HEADER ANTIMICROBIAL PROTEIN 16-OCT-19 6T5K TITLE ECV-1 FROM ECHINICOLA VIETNAMENSIS. ENVIRONMENTAL METALLO-BETA- TITLE 2 LACTAMASES EXHIBIT HIGH ENZYMATIC ACTIVITY UNDER ZINC DEPRIVATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZN-DEPENDENT HYDROLASE, GLYOXYLASE; COMPND 3 CHAIN: C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ECHINICOLA VIETNAMENSIS; SOURCE 3 ORGANISM_TAXID: 390884; SOURCE 4 GENE: ECHVI_2632; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-LACTAMASE, CARBAPENEMASE, ENVIRONMENTAL, ANTIMICROBIAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.FROHLICH REVDAT 4 24-JAN-24 6T5K 1 REMARK REVDAT 3 02-SEP-20 6T5K 1 JRNL LINK REVDAT 2 10-JUN-20 6T5K 1 JRNL REVDAT 1 27-MAY-20 6T5K 0 JRNL AUTH C.FROHLICH,V.SORUM,S.HUBER,O.SAMUELSEN,F.BERGLUND, JRNL AUTH 2 E.KRISTIANSSON,S.D.KOTSAKIS,N.P.MARATHE,D.G.J.LARSSON, JRNL AUTH 3 H.S.LEIROS JRNL TITL STRUCTURAL AND BIOCHEMICAL CHARACTERIZATION OF THE JRNL TITL 2 ENVIRONMENTAL MBLS MYO-1, ECV-1 AND SHD-1. JRNL REF J.ANTIMICROB.CHEMOTHER. V. 75 2554 2020 JRNL REFN ESSN 1460-2091 JRNL PMID 32464640 JRNL DOI 10.1093/JAC/DKAA175 REMARK 2 REMARK 2 RESOLUTION. 1.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 49509 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.184 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.240 REMARK 3 FREE R VALUE TEST SET COUNT : 2098 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.0800 - 3.2700 1.00 3427 152 0.1442 0.1705 REMARK 3 2 3.2700 - 2.6000 1.00 3314 146 0.1369 0.1729 REMARK 3 3 2.6000 - 2.2700 0.99 3271 145 0.1281 0.1491 REMARK 3 4 2.2700 - 2.0600 1.00 3258 144 0.1200 0.1653 REMARK 3 5 2.0600 - 1.9200 1.00 3254 144 0.1174 0.1569 REMARK 3 6 1.9200 - 1.8000 1.00 3237 144 0.1191 0.1615 REMARK 3 7 1.8000 - 1.7100 1.00 3262 144 0.1341 0.1787 REMARK 3 8 1.7100 - 1.6400 1.00 3231 143 0.1478 0.2149 REMARK 3 9 1.6400 - 1.5700 1.00 3223 143 0.1614 0.2061 REMARK 3 10 1.5700 - 1.5200 1.00 3216 142 0.1793 0.2183 REMARK 3 11 1.5200 - 1.4700 1.00 3231 143 0.2072 0.2767 REMARK 3 12 1.4700 - 1.4300 0.98 3148 140 0.2562 0.3055 REMARK 3 13 1.4300 - 1.3900 0.95 3023 133 0.3101 0.3645 REMARK 3 14 1.3900 - 1.3600 0.87 2834 125 0.0000 0.0000 REMARK 3 15 1.3600 - 1.3300 0.77 2482 110 0.3387 0.3679 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.174 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.026 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1901 REMARK 3 ANGLE : 1.112 2590 REMARK 3 CHIRALITY : 0.089 288 REMARK 3 PLANARITY : 0.008 341 REMARK 3 DIHEDRAL : 18.806 675 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6T5K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292104888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49538 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.330 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.33 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.36 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.30000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ZNB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25-26% PEG3350, ), 0.1 M BIS-TRIS REMARK 280 BUFFER PH 6 AND 0.2 M SODIUM ACETATE, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.25050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.25050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 