HEADER APOPTOSIS 18-NOV-19 6TGY TITLE CRYO-EM STRUCTURE OF P62-PB1 FILAMENT (L-TYPE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SEQUESTOSOME-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EBI3-ASSOCIATED PROTEIN OF 60 KDA,P60,PHOSPHOTYROSINE- COMPND 5 INDEPENDENT LIGAND FOR THE LCK SH2 DOMAIN OF 62 KDA,UBIQUITIN-BINDING COMPND 6 PROTEIN P62; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SQSTM1, ORCA, OSIL; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS AUTOPHAGY, APOPTOSIS EXPDTA ELECTRON MICROSCOPY AUTHOR A.J.JAKOBI,S.T.HUBER,S.A.MORTENSEN,C.SACHSE REVDAT 1 12-FEB-20 6TGY 0 JRNL AUTH A.J.JAKOBI,S.T.HUBER,S.A.MORTENSEN,S.W.SCHULTZ,A.PALARA, JRNL AUTH 2 T.KUHM,B.K.SHRESTHA,T.LAMARK,W.J.H.HAGEN,M.WILMANNS, JRNL AUTH 3 T.JOHANSEN,A.BRECH,C.SACHSE JRNL TITL STRUCTURAL BASIS OF P62/SQSTM1 HELICAL FILAMENTS AND THEIR JRNL TITL 2 ROLE IN CELLULAR CARGO UPTAKE. JRNL REF NAT COMMUN V. 11 440 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 31974402 JRNL DOI 10.1038/S41467-020-14343-8 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SPRING, SERIALEM, GCTF, PHENIX, RELION, REMARK 3 RELION, RELION, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 2KKC REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.500 REMARK 3 NUMBER OF PARTICLES : 51853 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6TGY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1292105447. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : P62-PB1 DOMAIN FILAMENT (L REMARK 245 -TYPE) REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 2277 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 40.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 120-MERIC REMARK 350 SOFTWARE USED: UCSF CHIMERA 1.12_B41623. REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.931691 0.363251 0.000000 208.79073 REMARK 350 BIOMT2 2 -0.363251 -0.931691 0.000000 305.50274 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -143.61000 REMARK 350 BIOMT1 3 0.149363 0.988782 0.000000 -18.38989 REMARK 350 BIOMT2 3 -0.988782 0.149363 0.000000 244.86355 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -138.82300 REMARK 350 BIOMT1 4 0.997416 0.071846 0.000000 -9.22007 REMARK 350 BIOMT2 4 -0.071846 0.997416 0.000000 9.90810 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -134.03600 REMARK 350 BIOMT1 5 0.289533 -0.957168 0.000000 221.99557 REMARK 350 BIOMT2 5 0.957168 0.289533 0.000000 -32.84084 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 -129.24900 REMARK 350 BIOMT1 6 -0.870012 -0.493031 0.000000 314.56825 REMARK 350 BIOMT2 6 0.493031 -0.870012 0.000000 183.30366 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 -124.46200 REMARK 350 BIOMT1 7 -0.672367 0.740218 0.000000 124.08763 REMARK 350 BIOMT2 7 -0.740218 -0.672367 0.000000 321.16331 REMARK 350 BIOMT3 7 0.000000 0.000000 1.000000 -119.67500 REMARK 350 BIOMT1 8 0.574148 0.818751 0.000000 -52.30279 REMARK 350 BIOMT2 8 -0.818751 0.574148 0.000000 165.68158 REMARK 350 BIOMT3 8 0.000000 0.000000 1.000000 -114.88800 REMARK 350 BIOMT1 9 0.925011 -0.379941 0.000000 60.56023 REMARK 350 BIOMT2 9 0.379941 0.925011 0.000000 -40.59514 REMARK 350 BIOMT3 9 0.000000 0.000000 1.000000 -110.10100 REMARK 350 BIOMT1 10 -0.167113 -0.985938 0.000000 286.61411 REMARK 350 BIOMT2 10 0.985938 -0.167113 0.000000 24.11804 REMARK 350 BIOMT3 10 0.000000 0.000000 1.000000 -105.31400 REMARK 350 BIOMT1 11 -0.998546 -0.053905 0.000000 273.22223 REMARK 350 BIOMT2 11 0.053905 -0.998546 0.000000 258.87068 REMARK 350 BIOMT3 11 0.000000 0.000000 1.000000 -100.52700 REMARK 350 BIOMT1 12 -0.272280 0.962218 