HEADER TRANSFERASE 09-OCT-19 6T2W TITLE CRYSTAL STRUCTURE OF THE CSF1R KINASE DOMAIN WITH A DIHYDROPURINONE TITLE 2 INHIBITOR (COMPOUND 4) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MACROPHAGE COLONY-STIMULATING FACTOR 1 RECEPTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN (AMINO ACIDS Q542-R919) WITH INTERNAL COMPND 5 DELETION OF AMINO ACIDS 697-740; COMPND 6 SYNONYM: CSF-1 RECEPTOR,M-CSF-R,PROTO-ONCOGENE C-FMS; COMPND 7 EC: 2.7.10.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CSF1R, FMS; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HI5; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS KINASE FOLD, TYPE I KINASE INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SCHIMPL,F.W.GOLDBERG,M.R.V.FINLAY,A.K.T.TING,D.BEATTIE,G.M.LAMONT, AUTHOR 2 C.FALLAN,G.L.WRIGLEY,M.R.HOWARD,B.WILLIAMSON,B.R.DAVIES,E.B.CADOGAN, AUTHOR 3 A.RAMOS-MONTOYA,E.DEAN REVDAT 3 22-APR-20 6T2W 1 JRNL REVDAT 2 22-JAN-20 6T2W 1 JRNL REVDAT 1 01-JAN-20 6T2W 0 JRNL AUTH F.W.GOLDBERG,M.R.V.FINLAY,A.K.T.TING,D.BEATTIE,G.M.LAMONT, JRNL AUTH 2 C.FALLAN,G.L.WRIGLEY,M.SCHIMPL,M.R.HOWARD,B.WILLIAMSON, JRNL AUTH 3 M.VAZQUEZ-CHANTADA,D.G.BARRATT,B.R.DAVIES,E.B.CADOGAN, JRNL AUTH 4 A.RAMOS-MONTOYA,E.DEAN JRNL TITL THE DISCOVERY OF JRNL TITL 2 7-METHYL-2-[(7-METHYL[1,2,4]TRIAZOLO[1,5-A]PYRIDIN-6-YL) JRNL TITL 3 AMINO]-9-(TETRAHYDRO-2H-PYRAN-4-YL)-7, JRNL TITL 4 9-DIHYDRO-8H-PURIN-8-ONE (AZD7648), A POTENT AND SELECTIVE JRNL TITL 5 DNA-DEPENDENT PROTEIN KINASE (DNA-PK) INHIBITOR. JRNL REF J.MED.CHEM. V. 63 3461 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 31851518 JRNL DOI 10.1021/ACS.JMEDCHEM.9B01684 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.7 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 3 NUMBER OF REFLECTIONS : 38379 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1872 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 50 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.72 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.32 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 768 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2204 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 721 REMARK 3 BIN R VALUE (WORKING SET) : 0.2184 REMARK 3 BIN FREE R VALUE : 0.2524 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.12 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 47 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2387 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 234 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.45780 REMARK 3 B22 (A**2) : 3.45780 REMARK 3 B33 (A**2) : -6.91550 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.210 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.089 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.085 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.088 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.084 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.952 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2491 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3379 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 840 