HEADER VIRUS LIKE PARTICLE 30-OCT-19 6TAR TITLE STRUCTURE OF THE FIVE-FOLD CAPSOMER OF THE DARC1 CAPSID COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIVITY-REGULATED CYTOSKELETON ASSOCIATED PROTEIN 1; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: DARC1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: ARC1, CG12505; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS DARC, GAG, VIRUS, VLP, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR S.ERLENDSSON,D.R.MORADO,J.D.SHEPHERD,J.A.G.BRIGGS REVDAT 4 30-MAR-22 6TAR 1 REMARK REVDAT 3 19-FEB-20 6TAR 1 JRNL REVDAT 2 15-JAN-20 6TAR 1 JRNL REVDAT 1 01-JAN-20 6TAR 0 JRNL AUTH S.ERLENDSSON,D.R.MORADO,H.B.CULLEN,C.FESCHOTTE,J.D.SHEPHERD, JRNL AUTH 2 J.A.G.BRIGGS JRNL TITL STRUCTURES OF VIRUS-LIKE CAPSIDS FORMED BY THE DROSOPHILA JRNL TITL 2 NEURONAL ARC PROTEINS. JRNL REF NAT.NEUROSCI. V. 23 172 2020 JRNL REFN ISSN 1097-6256 JRNL PMID 31907439 JRNL DOI 10.1038/S41593-019-0569-Y REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, SERIALEM, DIGITALMICROGRAPH, REMARK 3 RELION, CTFFIND, PHENIX, COOT, UCSF REMARK 3 CHIMERA, PHENIX, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 6GSE REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : AB INITIO MODEL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.800 REMARK 3 NUMBER OF PARTICLES : 453276 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6TAR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1292104972. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DARC1 CAPSIDS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.50 REMARK 245 SAMPLE SUPPORT DETAILS : 25 MA REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : THE FIVE-FOLD DARC1 CAPSOMER REMARK 245 MAP IS GENERATED BY SYMMETRY EXPANSION, SUB-BOXING AND LOCAL REMARK 245 REFINEMENT. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 4000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 50060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 LEU A 4 REMARK 465 THR A 5 REMARK 465 GLN A 6 REMARK 465 MET A 7 REMARK 465 THR A 8 REMARK 465 ASN A 9 REMARK 465 GLU A 10 REMARK 465 GLN A 11 REMARK 465 LEU A 12 REMARK 465 ARG A 13 REMARK 465 GLU A 14 REMARK 465 LEU A 15 REMARK 465 ILE A 16 REMARK 465 GLU A 17 REMARK 465 ALA A 18 REMARK 465 VAL A 19 REMARK 465 ARG A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 VAL A 24 REMARK 465 GLY A 25 REMARK 465 ALA A 26 REMARK 465 ALA A 27 REMARK 465 GLY A 28 REMARK 465 SER A 29 REMARK 465 ALA A 30 REMARK 465 ALA A 31 REMARK 465 ALA A 32 REMARK 465 ALA A 33 REMARK 465 GLY A 34 REMARK 465 GLY A 35 REMARK 465 