HEADER IMMUNE SYSTEM 06-NOV-19 6TCQ TITLE CRYSTAL STRUCTURE OF THE OMALIZUMAB FAB SER81ARG AND GLN83ARG LIGHT TITLE 2 CHAIN MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: OMALIZUMAB FAB SER81ARG AND GLN83ARG LIGHT CHAIN MUTANT; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: OMALIZUMAB FAB HEAVY CHAIN; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: OMALIZUMAB FAB SER81ARG AND GLN83ARG LIGHT CHAIN MUTANT; COMPND 8 CHAIN: L; COMPND 9 ENGINEERED: YES; COMPND 10 OTHER_DETAILS: OMALIZUMAB FAB SER81ARG AND GLN83ARG LIGHT CHAIN COMPND 11 MUTANT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM_CELL_LINE: HEK KEYWDS FAB, ANTIBODY, IMMUNOGLOBULIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.N.MITROPOULOU,T.CESKA,A.J.BEAVIL,A.J.HENRY,J.M.MCDONNELL, AUTHOR 2 B.J.SUTTON,A.M.DAVIES REVDAT 3 23-OCT-24 6TCQ 1 REMARK REVDAT 2 24-JAN-24 6TCQ 1 REMARK REVDAT 1 18-MAR-20 6TCQ 0 JRNL AUTH A.N.MITROPOULOU,T.CESKA,J.T.HEADS,A.J.BEAVIL,A.J.HENRY, JRNL AUTH 2 J.M.MCDONNELL,B.J.SUTTON,A.M.DAVIES JRNL TITL ENGINEERING THE FAB FRAGMENT OF THE ANTI-IGE OMALIZUMAB TO JRNL TITL 2 PREVENT FAB CRYSTALLIZATION AND PERMIT IGE-FC COMPLEX JRNL TITL 3 CRYSTALLIZATION. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 76 116 2020 JRNL REFN ESSN 2053-230X JRNL PMID 32133997 JRNL DOI 10.1107/S2053230X20001466 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 28385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1409 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0770 - 4.4114 1.00 2876 148 0.1591 0.1847 REMARK 3 2 4.4114 - 3.5036 1.00 2770 148 0.1444 0.1794 REMARK 3 3 3.5036 - 3.0614 1.00 2713 144 0.1730 0.2096 REMARK 3 4 3.0614 - 2.7817 1.00 2678 138 0.1774 0.2405 REMARK 3 5 2.7817 - 2.5825 1.00 2691 135 0.1815 0.2243 REMARK 3 6 2.5825 - 2.4303 1.00 2678 144 0.1861 0.2627 REMARK 3 7 2.4303 - 2.3087 1.00 2656 137 0.1870 0.2690 REMARK 3 8 2.3087 - 2.2082 1.00 2675 143 0.1889 0.2738 REMARK 3 9 2.2082 - 2.1232 1.00 2664 135 0.2131 0.2566 REMARK 3 10 2.1232 - 2.0500 0.97 2575 137 0.2270 0.3015 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3370 REMARK 3 ANGLE : 0.954 4608 REMARK 3 CHIRALITY : 0.056 514 REMARK 3 PLANARITY : 0.006 592 REMARK 3 DIHEDRAL : 12.394 2000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7141 1.9488 -9.9596 REMARK 3 T TENSOR REMARK 3 T11: 0.2458 T22: 0.1622 REMARK 3 T33: 0.1513 T12: 0.0145 REMARK 3 T13: 0.0268 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.5351 L22: 0.3069 REMARK 3 L33: 0.3227 L12: 0.0646 REMARK 3 L13: -0.3025 L23: 0.2619 REMARK 3 S TENSOR REMARK 3 S11: 0.1651 S12: 0.0579 S13: 0.1056 REMARK 3 S21: -0.0258 S22: -0.0144 S23: -0.1788 REMARK 3 S31: -0.2313 S32: 0.1688 S33: 0.1540 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 18 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.1985 -10.7765 -9.7671 REMARK 3 T TENSOR REMARK 3 T11: 0.1916 T22: 0.3329 REMARK 3 T33: 0.2759 T12: 0.0280 