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 410 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2491 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 312 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3026 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.37 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 17.3442 26.7370 0.7008 REMARK 3 T TENSOR REMARK 3 T11: -0.0418 T22: -0.0394 REMARK 3 T33: -0.0516 T12: 0.0013 REMARK 3 T13: 0.0050 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 1.1799 L22: 0.8259 REMARK 3 L33: 0.2160 L12: 0.3327 REMARK 3 L13: 0.0762 L23: 0.0961 REMARK 3 S TENSOR REMARK 3 S11: -0.0002 S12: -0.0630 S13: -0.0274 REMARK 3 S21: -0.0199 S22: -0.0024 S23: 0.0793 REMARK 3 S31: -0.0024 S32: -0.0148 S33: 0.0026 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6T2W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292104744. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97626 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.23 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38401 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.90 REMARK 200 R MERGE FOR SHELL (I) : 0.47800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: UNPUBLISHED REMARK 200 REMARK 200 REMARK: TRIANGULAR PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG3350, 0.15 M AMMONIUM SULFATE, REMARK 280 0.1 M PCTP PH 5.5, VAPOR DIFFUSION, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.52000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.39423 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 48.66667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 40.52000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 23.39423 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.66667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 40.52000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 23.39423 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.66667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.78847 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 97.33333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 46.78847 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 97.33333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 46.78847 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 97.33333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A1002 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1185 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1318 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 542 REMARK 465 LYS A 543 REMARK 465 PRO A 544 REMARK 465 LYS A 545 REMARK 465 TYR A 546 REMARK 465 GLU A 557 REMARK 465 GLY A 558 REMARK 465 GLY A 730 REMARK 465 PRO A 731 REMARK 465 SER A 732 REMARK 465 LEU A 733 REMARK 465 SER A 734 REMARK 465 PRO A 735 REMARK 465 GLY A 736 REMARK 465 GLN A 737 REMARK 465 ASP A 738 REMARK 465 PRO A 739 REMARK 465 GLU A 740 REMARK 465 GLY A 741 REMARK 465 LEU A 742 REMARK 465 ASP A 743 REMARK 465 LYS A 744 REMARK 465 GLU A 745 REMARK 465 ASP A 746 REMARK 465 GLY A 747 REMARK 465 ASP A 917 REMARK 465 ARG A 918 REMARK 465 ARG A 919 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 559 CG OD1 ND2 REMARK 470 LEU A 683 CG CD1 CD2 REMARK 470 ARG A 748 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 814 CG OD1 ND2 REMARK 470 GLN A 915 CG CD OE1 NE2 REMARK 470 GLU A 916 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 623 -169.93 -122.50 REMARK 500 ASP A 778 44.32 -149.73 REMARK 500 THR A 787 -166.96 -110.