HEADER TOXIN 30-OCT-19 6TAO TITLE THE CYTOTOXIN MAKE FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-HEMOLYTIC ENTEROTOXIN LYTIC COMPONENT L1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: C9J66_02380, EC575_16750, EN12_17975, ERS013140_03541, SOURCE 5 ERS013165_02451, ERS013186_00740, ERS013198_00092, ERS013199_01996, SOURCE 6 ERS013200_01286, ERS013201_03487, ERS013202_01073, ERS013206_01275, SOURCE 7 EYB64_16860; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CYTOTOXIN CHOLERA, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR K.PERSSON,R.NAGAMPALLI,T.HEIDLER,S.N.WAI REVDAT 3 19-JUN-24 6TAO 1 REMARK REVDAT 2 01-DEC-21 6TAO 1 JRNL REVDAT 1 18-NOV-20 6TAO 0 JRNL AUTH A.NADEEM,R.NAGAMPALLI,E.TOH,A.ALAM,S.L.MYINT,T.V.HEIDLER, JRNL AUTH 2 M.DONGRE,N.ZLATKOV,H.PACE,F.BANO,A.SJOSTEDT,M.BALLY, JRNL AUTH 3 B.E.UHLIN,S.N.WAI,K.PERSSON JRNL TITL A TRIPARTITE CYTOLYTIC TOXIN FORMED BY VIBRIO CHOLERAE JRNL TITL 2 PROTEINS WITH FLAGELLUM-FACILITATED SECRETION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 118 2021 JRNL REFN ESSN 1091-6490 JRNL PMID 34799450 JRNL DOI 10.1073/PNAS.2111418118 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.18 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 44086 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.540 REMARK 3 FREE R VALUE TEST SET COUNT : 2000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.1750 - 4.7708 0.99 3046 145 0.1580 0.1742 REMARK 3 2 4.7708 - 3.7872 1.00 3027 144 0.1259 0.2003 REMARK 3 3 3.7872 - 3.3086 1.00 3031 144 0.1547 0.2206 REMARK 3 4 3.3086 - 3.0061 1.00 2987 141 0.1789 0.2832 REMARK 3 5 3.0061 - 2.7907 1.00 3021 145 0.1956 0.2523 REMARK 3 6 2.7907 - 2.6261 1.00 3032 144 0.1925 0.2690 REMARK 3 7 2.6261 - 2.4946 1.00 2985 141 0.1949 0.2561 REMARK 3 8 2.4946 - 2.3860 1.00 2978 142 0.1951 0.2458 REMARK 3 9 2.3860 - 2.2942 1.00 3017 144 0.2041 0.2856 REMARK 3 10 2.2942 - 2.2150 1.00 2996 142 0.2132 0.2586 REMARK 3 11 2.2150 - 2.1458 1.00 3021 143 0.2236 0.2610 REMARK 3 12 2.1458 - 2.0844 1.00 2994 142 0.2438 0.2864 REMARK 3 13 2.0844 - 2.0295 1.00 2978 142 0.2682 0.3346 REMARK 3 14 2.0295 - 1.9800 1.00 2973 141 0.3064 0.3471 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 6:356) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2452 -0.4273 7.9421 REMARK 3 T TENSOR REMARK 3 T11: 0.1801 T22: 0.2204 REMARK 3 T33: 0.2012 T12: -0.0063 REMARK 3 T13: -0.0131 T23: 0.0011 REMARK 3 L TENSOR REMARK 3 L11: 0.5599 L22: 1.4848 REMARK 3 L33: 2.1436 L12: 0.4272 REMARK 3 L13: -0.4847 L23: -1.3366 REMARK 3 S TENSOR REMARK 3 S11: 0.0454 S12: -0.1019 S13: -0.0714 REMARK 3 S21: 0.1856 S22: -0.0488 S23: -0.0766 REMARK 3 S31: -0.1572 S32: 0.0719 S33: 0.0108 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESID 6:356) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0804 16.6150 -14.0155 REMARK 3 T TENSOR REMARK 3 T11: 0.1808 T22: 0.2328 REMARK 3 T33: 0.2284 T12: -0.0421 REMARK 3 T13: 0.0235 T23: 0.0324 REMARK 3 L TENSOR REMARK 3 L11: 0.5863 L22: 3.0121 REMARK 3 L33: 0.7635 L12: -0.6810 REMARK 3 L13: 0.2451 L23: -0.5288 REMARK 3 S TENSOR REMARK 3 S11: -0.0040 S12: -0.0986 S13: -0.0572 REMARK 3 S21: 0.1117 S22: 0.1220 S23: 0.2387 REMARK 3 S31: 0.0069 S32: -0.0774 S33: -0.1067 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TAO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292105116. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87313 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44118 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 49.175 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 1.13400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 MM NICKEL CHLORIDE, 0.1 M TRIS PH REMARK 280 8.5, 20% PEG2000MME, PH 8.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.46800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 ALA A 3 REMARK 465 MET A 4 REMARK 465 ASN A 5 REMARK 465 ASN A 193 REMARK 465 ALA A 194 REMARK 465 GLN A 195 REMARK 465 SER A 196 REMARK 465 GLN A 197 REMARK 465 ARG A 198 REMARK 465 GLY B 2 REMARK 465 ALA B 3 REMARK 465 MET B 4 REMARK 465 ASN B 5 REMARK 465 ALA B 194 REMARK 465 GLN B 195 REMARK 465 SER B 196 REMARK 465 GLN B 197 REMARK 465 ARG B 198 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH11 ARG A 104 O HOH A 501 1.23 REMARK 500 H GLY A 218 O HOH A 511 1.49 REMARK 500 HE22 GLN A 245 O HOH A 508 1.55 REMARK 500 HE1 HIS A 253 NI NI A 402 1.56 REMARK 500 NH1 ARG A 104 O HOH A 501 1.81 REMARK 500 OD1 ASP A 290 O HOH A 502 1.83 REMARK 500 O ARG A 104 O HOH A 501 1.88 REMARK 500 O HOH A 502 O HOH A 527 2.09 REMARK 500 N GLN A 6 O HOH A 503 2.13 REMARK 500 OE1 GLN A 263 O HOH A 504 2.14 REMARK 500 O HOH A 671 O HOH A 685 2.16 REMARK 500 O4 SO4 A 404 O HOH A 505 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 104 OG SER A 235 2546 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 104 NH1 - CZ - NH2 ANGL. DEV. = -7.9 DEGREES REMARK 500 ARG A 104 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 104 NE - CZ - NH2 ANGL. DEV. = 4.2 DEGREES REMARK 500 MET B 180 CB - CG - SD ANGL. DEV. = -18.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 45 -57.88 76.52 REMARK 500 LEU A 70 -75.84 -76.10 REMARK 500 LEU B 70 -124.03 62.37 REMARK 500 ILE B 191 43.82 -80.17 REMARK 500 ALA B 233 33.74 -159.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 45 NE2 REMARK 620 2 SO4 A 403 O3 90.0 REMARK 620 3 HOH A 582 O 163.8 96.0 REMARK 620 4 HOH A 709 O 121.5 140.2 60.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI B 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 666 O REMARK 620 2 HOH B 675 O 129.9 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI B 402 DBREF1 6TAO A 4 356 UNP A0A0F4FI88_VIBCL DBREF2 6TAO A A0A0F4FI88 1 353 DBREF1 6TAO B 4 356 UNP A0A0F4FI88_VIBCL DBREF2 6TAO B A0A0F4FI88 1 353 SEQADV 6TAO GLY A 2 UNP A0A0F4FI8 EXPRESSION TAG SEQADV 6TAO ALA A 3 UNP A0A0F4FI8 EXPRESSION TAG SEQADV 6TAO GLY B 2 UNP A0A0F4FI8 EXPRESSION TAG SEQADV 6TAO ALA B 3 UNP A0A0F4FI8 EXPRESSION TAG SEQRES 1 A 355 GLY