REMARK 3 T13: 0.0187 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 0.1166 L22: 0.2330 REMARK 3 L33: 0.2234 L12: 0.2002 REMARK 3 L13: -0.0322 L23: -0.0993 REMARK 3 S TENSOR REMARK 3 S11: 0.2326 S12: 0.4131 S13: -0.3788 REMARK 3 S21: -0.1513 S22: -0.3463 S23: -0.3995 REMARK 3 S31: -0.1931 S32: 0.1200 S33: -0.0043 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 34 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4105 -6.3397 -7.5826 REMARK 3 T TENSOR REMARK 3 T11: 0.1655 T22: 0.1235 REMARK 3 T33: 0.1152 T12: 0.0256 REMARK 3 T13: 0.0067 T23: -0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.3181 L22: 0.1587 REMARK 3 L33: 0.3354 L12: 0.2314 REMARK 3 L13: -0.3916 L23: -0.2689 REMARK 3 S TENSOR REMARK 3 S11: 0.2975 S12: 0.0376 S13: 0.0299 REMARK 3 S21: -0.3020 S22: -0.1147 S23: 0.1212 REMARK 3 S31: -0.2639 S32: -0.0363 S33: 0.0214 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 53 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5225 -11.4746 -17.2182 REMARK 3 T TENSOR REMARK 3 T11: 0.3602 T22: 0.2309 REMARK 3 T33: 0.2065 T12: 0.0682 REMARK 3 T13: -0.1020 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 0.2178 L22: 0.2462 REMARK 3 L33: 0.3376 L12: 0.1999 REMARK 3 L13: 0.1269 L23: -0.0476 REMARK 3 S TENSOR REMARK 3 S11: 0.1072 S12: 0.3651 S13: -0.4054 REMARK 3 S21: -0.7171 S22: 0.0965 S23: 0.3656 REMARK 3 S31: 0.6039 S32: -0.3581 S33: 0.0036 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 68 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1916 -3.5346 -16.2359 REMARK 3 T TENSOR REMARK 3 T11: 0.1806 T22: 0.2020 REMARK 3 T33: 0.1502 T12: 0.0089 REMARK 3 T13: 0.0058 T23: 0.0168 REMARK 3 L TENSOR REMARK 3 L11: 0.1024 L22: 0.6465 REMARK 3 L33: 0.9535 L12: 0.1958 REMARK 3 L13: 0.3235 L23: 0.0659 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: -0.0835 S13: -0.1839 REMARK 3 S21: -0.0861 S22: -0.0195 S23: 0.1585 REMARK 3 S31: -0.1601 S32: 0.0959 S33: 0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 92 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3642 -14.2933 -4.4395 REMARK 3 T TENSOR REMARK 3 T11: 0.0915 T22: 0.1075 REMARK 3 T33: 0.1408 T12: 0.0193 REMARK 3 T13: -0.0117 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 0.5754 L22: 0.3177 REMARK 3 L33: 0.5697 L12: 0.0124 REMARK 3 L13: -0.0923 L23: -0.0200 REMARK 3 S TENSOR REMARK 3 S11: 0.0987 S12: 0.0936 S13: -0.2516 REMARK 3 S21: -0.0334 S22: -0.1129 S23: 0.2818 REMARK 3 S31: 0.0054 S32: -0.0168 S33: -0.0104 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 112 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6207 11.3266 -7.3401 REMARK 3 T TENSOR REMARK 3 T11: 0.2333 T22: 0.1477 REMARK 3 T33: 0.1933 T12: -0.0030 REMARK 3 T13: -0.0113 T23: 0.0320 REMARK 3 L TENSOR REMARK 3 L11: 0.1949 L22: 0.2533 REMARK 3 L33: 0.0817 L12: 0.2602 REMARK 3 L13: -0.0226 L23: 0.1629 REMARK 3 S TENSOR REMARK 3 S11: -0.0170 S12: 0.0987 S13: 0.0402 REMARK 