HEADER HYDROLASE 29-OCT-19 6TAB TITLE BD0314 DSLA WILD-TYPE FORM 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SLT DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BDELLOVIBRIO BACTERIOVORUS HD100; SOURCE 3 ORGANISM_TAXID: 264462; SOURCE 4 GENE: BD0314; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS LYSOZYME PEPTIDOGLYCAN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.L.LOVERING,C.J.HARDING REVDAT 3 01-MAY-24 6TAB 1 REMARK REVDAT 2 07-OCT-20 6TAB 1 JRNL REVDAT 1 15-JUL-20 6TAB 0 JRNL AUTH C.J.HARDING,S.G.HUWILER,H.SOMERS,C.LAMBERT,L.J.RAY,R.TILL, JRNL AUTH 2 G.TAYLOR,P.J.MOYNIHAN,R.E.SOCKETT,A.L.LOVERING JRNL TITL A LYSOZYME WITH ALTERED SUBSTRATE SPECIFICITY FACILITATES JRNL TITL 2 PREY CELL EXIT BY THE PERIPLASMIC PREDATOR BDELLOVIBRIO JRNL TITL 3 BACTERIOVORUS. JRNL REF NAT COMMUN V. 11 4817 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32968056 JRNL DOI 10.1038/S41467-020-18139-8 REMARK 2 REMARK 2 RESOLUTION. 1.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 67048 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.177 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3541 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.2920 - 1.2600 0.96 4797 237 0.3720 0.3940 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.027 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.42000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6TAB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292105130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.31 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71428 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.260 REMARK 200 RESOLUTION RANGE LOW (A) : 64.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.40 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.60 REMARK 200 R MERGE FOR SHELL (I) : 1.80000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ETOQ_MUTANT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULPHATE 0.1M ACETATE PH REMARK 280 4.5 30% PEG 8000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.42900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 41.34600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.33500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 41.34600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.42900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.33500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 ASN A 3 REMARK 465 THR A 4 REMARK 465 PRO A 5 REMARK 465 GLN A 6 REMARK 465 HIS A 7 REMARK 465 LYS A 8 REMARK 465 LEU A 9 REMARK 465 PHE A 10 REMARK 465 PHE A 11 REMARK 465 VAL A 12 REMARK 465 VAL A 13 REMARK 465 ALA A 14 REMARK 465 LEU A 15 REMARK 465 LEU A 16 REMARK 465 LEU A 17 REMARK 465 VAL A 18 REMARK 465 VAL A 19 REMARK 465 GLN A 20 REMARK 465 ILE A 21 REMARK 465 LEU A 22 REMARK 465 ALA A 23 REMARK 465 GLY A 24 REMARK 465 CYS A 25 REMARK 465 LYS A 26 REMARK 465 SER A 27 REMARK 465 SER A 28 REMARK 465 SER A 29 REMARK 465 SER A 30 REMARK 465 THR A 31 REMARK 465 THR A 32 REMARK 465 ALA A 33 REMARK 465 GLY A 34 REMARK 465 SER A 35 REMARK 465 THR A 36 REMARK 465 GLU A 37 REMARK 465 ASN A 38 REMARK 465 SER A 39 REMARK 465 SER A 40 REMARK 465 SER A 41 REMARK 465 SER A 42 REMARK 465 THR A 43 REMARK 465 PRO A 44 REMARK 465 ASP A 45 REMARK 465 PRO A 46 REMARK 465 ASP A 47 REMARK 465 THR A 48 REMARK 465 GLY A 49 REMARK 465 THR A 50 REMARK 465 THR A 51 REMARK 465 THR A 52 REMARK 465 PRO A 53 REMARK 465 ASP A 54 REMARK 465 PRO A 55 REMARK 465 ILE A 56 REMARK 465 GLU A 57 REMARK 465 PRO A 58 REMARK 465 GLU A 59 REMARK 465 VAL A 60 REMARK 465 VAL A 61 REMARK 465 PRO A 62 REMARK 465 PRO A 63 REMARK 465 VAL A 64 REMARK 465 THR A 65 REMARK 465 PRO A 66 REMARK 465 PRO A 67 REMARK 465 SER A 68 REMARK 465 VAL A 69 REMARK 465 ASP A 70 REMARK 465 SER A 71 REMARK 465 ASN A 72 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 543 O HOH A 571 1.19 REMARK 500 O HOH A 572 O HOH A 578 1.39 REMARK 500 O HOH A 516 O HOH A 572 1.89 REMARK 500 O HOH A 494 O HOH A 583 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 S SO4 A 301 S SO4 A 302 4545 0.03 REMARK 500 O3 SO4 A 301 O2 SO4 A 302 4545 0.10 REMARK 500 O4 SO4 A 301 O1 SO4 A 302 4545 0.12 REMARK 500 O1 SO4 A 301 O3 SO4 A 302 4545 0.14 REMARK 500 O2 SO4 A 301 O4 SO4 A 302 4545 0.