ALA A 36 REMARK 465 ASP A 37 REMARK 465 ALA A 38 REMARK 465 SER A 39 REMARK 465 ARG A 40 REMARK 465 GLY A 41 REMARK 465 GLN A 206 REMARK 465 GLU A 207 REMARK 465 ASP A 208 REMARK 465 GLU A 209 REMARK 465 GLU A 210 REMARK 465 GLN A 211 REMARK 465 LEU A 212 REMARK 465 ALA A 213 REMARK 465 THR A 214 REMARK 465 ALA A 215 REMARK 465 LYS A 216 REMARK 465 ASN A 217 REMARK 465 THR A 218 REMARK 465 ARG A 219 REMARK 465 GLY A 220 REMARK 465 SER A 221 REMARK 465 LYS A 222 REMARK 465 ARG A 223 REMARK 465 THR A 224 REMARK 465 THR A 225 REMARK 465 ARG A 226 REMARK 465 CYS A 227 REMARK 465 THR A 228 REMARK 465 TYR A 229 REMARK 465 CYS A 230 REMARK 465 SER A 231 REMARK 465 PHE A 232 REMARK 465 ARG A 233 REMARK 465 GLY A 234 REMARK 465 HIS A 235 REMARK 465 THR A 236 REMARK 465 PHE A 237 REMARK 465 ASP A 238 REMARK 465 ASN A 239 REMARK 465 CYS A 240 REMARK 465 ARG A 241 REMARK 465 LYS A 242 REMARK 465 ARG A 243 REMARK 465 GLN A 244 REMARK 465 LYS A 245 REMARK 465 ASP A 246 REMARK 465 ARG A 247 REMARK 465 GLN A 248 REMARK 465 GLU A 249 REMARK 465 GLU A 250 REMARK 465 GLN A 251 REMARK 465 HIS A 252 REMARK 465 GLU A 253 REMARK 465 GLU A 254 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLN B 3 REMARK 465 LEU B 4 REMARK 465 THR B 5 REMARK 465 GLN B 6 REMARK 465 MET B 7 REMARK 465 THR B 8 REMARK 465 ASN B 9 REMARK 465 GLU B 10 REMARK 465 GLN B 11 REMARK 465 LEU B 12 REMARK 465 ARG B 13 REMARK 465 GLU B 14 REMARK 465 LEU B 15 REMARK 465 ILE B 16 REMARK 465 GLU B 17 REMARK 465 ALA B 18 REMARK 465 VAL B 19 REMARK 465 ARG B 20 REMARK 465 ALA B 21 REMARK 465 ALA B 22 REMARK 465 ALA B 23 REMARK 465 VAL B 24 REMARK 465 GLY B 25 REMARK 465 ALA B 26 REMARK 465 ALA B 27 REMARK 465 GLY B 28 REMARK 465 SER B 29 REMARK 465 ALA B 30 REMARK 465 ALA B 31 REMARK 465 ALA B 32 REMARK 465 ALA B 33 REMARK 465 GLY B 34 REMARK 465 GLY B 35 REMARK 465 ALA B 36 REMARK 465 ASP B 37 REMARK 465 ALA B 38 REMARK 465 SER B 39 REMARK 465 ARG B 40 REMARK 465 GLY B 41 REMARK 465 GLN B 206 REMARK 465 GLU B 207 REMARK 465 ASP B 208 REMARK 465 GLU B 209 REMARK 465 GLU B 210 REMARK 465 GLN B 211 REMARK 465 LEU B 212 REMARK 465 ALA B 213 REMARK 465 THR B 214 REMARK 465 ALA B 215 REMARK 465 LYS B 216 REMARK 465 ASN B 217 REMARK 465 THR B 218 REMARK 465 ARG B 219 REMARK 465 GLY B 220 REMARK 465 SER B 221 REMARK 465 LYS B 222 REMARK 465 ARG B 223 REMARK 465 THR B 224 REMARK 465 THR B 225 REMARK 465 ARG B 226 REMARK 465 CYS B 227 REMARK 465 THR B 228 REMARK 465 TYR B 229 REMARK 465 CYS B 230 REMARK 465 SER B 231 REMARK 465 PHE B 232 REMARK 465 ARG B 233 REMARK 465 GLY B 234 REMARK 465 HIS B 235 REMARK 465 