HEADER HYDROLASE 20-OCT-19 6T6Y TITLE STRUCTURE OF THE BOTTROMYCIN EPIMERASE BOTH IN COMPLEX WITH TITLE 2 BOTTROMYCIN A2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BOTH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. BC16019; SOURCE 3 ORGANISM_TAXID: 1109705; SOURCE 4 GENE: BOTH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA 2 KEYWDS BOTTROMYCIN, RIPP, EPIMERASE, ABH, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOEHNKE,A.SIKANDAR REVDAT 3 24-JAN-24 6T6Y 1 REMARK REVDAT 2 26-AUG-20 6T6Y 1 JRNL REVDAT 1 15-JUL-20 6T6Y 0 JRNL AUTH A.SIKANDAR,L.FRANZ,S.ADAM,J.SANTOS-ABERTURAS,L.HORBAL, JRNL AUTH 2 A.LUZHETSKYY,A.W.TRUMAN,O.V.KALININA,J.KOEHNKE JRNL TITL THE BOTTROMYCIN EPIMERASE BOTH DEFINES A GROUP OF ATYPICAL JRNL TITL 2 ALPHA / BETA-HYDROLASE-FOLD ENZYMES. JRNL REF NAT.CHEM.BIOL. V. 16 1013 2020 JRNL REFN ESSN 1552-4469 JRNL PMID 32601484 JRNL DOI 10.1038/S41589-020-0569-Y REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.71 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 47297 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2373 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7100 - 3.6000 0.99 2784 146 0.1715 0.1886 REMARK 3 2 3.6000 - 2.8600 1.00 2708 147 0.1510 0.1788 REMARK 3 3 2.8600 - 2.5000 0.98 2646 142 0.1468 0.1631 REMARK 3 4 2.5000 - 2.2700 0.99 2659 141 0.1428 0.1745 REMARK 3 5 2.2700 - 2.1100 1.00 2628 158 0.1407 0.1583 REMARK 3 6 2.1100 - 1.9800 1.00 2668 125 0.1395 0.1880 REMARK 3 7 1.9800 - 1.8800 0.99 2646 137 0.1461 0.1760 REMARK 3 8 1.8800 - 1.8000 0.99 2605 144 0.1547 0.1792 REMARK 3 9 1.8000 - 1.7300 0.99 2636 156 0.1630 0.1589 REMARK 3 10 1.7300 - 1.6700 0.99 2606 145 0.1633 0.1932 REMARK 3 11 1.6700 - 1.6200 1.00 2651 131 0.1686 0.1883 REMARK 3 12 1.6200 - 1.5700 1.00 2614 145 0.1682 0.1953 REMARK 3 13 1.5700 - 1.5300 0.99 2619 127 0.1900 0.2034 REMARK 3 14 1.5300 - 1.4900 0.99 2599 136 0.1959 0.2262 REMARK 3 15 1.4900 - 1.4600 0.99 2617 140 0.2050 0.2521 REMARK 3 16 1.4600 - 1.4300 0.99 2605 122 0.2201 0.2300 REMARK 3 17 1.4300 - 1.4000 0.99 2633 131 0.2282 0.2625 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.117 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.534 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 2045 REMARK 3 ANGLE : 1.426 2780 REMARK 3 CHIRALITY : 0.106 295 REMARK 3 PLANARITY : 0.013 375 REMARK 3 DIHEDRAL : 15.669 726 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.9378 -3.9222 -6.2245 REMARK 3 T TENSOR REMARK 3 T11: 0.1285 T22: 0.1314 REMARK 3 T33: 0.1159 T12: 0.0173 REMARK 3 T13: 0.0136 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 1.8450 L22: 5.4227 REMARK 3 L33: 2.2478 L12: 0.6881 REMARK 3 L13: -0.0078 L23: 0.4235 REMARK 3 S TENSOR REMARK 3 S11: -0.0243 S12: -0.1179 S13: -0.0440 REMARK 3 S21: 0.0816 S22: -0.0423 S23: 0.1903 REMARK 3 S31: -0.0099 S32: -0.0828 S33: -0.0025 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9788 -13.2279 -13.5947 REMARK 3 T TENSOR REMARK 3 T11: 0.0971 T22: 0.1011 REMARK 3 T33: 