25.96300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.83800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 25.96300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.83800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.25050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 25.96300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 32.83800 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 64.25050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 25.96300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 32.83800 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C1352 LIES ON A SPECIAL POSITION. REMARK 375 HOH C1489 LIES ON A SPECIAL POSITION. REMARK 375 HOH C1499 LIES ON A SPECIAL POSITION. REMARK 375 HOH C1541 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY C 13 REMARK 465 GLY C 14 REMARK 465 LYS C 15 REMARK 465 SER C 16 REMARK 465 GLU C 17 REMARK 465 LYS C 18 REMARK 465 LEU C 19 REMARK 465 GLN C 20 REMARK 465 GLU C 21 REMARK 465 HIS C 22 REMARK 465 LEU C 23 REMARK 465 VAL C 24 REMARK 465 ALA C 25 REMARK 465 GLU C 26 REMARK 465 GLN C 27 REMARK 465 THR C 28 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 SER C 29 CB OG REMARK 480 LYS C 34 CD CE NZ REMARK 480 LYS C 45 CD CE NZ REMARK 480 GLU C 91 OE2 REMARK 480 GLU C 102 CD OE1 OE2 REMARK 480 LYS C 170 NZ REMARK 480 VAL C 187 N CA C O CB CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER C 89 O HOH C 1305 1.58 REMARK 500 O HOH C 1341 O HOH C 1348 1.69 REMARK 500 O HOH C 1518 O HOH C 1537 1.98 REMARK 500 OD1 ASP C 210 O HOH C 1301 2.00 REMARK 500 O HOH C 1314 O HOH C 1427 2.00 REMARK 500 O HOH C 1545 O HOH C 1548 2.07 REMARK 500 O HOH C 1344 O HOH C 1480 2.09 REMARK 500 O HOH C 1428 O HOH C 1433 2.10 REMARK 500 O HOH C 1490 O HOH C 1504 2.17 REMARK 500 OE2 GLU C 91 O HOH C 1302 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH C 1306 O HOH C 1341 4566 2.17 REMARK 500 O HOH C 1306 O HOH C 1306 4566 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP C 84 141.62 72.20 REMARK 500 SER C1173 -56.20 -121.09 REMARK 500 ASP C 173 -79.93 -155.55 REMARK 500 ASP C 279 -160.36 -108.12 REMARK 500 ASP C 279 -160.92 -108.12 REMARK 500 ASP C 279 -161.14 -108.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH C1553 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH C1554 DISTANCE = 6.45 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1206 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 116 NE2 REMARK 620 2 HIS C 118 ND1 98.0 REMARK 620 3 HIS C 196 NE2 100.2 109.8 REMARK 620 4 HOH C1336 O 117.5 115.3 114.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1207 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 120 OD2 REMARK 620 2 CYS C 221 SG 101.6 REMARK 620 3 HIS C 263 NE2 88.9 102.4 REMARK 620 4 HOH C1336 O 81.2 116.6 140.9 REMARK 620 5 HOH C1438 O 159.3 97.7 79.7 96.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 1206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 1207 DBREF 6T5K C 13 291 UNP L0FY79 L0FY79_ECHVK 18 257 SEQRES 1 C 240 GLY GLY LYS SER GLU LYS LEU GLN GLU HIS LEU VAL ALA SEQRES 2 C 240 GLU GLN THR SER THR PHE THR GLU LYS GLU VAL TYR SER SEQRES 3 C 240 SER ASP LYS LEU ILE ILE LYS GLN VAL SER PRO HIS THR SEQRES 4 C 240 TYR VAL HIS VAL SER PHE LEU ASP THR ASP THR PHE GLY SEQRES 5 C 240 LYS VAL ALA CYS ASN GLY MET ILE VAL ILE SER ASP GLY SEQRES 6 C 240 GLU ALA VAL VAL PHE ASP THR PRO SER THR SER ASN