HEADER HYDROLASE 20-OCT-19 6T70 TITLE STRUCTURE OF THE BOTTROMYCIN EPIMERASE BOTH IN COMPLEX WITH TITLE 2 BOTTROMYCIN A2 DERIVATIVE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BOTH; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES SP. BC16019; SOURCE 3 ORGANISM_TAXID: 1109705; SOURCE 4 GENE: BOTH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA 2 KEYWDS BOTTROMYCIN, RIPP, EPIMERASE, ABH, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOEHNKE,A.SIKANDAR REVDAT 3 24-JAN-24 6T70 1 REMARK REVDAT 2 26-AUG-20 6T70 1 JRNL LINK REVDAT 1 15-JUL-20 6T70 0 JRNL AUTH A.SIKANDAR,L.FRANZ,S.ADAM,J.SANTOS-ABERTURAS,L.HORBAL, JRNL AUTH 2 A.LUZHETSKYY,A.W.TRUMAN,O.V.KALININA,J.KOEHNKE JRNL TITL THE BOTTROMYCIN EPIMERASE BOTH DEFINES A GROUP OF ATYPICAL JRNL TITL 2 ALPHA / BETA-HYDROLASE-FOLD ENZYMES. JRNL REF NAT.CHEM.BIOL. V. 16 1013 2020 JRNL REFN ESSN 1552-4469 JRNL PMID 32601484 JRNL DOI 10.1038/S41589-020-0569-Y REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR. D BIOL. V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR. REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 32377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.2200 - 3.6200 0.99 2695 152 0.1568 0.1934 REMARK 3 2 3.6200 - 2.8700 0.99 2595 137 0.1540 0.1667 REMARK 3 3 2.8700 - 2.5100 1.00 2561 153 0.1518 0.1836 REMARK 3 4 2.5100 - 2.2800 1.00 2554 131 0.1562 0.2000 REMARK 3 5 2.2800 - 2.1200 1.00 2578 135 0.1579 0.2160 REMARK 3 6 2.1200 - 1.9900 1.00 2540 133 0.1611 0.1842 REMARK 3 7 1.9900 - 1.8900 1.00 2547 123 0.1749 0.2257 REMARK 3 8 1.8900 - 1.8100 1.00 2564 142 0.1909 0.2171 REMARK 3 9 1.8100 - 1.7400 1.00 2534 129 0.2042 0.2409 REMARK 3 10 1.7400 - 1.6800 1.00 2544 126 0.2194 0.2758 REMARK 3 11 1.6800 - 1.6300 1.00 2495 148 0.2373 0.2565 REMARK 3 12 1.6300 - 1.5800 1.00 2522 139 0.2392 0.3021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.151 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.026 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2057 REMARK 3 ANGLE : 1.254 2791 REMARK 3 CHIRALITY : 0.066 294 REMARK 3 PLANARITY : 0.008 375 REMARK 3 DIHEDRAL : 14.659 1175 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9014 -8.1231 -11.3881 REMARK 3 T TENSOR REMARK 3 T11: 0.1111 T22: 0.1366 REMARK 3 T33: 0.1076 T12: 0.0099 REMARK 3 T13: -0.0036 T23: -0.0075 REMARK 3 L TENSOR REMARK 3 L11: 1.1900 L22: 3.4708 REMARK 3 L33: 1.0571 L12: 0.2724 REMARK 3 L13: -0.3025 L23: -0.1929 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: -0.0499 S13: -0.0281 REMARK 3 S21: 0.0988 S22: -0.0122 S23: 0.1044 REMARK 3 S31: 0.0567 S32: -0.0382 S33: -0.0025 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1178 -5.2138 -5.0242 REMARK 3 T TENSOR REMARK 3 T11: 0.1379 T22: 0.1123 REMARK 3 T33: 0.0979 T12: 0.0224 REMARK 3 T13: -0.0158 T23: -0.0467 REMARK 3 L TENSOR REMARK 3 L11: 7.2975 L22: 4.4844 REMARK 3 L33: 6.8413 L12: -0.8861 REMARK 3 L13: -1.2539 L23: -0.6561 REMARK 3 S TENSOR REMARK 3 S11: -0.0729 S12: -0.3716 S13: -0.0002 REMARK 3 S21: 0.2610 S22: -0.0960 S23: 0.0369 REMARK 3 S31: 0.1364 S32: 0.3152 S33: 0.0928 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6091 -6.4975 -21.8593 REMARK 3 T TENSOR REMARK 3 T11: 0.1466 T22: 0.1476 REMARK 3 T33: 0.1416 T12: 0.0042 REMARK 3 T13: 0.0071 T23: -0.0187 REMARK 3 L TENSOR REMARK 3 L11: 1.7726 L22: 1.3108 REMARK 3 L33: 0.1059 L12: -0.5135 REMARK 3 L13: 0.1913 L23: -0.1481 REMARK 3 S TENSOR REMARK 3 S11: 0.0005 S12: 0.1884 S13: 0.0620 REMARK 3 S21: -0.1087 S22: -0.0340 S23: -0.1228 REMARK 3 S31: -0.0143 S32: 0.0752 S33: 0.0311 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.7942 -9.5753 -27.5513 