THR B 236 REMARK 465 PHE B 237 REMARK 465 ASP B 238 REMARK 465 ASN B 239 REMARK 465 CYS B 240 REMARK 465 ARG B 241 REMARK 465 LYS B 242 REMARK 465 ARG B 243 REMARK 465 GLN B 244 REMARK 465 LYS B 245 REMARK 465 ASP B 246 REMARK 465 ARG B 247 REMARK 465 GLN B 248 REMARK 465 GLU B 249 REMARK 465 GLU B 250 REMARK 465 GLN B 251 REMARK 465 HIS B 252 REMARK 465 GLU B 253 REMARK 465 GLU B 254 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 GLN C 3 REMARK 465 LEU C 4 REMARK 465 THR C 5 REMARK 465 GLN C 6 REMARK 465 MET C 7 REMARK 465 THR C 8 REMARK 465 ASN C 9 REMARK 465 GLU C 10 REMARK 465 GLN C 11 REMARK 465 LEU C 12 REMARK 465 ARG C 13 REMARK 465 GLU C 14 REMARK 465 LEU C 15 REMARK 465 ILE C 16 REMARK 465 GLU C 17 REMARK 465 ALA C 18 REMARK 465 VAL C 19 REMARK 465 ARG C 20 REMARK 465 ALA C 21 REMARK 465 ALA C 22 REMARK 465 ALA C 23 REMARK 465 VAL C 24 REMARK 465 GLY C 25 REMARK 465 ALA C 26 REMARK 465 ALA C 27 REMARK 465 GLY C 28 REMARK 465 SER C 29 REMARK 465 ALA C 30 REMARK 465 ALA C 31 REMARK 465 ALA C 32 REMARK 465 ALA C 33 REMARK 465 GLY C 34 REMARK 465 GLY C 35 REMARK 465 ALA C 36 REMARK 465 ASP C 37 REMARK 465 ALA C 38 REMARK 465 SER C 39 REMARK 465 ARG C 40 REMARK 465 GLY C 41 REMARK 465 GLN C 206 REMARK 465 GLU C 207 REMARK 465 ASP C 208 REMARK 465 GLU C 209 REMARK 465 GLU C 210 REMARK 465 GLN C 211 REMARK 465 LEU C 212 REMARK 465 ALA C 213 REMARK 465 THR C 214 REMARK 465 ALA C 215 REMARK 465 LYS C 216 REMARK 465 ASN C 217 REMARK 465 THR C 218 REMARK 465 ARG C 219 REMARK 465 GLY C 220 REMARK 465 SER C 221 REMARK 465 LYS C 222 REMARK 465 ARG C 223 REMARK 465 THR C 224 REMARK 465 THR C 225 REMARK 465 ARG C 226 REMARK 465 CYS C 227 REMARK 465 THR C 228 REMARK 465 TYR C 229 REMARK 465 CYS C 230 REMARK 465 SER C 231 REMARK 465 PHE C 232 REMARK 465 ARG C 233 REMARK 465 GLY C 234 REMARK 465 HIS C 235 REMARK 465 THR C 236 REMARK 465 PHE C 237 REMARK 465 ASP C 238 REMARK 465 ASN C 239 REMARK 465 CYS C 240 REMARK 465 ARG C 241 REMARK 465 LYS C 242 REMARK 465 ARG C 243 REMARK 465 GLN C 244 REMARK 465 LYS C 245 REMARK 465 ASP C 246 REMARK 465 ARG C 247 REMARK 465 GLN C 248 REMARK 465 GLU C 249 REMARK 465 GLU C 250 REMARK 465 GLN C 251 REMARK 465 HIS C 252 REMARK 465 GLU C 253 REMARK 465 GLU C 254 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 GLN D 3 REMARK 465 LEU D 4 REMARK 465 THR D 5 REMARK 465 GLN D 6 REMARK 465 MET D 7 REMARK 465 THR D 8 REMARK 465 ASN D 9 REMARK 465 GLU D 10 REMARK 465 GLN D 11 REMARK 465 LEU D 12 REMARK 465 ARG D 13 REMARK 465 GLU D 14 REMARK 465 LEU D 15 REMARK 465 ILE D 16 REMARK 465 GLU D 17 REMARK 465 ALA D 18 REMARK 