0.1191 T12: 0.0210 REMARK 3 T13: -0.0011 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 2.1644 L22: 3.4254 REMARK 3 L33: 3.6959 L12: 0.0556 REMARK 3 L13: -0.6260 L23: -0.8614 REMARK 3 S TENSOR REMARK 3 S11: 0.0079 S12: -0.0856 S13: -0.1821 REMARK 3 S21: 0.0402 S22: 0.0138 S23: 0.1627 REMARK 3 S31: 0.1085 S32: -0.0835 S33: -0.0034 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8758 -19.2874 -10.6163 REMARK 3 T TENSOR REMARK 3 T11: 0.1508 T22: 0.1351 REMARK 3 T33: 0.1771 T12: -0.0432 REMARK 3 T13: -0.0200 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 1.7185 L22: 3.2490 REMARK 3 L33: 5.0642 L12: -1.1239 REMARK 3 L13: -0.4715 L23: -0.0774 REMARK 3 S TENSOR REMARK 3 S11: 0.0534 S12: 0.0388 S13: -0.2721 REMARK 3 S21: 0.1626 S22: 0.1062 S23: 0.0795 REMARK 3 S31: 0.5483 S32: -0.4885 S33: 0.0256 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.7344 2.5973 -15.7860 REMARK 3 T TENSOR REMARK 3 T11: 0.1224 T22: 0.1060 REMARK 3 T33: 0.1166 T12: 0.0184 REMARK 3 T13: -0.0038 T23: -0.0212 REMARK 3 L TENSOR REMARK 3 L11: 6.2584 L22: 4.4716 REMARK 3 L33: 5.4417 L12: 1.8443 REMARK 3 L13: -2.7810 L23: -2.8462 REMARK 3 S TENSOR REMARK 3 S11: -0.0861 S12: 0.1579 S13: 0.2484 REMARK 3 S21: -0.1084 S22: 0.0867 S23: 0.0085 REMARK 3 S31: -0.0589 S32: -0.0791 S33: -0.0333 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5032 -5.3236 -4.9495 REMARK 3 T TENSOR REMARK 3 T11: 0.1495 T22: 0.1276 REMARK 3 T33: 0.1239 T12: 0.0264 REMARK 3 T13: -0.0143 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 3.8517 L22: 3.0329 REMARK 3 L33: 5.9376 L12: 0.2503 REMARK 3 L13: -1.0286 L23: -1.7273 REMARK 3 S TENSOR REMARK 3 S11: -0.0068 S12: -0.2392 S13: 0.0177 REMARK 3 S21: 0.2075 S22: -0.1288 S23: -0.0774 REMARK 3 S31: 0.0982 S32: 0.2248 S33: 0.0960 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8612 -6.5847 -21.9076 REMARK 3 T TENSOR REMARK 3 T11: 0.1470 T22: 0.1470 REMARK 3 T33: 0.1453 T12: 0.0190 REMARK 3 T13: 0.0224 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.4691 L22: 1.3407 REMARK 3 L33: 0.8327 L12: -0.5394 REMARK 3 L13: 0.2438 L23: -0.3709 REMARK 3 S TENSOR REMARK 3 S11: 0.0354 S12: 0.1991 S13: 0.0647 REMARK 3 S21: -0.1826 S22: -0.0681 S23: -0.1369 REMARK 3 S31: 0.0150 S32: 0.0811 S33: 0.0502 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.1011 -9.5140 -27.6512 REMARK 3 T TENSOR REMARK 3 T11: 0.1358 T22: 0.1737 REMARK 3 T33: 0.1413 T12: 0.0051 REMARK 3 T13: -0.0062 T23: -0.0284 REMARK 3 L TENSOR REMARK 3 L11: 3.6913 L22: 7.0636 REMARK 3 L33: 4.2010 L12: -1.7292 REMARK 3 L13: 0.4071 L23: 1.9455 REMARK 3 S TENSOR REMARK 3 S11: 0.0339 S12: 0.2431 S13: -0.1863 REMARK 3 S21: -0.2927 S22: -0.0035 S23: 0.1887 REMARK 3 S31: 0.0971 S32: -0.0479 S33: 0.0480 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6262 -3.6574 -16.3111 REMARK 3 T TENSOR REMARK 3 T11: 0.1536 T22: 0.1763 REMARK 3 T33: 0.1878 T12: 0.0089 REMARK 3 T13: 0.0137 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 2.7225 L22: 3.0701 REMARK 3 L33: 1.7950 L12: -1.8512 