REMARK 3 T TENSOR REMARK 3 T11: 0.1284 T22: 0.1468 REMARK 3 T33: 0.1488 T12: -0.0165 REMARK 3 T13: -0.0171 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 4.1111 L22: 5.9558 REMARK 3 L33: 9.5429 L12: -4.7845 REMARK 3 L13: -4.9217 L23: 6.9820 REMARK 3 S TENSOR REMARK 3 S11: -0.0633 S12: 0.1983 S13: -0.1977 REMARK 3 S21: -0.1290 S22: -0.1040 S23: 0.1451 REMARK 3 S31: 0.2515 S32: -0.1865 S33: 0.1760 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3066 -3.6917 -16.2385 REMARK 3 T TENSOR REMARK 3 T11: 0.1581 T22: 0.1413 REMARK 3 T33: 0.1347 T12: -0.0041 REMARK 3 T13: 0.0044 T23: -0.0554 REMARK 3 L TENSOR REMARK 3 L11: 8.0395 L22: 8.4218 REMARK 3 L33: 6.1305 L12: -7.1994 REMARK 3 L13: 6.2517 L23: -6.4175 REMARK 3 S TENSOR REMARK 3 S11: -0.1569 S12: -0.0430 S13: 0.3928 REMARK 3 S21: 0.1254 S22: -0.0162 S23: -0.5405 REMARK 3 S31: -0.0895 S32: 0.1096 S33: 0.1487 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 209 THROUGH 242 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3467 -19.6350 -21.9236 REMARK 3 T TENSOR REMARK 3 T11: 0.1291 T22: 0.0938 REMARK 3 T33: 0.1489 T12: 0.0493 REMARK 3 T13: 0.0240 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 7.1690 L22: 3.4555 REMARK 3 L33: 6.2621 L12: 3.0117 REMARK 3 L13: 3.2525 L23: 2.6325 REMARK 3 S TENSOR REMARK 3 S11: -0.1065 S12: 0.1549 S13: -0.0634 REMARK 3 S21: -0.0937 S22: 0.1300 S23: -0.2266 REMARK 3 S31: 0.0370 S32: 0.1398 S33: -0.0313 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 243 THROUGH 262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2569 -23.2017 -19.6032 REMARK 3 T TENSOR REMARK 3 T11: 0.1854 T22: 0.0900 REMARK 3 T33: 0.1447 T12: 0.0079 REMARK 3 T13: 0.0242 T23: -0.0451 REMARK 3 L TENSOR REMARK 3 L11: 4.2576 L22: 7.4512 REMARK 3 L33: 3.7576 L12: 1.7303 REMARK 3 L13: -2.1124 L23: -5.1162 REMARK 3 S TENSOR REMARK 3 S11: -0.1683 S12: -0.0125 S13: -0.2077 REMARK 3 S21: -0.2764 S22: 0.0674 S23: -0.0693 REMARK 3 S31: 0.1906 S32: -0.0399 S33: 0.0550 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6T70 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292104928. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000031 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32388 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 44.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.71200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6T6H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MES, AMMONIUM SULFATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.27200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.71500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.22200 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.27200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 39.71500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.22200 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.27200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 39.71500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.22200 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.27200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 39.71500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.22200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -42.