465 VAL D 19 REMARK 465 ARG D 20 REMARK 465 ALA D 21 REMARK 465 ALA D 22 REMARK 465 ALA D 23 REMARK 465 VAL D 24 REMARK 465 GLY D 25 REMARK 465 ALA D 26 REMARK 465 ALA D 27 REMARK 465 GLY D 28 REMARK 465 SER D 29 REMARK 465 ALA D 30 REMARK 465 ALA D 31 REMARK 465 ALA D 32 REMARK 465 ALA D 33 REMARK 465 GLY D 34 REMARK 465 GLY D 35 REMARK 465 ALA D 36 REMARK 465 ASP D 37 REMARK 465 ALA D 38 REMARK 465 SER D 39 REMARK 465 ARG D 40 REMARK 465 GLY D 41 REMARK 465 GLN D 206 REMARK 465 GLU D 207 REMARK 465 ASP D 208 REMARK 465 GLU D 209 REMARK 465 GLU D 210 REMARK 465 GLN D 211 REMARK 465 LEU D 212 REMARK 465 ALA D 213 REMARK 465 THR D 214 REMARK 465 ALA D 215 REMARK 465 LYS D 216 REMARK 465 ASN D 217 REMARK 465 THR D 218 REMARK 465 ARG D 219 REMARK 465 GLY D 220 REMARK 465 SER D 221 REMARK 465 LYS D 222 REMARK 465 ARG D 223 REMARK 465 THR D 224 REMARK 465 THR D 225 REMARK 465 ARG D 226 REMARK 465 CYS D 227 REMARK 465 THR D 228 REMARK 465 TYR D 229 REMARK 465 CYS D 230 REMARK 465 SER D 231 REMARK 465 PHE D 232 REMARK 465 ARG D 233 REMARK 465 GLY D 234 REMARK 465 HIS D 235 REMARK 465 THR D 236 REMARK 465 PHE D 237 REMARK 465 ASP D 238 REMARK 465 ASN D 239 REMARK 465 CYS D 240 REMARK 465 ARG D 241 REMARK 465 LYS D 242 REMARK 465 ARG D 243 REMARK 465 GLN D 244 REMARK 465 LYS D 245 REMARK 465 ASP D 246 REMARK 465 ARG D 247 REMARK 465 GLN D 248 REMARK 465 GLU D 249 REMARK 465 GLU D 250 REMARK 465 GLN D 251 REMARK 465 HIS D 252 REMARK 465 GLU D 253 REMARK 465 GLU D 254 REMARK 465 MET E 1 REMARK 465 ALA E 2 REMARK 465 GLN E 3 REMARK 465 LEU E 4 REMARK 465 THR E 5 REMARK 465 GLN E 6 REMARK 465 MET E 7 REMARK 465 THR E 8 REMARK 465 ASN E 9 REMARK 465 GLU E 10 REMARK 465 GLN E 11 REMARK 465 LEU E 12 REMARK 465 ARG E 13 REMARK 465 GLU E 14 REMARK 465 LEU E 15 REMARK 465 ILE E 16 REMARK 465 GLU E 17 REMARK 465 ALA E 18 REMARK 465 VAL E 19 REMARK 465 ARG E 20 REMARK 465 ALA E 21 REMARK 465 ALA E 22 REMARK 465 ALA E 23 REMARK 465 VAL E 24 REMARK 465 GLY E 25 REMARK 465 ALA E 26 REMARK 465 ALA E 27 REMARK 465 GLY E 28 REMARK 465 SER E 29 REMARK 465 ALA E 30 REMARK 465 ALA E 31 REMARK 465 ALA E 32 REMARK 465 ALA E 33 REMARK 465 GLY E 34 REMARK 465 GLY E 35 REMARK 465 ALA E 36 REMARK 465 ASP E 37 REMARK 465 ALA E 38 REMARK 465 SER E 39 REMARK 465 ARG E 40 REMARK 465 GLY E 41 REMARK 465 GLN E 206 REMARK 465 GLU E 207 REMARK 465 ASP E 208 REMARK 465 GLU E 209 REMARK 465 GLU E 210 REMARK 465 GLN E 211 REMARK 465 LEU E 212 REMARK 465 ALA E 213 REMARK 465 THR E 214 REMARK 465 ALA E 215 REMARK 465 LYS E 216 REMARK 465 ASN E 217 REMARK 465 THR E 218 REMARK 465 ARG E 219 