REMARK 3 L13: 1.2107 L23: -1.1976 REMARK 3 S TENSOR REMARK 3 S11: -0.0817 S12: -0.0833 S13: 0.2479 REMARK 3 S21: 0.0109 S22: 0.0269 S23: -0.3847 REMARK 3 S31: 0.0119 S32: 0.0656 S33: 0.0323 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6161 -19.7282 -22.0473 REMARK 3 T TENSOR REMARK 3 T11: 0.1603 T22: 0.1527 REMARK 3 T33: 0.1775 T12: 0.0315 REMARK 3 T13: 0.0278 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 3.0331 L22: 2.0183 REMARK 3 L33: 1.8086 L12: 0.2826 REMARK 3 L13: 0.4341 L23: 0.4629 REMARK 3 S TENSOR REMARK 3 S11: -0.0695 S12: 0.1604 S13: -0.0740 REMARK 3 S21: -0.0706 S22: 0.1129 S23: -0.1683 REMARK 3 S31: 0.0897 S32: 0.1717 S33: -0.0546 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 243 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6174 -23.2955 -19.8960 REMARK 3 T TENSOR REMARK 3 T11: 0.1843 T22: 0.1156 REMARK 3 T33: 0.1595 T12: 0.0161 REMARK 3 T13: 0.0094 T23: -0.0463 REMARK 3 L TENSOR REMARK 3 L11: 4.0364 L22: 5.2324 REMARK 3 L33: 2.6557 L12: 0.9615 REMARK 3 L13: -1.7099 L23: -3.3310 REMARK 3 S TENSOR REMARK 3 S11: -0.0524 S12: 0.0417 S13: -0.2241 REMARK 3 S21: -0.1651 S22: -0.0105 S23: 0.0154 REMARK 3 S31: 0.1830 S32: 0.0627 S33: 0.0815 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6T6Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292104929. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.972420 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47303 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 44.710 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.80000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6T6H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, AMMONIUM SULFATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.49300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.05450 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.71000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.49300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.05450 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.71000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.49300 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 40.05450 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.71000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.49300 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 40.05450 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.71000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 402 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 435 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 449 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 517 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 580 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 593 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 594 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 596 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 ARG A 2 REMARK 465 ASP A 3 REMARK 465 GLY A 4 REMARK 465 ASN A 5 REMARK 