HEADER BIOSYNTHETIC PROTEIN 15-NOV-19 6TG5 TITLE SOLUTION STRUCTURE OF MACPD, A ACYL CARRIER PROTEIN, FROM PSEUDOMONAS TITLE 2 FLUORESCENS INVOLVED IN MUPIROCIN BIOSYNTHESIS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MACPD; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: RESIDUES 1-33 ARE VECTOR DERIVED CYSTEINE 80 HAS BEEN COMPND 6 MUTATED TO A ALANINE FOR STRUCTURAL STUDIES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 294; SOURCE 4 GENE: MACPD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET151/D-TOPO KEYWDS MUPIROCIN, ACYL CARRIER PROTEIN, ACYL STARTER UNITS, THIOMARINOL, KEYWDS 2 BIOSYNTHESIS, PSEUDOMONAS FLUORESCENS, BIOSYNTHETIC PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.WILLIAMS,M.P.CRUMP REVDAT 3 14-JUN-23 6TG5 1 REMARK REVDAT 2 04-MAR-20 6TG5 1 JRNL REVDAT 1 19-FEB-20 6TG5 0 JRNL AUTH P.D.WALKER,M.T.ROWE,A.J.WINTER,A.N.M.WEIR,N.AKTER,L.WANG, JRNL AUTH 2 P.R.RACE,C.WILLIAMS,Z.SONG,T.J.SIMPSON,C.L.WILLIS,M.P.CRUMP JRNL TITL A PRIMING CASSETTE GENERATES HYDROXYLATED ACYL STARTER UNITS JRNL TITL 2 IN MUPIROCIN AND THIOMARINOL BIOSYNTHESIS. JRNL REF ACS CHEM.BIOL. V. 15 494 2020 JRNL REFN ESSN 1554-8937 JRNL PMID 31977176 JRNL DOI 10.1021/ACSCHEMBIO.9B00969 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA, CNS REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES (ARIA), BRUNGER, REMARK 3 ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TG5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1292105387. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.7 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 15N] MACPD, ACYL REMARK 210 CARRIER PROTEIN, 0.1 MM SODIUM REMARK 210 AZIDE, 50 MM SODIUM PHOSPHATE, REMARK 210 90% H2O/10% D2O; 1 MM [U-99% 13C; REMARK 210 U-99% 15N] MACPD, ACYL CARRIER REMARK 210 PROTEIN, 50 MM SODIUM PHOSPHATE, REMARK 210 0.1 MM SODIUM AZIDE, 90% H2O/10% REMARK 210 D2O; 1 MM MACPD, ACYL CARRIER REMARK 210 PROTEIN, 50 MM SODIUM PHOSPHATE, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-1H NOESY; REMARK 210 3D HNCO; 3D HNCA; 3D HN(CO)CA; REMARK 210 3D C(CO)NH; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D HCCH-TOCSY; 3D 1H-13C REMARK 210 NOESY; 3D 1H-15N NOESY; 3D 1H- REMARK 210 15N TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : VNMRS; AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : AGILENT; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : ARIA, CCPNMR ANALYSIS, TOPSPIN REMARK 210 3.5, VNMR 4, NMRDRAW, TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 250 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A -31 REMARK 465 HIS A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 GLY A -24 REMARK 465 LYS A -23 REMARK 465 PRO A -22 REMARK 465 ILE A -21 REMARK 465 PRO A -20 REMARK 465 ASN A -19 REMARK 465 PRO A -18 REMARK 465 LEU A -17 REMARK 465 LEU A -16 REMARK 465 GLY A -15 REMARK 465 LEU A -14 REMARK 465 ASP A -13 REMARK 465 SER A -12 REMARK 465 THR A -11 REMARK 465 GLU A -10 REMARK 465 ASN A -9 REMARK 465 LEU A -8 REMARK 465 TYR A -7 REMARK 465 PHE A -6 REMARK 465 GLN A -5 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 62 96.90 -166.78 REMARK 500 1 GLN A 85 30.84 -87.18 REMARK 500 2 ILE A -3 92.40 66.89 REMARK 500 2 ASP A 62 93.10 55.17 REMARK 500 2 ALA A 67 30.30 -96.76 REMARK 500 2 GLN A 105 55.47 -90.17 REMARK 500 3 ASP A 94 117.76 -170.90 REMARK 500 3 GLN A 105 -61.10 -122.15 REMARK 500 4 ASP A 62 115.96 71.37 REMARK 500 4 LEU A 100 52.45 -98.96 REMARK 500 5 ASP A 62 110.67 75.97 REMARK 500 6 ALA A 69 140.09 68.75 REMARK 500 6 ASP A 102 -65.78 -98.83 REMARK 500 6 LEU A 103 -65.78 -179.25 REMARK 500 6 ARG A 104 -166.58 -169.39 REMARK 500 7 ASP A 62 75.92 58.72 REMARK 500 8 ASP A 62 72.60 56.60 REMARK 500 8 PHE A 64 10.14 -66.85 REMARK 500 8 ALA A 67 28.14 -78.32 REMARK 500 8 VAL A 74 -60.07 -105.98 REMARK 500 8 GLN A 105 71.64 -110.01 REMARK 500 9 ASP A 62 109.73 60.20 REMARK 500 9 ALA A 69 98.74 -65.46 REMARK 500 11 ASP A 62 84.32 -150.09 REMARK 500 11 ASP A 94 113.89 65.82 REMARK 500 11 ARG A 104 71.64 65.48 REMARK 500 12 ILE A -3 36.32 -89.20 REMARK 500 12 ARG A 104 39.38 -90.42 REMARK 