3 S21: -0.1641 S22: 0.0110 S23: 0.0412 REMARK 3 S31: -0.1409 S32: 0.0107 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 128 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2071 21.3347 12.2845 REMARK 3 T TENSOR REMARK 3 T11: 0.2156 T22: 0.3171 REMARK 3 T33: 0.1873 T12: 0.0029 REMARK 3 T13: -0.0689 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.0446 L22: 0.4169 REMARK 3 L33: 0.0807 L12: -0.0538 REMARK 3 L13: -0.0590 L23: 0.1748 REMARK 3 S TENSOR REMARK 3 S11: -0.2388 S12: -0.3944 S13: 0.1022 REMARK 3 S21: 0.0013 S22: 0.0993 S23: -0.0925 REMARK 3 S31: -0.6378 S32: -0.0161 S33: 0.0325 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 154 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8016 14.2615 10.0140 REMARK 3 T TENSOR REMARK 3 T11: 0.1680 T22: 0.2349 REMARK 3 T33: 0.1559 T12: 0.0478 REMARK 3 T13: 0.0227 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 0.4306 L22: 0.8082 REMARK 3 L33: 0.6754 L12: 0.2613 REMARK 3 L13: -0.5132 L23: 0.0267 REMARK 3 S TENSOR REMARK 3 S11: -0.1863 S12: -0.1963 S13: -0.0899 REMARK 3 S21: -0.0634 S22: 0.0017 S23: -0.0543 REMARK 3 S31: 0.0737 S32: 0.2418 S33: -0.1362 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 198 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.8204 17.5071 8.3936 REMARK 3 T TENSOR REMARK 3 T11: 0.1041 T22: 0.4006 REMARK 3 T33: 0.2283 T12: 0.0401 REMARK 3 T13: -0.0004 T23: 0.0557 REMARK 3 L TENSOR REMARK 3 L11: 0.2279 L22: 0.8297 REMARK 3 L33: 1.0718 L12: 0.3221 REMARK 3 L13: 0.1725 L23: 0.3268 REMARK 3 S TENSOR REMARK 3 S11: -0.2541 S12: -0.4595 S13: -0.0897 REMARK 3 S21: -0.3856 S22: -0.0303 S23: -0.3197 REMARK 3 S31: -0.3967 S32: 0.2650 S33: -0.0056 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.6366 -10.7952 10.6719 REMARK 3 T TENSOR REMARK 3 T11: 0.1580 T22: 0.1588 REMARK 3 T33: 0.1950 T12: 0.0087 REMARK 3 T13: 0.0504 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.8833 L22: 0.2738 REMARK 3 L33: 0.2899 L12: -0.2960 REMARK 3 L13: -0.3970 L23: 0.1899 REMARK 3 S TENSOR REMARK 3 S11: -0.0109 S12: -0.0747 S13: -0.1211 REMARK 3 S21: 0.1180 S22: 0.0054 S23: 0.2978 REMARK 3 S31: -0.1631 S32: -0.2066 S33: 0.0504 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 26 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1023 -16.0721 2.2354 REMARK 3 T TENSOR REMARK 3 T11: 0.0813 T22: 0.0988 REMARK 3 T33: 0.1226 T12: -0.0074 REMARK 3 T13: -0.0002 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.1932 L22: 0.1854 REMARK 3 L33: 0.4513 L12: -0.1131 REMARK 3 L13: -0.6006 L23: 0.0103 REMARK 3 S TENSOR REMARK 3 S11: 0.0210 S12: 0.1564 S13: -0.1184 REMARK 3 S21: 0.0151 S22: 0.0290 S23: 0.0060 REMARK 3 S31: -0.0031 S32: 0.0951 S33: 0.0611 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 53 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9665 -19.6630 9.4996 REMARK 3 T TENSOR REMARK 3 T11: 0.0889 T22: 0.1090 REMARK 3 T33: 0.1588 T12: -0.0029 