REMARK 465 GLY E 220 REMARK 465 SER E 221 REMARK 465 LYS E 222 REMARK 465 ARG E 223 REMARK 465 THR E 224 REMARK 465 THR E 225 REMARK 465 ARG E 226 REMARK 465 CYS E 227 REMARK 465 THR E 228 REMARK 465 TYR E 229 REMARK 465 CYS E 230 REMARK 465 SER E 231 REMARK 465 PHE E 232 REMARK 465 ARG E 233 REMARK 465 GLY E 234 REMARK 465 HIS E 235 REMARK 465 THR E 236 REMARK 465 PHE E 237 REMARK 465 ASP E 238 REMARK 465 ASN E 239 REMARK 465 CYS E 240 REMARK 465 ARG E 241 REMARK 465 LYS E 242 REMARK 465 ARG E 243 REMARK 465 GLN E 244 REMARK 465 LYS E 245 REMARK 465 ASP E 246 REMARK 465 ARG E 247 REMARK 465 GLN E 248 REMARK 465 GLU E 249 REMARK 465 GLU E 250 REMARK 465 GLN E 251 REMARK 465 HIS E 252 REMARK 465 GLU E 253 REMARK 465 GLU E 254 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 49 33.08 -97.51 REMARK 500 LYS A 123 143.74 -39.27 REMARK 500 LEU A 154 53.71 -94.16 REMARK 500 THR B 49 33.03 -97.43 REMARK 500 LYS B 123 143.74 -39.47 REMARK 500 LEU B 154 53.81 -94.27 REMARK 500 THR C 49 33.06 -97.45 REMARK 500 LYS C 123 143.71 -39.50 REMARK 500 LEU C 154 53.68 -94.26 REMARK 500 THR D 49 33.00 -97.37 REMARK 500 LYS D 123 143.70 -39.44 REMARK 500 LEU D 154 53.67 -94.20 REMARK 500 THR E 49 33.01 -97.37 REMARK 500 LYS E 123 143.76 -39.41 REMARK 500 LEU E 154 53.66 -94.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-10425 RELATED DB: EMDB REMARK 900 STRUCTURE OF THE FIVE-FOLD CAPSOMER OF THE DARC1 CAPSID DBREF 6TAR A 1 254 UNP Q7K1U0 ARC1_DROME 1 254 DBREF 6TAR B 1 254 UNP Q7K1U0 ARC1_DROME 1 254 DBREF 6TAR C 1 254 UNP Q7K1U0 ARC1_DROME 1 254 DBREF 6TAR D 1 254 UNP Q7K1U0 ARC1_DROME 1 254 DBREF 6TAR E 1 254 UNP Q7K1U0 ARC1_DROME 1 254 SEQRES 1 A 254 MET ALA GLN LEU THR GLN MET THR ASN GLU GLN LEU ARG SEQRES 2 A 254 GLU LEU ILE GLU ALA VAL ARG ALA ALA ALA VAL GLY ALA SEQRES 3 A 254 ALA GLY SER ALA ALA ALA ALA GLY GLY ALA ASP ALA SER SEQRES 4 A 254 ARG GLY LYS GLY ASN PHE SER ALA CYS THR HIS SER PHE SEQRES 5 A 254 GLY GLY THR ARG ASP HIS ASP VAL VAL GLU GLU PHE ILE SEQRES 6 A 254 GLY ASN ILE GLU THR TYR LYS ASP VAL GLU GLY ILE SER SEQRES 7 A 254 ASP GLU ASN ALA LEU LYS GLY ILE SER LEU LEU PHE TYR SEQRES 8 A 254 GLY MET ALA SER THR TRP TRP GLN GLY VAL ARG LYS GLU SEQRES 9 A 254 ALA THR THR TRP LYS GLU ALA ILE ALA LEU ILE ARG GLU SEQRES 10 A 254 HIS PHE SER PRO THR LYS PRO ALA TYR GLN ILE TYR MET SEQRES 11 A 254 GLU PHE PHE GLN ASN LYS GLN ASP ASP HIS ASP PRO ILE SEQRES 12 A 254 ASP THR PHE VAL ILE GLN LYS ARG ALA LEU LEU ALA GLN SEQRES 13 A 254 LEU PRO SER GLY ARG HIS ASP GLU GLU THR GLU LEU ASP SEQRES 14 A 254 LEU LEU PHE GLY LEU LEU ASN ILE LYS TYR ARG