465 GLY A 6 REMARK 465 THR A 7 REMARK 465 SER A 8 REMARK 465 ARG A 9 REMARK 465 GLU A 263 REMARK 465 GLY A 264 REMARK 465 GLY A 265 REMARK 465 HIS A 266 REMARK 465 GLY A 267 REMARK 465 THR A 268 REMARK 465 GLY A 269 REMARK 465 ASP A 270 REMARK 465 ALA A 271 REMARK 465 PRO A 272 REMARK 465 ALA A 273 REMARK 465 GLU A 274 REMARK 465 ALA A 275 REMARK 465 ARG A 276 REMARK 465 THR A 277 REMARK 465 THR A 278 REMARK 465 GLY A 279 REMARK 465 ASP A 280 REMARK 465 ALA A 281 REMARK 465 PRO A 282 REMARK 465 ALA A 283 REMARK 465 GLU A 284 REMARK 465 ALA A 285 REMARK 465 ARG A 286 REMARK 465 ALA A 287 REMARK 465 SER A 288 REMARK 465 GLY A 289 REMARK 465 THR A 290 REMARK 465 GLY A 291 REMARK 465 VAL A 292 REMARK 465 VAL A 293 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H ASP A 59 O HOH A 409 1.47 REMARK 500 O HOH A 562 O HOH A 576 1.90 REMARK 500 O HOH A 602 O HOH A 617 1.95 REMARK 500 OE1 GLU A 252 O HOH A 401 1.95 REMARK 500 O HOH A 504 O HOH A 516 2.02 REMARK 500 OD1 ASP A 11 O HOH A 403 2.03 REMARK 500 N ARG A 10 O HOH A 404 2.04 REMARK 500 O HOH A 409 O HOH A 601 2.05 REMARK 500 O HOH A 526 O HOH A 570 2.06 REMARK 500 OD1 ASP A 55 O HOH A 405 2.11 REMARK 500 O HOH A 519 O HOH A 612 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 617 O HOH A 617 4555 1.26 REMARK 500 O HOH A 530 O HOH A 564 2455 1.98 REMARK 500 O HOH A 554 O HOH A 612 8544 2.07 REMARK 500 O HOH A 457 O HOH A 491 8544 2.08 REMARK 500 OE1 GLU A 80 NH2 ARG A 249 7454 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 178 CB CYS A 178 SG -0.105 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 42 41.25 -98.05 REMARK 500 VAL A 76 -70.98 -123.31 REMARK 500 PHE A 109 -125.64 58.21 REMARK 500 HIS A 195 62.75 -116.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 45 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MQH A 301 DBREF 6T6Y A 2 293 UNP K4MHV9 K4MHV9_9ACTN 2 293 SEQADV 6T6Y HIS A -16 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y HIS A -15 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y HIS A -14 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y HIS A -13 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y HIS A -12 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y HIS A -11 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y SER A -10 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y SER A -9 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y GLY A -8 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y LEU A -7 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y VAL A -6 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y PRO A -5 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y ARG A -4 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y GLY A -3 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y SER A -2 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y HIS A -1 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y MET A 0 UNP K4MHV9 EXPRESSION TAG SEQADV 6T6Y VAL A 1 UNP K4MHV9 