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue M9T A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 1005 DBREF 6T2W A 542 919 UNP P07333 CSF1R_HUMAN 542 919 SEQADV 6T2W A UNP P07333 GLY 696 DELETION SEQADV 6T2W A UNP P07333 VAL 697 DELETION SEQADV 6T2W A UNP P07333 ASP 698 DELETION SEQADV 6T2W A UNP P07333 TYR 699 DELETION SEQADV 6T2W A UNP P07333 LYS 700 DELETION SEQADV 6T2W A UNP P07333 ASN 701 DELETION SEQADV 6T2W A UNP P07333 ILE 702 DELETION SEQADV 6T2W A UNP P07333 HIS 703 DELETION SEQADV 6T2W A UNP P07333 LEU 704 DELETION SEQADV 6T2W A UNP P07333 GLU 705 DELETION SEQADV 6T2W A UNP P07333 LYS 706 DELETION SEQADV 6T2W A UNP P07333 LYS 707 DELETION SEQADV 6T2W A UNP P07333 TYR 708 DELETION SEQADV 6T2W A UNP P07333 VAL 709 DELETION SEQADV 6T2W A UNP P07333 ARG 710 DELETION SEQADV 6T2W A UNP P07333 ARG 711 DELETION SEQADV 6T2W A UNP P07333 ASP 712 DELETION SEQADV 6T2W A UNP P07333 SER 713 DELETION SEQADV 6T2W A UNP P07333 GLY 714 DELETION SEQADV 6T2W A UNP P07333 PHE 715 DELETION SEQADV 6T2W A UNP P07333 SER 716 DELETION SEQADV 6T2W A UNP P07333 SER 717 DELETION SEQADV 6T2W A UNP P07333 GLN 718 DELETION SEQADV 6T2W A UNP P07333 GLY 719 DELETION SEQADV 6T2W A UNP P07333 VAL 720 DELETION SEQADV 6T2W A UNP P07333 ASP 721 DELETION SEQADV 6T2W A UNP P07333 THR 722 DELETION SEQADV 6T2W A UNP P07333 TYR 723 DELETION SEQADV 6T2W A UNP P07333 VAL 724 DELETION SEQADV 6T2W A UNP P07333 GLU 725 DELETION SEQADV 6T2W A UNP P07333 MET 726 DELETION SEQADV 6T2W A UNP P07333 ARG 727 DELETION SEQADV 6T2W A UNP P07333 PRO 728 DELETION SEQADV 6T2W A UNP P07333 VAL 729 DELETION SEQADV 6T2W A UNP P07333 SER 730 DELETION SEQADV 6T2W A UNP P07333 THR 731 DELETION SEQADV 6T2W A UNP P07333 SER 732 DELETION SEQADV 6T2W A UNP P07333 SER 733 DELETION SEQADV 6T2W A UNP P07333 ASN 734 DELETION SEQADV 6T2W A UNP P07333 ASP 735 DELETION SEQADV 6T2W A UNP P07333 SER 736 DELETION SEQADV 6T2W A UNP P07333 PHE 737 DELETION SEQADV 6T2W A UNP P07333 SER 738 DELETION SEQADV 6T2W A UNP P07333 GLU 739 DELETION SEQADV 6T2W A UNP P07333 GLN 740 DELETION SEQADV 6T2W A UNP P07333 ASP 741 DELETION SEQRES 1 A 332 GLN LYS PRO LYS TYR GLN VAL ARG TRP LYS ILE ILE GLU SEQRES 2 A 332 SER TYR GLU GLY ASN SER TYR THR PHE ILE ASP PRO THR SEQRES 3 A 332 GLN LEU PRO TYR ASN GLU LYS TRP GLU PHE PRO ARG ASN SEQRES 4 A 332 ASN LEU GLN PHE GLY LYS THR LEU GLY ALA GLY ALA PHE SEQRES 5 A 332 GLY LYS VAL VAL GLU ALA THR ALA PHE GLY LEU GLY LYS SEQRES 6 A 332 GLU ASP ALA VAL LEU LYS VAL ALA VAL LYS MET LEU LYS SEQRES 7 A 332 SER THR ALA HIS ALA ASP GLU LYS GLU ALA LEU MET SER SEQRES 8 A 332 GLU LEU LYS ILE MET SER HIS LEU GLY GLN HIS GLU ASN SEQRES 9 A 332 ILE VAL ASN LEU LEU GLY ALA CYS THR HIS GLY GLY PRO SEQRES 10 A 332 VAL LEU VAL ILE THR GLU TYR CYS CYS TYR GLY ASP LEU SEQRES 11 A 332 LEU ASN PHE LEU ARG