HEADER TRANSCRIPTION 06-OCT-19 6T1V TITLE STRUCTURE OF PPARG H494Y MUTANT IN COMPLEX WITH GW1929 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PPAR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 GROUP C MEMBER 3; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA COMPND 9 COACTIVATOR 1-ALPHA; COMPND 10 CHAIN: C; COMPND 11 SYNONYM: PPARGC-1-ALPHA,LIGAND EFFECT MODULATOR 6; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPARG, NR1C3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS NUCLEAR RECEPTOR, COMPLEX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR N.ROCHEL REVDAT 3 07-FEB-24 6T1V 1 REMARK REVDAT 2 18-JAN-23 6T1V 1 TITLE COMPND SOURCE REMARK REVDAT 2 2 1 HELIX SITE ATOM REVDAT 1 14-APR-21 6T1V 0 JRNL AUTH N.ROCHEL JRNL TITL STRUCTURE OF A PPARG MUTANT COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.74 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25888 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.730 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.7400 - 5.3400 0.99 1816 153 0.1560 0.1822 REMARK 3 2 5.3300 - 4.2300 1.00 1762 147 0.1265 0.1433 REMARK 3 3 4.2300 - 3.7000 1.00 1717 144 0.1273 0.1667 REMARK 3 4 3.7000 - 3.3600 1.00 1715 144 0.1540 0.1808 REMARK 3 5 3.3600 - 3.1200 1.00 1700 141 0.1737 0.1770 REMARK 3 6 3.1200 - 2.9400 0.99 1694 143 0.1912 0.2533 REMARK 3 7 2.9400 - 2.7900 1.00 1675 139 0.1947 0.2004 REMARK 3 8 2.7900 - 2.6700 1.00 1685 142 0.2107 0.2700 REMARK 3 9 2.6700 - 2.5700 1.00 1684 141 0.2020 0.2115 REMARK 3 10 2.5700 - 2.4800 1.00 1700 142 0.2020 0.2344 REMARK 3 11 2.4800 - 2.4000 1.00 1692 142 0.2093 0.2642 REMARK 3 12 2.4000 - 2.3300 1.00 1669 139 0.2074 0.2386 REMARK 3 13 2.3300 - 2.2700 1.00 1695 142 0.2279 0.2956 REMARK 3 14 2.2700 - 2.2100 1.00 1684 141 0.2561 0.2865 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.386 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2338 REMARK 3 ANGLE : 0.513 3154 REMARK 3 CHIRALITY : 0.038 364 REMARK 3 PLANARITY : 0.004 425 REMARK 3 DIHEDRAL : 11.231 920 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.4595 41.4956 65.3763 REMARK 3 T TENSOR REMARK 3 T11: 0.6439 T22: 0.4659 REMARK 3 T33: 0.3028 T12: -0.1291 REMARK 3 T13: 0.1035 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 3.5481 L22: 4.7502 REMARK 3 L33: 3.3570 L12: -1.5497 REMARK 3 L13: -0.9021 L23: 3.9419 REMARK 3 S TENSOR REMARK 3 S11: 0.3246 S12: -1.0033 S13: -0.5635 REMARK 3 S21: 1.2444 S22: -0.1443 S23: 0.0246 REMARK 3 S31: 0.9010 S32: -0.1035 S33: 0.1097 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 254 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.8080 34.0557 53.7328 REMARK 3 T TENSOR REMARK 3 T11: 0.5658 T22: 0.3293 REMARK 3 T33: 0.3529 T12: -0.0044 REMARK 3 T13: 0.0057 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 2.0296 L22: 7.1918 REMARK 3 L33: 8.0123 L12: -3.6262 REMARK 3 L13: -0.8835 L23: 1.6648 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: 0.1076 S13: -0.7844 REMARK 3 S21: 0.5074 S22: -0.1071 S23: 0.0743 REMARK 3 S31: 1.2999 S32: 0.4294 S33: 0.2116 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 268 THROUGH 279 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.7700 26.9485 44.3215 REMARK 3 T TENSOR REMARK 3 T11: 0.5512 T22: 0.4276 REMARK 3 T33: 0.6727 T12: 0.1463 REMARK 3 T13: 0.0856 T23: 0.0572 REMARK 3 L TENSOR REMARK 3 L11: 5.0821 L22: 5.5665 REMARK 3 L33: 6.5175 L12: 0.7836 REMARK 3 L13: 1.1564 L23: 1.3353 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: -0.5557 S13: -0.9743 REMARK 3 S21: 1.1279 S22: 0.0650 S23: 0.4049 REMARK 3 S31: 0.8746 S32: -0.1699 S33: 0.0434 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 280 THROUGH 289 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.1849 26.5270 32.2018 REMARK 3 T TENSOR REMARK 3 T11: 0.4500 T22: 0.5352 REMARK 3 T33: 0.7647 T12: 0.0842 REMARK 3 T13: 0.0050 T23: -0.1935 REMARK 3 L TENSOR REMARK 3 L11: 2.8736 L22: 2.3362 REMARK 3 L33: 8.7005 L12: 0.1121 REMARK 3 L13: -4.8586 L23: 0.8002 REMARK 3 S TENSOR REMARK 3 S11: 0.2823 S12: 0.8712 S13: -0.8056 REMARK 3 S21: -0.2942 S22: -0.1663 S23: 1.7804 REMARK 3 S31: 0.5429 S32: -0.4679 S33: 0.0602 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 290 THROUGH 304 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7292 29.5306 30.4166 REMARK 3 T TENSOR REMARK 3 T11: 0.4156 T22: 0.4219 REMARK 3 T33: 0.5270 T12: -0.1034 REMARK 3 T13: 0.0599 T23: -0.1663 REMARK 3 L TENSOR REMARK 3 L11: 6.8814 L22: 7.3289 REMARK 3 L33: 7.8665 L12: 0.7208 REMARK 3 L13: -0.3158 L23: -3.1512 REMARK 3 S TENSOR REMARK 3 S11: 0.1544 S12: 0.8052 S13: -0.6217 REMARK 3 S21: -1.3011 S22: 0.9306 S23: -0.2783 REMARK 3 S31: -0.1184 S32: 0.2203 S33: -0.7728 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 305 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5574 38.2954 42.1410 REMARK 3 T TENSOR REMARK 3 T11: 0.2727 T22: 0.2983 REMARK 3 T33: 0.3292 T12: -0.0085 REMARK 3 T13: 0.0048 T23: -0.0636 REMARK 3 L TENSOR REMARK 3 L11: 3.1754 L22: 3.2611 REMARK 3 L33: 4.2057 L12: 0.4934 REMARK 3 L13: -2.0517 L23: 0.8744 REMARK 3 S TENSOR REMARK 3 S11: -0.1295 S12: 0.0015 S13: -0.3477 REMARK 3 S21: 0.0003 S22: -0.1246 S23: 0.0789 REMARK 3 S31: 0.3936 S32: 0.0633 S33: 0.2894 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 331 THROUGH 361 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4596 48.4985 51.0518 REMARK 3 T TENSOR REMARK 3 T11: 0.3628 T22: 0.4351 REMARK 3 T33: 0.3371 T12: -0.0338 REMARK 3 T13: 0.0322 T23: -0.1205 REMARK 3 L TENSOR REMARK 3 L11: 1.7357 L22: 3.1470 REMARK 3 L33: 1.4215 L12: 0.2169 REMARK 3 L13: 1.2324 L23: -0.4494 REMARK 3 S TENSOR REMARK 3 S11: 0.1750 S12: 0.0337 S13: 0.1903 REMARK 3 S21: 0.0655 S22: -0.3491 S23: 0.4357 REMARK 3 S31: -0.0595 S32: -0.4290 S33: 0.1867 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 362 THROUGH 405 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.3442 41.7911 40.3079 REMARK 3 T TENSOR REMARK 3 T11: 0.2436 T22: 0.2725 REMARK 3 T33: 0.3268 T12: -0.0104 REMARK 3 T13: 0.0427 T23: -0.0100 REMARK 3 L TENSOR REMARK 3 L11: 3.0750 L22: 3.1154 REMARK 3 L33: 5.8355 L12: -0.2858 REMARK 3 L13: 0.4248 L23: 2.4506 REMARK 3 S TENSOR REMARK 3 S11: 0.0112 S12: 0.1710 S13: -0.1997 REMARK 3 S21: -0.2646 S22: 0.0484 S23: -0.2495 REMARK 3 S31: -0.1924 S32: 0.2976 S33: -0.0358 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 406 THROUGH 458 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0297 52.7355 60.8893 REMARK 3 T TENSOR REMARK 3 T11: 0.4338 T22: 0.3315 REMARK 3 T33: 0.2898 T12: -0.0982 REMARK 3 T13: 0.0445 T23: -0.0800 REMARK 3 L TENSOR REMARK 3 L11: 2.0695 L22: 4.2387 REMARK 3 L33: 4.3141 L12: -0.7882 REMARK 3 L13: 1.4257 L23: -0.5583 REMARK 3 S TENSOR REMARK 3 S11: -0.0913 S12: -0.3310 S13: 0.3094 REMARK 3 S21: 0.7317 S22: -0.1918 S23: 0.0251 REMARK 3 S31: -0.2468 S32: -0.1395 S33: 0.3074 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 459 THROUGH 487 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1845 53.9309 42.5263 REMARK 3 T TENSOR REMARK 3 T11: 