500 13 ASP A 62 104.60 169.32 REMARK 500 13 VAL A 74 -60.24 -93.00 REMARK 500 13 GLN A 105 75.20 61.89 REMARK 500 14 VAL A 68 -72.33 -110.25 REMARK 500 14 ALA A 69 122.70 -174.28 REMARK 500 15 ASP A 62 121.69 175.94 REMARK 500 15 VAL A 74 -60.70 -103.88 REMARK 500 16 ALA A 69 131.76 66.99 REMARK 500 16 LEU A 100 39.23 -77.09 REMARK 500 17 ARG A 101 -60.50 -96.00 REMARK 500 17 GLN A 105 32.88 -90.40 REMARK 500 18 ILE A -3 70.22 56.61 REMARK 500 18 ASP A 62 103.27 70.79 REMARK 500 19 ASP A 62 91.54 163.69 REMARK 500 19 VAL A 74 -50.47 -120.58 REMARK 500 19 PRO A 89 109.82 -59.84 REMARK 500 19 ASP A 102 -60.51 -95.34 REMARK 500 20 VAL A 68 -70.79 -99.90 REMARK 500 20 PRO A 89 109.23 -54.35 REMARK 500 20 GLN A 105 47.76 -84.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 34451 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF MACPD, A ACYL CARRIER PROTEIN, FROM REMARK 900 PSEUDOMONAS FLUORESCENS INVOLVED IN MUPIROCIN BIOSYNTHESIS. DBREF 6TG5 A 2 106 UNP Q8RL52 Q8RL52_PSEFL 2 106 SEQADV 6TG5 MET A -31 UNP Q8RL52 INITIATING METHIONINE SEQADV 6TG5 HIS A -30 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 HIS A -29 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 HIS A -28 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 HIS A -27 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 HIS A -26 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 HIS A -25 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 GLY A -24 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 LYS A -23 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 PRO A -22 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 ILE A -21 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 PRO A -20 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 ASN A -19 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 PRO A -18 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 LEU A -17 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 LEU A -16 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 GLY A -15 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 LEU A -14 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 ASP A -13 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 SER A -12 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 THR A -11 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 GLU A -10 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 ASN A -9 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 LEU A -8 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 TYR A -7 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 PHE A -6 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 GLN A -5 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 GLY A -4 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 ILE A -3 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 ASP A -2 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 PRO A -1 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 PHE A 0 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 THR A 1 UNP Q8RL52 EXPRESSION TAG SEQADV 6TG5 ALA A 80 UNP Q8RL52 CYS 80 CONFLICT SEQRES 1 A 138 MET HIS HIS HIS HIS HIS HIS GLY LYS PRO ILE PRO ASN SEQRES 2 A 138 PRO LEU LEU GLY LEU ASP SER THR GLU ASN LEU TYR PHE SEQRES 3 A 138 GLN GLY ILE ASP PRO PHE THR LEU ASN HIS GLN VAL MET SEQRES 4 A 138 ASP GLN VAL PHE ASP GLN VAL GLU HIS GLN ILE ALA GLN SEQRES 5 A 138 VAL LEU GLY ALA LYS GLY GLY PRO LEU VAL ALA VAL GLU SEQRES 6 A 138 ILE ASP SER ARG PHE SER ASP LEU GLY LEU SER SER LEU SEQRES 7 A 138 ASP LEU ALA THR LEU ILE SER ASN LEU GLU ALA VAL TYR SEQRES 8 A 138 GLY THR ASP PRO PHE ALA ASP ALA VAL ALA ILE THR SER SEQRES 9 A 138 ILE VAL THR VAL ALA ASP LEU ALA ARG ALA TYR ALA GLN SEQRES 10 A 138 GLN GLY VAL PRO GLY PRO SER PRO ASP PRO LEU ASP ALA SEQRES 11 A 138 GLN LEU ARG ASP LEU ARG GLN LEU HELIX 1 AA1 ASP A -2 GLY A 26 1 29 HELIX 2 AA2 ARG A 37 GLY A 42 1 6 HELIX 3 AA3 SER A 44 GLY A 60 1 17 HELIX 4 AA4 ALA A 69 ILE A 73 5 5 HELIX 5 AA5 THR A 75 GLN A 85 1 11 HELIX 6 AA6 ASP A 94 LEU A 103 1 10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1