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN A 304 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 463 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 490 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 551 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 559 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 575 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 583 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 ARG A 2 REMARK 465 ASP A 3 REMARK 465 GLY A 4 REMARK 465 ASN A 5 REMARK 465 GLY A 6 REMARK 465 THR A 7 REMARK 465 SER A 8 REMARK 465 ARG A 9 REMARK 465 GLU A 263 REMARK 465 GLY A 264 REMARK 465 GLY A 265 REMARK 465 HIS A 266 REMARK 465 GLY A 267 REMARK 465 THR A 268 REMARK 465 GLY A 269 REMARK 465 ASP A 270 REMARK 465 ALA A 271 REMARK 465 PRO A 272 REMARK 465 ALA A 273 REMARK 465 GLU A 274 REMARK 465 ALA A 275 REMARK 465 ARG A 276 REMARK 465 THR A 277 REMARK 465 THR A 278 REMARK 465 GLY A 279 REMARK 465 ASP A 280 REMARK 465 ALA A 281 REMARK 465 PRO A 282 REMARK 465 ALA A 283 REMARK 465 GLU A 284 REMARK 465 ALA A 285 REMARK 465 ARG A 286 REMARK 465 ALA A 287 REMARK 465 SER A 288 REMARK 465 GLY A 289 REMARK 465 THR A 290 REMARK 465 GLY A 291 REMARK 465 VAL A 292 REMARK 465 VAL A 293 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE ARG A 102 O HOH A 402 1.44 REMARK 500 HH11 ARG A 100 O HOH A 401 1.50 REMARK 500 HH21 ARG A 10 O HOH A 403 1.51 REMARK 500 NH1 ARG A 100 O HOH A 401 1.91 REMARK 500 NE ARG A 102 O HOH A 402 2.00 REMARK 500 O HOH A 403 O HOH A 505 2.10 REMARK 500 O HOH A 539 O HOH A 582 2.11 REMARK 500 NH2 ARG A 10 O HOH A 403 2.13 REMARK 500 NH2 ARG A 102 O HOH A 402 2.14 REMARK 500 OE1 GLU A 146 O HOH A 404 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HE ARG A 199 HE ARG A 199 2555 1.31 REMARK 500 O HOH A 566 O HOH A 591 8544 1.90 REMARK 500 O HOH A 584 O HOH A 599 2455 2.08 REMARK 500 O HOH A 585 O HOH A 601 8444 2.13 REMARK 500 O HOH A 485 O HOH A 485 4555 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 42 37.87 -99.95 REMARK 500 VAL A 76 -70.99 -124.90 REMARK 500 PHE A 109 -126.15 59.46 REMARK 500 HIS A 195 59.41 -119.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 304 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 158 ND1 REMARK 620 2 HIS A 158 ND1 0.0 REMARK 620 3 HOH A 451 O 108.1 108.1 REMARK 620 4 HOH A 451 O 100.5 100.5 125.4 REMARK 620 5 HOH A 583 O 122.6 122.6 62.7 62.7 REMARK 620 6 HOH A 583 O 122.6 122.6 62.7 62.7 0.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MQZ A 306 DBREF 6T70 A 2 293 UNP K4MHV9 K4MHV9_9ACTN 2 293 SEQADV 6T70 HIS A -16 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 HIS A -15 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 HIS A -14 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 HIS A -13 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 HIS A -12 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 HIS A -11 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 SER A -10 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 SER A -9 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 GLY A -8 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 LEU A -7 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 VAL A -6 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 PRO A -5 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 ARG A -4 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 GLY A -3 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 SER A -2 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 HIS A -1 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 MET A 0 UNP K4MHV9 EXPRESSION TAG SEQADV 6T70 VAL A 1 UNP K4MHV9 EXPRESSION TAG SEQRES 1 A 310 HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO ARG SEQRES 2 A 310 GLY SER HIS MET VAL ARG ASP GLY ASN GLY THR SER ARG SEQRES 3 A 310 ARG ASP VAL PHE GLU VAL PHE SER ARG ASP GLY THR PRO SEQRES 4 A 310 ILE ARG GLY PHE SER ARG PRO GLY PRO GLY GLU THR VAL SEQRES 5 A 310 VAL LEU VAL HIS GLY VAL ALA