GLU SEQRES 7 C 240 THR SER GLU LEU LEU SER PHE LEU GLU GLU GLU LYS LEU SEQRES 8 C 240 GLN VAL ASN ALA VAL VAL ALA THR HIS PHE HIS LEU ASP SEQRES 9 C 240 CYS LEU GLY GLY LEU GLU ALA PHE HIS ALA ARG ASN ILE SEQRES 10 C 240 PRO SER TYR ALA PHE LYS ASN THR LEU SER LEU ALA SER SEQRES 11 C 240 GLN HIS ASP PHE PRO GLN PRO GLN LYS GLY PHE SER ASP SEQRES 12 C 240 GLU LEU THR LEU LYS VAL GLY THR LYS ALA VAL PHE VAL SEQRES 13 C 240 HIS TYR PHE GLY GLU GLY HIS THR GLN ASP ASN VAL ILE SEQRES 14 C 240 GLY TYR PHE PRO ASP ASP GLN VAL LEU PHE GLY GLY CYS SEQRES 15 C 240 LEU ILE LYS ALA ASN GLY ALA GLY LYS GLY ASN LEU GLU SEQRES 16 C 240 ASP ALA ASN VAL GLU ALA TRP PRO VAL THR VAL ASN LYS SEQRES 17 C 240 ILE SER THR ALA TYR PRO ASN LEU ARG LEU VAL ILE PRO SEQRES 18 C 240 GLY HIS GLY ASN TRP GLY ASP LYS THR LEU LEU HIS TYR SEQRES 19 C 240 THR GLU THR LEU PHE LYS HET EDO C1201 10 HET EDO C1202 10 HET EDO C1203 10 HET EDO C1204 10 HET EDO C1205 10 HET ZN C1206 1 HET ZN C1207 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM ZN ZINC ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 5(C2 H6 O2) FORMUL 7 ZN 2(ZN 2+) FORMUL 9 HOH *254(H2 O) HELIX 1 AA1 THR C 88 GLU C 103 1 15 HELIX 2 AA2 HIS C 118 GLY C 123 1 6 HELIX 3 AA3 GLY C 124 ARG C 131 1 8 HELIX 4 AA4 LYS C 140 HIS C 149 1 10 HELIX 5 AA5 PRO C 209 ASP C 211 5 3 HELIX 6 AA6 CYS C 221 ILE C 223 5 3 HELIX 7 AA7 GLU C 240 TYR C 253 1 14 HELIX 8 AA8 LYS C 280 LYS C 291 1 12 SHEET 1 AA1 8 LYS C 34 SER C 38 0 SHEET 2 AA1 8 LEU C 42 GLN C 46 -1 O GLN C 46 N LYS C 34 SHEET 3 AA1 8 THR C 52 THR C 61 -1 O VAL C 56 N ILE C 43 SHEET 4 AA1 8 GLY C 65 SER C 76 -1 O VAL C 67 N LEU C 59 SHEET 5 AA1 8 GLU C 79 PHE C 83 -1 O PHE C 83 N MET C 72 SHEET 6 AA1 8 GLN C 107 VAL C 113 1 O ASN C 110 N ALA C 80 SHEET 7 AA1 8 SER C 136 PHE C 139 1 O TYR C 137 N VAL C 112 SHEET 8 AA1 8 LYS C 170 PHE C 172 1 O LYS C 170 N SER C 136 SHEET 1 AA2 5 GLU C 174 VAL C 179 0 SHEET 2 AA2 5 LYS C 182 HIS C 190 -1 O VAL C 187 N LEU C 177 SHEET 3 AA2 5 ILE C 202 PHE C 205 -1 O TYR C 204 N PHE C 188 SHEET 4 AA2 5 VAL C 216 GLY C 220 -1 O PHE C 218 N GLY C 203 SHEET 5 AA2 5 LEU C 258 PRO C 261 1 O ILE C 260 N LEU C 217 LINK NE2 HIS C 116 ZN ZN C1206 1555 1555 2.06 LINK ND1 HIS C 118 ZN ZN C1206 1555 1555 2.04 LINK OD2 ASP C 120 ZN ZN C1207 1555 1555 2.29 LINK NE2 HIS C 196 ZN ZN C1206 1555 1555 2.01 LINK SG CYS C 221 ZN ZN C1207 1555 1555 2.10 LINK NE2 HIS C 263 ZN ZN C1207 1555 1555 2.19 LINK ZN ZN C1206 O HOH C1336 1555 1555 1.90 LINK ZN ZN C1207 O HOH C1336 1555 1555 2.13 LINK ZN ZN C1207 O HOH C1438 1555 1555 2.30 SITE 1 AC1 8 GLU C 194 ASP C 236 ALA C 237 ASN C 238 SITE 2 AC1 8 LYS C 280 HIS C 284 HOH C1363 HOH C1482 SITE 1 AC2 6 GLU C 174 HIS C 190 TYR C 204 ALA C 252 SITE 2 AC2 6 HOH C1317 HOH C1352 SITE 1 AC3 7 GLU C 100 GLU C 126 HIS C 129 ALA C 130 SITE 2 AC3 7 ARG C 131 ASN C 133 HOH C1468 SITE 1 AC4 5 ASN C 110 LEU C 177 LYS C 178 HOH C1311 SITE 2 AC4 5 HOH C1316 SITE 1 AC5 4 GLU C 126 HIS C 129 PRO C 166 GLN C 167 SITE 1 AC6 5 HIS C 116 HIS C 118 HIS C 196 ZN C1207 SITE 2 AC6 5 HOH C1336 SITE 1 AC7 6 ASP C 120 CYS C 221 HIS C 263 ZN C1206 SITE 2 AC7 6 HOH C1336 HOH C1438 CRYST1 51.926 65.676 128.501 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019258 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015226 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007782 0.00000