ALA MET ASN GLN SER ALA SER GLU GLN LEU GLN THR SEQRES 2 A 355 ASP ILE PRO ALA SER ILE SER ALA MET VAL LEU LEU ASN SEQRES 3 A 355 SER ALA CYS GLN GLY VAL VAL GLU THR TYR ILE ASP GLN SEQRES 4 A 355 GLY ASN ALA GLU HIS TRP TYR ALA GLN VAL GLU GLN ASN SEQRES 5 A 355 LEU ASN ALA VAL GLN LYS LEU VAL ARG GLN TRP ARG LEU SEQRES 6 A 355 SER GLY ASN LEU TYR PHE SER ASN ASP ILE MET ASP SER SEQRES 7 A 355 VAL LEU SER ILE ALA ASN THR PHE LYS ASP SER ASN VAL SEQRES 8 A 355 GLN ILE LEU THR LEU PHE LYS ALA LEU GLU THR ARG PHE SEQRES 9 A 355 ASP THR ALA GLN LEU GLN GLN LEU THR SER LEU ILE LEU SEQRES 10 A 355 THR LEU GLN ASN PRO ILE GLN SER LEU THR SER ASN ILE SEQRES 11 A 355 LYS ARG TYR ASP GLU GLY LEU ASN ALA TRP ALA ARG GLN SEQRES 12 A 355 VAL GLU ASP ALA HIS ASN THR LEU GLN GLN THR ILE ALA SEQRES 13 A 355 GLN ILE GLN GLN GLU GLU VAL SER ILE GLN ALA GLU ILE SEQRES 14 A 355 ILE ALA THR ASN ALA GLN ILE ASP LEU MET LYS GLN GLN SEQRES 15 A 355 ILE ALA ALA PHE LYS THR ALA ILE ALA ASN ALA GLN SER SEQRES 16 A 355 GLN ARG LYS LYS GLY ILE PHE GLU THR ILE PHE GLY VAL SEQRES 17 A 355 VAL LEU ALA PRO PHE THR LEU GLY GLY SER LEU ILE LEU SEQRES 18 A 355 ALA GLY PHE GLY VAL SER SER ILE VAL GLU ALA GLN SER SEQRES 19 A 355 GLU ILE SER SER LEU GLN SER ASP ILE GLN SER SER LEU SEQRES 20 A 355 ASN THR ILE ASN HIS ASP GLN GLN THR LEU SER GLN ASP SEQRES 21 A 355 GLN GLN GLN ILE ALA SER LEU ASN ALA LEU LEU LEU SER SEQRES 22 A 355 VAL ASP GLN VAL ASN ASN ASP CYS ALA ALA ILE SER ARG SEQRES 23 A 355 SER LEU ASP THR LEU GLN THR THR VAL LEU SER LEU TYR SEQRES 24 A 355 ASN GLU THR ASN ASN VAL VAL SER ASN LEU THR LYS ALA SEQRES 25 A 355 GLN ASP SER GLN ALA VAL ILE LEU GLU GLN VAL TRP TYR SEQRES 26 A 355 GLN SER ALA TYR ASN GLU TRP GLN ASP ILE LEU GLU VAL SEQRES 27 A 355 ALA SER THR LEU ASN ASN ALA GLN PRO GLN ILE THR LYS SEQRES 28 A 355 ALA GLN ILE LYS SEQRES 1 B 355 GLY ALA MET ASN GLN SER ALA SER GLU GLN LEU GLN THR SEQRES 2 B 355 ASP ILE PRO ALA SER ILE SER ALA MET VAL LEU LEU ASN SEQRES 3 B 355 SER ALA CYS GLN GLY VAL VAL GLU THR TYR ILE ASP GLN SEQRES 4 B 355 GLY ASN ALA GLU HIS TRP TYR ALA GLN VAL GLU GLN ASN SEQRES 5 B 355 LEU ASN ALA VAL GLN LYS LEU VAL ARG GLN TRP ARG LEU SEQRES 6 B 355 SER GLY ASN LEU TYR PHE SER ASN ASP ILE MET ASP SER SEQRES 7 B 355 VAL LEU SER ILE ALA ASN THR PHE LYS ASP SER ASN VAL SEQRES 8 B 355 GLN ILE LEU THR LEU PHE LYS ALA LEU GLU THR ARG PHE SEQRES 9 B 355 ASP THR ALA GLN LEU GLN GLN LEU THR SER LEU ILE LEU SEQRES 10 B 355 THR LEU GLN ASN PRO ILE GLN SER LEU THR SER ASN ILE SEQRES 11 B 355 LYS ARG TYR ASP GLU GLY LEU ASN ALA TRP ALA ARG GLN SEQRES 12 B 355 VAL GLU ASP ALA HIS ASN THR LEU GLN GLN THR ILE ALA SEQRES 13 B 355 GLN ILE GLN GLN GLU GLU VAL SER ILE GLN ALA GLU ILE SEQRES 14 B 355 ILE ALA THR ASN ALA GLN ILE ASP LEU MET LYS GLN GLN SEQRES 15 B 355 ILE ALA ALA PHE LYS THR ALA ILE ALA ASN ALA GLN SER SEQRES 16 B 355 GLN ARG LYS LYS GLY ILE PHE GLU THR ILE PHE GLY VAL SEQRES 17 B 355 VAL LEU ALA PRO PHE THR LEU GLY GLY SER LEU ILE LEU SEQRES 