LYS HIS SEQRES 15 A 254 ILE SER ARG HIS SER VAL HIS THR PHE LYS ASP LEU LEU SEQRES 16 A 254 GLU GLN GLY ARG ILE ILE GLU HIS ASN ASN GLN GLU ASP SEQRES 17 A 254 GLU GLU GLN LEU ALA THR ALA LYS ASN THR ARG GLY SER SEQRES 18 A 254 LYS ARG THR THR ARG CYS THR TYR CYS SER PHE ARG GLY SEQRES 19 A 254 HIS THR PHE ASP ASN CYS ARG LYS ARG GLN LYS ASP ARG SEQRES 20 A 254 GLN GLU GLU GLN HIS GLU GLU SEQRES 1 B 254 MET ALA GLN LEU THR GLN MET THR ASN GLU GLN LEU ARG SEQRES 2 B 254 GLU LEU ILE GLU ALA VAL ARG ALA ALA ALA VAL GLY ALA SEQRES 3 B 254 ALA GLY SER ALA ALA ALA ALA GLY GLY ALA ASP ALA SER SEQRES 4 B 254 ARG GLY LYS GLY ASN PHE SER ALA CYS THR HIS SER PHE SEQRES 5 B 254 GLY GLY THR ARG ASP HIS ASP VAL VAL GLU GLU PHE ILE SEQRES 6 B 254 GLY ASN ILE GLU THR TYR LYS ASP VAL GLU GLY ILE SER SEQRES 7 B 254 ASP GLU ASN ALA LEU LYS GLY ILE SER LEU LEU PHE TYR SEQRES 8 B 254 GLY MET ALA SER THR TRP TRP GLN GLY VAL ARG LYS GLU SEQRES 9 B 254 ALA THR THR TRP LYS GLU ALA ILE ALA LEU ILE ARG GLU SEQRES 10 B 254 HIS PHE SER PRO THR LYS PRO ALA TYR GLN ILE TYR MET SEQRES 11 B 254 GLU PHE PHE GLN ASN LYS GLN ASP ASP HIS ASP PRO ILE SEQRES 12 B 254 ASP THR PHE VAL ILE GLN LYS ARG ALA LEU LEU ALA GLN SEQRES 13 B 254 LEU PRO SER GLY ARG HIS ASP GLU GLU THR GLU LEU ASP SEQRES 14 B 254 LEU LEU PHE GLY LEU LEU ASN ILE LYS TYR ARG LYS HIS SEQRES 15 B 254 ILE SER ARG HIS SER VAL HIS THR PHE LYS ASP LEU LEU SEQRES 16 B 254 GLU GLN GLY ARG ILE ILE GLU HIS ASN ASN GLN GLU ASP SEQRES 17 B 254 GLU GLU GLN LEU ALA THR ALA LYS ASN THR ARG GLY SER SEQRES 18 B 254 LYS ARG THR THR ARG CYS THR TYR CYS SER PHE ARG GLY SEQRES 19 B 254 HIS THR PHE ASP ASN CYS ARG LYS ARG GLN LYS ASP ARG SEQRES 20 B 254 GLN GLU GLU GLN HIS GLU GLU SEQRES 1 C 254 MET ALA GLN LEU THR GLN MET THR ASN GLU GLN LEU ARG SEQRES 2 C 254 GLU LEU ILE GLU ALA VAL ARG ALA ALA ALA VAL GLY ALA SEQRES 3 C 254 ALA GLY SER ALA ALA ALA ALA GLY GLY ALA ASP ALA SER SEQRES 4 C 254 ARG GLY LYS GLY ASN PHE SER ALA CYS THR HIS SER PHE SEQRES 5 C 254 GLY GLY THR ARG ASP HIS ASP VAL VAL GLU GLU PHE ILE SEQRES 6 C 254 GLY ASN ILE GLU THR TYR LYS ASP VAL GLU GLY ILE SER SEQRES 7 C 254 ASP GLU ASN ALA LEU LYS GLY ILE SER LEU LEU PHE TYR SEQRES 8 C 254 GLY MET ALA SER THR TRP TRP GLN GLY VAL ARG LYS GLU SEQRES 9 C 254 ALA THR THR TRP LYS GLU ALA ILE ALA LEU ILE ARG GLU SEQRES 10 C 254 HIS PHE SER PRO THR LYS PRO ALA TYR GLN ILE TYR MET SEQRES 11 C 254 GLU PHE PHE GLN ASN LYS GLN ASP ASP HIS ASP PRO ILE SEQRES 12 C 254 ASP THR PHE VAL ILE GLN LYS ARG ALA LEU LEU ALA GLN SEQRES 13 C 254 LEU PRO SER GLY ARG HIS ASP GLU GLU THR GLU LEU ASP