 A 461 GLU PRO ARG SER LEU ALA SER TRP VAL GLN ASN GLU PHE SEQRES 13 A 461 ASN LYS ALA CYS GLU LEU THR ASP SER SER TRP ILE GLU SEQRES 14 A 461 LEU ASP GLU ILE GLY GLU ASP VAL ALA PRO ILE GLU HIS SEQRES 15 A 461 ILE ALA SER MET ARG ARG ASN TYR PHE THR ALA GLU VAL SEQRES 16 A 461 SER HIS CYS ARG ALA THR GLU TYR ILE MET LYS GLY VAL SEQRES 17 A 461 TYR ILE ASN THR ALA LEU LEU ASN ALA SER CYS ALA ALA SEQRES 18 A 461 MET ASP ASP PHE GLN LEU ILE PRO MET ILE SER LYS CYS SEQRES 19 A 461 ARG THR LYS GLU GLY ARG ARG LYS THR ASN LEU TYR GLY SEQRES 20 A 461 PHE ILE ILE LYS GLY ARG SER HIS LEU ARG ASN ASP THR SEQRES 21 A 461 ASP VAL VAL ASN PHE VAL SER MET GLU PHE SER LEU THR SEQRES 22 A 461 ASP PRO ARG LEU GLU PRO HIS LYS TRP GLU LYS TYR CYS SEQRES 23 A 461 VAL LEU GLU ILE GLY ASP MET LEU LEU ARG THR ALA ILE SEQRES 24 A 461 GLY GLN VAL SER ARG PRO MET PHE LEU TYR VAL ARG THR SEQRES 25 A 461 ASN GLY THR SER LYS ILE LYS MET LYS TRP GLY MET GLU SEQRES 26 A 461 MET ARG ARG CYS LEU LEU GLN SER LEU GLN GLN ILE GLU SEQRES 27 A 461 SER MET ILE GLU ALA GLU SER SER VAL LYS GLU LYS ASP SEQRES 28 A 461 MET THR LYS GLU PHE PHE GLU ASN LYS SER GLU THR TRP SEQRES 29 A 461 PRO ILE GLY GLU SER PRO ARG GLY VAL GLU GLU GLY SER SEQRES 30 A 461 ILE GLY LYS VAL CYS ARG THR LEU LEU ALA LYS SER VAL SEQRES 31 A 461 PHE ASN SER LEU TYR ALA SER PRO GLN LEU GLU GLY PHE SEQRES 32 A 461 SER ALA GLU SER ARG LYS LEU LEU LEU ILE VAL GLN ALA SEQRES 33 A 461 LEU ARG ASP ASN LEU GLU PRO GLY THR PHE ASP LEU GLY SEQRES 34 A 461 GLY LEU TYR GLU ALA ILE GLU GLU CYS LEU ILE ASN ASP SEQRES 35 A 461 PRO TRP VAL LEU LEU ASN ALA SER TRP PHE ASN SER PHE SEQRES 36 A 461 LEU THR HIS ALA LEU LYS SEQRES 1 B 10 ASP TYR ASN PRO TYR LEU LEU PHE LEU LYS HET PGE A 801 10 HET EDO A 802 4 HET EDO A 803 4 HET EDO A 804 4 HET EDO A 805 4 HETNAM PGE TRIETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 PGE C6 H14 O4 FORMUL 4 EDO 4(C2 H6 O2) FORMUL 8 HOH *314(H2 O) HELIX 1 AA1 GLU A 258 ARG A 262 5 5 HELIX 2 AA2 ILE A 302 LYS A 312 1 11 HELIX 3 AA3 ILE A 330 GLU A 351 1 22 HELIX 4 AA4 THR A 363 LEU A 370 1 8 HELIX 5 AA5 SER A 405 CYS A 415 1 11 HELIX 6 AA6 ARG A 443 SER A 451 1 9 HELIX 7 AA7 CYS A 453 ALA A 476 1 24 HELIX 8 AA8 GLU A 533 GLU A 538 5 6 HELIX 9 AA9 LYS A 572 GLU A 580 1 9 HELIX 10 AB1 ARG A 582 GLU A 604 1 23 HELIX 11 AB2 MET A 607 ASN A 614 1 8 HELIX 12 AB3 SER A 632 TYR A 650 1 19 HELIX 13 AB4 SER A 652 ASP A 674 1 23 HELIX 14 AB5 ASP A 682 GLU A 692 1 11 HELIX 15 AB6 ASP A 697 LEU A 715 1 19 HELIX 16 AB7 ASN B 4 LYS B 11 5 8 SHEET 1 AA1 6 LEU A 290 GLU A 293 0 SHEET 2 AA1 6 ARG A 496 LYS A 506 -1 O LEU A 500 N LEU A 290 SHEET 3 AA1 6 VAL A 517 SER A 526 -1 O VAL A 521 N ILE A 505 SHEET 4 AA1 6 GLN A 556 SER A 571 -1 O PHE A 562 N SER A 526 SHEET 5 AA1 6 CYS A 541 ARG A 551 -1 N MET A 548 O ARG A 559 SHEET 6 AA1 6 TRP A 317 LYS A 324 -1 N VAL A 323 O VAL A 542 SHEET 1 AA2 4 LEU A 290 GLU A 293 0 SHEET 2 AA2 4 ARG A 496 LYS A 506 -1 O LEU A 500 N LEU A 290 SHEET 3 AA2 4 PHE A 480 ARG A 490 -1 N SER A 487 O ASN A 499 SHEET 4 AA2 4 ASN A 359 MET A 360 -1 N MET A 360 O PHE A 480 SHEET 1 AA3 2 TRP A 619 GLU A 623 0 SHEET 2 AA3 2 VAL A 628 GLY A 631 -1 O GLU A 629 N GLY A 622 SITE 1 AC1 3 LYS A 643 PRO B 5 PHE B 9 SITE 1 AC2 5 TYR A 305 LYS A 309 LYS A 312 GLU A 349 SITE 2 AC2 5 HOH A 911 SITE 1 AC3 5 LYS A 281 ASN A 466 THR A 570 HOH A 903 SITE 2 AC3 5 HOH A1026 SITE 1 AC4 6 LEU A 284 ALA A 287 LYS A 289 ARG A 454 SITE 2 AC4 6 GLU A 457 HOH A 947 SITE 1 AC5 5 GLU A 623 SER A 705 TRP A 706 SER A 709 SITE 2 AC5 5 ASN B 4 CRYST1 37.521 120.883 122.626 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026652 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008272 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008155 0.00000