ARG LYS ALA GLU ALA MET LEU GLY SEQRES 12 A 332 PRO SER LEU SER PRO GLY GLN ASP PRO GLU GLY LEU ASP SEQRES 13 A 332 LYS GLU ASP GLY ARG PRO LEU GLU LEU ARG ASP LEU LEU SEQRES 14 A 332 HIS PHE SER SER GLN VAL ALA GLN GLY MET ALA PHE LEU SEQRES 15 A 332 ALA SER LYS ASN CYS ILE HIS ARG ASP VAL ALA ALA ARG SEQRES 16 A 332 ASN VAL LEU LEU THR ASN GLY HIS VAL ALA LYS ILE GLY SEQRES 17 A 332 ASP PHE GLY LEU ALA ARG ASP ILE MET ASN ASP SER ASN SEQRES 18 A 332 TYR ILE VAL LYS GLY ASN ALA ARG LEU PRO VAL LYS TRP SEQRES 19 A 332 MET ALA PRO GLU SER ILE PHE ASP CYS VAL TYR THR VAL SEQRES 20 A 332 GLN SER ASP VAL TRP SER TYR GLY ILE LEU LEU TRP GLU SEQRES 21 A 332 ILE PHE SER LEU GLY LEU ASN PRO TYR PRO GLY ILE LEU SEQRES 22 A 332 VAL ASN SER LYS PHE TYR LYS LEU VAL LYS ASP GLY TYR SEQRES 23 A 332 GLN MET ALA GLN PRO ALA PHE ALA PRO LYS ASN ILE TYR SEQRES 24 A 332 SER ILE MET GLN ALA CYS TRP ALA LEU GLU PRO THR HIS SEQRES 25 A 332 ARG PRO THR PHE GLN GLN ILE CYS SER PHE LEU GLN GLU SEQRES 26 A 332 GLN ALA GLN GLU ASP ARG ARG HET M9T A1001 28 HET SO4 A1002 5 HET SO4 A1003 5 HET SO4 A1004 5 HET SO4 A1005 5 HETNAM M9T 2-[(4-METHOXY-2-METHYL-PHENYL)AMINO]-7-METHYL-9-(4- HETNAM 2 M9T OXIDANYLCYCLOHEXYL)PURIN-8-ONE HETNAM SO4 SULFATE ION FORMUL 2 M9T C20 H25 N5 O3 FORMUL 3 SO4 4(O4 S 2-) FORMUL 7 HOH *234(H2 O) HELIX 1 AA1 ASP A 565 LEU A 569 5 5 HELIX 2 AA2 ASN A 572 GLU A 576 5 5 HELIX 3 AA3 PRO A 578 ASN A 580 5 3 HELIX 4 AA4 HIS A 623 GLY A 641 1 19 HELIX 5 AA5 ASP A 670 ALA A 681 1 12 HELIX 6 AA6 GLU A 751 LYS A 772 1 22 HELIX 7 AA7 ALA A 780 ARG A 782 5 3 HELIX 8 AA8 ASN A 788 HIS A 790 5 3 HELIX 9 AA9 PRO A 818 MET A 822 5 5 HELIX 10 AB1 ALA A 823 CYS A 830 1 8 HELIX 11 AB2 THR A 833 SER A 850 1 18 HELIX 12 AB3 ASN A 862 ASP A 871 1 10 HELIX 13 AB4 PRO A 882 TRP A 893 1 12 HELIX 14 AB5 GLU A 896 ARG A 900 5 5 HELIX 15 AB6 THR A 902 GLU A 916 1 15 SHEET 1 AA1 2 LYS A 551 ILE A 552 0 SHEET 2 AA1 2 CYS A 774 ILE A 775 -1 O ILE A 775 N LYS A 551 SHEET 1 AA2 5 LEU A 582 ALA A 590 0 SHEET 2 AA2 5 GLY A 594 LEU A 604 -1 O GLU A 598 N LYS A 586 SHEET 3 AA2 5 ALA A 609 LEU A 618 -1 O VAL A 615 N VAL A 597 SHEET 4 AA2 5 LEU A 660 GLU A 664 -1 O VAL A 661 N LYS A 616 SHEET 5 AA2 5 LEU A 649 CYS A 653 -1 N LEU A 650 O ILE A 662 SHEET 1 AA3 2 VAL A 784 THR A 787 0 SHEET 2 AA3 2 VAL A 791 ILE A 794 -1 O LYS A 793 N LEU A 785 SHEET 1 AA4 2 ILE A 810 LYS A 812 0 SHEET 2 AA4 2 ALA A 815 LEU A 817 -1 O LEU A 817 N ILE A 810 SITE 1 AC1 13 VAL A 596 ALA A 614 LYS A 616 THR A 663 SITE 2 AC1 13 GLU A 664 TYR A 665 CYS A 666 GLY A 669 SITE 3 AC1 13 LEU A 785 PHE A 797 ARG A 801 HOH A1102 SITE 4 AC1 13 HOH A1149 SITE 1 AC2 4 HIS A 655 GLY A 656 HOH A1162 HOH A1252 SITE 1 AC3 9 LYS A 595 LYS A 619 SER A 620 GLN A 877 SITE 2 AC3 9 PRO A 882 LYS A 883 HOH A1104 HOH A1123 SITE 3 AC3 9 HOH A1193 SITE 1 AC4 6 ARG A 676 ASN A 808 ASN A 854 HOH A1175 SITE 2 AC4 6 HOH A1183 HOH A1200 SITE 1 AC5 4 GLN A 547 ARG A 549 LYS A 551 ARG A 777 CRYST1 81.040 81.040 146.000 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012340 0.007124 0.000000 0.00000 SCALE2 0.000000 0.014249 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006849 0.00000