SEQRES 14 C 254 LEU LEU PHE GLY LEU LEU ASN ILE LYS TYR ARG LYS HIS SEQRES 15 C 254 ILE SER ARG HIS SER VAL HIS THR PHE LYS ASP LEU LEU SEQRES 16 C 254 GLU GLN GLY ARG ILE ILE GLU HIS ASN ASN GLN GLU ASP SEQRES 17 C 254 GLU GLU GLN LEU ALA THR ALA LYS ASN THR ARG GLY SER SEQRES 18 C 254 LYS ARG THR THR ARG CYS THR TYR CYS SER PHE ARG GLY SEQRES 19 C 254 HIS THR PHE ASP ASN CYS ARG LYS ARG GLN LYS ASP ARG SEQRES 20 C 254 GLN GLU GLU GLN HIS GLU GLU SEQRES 1 D 254 MET ALA GLN LEU THR GLN MET THR ASN GLU GLN LEU ARG SEQRES 2 D 254 GLU LEU ILE GLU ALA VAL ARG ALA ALA ALA VAL GLY ALA SEQRES 3 D 254 ALA GLY SER ALA ALA ALA ALA GLY GLY ALA ASP ALA SER SEQRES 4 D 254 ARG GLY LYS GLY ASN PHE SER ALA CYS THR HIS SER PHE SEQRES 5 D 254 GLY GLY THR ARG ASP HIS ASP VAL VAL GLU GLU PHE ILE SEQRES 6 D 254 GLY ASN ILE GLU THR TYR LYS ASP VAL GLU GLY ILE SER SEQRES 7 D 254 ASP GLU ASN ALA LEU LYS GLY ILE SER LEU LEU PHE TYR SEQRES 8 D 254 GLY MET ALA SER THR TRP TRP GLN GLY VAL ARG LYS GLU SEQRES 9 D 254 ALA THR THR TRP LYS GLU ALA ILE ALA LEU ILE ARG GLU SEQRES 10 D 254 HIS PHE SER PRO THR LYS PRO ALA TYR GLN ILE TYR MET SEQRES 11 D 254 GLU PHE PHE GLN ASN LYS GLN ASP ASP HIS ASP PRO ILE SEQRES 12 D 254 ASP THR PHE VAL ILE GLN LYS ARG ALA LEU LEU ALA GLN SEQRES 13 D 254 LEU PRO SER GLY ARG HIS ASP GLU GLU THR GLU LEU ASP SEQRES 14 D 254 LEU LEU PHE GLY LEU LEU ASN ILE LYS TYR ARG LYS HIS SEQRES 15 D 254 ILE SER ARG HIS SER VAL HIS THR PHE LYS ASP LEU LEU SEQRES 16 D 254 GLU GLN GLY ARG ILE ILE GLU HIS ASN ASN GLN GLU ASP SEQRES 17 D 254 GLU GLU GLN LEU ALA THR ALA LYS ASN THR ARG GLY SER SEQRES 18 D 254 LYS ARG THR THR ARG CYS THR TYR CYS SER PHE ARG GLY SEQRES 19 D 254 HIS THR PHE ASP ASN CYS ARG LYS ARG GLN LYS ASP ARG SEQRES 20 D 254 GLN GLU GLU GLN HIS GLU GLU SEQRES 1 E 254 MET ALA GLN LEU THR GLN MET THR ASN GLU GLN LEU ARG SEQRES 2 E 254 GLU LEU ILE GLU ALA VAL ARG ALA ALA ALA VAL GLY ALA SEQRES 3 E 254 ALA GLY SER ALA ALA ALA ALA GLY GLY ALA ASP ALA SER SEQRES 4 E 254 ARG GLY LYS GLY ASN PHE SER ALA CYS THR HIS SER PHE SEQRES 5 E 254 GLY GLY THR ARG ASP HIS ASP VAL VAL GLU GLU PHE ILE SEQRES 6 E 254 GLY ASN ILE GLU THR TYR LYS ASP VAL GLU GLY ILE SER SEQRES 7 E 254 ASP GLU ASN ALA LEU LYS GLY ILE SER LEU LEU PHE TYR SEQRES 8 E 254 GLY MET ALA SER THR TRP TRP GLN GLY VAL ARG LYS GLU SEQRES 9 E 254 ALA THR THR TRP LYS GLU ALA ILE ALA LEU ILE ARG GLU SEQRES 10 E 254 HIS PHE SER PRO THR LYS PRO ALA TYR GLN ILE TYR MET SEQRES 11 E 254 GLU PHE PHE GLN ASN LYS GLN ASP ASP HIS ASP PRO ILE SEQRES 12 E 254 ASP THR PHE VAL ILE GLN LYS ARG ALA LEU LEU ALA GLN SEQRES 