0.3758 T22: 0.3061 REMARK 3 T33: 0.3045 T12: 0.0162 REMARK 3 T13: 0.0102 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 3.8214 L22: 3.1219 REMARK 3 L33: 2.7506 L12: 0.9707 REMARK 3 L13: 3.1279 L23: 1.3433 REMARK 3 S TENSOR REMARK 3 S11: -0.3477 S12: 0.3511 S13: 0.3378 REMARK 3 S21: -0.2607 S22: -0.0932 S23: 0.1672 REMARK 3 S31: -0.8079 S32: 0.5138 S33: 0.5218 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 488 THROUGH 501 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0244 43.5640 32.8862 REMARK 3 T TENSOR REMARK 3 T11: 0.4751 T22: 0.5607 REMARK 3 T33: 0.3867 T12: 0.0600 REMARK 3 T13: -0.1257 T23: -0.1651 REMARK 3 L TENSOR REMARK 3 L11: 2.7401 L22: 3.2758 REMARK 3 L33: 2.1150 L12: 1.8858 REMARK 3 L13: -0.8197 L23: -2.5021 REMARK 3 S TENSOR REMARK 3 S11: -0.0661 S12: 0.7758 S13: -0.3407 REMARK 3 S21: -0.7848 S22: 0.0744 S23: 0.5234 REMARK 3 S31: 0.4899 S32: -0.1851 S33: 0.1015 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 502 THROUGH 505 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9532 55.5717 38.8201 REMARK 3 T TENSOR REMARK 3 T11: 0.5348 T22: 0.5880 REMARK 3 T33: 1.0193 T12: 0.1626 REMARK 3 T13: -0.1036 T23: -0.0682 REMARK 3 L TENSOR REMARK 3 L11: 7.6028 L22: 2.3436 REMARK 3 L33: 9.7231 L12: 3.6495 REMARK 3 L13: 4.4727 L23: 4.1684 REMARK 3 S TENSOR REMARK 3 S11: -0.2550 S12: 0.4491 S13: 1.7392 REMARK 3 S21: -1.0099 S22: -0.4210 S23: 0.6100 REMARK 3 S31: -1.3160 S32: -0.6147 S33: 0.5880 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 141 THROUGH 150 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6358 42.7830 46.7691 REMARK 3 T TENSOR REMARK 3 T11: 0.3486 T22: 0.5559 REMARK 3 T33: 0.6352 T12: -0.0569 REMARK 3 T13: 0.0364 T23: -0.2410 REMARK 3 L TENSOR REMARK 3 L11: 8.4333 L22: 2.0694 REMARK 3 L33: 9.7844 L12: 0.4307 REMARK 3 L13: -2.0104 L23: 0.3538 REMARK 3 S TENSOR REMARK 3 S11: 0.2744 S12: -0.2516 S13: 0.7660 REMARK 3 S21: 0.0700 S22: -0.3832 S23: 1.3996 REMARK 3 S31: -0.1685 S32: -0.5595 S33: 0.0329 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6T1V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292104709. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.968 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25902 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 52.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XLD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1 M HEPES PH REMARK 280 7.5, TRISODIUM CITRATE 1.2M, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.17450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.37050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 74.92150 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 28.17450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.37050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 74.92150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.17450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.37050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 74.92150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 28.17450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.37050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 74.92150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 227 REMARK 465 SER A 228 REMARK 465 HIS A 229 REMARK 465 MET A 230 REMARK 465 GLN A 231 REMARK 465 LEU A 232 REMARK 465 ASN A 233 REMARK 465 PRO A 234 REMARK 465 GLU A 235 REMARK 465 SER A 236 REMARK 465 ALA A 237 REMARK 465 GLU C 139 REMARK 465 GLU C 140 REMARK 465 PRO C 151 