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 113 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 163 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 206 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG A 206 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 117 82.39 -160.90 REMARK 500 ALA A 215 -156.05 -156.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 645 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A 646 DISTANCE = 6.73 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues SO4 A 301 and SO4 A REMARK 800 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6TA9 RELATED DB: PDB REMARK 900 NATIVE, FORM 1 DBREF 6TAB A 1 254 UNP Q6MQY8 Q6MQY8_BDEBA 1 254 SEQADV 6TAB SER A 73 UNP Q6MQY8 LEU 73 CONFLICT SEQRES 1 A 254 MET LYS ASN THR PRO GLN HIS LYS LEU PHE PHE VAL VAL SEQRES 2 A 254 ALA LEU LEU LEU VAL VAL GLN ILE LEU ALA GLY CYS LYS SEQRES 3 A 254 SER SER SER SER THR THR ALA GLY SER THR GLU ASN SER SEQRES 4 A 254 SER SER SER THR PRO ASP PRO ASP THR GLY THR THR THR SEQRES 5 A 254 PRO ASP PRO ILE GLU PRO GLU VAL VAL PRO PRO VAL THR SEQRES 6 A 254 PRO PRO SER VAL ASP SER ASN SER ARG GLU VAL ILE PRO SEQRES 7 A 254 LEU TRP GLU ASP LYS VAL ALA ASP GLY LYS ALA TRP SER SEQRES 8 A 254 THR HIS VAL TYR SER ALA LEU ASP LYS LEU GLY PRO ASN SEQRES 9 A 254 LEU LEU ASP VAL ILE PRO ALA ASP ARG SER LEU PHE CYS SEQRES 10 A 254 PRO LYS TYR SER SER LEU SER TYR ALA GLN ARG LYS GLN SEQRES 11 A 254 TYR TRP ALA PHE VAL LEU SER SER MET VAL ARG PHE GLU SEQRES 12 A 254 SER ASN PHE LYS THR ALA MET SER TYR THR GLU ASP PHE SEQRES 13 A 254 ASN ASP SER ASN GLY ASN ARG VAL ILE SER ARG GLY LEU SEQRES 14 A 254 LEU GLN ILE SER ILE GLU SER GLY ASN ALA TYR GLY CYS SEQRES 15 A 254 GLY PHE LYS SER THR LYS ASP LEU HIS ASP PRO LEU GLN SEQRES 16 A 254 ASN LEU SER CYS GLY ILE ARG ILE LEU ASP ARG TRP VAL SEQRES 17 A 254 SER ARG ASP GLY ARG ILE ALA GLY LYS VAL ASP GLY ALA SEQRES 18 A 254 TRP LYS GLY GLY ALA ARG TYR TRP SER VAL LEU ARG ALA SEQRES 19 A 254 GLY ASP LYS THR SER TYR LYS SER ILE VAL SER TRP SER SEQRES 20 A 254 GLN ASN LEU SER ILE CYS LYS HET SO4 A 301 5 HET SO4 A 302 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 2(O4 S 2-) FORMUL 4 HOH *246(H2 O) HELIX 1 AA1 PRO A 78 LYS A 83 5 6 HELIX 2 AA2 ASP A 86 GLY A 102 1 17 HELIX 3 AA3 ASN A 104 VAL A 108 5 5 HELIX 4 AA4 ASP A 112 CYS A 117 1 6 HELIX 5 AA5 LYS A 119 LEU A 123 5 5 HELIX 6 AA6 SER A 124 ASN A 145 1 22 HELIX 7 AA7 SER A 173 ALA A 179 1 7 HELIX 8 AA8 SER A 186 HIS A 191 5 6 HELIX 9 AA9 ASP A 192 GLY A 212 1 21 HELIX 10 AB1 GLY A 224 TYR A 228 5 5 HELIX 11 AB2 TRP A 229 ARG A 233 5 5 HELIX 12 AB3 LYS A 237 ASN A 249 1 13 SHEET 1 AA1 2 SER A 151 ASN A 157 0 SHEET 2 AA1 2 ARG A 163 ARG A 167 -1 O VAL A 164 N GLU A 154 SHEET 1 AA2 2 LYS A 217 VAL A 218 0 SHEET 2 AA2 2 ALA A 221 TRP A 222 -1 O ALA A 221 N VAL A 218 SSBOND 1 CYS A 117 CYS A 253 1555 1555 2.14 SSBOND 2 CYS A 182 CYS A 199 1555 1555 2.12 LINK S SO4 A 301 O1 SO4 A 302 1555 4545 1.43 LINK S SO4 A 301 O3 SO4 A 302 1555 4545 1.44 LINK S SO4 A 301 O4 SO4 A 302 1555 4545 1.38 LINK S SO4 A 301 O2 SO4 A 302 1555 4545 1.44 LINK O1 SO4 A 301 S SO4 A 302 1555 4545 1.45 LINK O2 SO4 A 301 S SO4 A 302 1555 4545 1.53 LINK O3 SO4 A 301 S SO4 A 302 1555 4545 1.52 LINK O4 SO4 A 301 S SO4 A 302 1555 4545 1.48 SITE 1 AC1 2 ARG A 74 HOH A 403 SITE 1 AC2 2 ARG A 74 HOH A 403 SITE 1 AC3 2 ARG A 74 HOH A 403 SITE 1 AC4 2 ARG A 74 HOH A 403 SITE 1 AC5 2 ARG A 74 HOH A 403 SITE 1 AC6 2 ARG A 74 HOH A 403 SITE 1 AC7 2 ARG A 74 HOH A 403 SITE 1 AC8 2 ARG A 74 HOH A 403 CRYST1 48.858 64.670 82.692 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020467 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015463 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012093 0.00000