MET ASP ARG ARG ILE TRP SEQRES 6 A 310 ALA GLU SER GLY PHE LEU ASP ALA LEU PRO ASP ALA HIS SEQRES 7 A 310 VAL LEU ALA LEU ASP LEU ARG GLY ARG GLY GLU SER GLY SEQRES 8 A 310 ARG VAL GLY THR ALA GLU GLY HIS ALA LEU ARG ARG TYR SEQRES 9 A 310 VAL GLU ASP VAL ARG ALA VAL LEU ASP ARG PHE GLY ARG SEQRES 10 A 310 ALA ARG TYR SER LEU PHE GLY THR PHE PHE GLY GLY ARG SEQRES 11 A 310 ILE ALA LEU GLN VAL ALA ALA VAL ASP THR ARG VAL ALA SEQRES 12 A 310 ARG ALA PHE SER PHE CYS ALA HIS ALA GLU GLN VAL GLU SEQRES 13 A 310 ILE PRO GLU ASP ALA VAL GLU GLU GLU ALA VAL ALA VAL SEQRES 14 A 310 GLU GLY PRO GLY GLY HIS ALA TYR LEU ARG ASP HIS PHE SEQRES 15 A 310 THR GLY ARG GLY ALA PRO PRO TRP MET VAL GLU ALA CYS SEQRES 16 A 310 ALA ARG VAL ASP PRO GLY GLU LEU GLY ALA ALA THR ARG SEQRES 17 A 310 GLY LEU LEU HIS GLY SER ASP ARG ARG THR GLU ARG GLY SEQRES 18 A 310 HIS PRO ASP GLN GLU LEU VAL LEU ILE THR ALA ASP GLY SEQRES 19 A 310 ASP ALA ASP LEU ALA PRO PHE HIS ALA GLY GLU ARG ARG SEQRES 20 A 310 LEU GLY ALA HIS LEU TRP LEU VAL ASP ALA PRO THR ARG SEQRES 21 A 310 ILE LYS ALA ALA GLY ARG LEU ALA GLU VAL GLY ARG ARG SEQRES 22 A 310 VAL ALA GLY VAL LEU ALA GLU GLY GLY HIS GLY THR GLY SEQRES 23 A 310 ASP ALA PRO ALA GLU ALA ARG THR THR GLY ASP ALA PRO SEQRES 24 A 310 ALA GLU ALA ARG ALA SER GLY THR GLY VAL VAL HET CL A 301 1 HET GOL A 302 12 HET SO4 A 303 5 HET ZN A 304 1 HET GOL A 305 12 HET MQZ A 306 122 HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION HETNAM MQZ BOTTROMYCIN A2 DERIVATIVE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CL CL 1- FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 SO4 O4 S 2- FORMUL 5 ZN ZN 2+ FORMUL 7 MQZ C42 H62 N8 O8 S2 FORMUL 8 HOH *201(H2 O) HELIX 1 AA1 ARG A 46 SER A 51 1 6 HELIX 2 AA2 PHE A 53 LEU A 57 5 5 HELIX 3 AA3 ALA A 79 HIS A 82 5 4 HELIX 4 AA4 ALA A 83 GLY A 99 1 17 HELIX 5 AA5 PHE A 109 ASP A 122 1 14 HELIX 6 AA6 PRO A 141 GLY A 154 1 14 HELIX 7 AA7 GLY A 156 ARG A 168 1 13 HELIX 8 AA8 PRO A 171 CYS A 178 1 8 HELIX 9 AA9 ALA A 179 VAL A 181 5 3 HELIX 10 AB1 ASP A 182 LEU A 193 1 12 HELIX 11 AB2 LEU A 221 GLY A 232 1 12 HELIX 12 AB3 THR A 242 ALA A 247 1 6 HELIX 13 AB4 ARG A 249 ALA A 262 1 14 SHEET 1 AA1 8 ASP A 11 PHE A 16 0 SHEET 2 AA1 8 PRO A 22 ARG A 28 -1 O SER A 27 N ASP A 11 SHEET 3 AA1 8 HIS A 61 LEU A 65 -1 O VAL A 62 N ARG A 28 SHEET 4 AA1 8 THR A 34 VAL A 38 1 N VAL A 35 O LEU A 63 SHEET 5 AA1 8 TYR A 103 THR A 108 1 O SER A 104 N VAL A 36 SHEET 6 AA1 8 VAL A 125 PHE A 131 1 O PHE A 131 N GLY A 107 SHEET 7 AA1 8 GLU A 209 ALA A 215 1 O VAL A 211 N SER A 130 SHEET 8 AA1 8 HIS A 234 VAL A 238 1 O TRP A 236 N LEU A 212 LINK ND1 HIS A 158 ZN ZN A 304 1555 1555 2.00 LINK ND1 HIS A 158 ZN ZN A 304 1555 2455 2.00 LINK ZN ZN A 304 O HOH A 451 1555 1555 2.43 LINK ZN ZN A 304 O HOH A 451 1555 2455 2.43 LINK ZN ZN A 304 O HOH A 583 1555 1555 2.11 LINK ZN ZN A 304 O HOH A 583 1555 2455 2.11 SITE 1 AC1 4 GLY A 40 VAL A 41 PHE A 109 PHE A 110 SITE 1 AC2 4 ARG A 100 ALA A 101 ARG A 102 HOH A 427 SITE 1 AC3 9 ARG A 46 ARG A 180 ASP A 182 PRO A 183 SITE 2 AC3 9 GLY A 184 HOH A 411 HOH A 439 HOH A 459 SITE 3 AC3 9 HOH A 497 SITE 1 AC4 3 HIS A 158 HOH A 451 HOH A 583 SITE 1 AC5 3 ARG A 18 ARG A 86 HOH A 538 SITE 1 AC6 15 PHE A 109 PHE A 110 ARG A 113 PRO A 141 SITE 2 AC6 15 GLU A 148 HIS A 164 PHE A 165 ARG A 168 SITE 3 AC6 15 THR A 190 LEU A 193 SER A 197 ILE A 244 SITE 4 AC6 15 HOH A 409 HOH A 499 HOH A 542 CRYST1 66.544 79.430 88.444 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015028 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012590 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011307 0.00000