REMARK 3 T13: -0.0142 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.2410 L22: -0.0060 REMARK 3 L33: 0.7034 L12: -0.1036 REMARK 3 L13: -0.0785 L23: 0.1273 REMARK 3 S TENSOR REMARK 3 S11: 0.0935 S12: -0.0784 S13: -0.1486 REMARK 3 S21: 0.1956 S22: 0.0438 S23: -0.0303 REMARK 3 S31: 0.1837 S32: -0.0221 S33: 0.0588 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 80 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3675 -11.1512 5.5449 REMARK 3 T TENSOR REMARK 3 T11: 0.0849 T22: 0.1227 REMARK 3 T33: 0.1613 T12: 0.0110 REMARK 3 T13: 0.0296 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.2809 L22: 0.7675 REMARK 3 L33: 0.7563 L12: 0.0613 REMARK 3 L13: 0.2065 L23: -0.2303 REMARK 3 S TENSOR REMARK 3 S11: 0.0543 S12: 0.0270 S13: -0.1332 REMARK 3 S21: 0.0252 S22: 0.1124 S23: 0.0306 REMARK 3 S31: -0.0583 S32: 0.0444 S33: 0.0573 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 106 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6608 1.7736 22.0660 REMARK 3 T TENSOR REMARK 3 T11: 0.2085 T22: 0.1919 REMARK 3 T33: 0.1217 T12: -0.0140 REMARK 3 T13: 0.0254 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.0659 L22: 0.0684 REMARK 3 L33: 0.0591 L12: -0.0792 REMARK 3 L13: 0.1868 L23: 0.0154 REMARK 3 S TENSOR REMARK 3 S11: 0.0705 S12: -0.0805 S13: -0.2164 REMARK 3 S21: 0.1479 S22: 0.0376 S23: -0.2285 REMARK 3 S31: 0.2555 S32: 0.2072 S33: -0.0001 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 118 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3107 22.6283 16.8431 REMARK 3 T TENSOR REMARK 3 T11: 0.2506 T22: 0.1860 REMARK 3 T33: 0.1636 T12: -0.0306 REMARK 3 T13: -0.0309 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.2755 L22: 0.6973 REMARK 3 L33: 1.3623 L12: 0.1448 REMARK 3 L13: -0.3614 L23: -0.0367 REMARK 3 S TENSOR REMARK 3 S11: -0.0058 S12: -0.2989 S13: 0.1167 REMARK 3 S21: 0.0665 S22: 0.0577 S23: -0.0405 REMARK 3 S31: -0.3448 S32: 0.1285 S33: 0.0739 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 155 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1617 15.5014 16.2585 REMARK 3 T TENSOR REMARK 3 T11: 0.2279 T22: 0.1777 REMARK 3 T33: 0.1399 T12: 0.0403 REMARK 3 T13: 0.0012 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 0.9311 L22: 0.7530 REMARK 3 L33: 0.4382 L12: 1.0187 REMARK 3 L13: -0.5368 L23: -0.5910 REMARK 3 S TENSOR REMARK 3 S11: -0.0224 S12: -0.0182 S13: 0.0250 REMARK 3 S21: 0.0095 S22: -0.0993 S23: -0.1968 REMARK 3 S31: 0.0055 S32: -0.0842 S33: -0.0017 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 179 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5345 28.5100 19.5457 REMARK 3 T TENSOR REMARK 3 T11: 0.3432 T22: 0.1532 REMARK 3 T33: 0.1660 T12: -0.0178 REMARK 3 T13: -0.0423 T23: -0.0506 REMARK 3 L TENSOR REMARK 3 L11: 1.0450 L22: 0.5910 REMARK 3 L33: 0.5288 L12: -0.6445 REMARK 3 L13: -0.1091 L23: -0.1968 REMARK 3 S TENSOR REMARK 3 S11: -0.0613 S12: -0.2557 S13: 0.2595 REMARK 3 S21: 0.2208 S22: 0.0848 S23: 0.0713 REMARK 3 S31: -0.4715 S32: 0.0879 S33: 0.0142 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TCQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 06-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1292105219. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28445 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 28.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : 0.19700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.88900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6TCM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH7 AND 20% PEG 4000. REMARK 280 CRYSTALS WERE CRYOPROTECTED WITH 12% PEG 400 AND 17% GLYCEROL, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.01650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.75450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.30750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.75450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.01650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 48.30750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -25.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 136 REMARK 465 LYS H 137 REMARK 465 SER H 138 REMARK 465 THR H 139 REMARK 465 SER H 140 REMARK 465 SER H 223 REMARK 465 CYS H 224 REMARK 465 HIS H 225 REMARK 465 HIS H 226 REMARK 465 HIS H 227 REMARK 465 HIS H 228 REMARK 465 HIS H 229 REMARK 465 HIS H 230 REMARK 465 CYS L 218 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU H 1 N CD OE1 OE2 REMARK 470 ARG H 19 CG CD NE CZ NH1 NH2 REMARK 470 LYS H 44 CE NZ REMARK 470 LYS H 65 CG CD CE NZ REMARK 470 LYS H 76 NZ REMARK 470 GLU H 89 CD OE1 OE2 REMARK 470 GLN H 113 CD NE2 REMARK 470 SER H 135 OG REMARK 470 THR H 143 OG1 CG2 REMARK 470 LEU H 197 CG CD1 CD2 REMARK 470 THR H 199 CG2 REMARK 470 LYS H 209 CE NZ REMARK 470 LYS H 214 CD CE NZ REMARK 470 LYS H 218 CD CE NZ REMARK 470 GLU H 220 OE1 OE2 REMARK 470 LYS H 222 CG CD CE NZ REMARK 470 GLN L 3 CD OE1 NE2 REMARK 470 LYS L 107 NZ REMARK 470 GLU L 109 CG CD OE1 OE2 REMARK 470 LYS L 130 CE NZ REMARK 470 ARG L 146 NH1 NH2 REMARK 470 LYS L 149 CE NZ REMARK 470 LEU L 158 CG CD1 CD2 REMARK 470 LEU L 185 CD1 REMARK 470 LYS L 194 CE NZ REMARK 470 GLU L 217 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH H 403 O HOH L 564 2.15 REMARK 500 O HOH H 405 O HOH H 410 2.15 REMARK 500 O HOH H 341 O HOH H 417 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE H 103 58.86 39.26 REMARK 500 ASP H 152 67.34 70.67 REMARK 500 TYR L 36 70.55 -101.01 REMARK 500 ALA L 55 -38.48 74.46 REMARK 500 ASN L 156 -8.86 75.