18 B 355 ALA GLY PHE GLY VAL SER SER ILE VAL GLU ALA GLN SER SEQRES 19 B 355 GLU ILE SER SER LEU GLN SER ASP ILE GLN SER SER LEU SEQRES 20 B 355 ASN THR ILE ASN HIS ASP GLN GLN THR LEU SER GLN ASP SEQRES 21 B 355 GLN GLN GLN ILE ALA SER LEU ASN ALA LEU LEU LEU SER SEQRES 22 B 355 VAL ASP GLN VAL ASN ASN ASP CYS ALA ALA ILE SER ARG SEQRES 23 B 355 SER LEU ASP THR LEU GLN THR THR VAL LEU SER LEU TYR SEQRES 24 B 355 ASN GLU THR ASN ASN VAL VAL SER ASN LEU THR LYS ALA SEQRES 25 B 355 GLN ASP SER GLN ALA VAL ILE LEU GLU GLN VAL TRP TYR SEQRES 26 B 355 GLN SER ALA TYR ASN GLU TRP GLN ASP ILE LEU GLU VAL SEQRES 27 B 355 ALA SER THR LEU ASN ASN ALA GLN PRO GLN ILE THR LYS SEQRES 28 B 355 ALA GLN ILE LYS HET NI A 401 1 HET NI A 402 1 HET SO4 A 403 5 HET SO4 A 404 5 HET NI B 401 1 HET NI B 402 1 HETNAM NI NICKEL (II) ION HETNAM SO4 SULFATE ION FORMUL 3 NI 4(NI 2+) FORMUL 5 SO4 2(O4 S 2-) FORMUL 9 HOH *412(H2 O) HELIX 1 AA1 SER A 7 GLU A 35 1 29 HELIX 2 AA2 TRP A 46 LEU A 66 1 21 HELIX 3 AA3 SER A 73 ARG A 104 1 32 HELIX 4 AA4 ASP A 106 THR A 119 1 14 HELIX 5 AA5 LEU A 120 GLU A 162 1 43 HELIX 6 AA6 GLU A 163 SER A 165 5 3 HELIX 7 AA7 ILE A 166 ILE A 191 1 26 HELIX 8 AA8 ALA A 233 GLN A 255 1 23 HELIX 9 AA9 SER A 259 SER A 267 1 9 HELIX 10 AB1 LEU A 268 LEU A 271 5 4 HELIX 11 AB2 LEU A 272 ALA A 313 1 42 HELIX 12 AB3 ASP A 315 LEU A 321 1 7 HELIX 13 AB4 GLU A 322 ALA A 346 1 25 HELIX 14 AB5 SER B 7 GLU B 35 1 29 HELIX 15 AB6 TRP B 46 SER B 67 1 22 HELIX 16 AB7 SER B 73 ARG B 104 1 32 HELIX 17 AB8 ASP B 106 THR B 119 1 14 HELIX 18 AB9 LEU B 120 GLU B 163 1 44 HELIX 19 AC1 ILE B 166 ILE B 191 1 26 HELIX 20 AC2 ALA B 233 GLN B 255 1 23 HELIX 21 AC3 SER B 259 SER B 267 1 9 HELIX 22 AC4 LEU B 268 ALA B 270 5 3 HELIX 23 AC5 LEU B 271 ALA B 313 1 43 HELIX 24 AC6 ASP B 315 GLU B 322 1 8 HELIX 25 AC7 GLU B 322 ASN B 345 1 24 SHEET 1 AA1 4 TYR A 37 ILE A 38 0 SHEET 2 AA1 4 SER A 219 VAL A 231 -1 O LEU A 222 N TYR A 37 SHEET 3 AA1 4 LYS A 200 PRO A 213 -1 N PHE A 207 O PHE A 225 SHEET 4 AA1 4 GLN A 349 ILE A 355 1 O ILE A 355 N GLY A 208 SHEET 1 AA2 4 TYR B 37 ILE B 38 0 SHEET 2 AA2 4 SER B 219 VAL B 231 -1 O LEU B 222 N TYR B 37 SHEET 3 AA2 4 LYS B 200 PRO B 213 -1 N GLY B 201 O ILE B 230 SHEET 4 AA2 4 GLN B 349 ILE B 355 1 O ILE B 355 N GLY B 208 LINK NE2 HIS A 45 NI NI A 401 1555 1555 2.04 LINK NI NI A 401 O3 SO4 A 403 1555 1555 2.26 LINK NI NI A 401 O HOH A 582 1555 1555 2.07 LINK NI NI A 401 O HOH A 709 1555 1555 2.60 LINK NI NI B 401 O HOH B 666 1555 1555 2.60 LINK NI NI B 401 O HOH B 675 1555 1555 2.71 SITE 1 AC1 4 HIS A 45 SO4 A 403 HOH A 582 HOH A 709 SITE 1 AC2 2 HIS A 253 SO4 A 404 SITE 1 AC3 3 HIS A 45 GLU A 332 NI A 401 SITE 1 AC4 4 HIS A 253 NI A 402 HOH A 505 HOH A 569 SITE 1 AC5 3 HIS B 253 HOH B 666 HOH B 675 SITE 1 AC6 1 HIS B 45 CRYST1 56.929 94.936 63.636 90.00 110.35 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017566 0.000000 0.006514 0.00000 SCALE2 0.000000 0.010533 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016760 0.00000