EXPRESSION TAG SEQRES 1 A 310 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 310 GLY SER HIS MET VAL ARG ASP GLY ASN GLY THR SER ARG SEQRES 3 A 310 ARG ASP VAL PHE GLU VAL PHE SER ARG ASP GLY THR PRO SEQRES 4 A 310 ILE ARG GLY PHE SER ARG PRO GLY PRO GLY GLU THR VAL SEQRES 5 A 310 VAL LEU VAL HIS GLY VAL ALA MET ASP ARG ARG ILE TRP SEQRES 6 A 310 ALA GLU SER GLY PHE LEU ASP ALA LEU PRO ASP ALA HIS SEQRES 7 A 310 VAL LEU ALA LEU ASP LEU ARG GLY ARG GLY GLU SER GLY SEQRES 8 A 310 ARG VAL GLY THR ALA GLU GLY HIS ALA LEU ARG ARG TYR SEQRES 9 A 310 VAL GLU ASP VAL ARG ALA VAL LEU ASP ARG PHE GLY ARG SEQRES 10 A 310 ALA ARG TYR SER LEU PHE GLY THR PHE PHE GLY GLY ARG SEQRES 11 A 310 ILE ALA LEU GLN VAL ALA ALA VAL ASP THR ARG VAL ALA SEQRES 12 A 310 ARG ALA PHE SER PHE CYS ALA HIS ALA GLU GLN VAL GLU SEQRES 13 A 310 ILE PRO GLU ASP ALA VAL GLU GLU GLU ALA VAL ALA VAL SEQRES 14 A 310 GLU GLY PRO GLY GLY HIS ALA TYR LEU ARG ASP HIS PHE SEQRES 15 A 310 THR GLY ARG GLY ALA PRO PRO TRP MET VAL GLU ALA CYS SEQRES 16 A 310 ALA ARG VAL ASP PRO GLY GLU LEU GLY ALA ALA THR ARG SEQRES 17 A 310 GLY LEU LEU HIS GLY SER ASP ARG ARG THR GLU ARG GLY SEQRES 18 A 310 HIS PRO ASP GLN GLU LEU VAL LEU ILE THR ALA ASP GLY SEQRES 19 A 310 ASP ALA ASP LEU ALA PRO PHE HIS ALA GLY GLU ARG ARG SEQRES 20 A 310 LEU GLY ALA HIS LEU TRP LEU VAL ASP ALA PRO THR ARG SEQRES 21 A 310 ILE LYS ALA ALA GLY ARG LEU ALA GLU VAL GLY ARG ARG SEQRES 22 A 310 VAL ALA GLY VAL LEU ALA GLU GLY GLY HIS GLY THR GLY SEQRES 23 A 310 ASP ALA PRO ALA GLU ALA ARG THR THR GLY ASP ALA PRO SEQRES 24 A 310 ALA GLU ALA ARG ALA SER GLY THR GLY VAL VAL HET MQH A 301 120 HETNAM MQH BOTTROMYCIN A2 FORMUL 2 MQH C42 H62 N8 O7 S FORMUL 3 HOH *225(H2 O) HELIX 1 AA1 ARG A 46 SER A 51 1 6 HELIX 2 AA2 PHE A 53 LEU A 57 5 5 HELIX 3 AA3 ALA A 79 HIS A 82 5 4 HELIX 4 AA4 ALA A 83 GLY A 99 1 17 HELIX 5 AA5 PHE A 109 ASP A 122 1 14 HELIX 6 AA6 PRO A 141 GLY A 154 1 14 HELIX 7 AA7 GLY A 156 ARG A 168 1 13 HELIX 8 AA8 PRO A 171 CYS A 178 1 8 HELIX 9 AA9 ALA A 179 VAL A 181 5 3 HELIX 10 AB1 ASP A 182 LEU A 193 1 12 HELIX 11 AB2 LEU A 221 GLY A 232 1 12 HELIX 12 AB3 THR A 242 ALA A 247 1 6 HELIX 13 AB4 ARG A 249 ALA A 262 1 14 SHEET 1 AA1 8 ASP A 11 PHE A 16 0 SHEET 2 AA1 8 PRO A 22 ARG A 28 -1 O ILE A 23 N VAL A 15 SHEET 3 AA1 8 HIS A 61 LEU A 65 -1 O VAL A 62 N ARG A 28 SHEET 4 AA1 8 THR A 34 VAL A 38 1 N VAL A 35 O LEU A 63 SHEET 5 AA1 8 TYR A 103 THR A 108 1 O SER A 104 N VAL A 36 SHEET 6 AA1 8 VAL A 125 PHE A 131 1 O PHE A 131 N GLY A 107 SHEET 7 AA1 8 GLU A 209 ALA A 215 1 O VAL A 211 N ALA A 128 SHEET 8 AA1 8 HIS A 234 VAL A 238 1 O HIS A 234 N LEU A 212 SITE 1 AC1 11 PHE A 110 ARG A 113 PRO A 141 GLU A 148 SITE 2 AC1 11 HIS A 164 PHE A 165 MET A 174 THR A 190 SITE 3 AC1 11 LEU A 193 ILE A 244 HOH A 414 CRYST1 66.986 80.109 89.420 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014928 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012483 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011183 0.00000