REMARK 465 ALA C 152 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 472 O HOH A 4101 2.14 REMARK 500 O HOH A 4153 O HOH A 4279 2.18 REMARK 500 OG1 THR A 269 OD1 ASP A 271 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 292 109.86 -164.50 REMARK 500 THR A 489 -86.12 -92.55 REMARK 500 LEU C 149 73.90 -103.91 REMARK 500 REMARK 500 REMARK: NULL DBREF 6T1V A 231 505 UNP P37231 PPARG_HUMAN 231 505 DBREF 6T1V C 139 152 UNP Q9UBK2 PRGC1_HUMAN 139 152 SEQADV 6T1V GLY A 227 UNP P37231 EXPRESSION TAG SEQADV 6T1V SER A 228 UNP P37231 EXPRESSION TAG SEQADV 6T1V HIS A 229 UNP P37231 EXPRESSION TAG SEQADV 6T1V MET A 230 UNP P37231 EXPRESSION TAG SEQADV 6T1V TYR A 494 UNP P37231 HIS 494 ENGINEERED MUTATION SEQRES 1 A 279 GLY SER HIS MET GLN LEU ASN PRO GLU SER ALA ASP LEU SEQRES 2 A 279 ARG ALA LEU ALA LYS HIS LEU TYR ASP SER TYR ILE LYS SEQRES 3 A 279 SER PHE PRO LEU THR LYS ALA LYS ALA ARG ALA ILE LEU SEQRES 4 A 279 THR GLY LYS THR THR ASP LYS SER PRO PHE VAL ILE TYR SEQRES 5 A 279 ASP MET ASN SER LEU MET MET GLY GLU ASP LYS ILE LYS SEQRES 6 A 279 PHE LYS HIS ILE THR PRO LEU GLN GLU GLN SER LYS GLU SEQRES 7 A 279 VAL ALA ILE ARG ILE PHE GLN GLY CYS GLN PHE ARG SER SEQRES 8 A 279 VAL GLU ALA VAL GLN GLU ILE THR GLU TYR ALA LYS SER SEQRES 9 A 279 ILE PRO GLY PHE VAL ASN LEU ASP LEU ASN ASP GLN VAL SEQRES 10 A 279 THR LEU LEU LYS TYR GLY VAL HIS GLU ILE ILE TYR THR SEQRES 11 A 279 MET LEU ALA SER LEU MET ASN LYS ASP GLY VAL LEU ILE SEQRES 12 A 279 SER GLU GLY GLN GLY PHE MET THR ARG GLU PHE LEU LYS SEQRES 13 A 279 SER LEU ARG LYS PRO PHE GLY ASP PHE MET GLU PRO LYS SEQRES 14 A 279 PHE GLU PHE ALA VAL LYS PHE ASN ALA LEU GLU LEU ASP SEQRES 15 A 279 ASP SER ASP LEU ALA ILE PHE ILE ALA VAL ILE ILE LEU SEQRES 16 A 279 SER GLY ASP ARG PRO GLY LEU LEU ASN VAL LYS PRO ILE SEQRES 17 A 279 GLU ASP ILE GLN ASP ASN LEU LEU GLN ALA LEU GLU LEU SEQRES 18 A 279 GLN LEU LYS LEU ASN HIS PRO GLU SER SER GLN LEU PHE SEQRES 19 A 279 ALA LYS LEU LEU GLN LYS MET THR ASP LEU ARG GLN ILE SEQRES 20 A 279 VAL THR GLU HIS VAL GLN LEU LEU GLN VAL ILE LYS LYS SEQRES 21 A 279 THR GLU THR ASP MET SER LEU TYR PRO LEU LEU GLN GLU SEQRES 22 A 279 ILE TYR LYS ASP LEU TYR SEQRES 1 C 14 GLU GLU PRO SER LEU LEU LYS LYS LEU LEU LEU ALA PRO SEQRES 2 C 14 ALA HET EDK A4000 37 HETNAM EDK (2~{S})-3-[4-[2-[METHYL(PYRIDIN-2-YL) HETNAM 2 EDK AMINO]ETHOXY]PHENYL]-2-[[2-(PHENYLCARBONYL) HETNAM 3 EDK PHENYL]AMINO]PROPANOIC ACID FORMUL 3 EDK C30 H29 N3 O4 FORMUL 4 HOH *230(H2 O) HELIX 1 AA1 ASP A 238 PHE A 254 1 17 HELIX 2 AA2 THR A 257 THR A 266 1 10 HELIX 3 AA3 ASP A 279 GLU A 287 1 9 HELIX 4 AA4 ASP A 288 ILE A 290 5 3 HELIX 5 AA5 PRO A 297 GLN A 301 5 5 HELIX 6 AA6 GLU A 304 LYS A 329 1 26 HELIX 7 AA7 ASP A 338 LEU A 361 1 24 HELIX 8 AA8 ARG A 378 SER A 383 1 6 HELIX 9 AA9 PRO A 387 PHE A 391 5 5 HELIX 10 AB1 MET A 392 ALA A 404 1 13 HELIX 11 AB2 ASP A 408 LEU A 421 1 14 HELIX 12 AB3 ASN A 430 HIS A 453 1 24 HELIX 13 AB4 GLN A 458 GLU A 488 1 31 HELIX 14 AB5 TYR A 494 LYS A 502 1 9 HELIX 15 AB6 SER C 142 LEU C 149 1 8 SHEET 1 AA1 4 PHE A 275 ILE A 277 0 SHEET 2 AA1 4 GLY A 374 THR A 377 1 O PHE A 375 N ILE A 277 SHEET 3 AA1 4 GLY A 366 ILE A 369 -1 N VAL A 367 O MET A 376 SHEET 4 AA1 4 MET A 362 ASN A 363 -1 N ASN A 363 O GLY A 366 CISPEP 1 LYS A 386 PRO A 387 0 -1.93 CRYST1 56.349 120.741 149.843 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017747 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008282 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006674 0.00000