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 301 DBREF 6TCQ H 1 230 PDB 6TCQ 6TCQ 1 230 DBREF 6TCQ L 1 218 PDB 6TCQ 6TCQ 1 218 SEQRES 1 H 230 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 230 PRO GLY GLY SER LEU ARG LEU SER CYS ALA VAL SER GLY SEQRES 3 H 230 TYR SER ILE THR SER GLY TYR SER TRP ASN TRP ILE ARG SEQRES 4 H 230 GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SER ILE SEQRES 5 H 230 THR TYR ASP GLY SER THR ASN TYR ASN PRO SER VAL LYS SEQRES 6 H 230 GLY ARG ILE THR ILE SER ARG ASP ASP SER LYS ASN THR SEQRES 7 H 230 PHE TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 H 230 ALA VAL TYR TYR CYS ALA ARG GLY SER HIS TYR PHE GLY SEQRES 9 H 230 HIS TRP HIS PHE ALA VAL TRP GLY GLN GLY THR LEU VAL SEQRES 10 H 230 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 H 230 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 H 230 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 H 230 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 H 230 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 H 230 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 H 230 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 H 230 LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO SEQRES 18 H 230 LYS SER CYS HIS HIS HIS HIS HIS HIS SEQRES 1 L 218 ASP ILE GLN LEU THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 218 SER VAL GLY ASP ARG VAL THR ILE THR CYS ARG ALA SER SEQRES 3 L 218 GLN SER VAL ASP TYR ASP GLY ASP SER TYR MET ASN TRP SEQRES 4 L 218 TYR GLN GLN LYS PRO GLY LYS ALA PRO LYS LEU LEU ILE SEQRES 5 L 218 TYR ALA ALA SER TYR LEU GLU SER GLY VAL PRO SER ARG SEQRES 6 L 218 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU THR SEQRES 7 L 218 ILE SER ARG LEU ARG PRO GLU ASP PHE ALA THR TYR TYR SEQRES 8 L 218 CYS GLN GLN SER HIS GLU ASP PRO TYR THR PHE GLY GLN SEQRES 9 L 218 GLY THR LYS VAL GLU ILE LYS ARG THR VAL ALA ALA PRO SEQRES 10 L 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 L 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 L 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 L 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 L 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 L 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 L 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 L 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS HET GOL L 301 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *304(H2 O) HELIX 1 AA1 ASP H 74 LYS H 76 5 3 HELIX 2 AA2 ARG H 87 THR H 91 5 5 HELIX 3 AA3 SER H 164 ALA H 166 5 3 HELIX 4 AA4 SER H 195 GLY H 198 5 4 HELIX 5 AA5 LYS H 209 ASN H 212 5 4 HELIX 6 AA6 ARG L 83 PHE L 87 5 5 HELIX 7 AA7 SER L 125 SER L 131 1 7 HELIX 8 AA8 LYS L 187 GLU L 191 1 5 SHEET 1 AA1 4 LEU H 4 SER H 7 0 SHEET 2 AA1 4 LEU H 18 VAL H 24 -1 O ALA H 23 N VAL H 5 SHEET 3 AA1 4 THR H 78 MET H 83 -1 O MET H 83 N LEU H 18 SHEET 4 AA1 4 ILE H 68 ASP H 73 -1 N ASP H 73 O THR H 78 SHEET 1 AA2 6 GLY H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 115 VAL H 119 1 O THR H 118 N VAL H 12 SHEET 3 AA2 6 ALA H 92 TYR H 102 -1 N TYR H 94 O THR H 115 SHEET 4 AA2 6 SER H 34 GLN H 40 -1 N ILE H 38 O TYR H 95 SHEET 5 AA2 6 LEU H 46 ILE H 52 -1 O GLU H 47 N ARG H 39 SHEET 6 