HEADER DNA BINDING PROTEIN 12-NOV-19 6TEY TITLE SOLUTION STRUCTURE OF THE DNA-BINDING TUBR FRAGMENT FROM CLOSTRIDIUM TITLE 2 BOTULINUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING PROTEIN TUBR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CENTROMERE-BINDING PROTEIN,CBP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM BOTULINUM C PHAGE; SOURCE 3 ORGANISM_TAXID: 12336; SOURCE 4 GENE: TUBR, CST190; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DNA SEGREGATION, PARTITION SYSTEMS, TUBR, WINGED HELIX-TURN-HELIX, KEYWDS 2 DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.VALVERDE,F.J.CANADA,J.JIMENEZ-BARBERO,M.A.OLIVA REVDAT 2 14-JUN-23 6TEY 1 REMARK REVDAT 1 18-NOV-20 6TEY 0 JRNL AUTH P.VALVERDE,F.J.CANADA,J.JIMENEZ-BARBERO,M.A.OLIVA JRNL TITL STRUCTURE OF TUBR PROTEIN FRAGMENT FROM CLOSTRIDIUM JRNL TITL 2 BOTULINUM'S PHAGE C-ST JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, MOLPROBITY, AMBER REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 RICHARDSON (MOLPROBITY), CASE, DARDEN, CHEATHAM REMARK 3 III, SIMMERLING, WANG, DUKE, LUO, ... AND KOLLMAN REMARK 3 (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TEY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1292103360. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.4 REMARK 210 IONIC STRENGTH : 80.13 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 225 UM [U-15N] TUBR, 25 MM REMARK 210 POTASSIUM PHOSPHATE, 50 MM REMARK 210 POTASSIUM CHLORIDE, 2 MM D-10 REMARK 210 DTT, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D HN(CO)CA; 3D HNCA; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 H(CCO)NH; 2D 1H-1H NOESY; 2D 1H- REMARK 210 15N HSQC; 2D 1H-13C HSQC; 2D 1H- REMARK 210 13C HSQC AROMATIC; 3D C(CO)NH; REMARK 210 3D HCCH-TOCSY; 3D 1H-15N NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, CARA, MOLPROBITY REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 150 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 5 CYS A 19 57.92 -102.84 REMARK 500 8 THR A 21 164.91 179.67 REMARK 500 8 LEU A 52 5.71 -68.39 REMARK 500 8 GLN A 53 -21.20 66.76 REMARK 500 9 ASN A 6 -48.90 73.32 REMARK 500 9 CYS A 19 44.15 -85.21 REMARK 500 9 GLN A 53 -3.42 98.19 REMARK 500 10 GLN A 53 11.76 59.61 REMARK 500 11 GLN A 53 -6.58 89.19 REMARK 500 12 ASN A 6 -74.64 -101.76 REMARK 500 12 GLN A 53 12.05 59.55 REMARK 500 14 CYS A 19 68.82 -118.09 REMARK 500 14 GLN A 53 -11.58 63.00 REMARK 500 15 LYS A 5 3.06 -66.15 REMARK 500 15 ASN A 6 -76.17 -80.72 REMARK 500 15 LYS A 36 15.48 58.78 REMARK 500 15 GLN A 53 0.83 93.96 REMARK 500 17 VAL A 3 47.19 35.39 REMARK 500 17 LYS A 5 8.62 -64.18 REMARK 500 17 CYS A 19 47.69 -88.30 REMARK 500 17 GLN A 53 -4.19 69.75 REMARK 500 19 ASN A 6 -39.22 70.16 REMARK 500 20 ASN A 6 -61.76 -102.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34449 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF THE DNA-BINDING TUBR FRAGMENT FROM REMARK 900 CLOSTRIDIUM BOTULINUM DBREF 6TEY A 1 81 UNP Q331T6 TUBR_CBCP 1 81 SEQRES 1 A 81 MET ALA VAL ASN LYS ASN GLU TYR LYS ILE LEU ILE MET SEQRES 2 A 81 LEU LYS GLU ASN GLN CYS THR THR GLU LEU LYS SER PHE SEQRES 3 A 81 THR TYR THR LYS LEU CYS ASN ILE SER LYS LEU SER MET SEQRES 4 A 81 SER THR VAL ARG ARG SER ILE LYS LYS PHE LEU GLU LEU SEQRES 5 A 81 GLN TYR VAL LYS GLU GLY CYS LYS GLN GLY ILE SER LYS SEQRES 6 A 81 THR PHE TYR ILE THR PRO ASN GLY ILE GLU LYS LEU LYS SEQRES 7 A 81 SER ILE MET HELIX 1 AA1 ASN A 4 GLN A 18 1 15 HELIX 2 AA2 THR A 27 SER A 35 1 9 HELIX 3 AA3 SER A 38 LEU A 52 1 15 HELIX 4 AA4 THR A 70 ILE A 80 1 11 SHEET 1 AA1 2 VAL A 55 GLU A 57 0 SHEET 2 AA1 2 PHE A 67 ILE A 69 -1 O TYR A 68 N LYS A 56 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1