13 E 254 LEU PRO SER GLY ARG HIS ASP GLU GLU THR GLU LEU ASP SEQRES 14 E 254 LEU LEU PHE GLY LEU LEU ASN ILE LYS TYR ARG LYS HIS SEQRES 15 E 254 ILE SER ARG HIS SER VAL HIS THR PHE LYS ASP LEU LEU SEQRES 16 E 254 GLU GLN GLY ARG ILE ILE GLU HIS ASN ASN GLN GLU ASP SEQRES 17 E 254 GLU GLU GLN LEU ALA THR ALA LYS ASN THR ARG GLY SER SEQRES 18 E 254 LYS ARG THR THR ARG CYS THR TYR CYS SER PHE ARG GLY SEQRES 19 E 254 HIS THR PHE ASP ASN CYS ARG LYS ARG GLN LYS ASP ARG SEQRES 20 E 254 GLN GLU GLU GLN HIS GLU GLU HELIX 1 AA1 ASP A 57 GLY A 76 1 20 HELIX 2 AA2 GLU A 80 GLY A 85 1 6 HELIX 3 AA3 ILE A 86 LEU A 89 5 4 HELIX 4 AA4 GLY A 92 ARG A 102 1 11 HELIX 5 AA5 LYS A 103 ALA A 105 5 3 HELIX 6 AA6 TRP A 108 PHE A 119 1 12 HELIX 7 AA7 PRO A 124 ASN A 135 1 12 HELIX 8 AA8 PRO A 142 LEU A 154 1 13 HELIX 9 AA9 ASP A 163 PHE A 172 1 10 HELIX 10 AB1 ASN A 176 LYS A 181 1 6 HELIX 11 AB2 THR A 190 ASN A 205 1 16 HELIX 12 AB3 ASP B 57 GLY B 76 1 20 HELIX 13 AB4 GLU B 80 GLY B 85 1 6 HELIX 14 AB5 ILE B 86 LEU B 89 5 4 HELIX 15 AB6 GLY B 92 ARG B 102 1 11 HELIX 16 AB7 LYS B 103 ALA B 105 5 3 HELIX 17 AB8 TRP B 108 PHE B 119 1 12 HELIX 18 AB9 PRO B 124 ASN B 135 1 12 HELIX 19 AC1 PRO B 142 LEU B 154 1 13 HELIX 20 AC2 ASP B 163 PHE B 172 1 10 HELIX 21 AC3 ASN B 176 LYS B 181 1 6 HELIX 22 AC4 THR B 190 ASN B 205 1 16 HELIX 23 AC5 ASP C 57 GLY C 76 1 20 HELIX 24 AC6 GLU C 80 GLY C 85 1 6 HELIX 25 AC7 ILE C 86 LEU C 89 5 4 HELIX 26 AC8 GLY C 92 ARG C 102 1 11 HELIX 27 AC9 LYS C 103 ALA C 105 5 3 HELIX 28 AD1 TRP C 108 PHE C 119 1 12 HELIX 29 AD2 PRO C 124 ASN C 135 1 12 HELIX 30 AD3 PRO C 142 LEU C 154 1 13 HELIX 31 AD4 ASP C 163 PHE C 172 1 10 HELIX 32 AD5 ASN C 176 LYS C 181 1 6 HELIX 33 AD6 THR C 190 ASN C 205 1 16 HELIX 34 AD7 ASP D 57 GLY D 76 1 20 HELIX 35 AD8 GLU D 80 GLY D 85 1 6 HELIX 36 AD9 ILE D 86 LEU D 89 5 4 HELIX 37 AE1 GLY D 92 ARG D 102 1 11 HELIX 38 AE2 LYS D 103 ALA D 105 5 3 HELIX 39 AE3 TRP D 108 PHE D 119 1 12 HELIX 40 AE4 PRO D 124 ASN D 135 1 12 HELIX 41 AE5 PRO D 142 LEU D 154 1 13 HELIX 42 AE6 ASP D 163 PHE D 172 1 10 HELIX 43 AE7 ASN D 176 LYS D 181 1 6 HELIX 44 AE8 THR D 190 ASN D 205 1 16 HELIX 45 AE9 ASP E 57 GLY E 76 1 20 HELIX 46 AF1 GLU E 80 GLY E 85 1 6 HELIX 47 AF2 ILE E 86 LEU E 89 5 4 HELIX 48 AF3 GLY E 92 ARG E 102 1 11 HELIX 49 AF4 LYS E 103 ALA E 105 5 3 HELIX 50 AF5 TRP E 108 PHE E 119 1 12 HELIX 51 AF6 PRO E 124 ASN E 135 1 12 HELIX 52 AF7 PRO E 142 LEU E 154 1 13 HELIX 53 AF8 ASP E 163 PHE E 172 1 10 HELIX 54 AF9 ASN E 176 LYS E 181 1 6 HELIX 55 AG1 THR E 190 ASN E 205 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000