AA2 6 THR H 58 TYR H 60 -1 O ASN H 59 N SER H 51 SHEET 1 AA3 4 GLY H 10 VAL H 12 0 SHEET 2 AA3 4 THR H 115 VAL H 119 1 O THR H 118 N VAL H 12 SHEET 3 AA3 4 ALA H 92 TYR H 102 -1 N TYR H 94 O THR H 115 SHEET 4 AA3 4 HIS H 105 TRP H 111 -1 O VAL H 110 N ARG H 98 SHEET 1 AA4 4 SER H 128 LEU H 132 0 SHEET 2 AA4 4 THR H 143 TYR H 153 -1 O GLY H 147 N LEU H 132 SHEET 3 AA4 4 TYR H 184 PRO H 193 -1 O LEU H 186 N VAL H 150 SHEET 4 AA4 4 VAL H 171 THR H 173 -1 N HIS H 172 O VAL H 189 SHEET 1 AA5 4 SER H 128 LEU H 132 0 SHEET 2 AA5 4 THR H 143 TYR H 153 -1 O GLY H 147 N LEU H 132 SHEET 3 AA5 4 TYR H 184 PRO H 193 -1 O LEU H 186 N VAL H 150 SHEET 4 AA5 4 VAL H 177 LEU H 178 -1 N VAL H 177 O SER H 185 SHEET 1 AA6 3 THR H 159 TRP H 162 0 SHEET 2 AA6 3 ILE H 203 HIS H 208 -1 O ASN H 205 N SER H 161 SHEET 3 AA6 3 THR H 213 LYS H 218 -1 O VAL H 215 N VAL H 206 SHEET 1 AA7 4 LEU L 4 SER L 7 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 AA7 4 ASP L 74 ILE L 79 -1 O ILE L 79 N VAL L 19 SHEET 4 AA7 4 PHE L 66 SER L 71 -1 N SER L 67 O THR L 78 SHEET 1 AA8 6 SER L 10 SER L 14 0 SHEET 2 AA8 6 THR L 106 LYS L 111 1 O GLU L 109 N LEU L 11 SHEET 3 AA8 6 ALA L 88 GLN L 94 -1 N ALA L 88 O VAL L 108 SHEET 4 AA8 6 MET L 37 GLN L 42 -1 N ASN L 38 O GLN L 93 SHEET 5 AA8 6 LYS L 49 TYR L 53 -1 O LEU L 51 N TRP L 39 SHEET 6 AA8 6 TYR L 57 LEU L 58 -1 O TYR L 57 N TYR L 53 SHEET 1 AA9 4 SER L 10 SER L 14 0 SHEET 2 AA9 4 THR L 106 LYS L 111 1 O GLU L 109 N LEU L 11 SHEET 3 AA9 4 ALA L 88 GLN L 94 -1 N ALA L 88 O VAL L 108 SHEET 4 AA9 4 THR L 101 PHE L 102 -1 O THR L 101 N GLN L 94 SHEET 1 AB1 2 ASP L 30 TYR L 31 0 SHEET 2 AB1 2 ASP L 34 SER L 35 -1 O ASP L 34 N TYR L 31 SHEET 1 AB2 4 SER L 118 PHE L 122 0 SHEET 2 AB2 4 THR L 133 PHE L 143 -1 O LEU L 139 N PHE L 120 SHEET 3 AB2 4 TYR L 177 SER L 186 -1 O LEU L 185 N ALA L 134 SHEET 4 AB2 4 SER L 163 VAL L 167 -1 N GLN L 164 O THR L 182 SHEET 1 AB3 4 ALA L 157 LEU L 158 0 SHEET 2 AB3 4 LYS L 149 VAL L 154 -1 N VAL L 154 O ALA L 157 SHEET 3 AB3 4 VAL L 195 THR L 201 -1 O ALA L 197 N LYS L 153 SHEET 4 AB3 4 VAL L 209 ASN L 214 -1 O VAL L 209 N VAL L 200 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.05 SSBOND 2 CYS H 148 CYS H 204 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 92 1555 1555 2.09 SSBOND 4 CYS L 138 CYS L 198 1555 1555 2.06 CISPEP 1 PHE H 154 PRO H 155 0 -6.66 CISPEP 2 GLU H 156 PRO H 157 0 -0.20 CISPEP 3 SER L 7 PRO L 8 0 -6.91 CISPEP 4 SER L 7 PRO L 8 0 -4.58 CISPEP 5 ASP L 98 PRO L 99 0 -8.98 CISPEP 6 TYR L 144 PRO L 145 0 -0.41 SITE 1 AC1 12 PHE H 174 PRO H 175 VAL H 177 SER H 185 SITE 2 AC1 12 LEU H 186 SER H 187 GLN L 164 SER L 166 SITE 3 AC1 12 SER L 180 SER L 181 THR L 182 HOH L 403 CRYST1 44.033 96.615 103.509 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022710 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010350 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009661 0.00000