0.000000 41.27549 REMARK 350 BIOMT2 12 -0.962218 -0.272280 0.000000 297.45641 REMARK 350 BIOMT3 12 0.000000 0.000000 1.000000 -95.74000 REMARK 350 BIOMT1 13 0.878734 0.477312 0.000000 -47.39684 REMARK 350 BIOMT2 13 -0.477312 0.878734 0.000000 79.68275 REMARK 350 BIOMT3 13 0.000000 0.000000 1.000000 -90.95300 REMARK 350 BIOMT1 14 0.658952 -0.752185 0.000000 145.53116 REMARK 350 BIOMT2 14 0.752185 0.658952 0.000000 -54.73056 REMARK 350 BIOMT3 14 0.000000 0.000000 1.000000 -86.16600 REMARK 350 BIOMT1 15 -0.588773 -0.808298 0.000000 319.09816 REMARK 350 BIOMT2 15 0.808298 -0.588773 0.000000 103.89682 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 -81.37900 REMARK 350 BIOMT1 16 -0.918032 0.396507 0.000000 202.54535 REMARK 350 BIOMT2 16 -0.396507 -0.918032 0.000000 308.11140 REMARK 350 BIOMT3 16 0.000000 0.000000 1.000000 -76.59200 REMARK 350 BIOMT1 17 0.184809 0.982774 0.000000 -22.30872 REMARK 350 BIOMT2 17 -0.982774 0.184809 0.000000 239.34515 REMARK 350 BIOMT3 17 0.000000 0.000000 1.000000 -71.80500 REMARK 350 BIOMT1 18 0.999354 0.035946 0.000000 -4.69911 REMARK 350 BIOMT2 18 -0.035946 0.999354 0.000000 4.87117 REMARK 350 BIOMT3 18 0.000000 0.000000 1.000000 -67.01800 REMARK 350 BIOMT1 19 0.254939 -0.966957 0.000000 227.90377 REMARK 350 BIOMT2 19 0.966957 0.254939 0.000000 -29.53886 REMARK 350 BIOMT3 19 0.000000 0.000000 1.000000 -62.23100 REMARK 350 BIOMT1 20 -0.887172 -0.461439 0.000000 312.64709 REMARK 350 BIOMT2 20 0.461439 -0.887172 0.000000 189.79358 REMARK 350 BIOMT3 20 0.000000 0.000000 1.000000 -57.44400 REMARK 350 BIOMT1 21 -0.645324 0.763909 0.000000 117.33406 REMARK 350 BIOMT2 21 -0.763909 -0.645324 0.000000 320.71710 REMARK 350 BIOMT3 21 0.000000 0.000000 1.000000 -52.65700 REMARK 350 BIOMT1 22 0.603208 0.797584 0.000000 -53.35342 REMARK 350 BIOMT2 22 -0.797584 0.603208 0.000000 158.99533 REMARK 350 BIOMT3 22 0.000000 0.000000 1.000000 -47.87000 REMARK 350 BIOMT1 23 0.910756 -0.412945 0.000000 66.85150 REMARK 350 BIOMT2 23 0.412945 0.910756 0.000000 -43.09111 REMARK 350 BIOMT3 23 0.000000 0.000000 1.000000 -43.08300 REMARK 350 BIOMT1 24 -0.202445 -0.979294 0.000000 290.43310 REMARK 350 BIOMT2 24 0.979294 -0.202445 0.000000 29.70599 REMARK 350 BIOMT3 24 0.000000 0.000000 1.000000 -38.29600 REMARK 350 BIOMT1 25 -0.999838 -0.017976 0.000000 268.61145 REMARK 350 BIOMT2 25 0.017976 -0.999838 0.000000 263.82554 REMARK 350 BIOMT3 25 0.000000 0.000000 1.000000 -33.50900 REMARK 350 BIOMT1 26 -0.237516 0.971384 0.000000 35.42760 REMARK 350 BIOMT2 26 -0.971384 -0.237516 0.000000 294.04875 REMARK 350 BIOMT3 26 0.000000 0.000000 1.000000 -28.72200 REMARK 350 BIOMT1 27 0.895323 0.445417 0.000000 -45.35932 REMARK 350 BIOMT2 27 -0.445417 0.895323 0.000000 73.22842 REMARK 350 BIOMT3 27 0.000000 0.000000 1.000000 -23.93500 REMARK 350 BIOMT1 28 0.631488 -0.775386 0.000000 152.27562 REMARK 350 BIOMT2 28 0.775386 0.631488 0.000000 -54.16302 REMARK 350 BIOMT3 28 0.000000 0.000000 1.000000 -19.14800 REMARK 350 BIOMT1 29 -0.617448 -0.786612 0.000000 320.02842 REMARK 350 BIOMT2 29 0.786612 -0.617448 0.000000 110.60089 REMARK 350 BIOMT3 29 0.000000 0.000000 1.000000 -14.36100 REMARK 350 BIOMT1 30 -0.903186 0.429250 0.000000 196.21024 REMARK 350 BIOMT2 30 -0.429250 -0.903186 0.000000 310.49387 REMARK 350 BIOMT3 30 0.000000 0.000000 1.000000 -9.57400 REMARK 350 BIOMT1 31 0.220016 0.975496 0.000000 -26.02664 REMARK 350 BIOMT2 31 -0.975496 0.220016 0.000000 233.68946 REMARK 350 BIOMT3 31 0.000000 0.000000 1.000000 -4.78700 REMARK 350 BIOMT1 32 0.220016 -0.975496 0.000000 233.68946 REMARK 350 BIOMT2 32 0.975496 0.220016 0.000000 -26.02664 REMARK 350 BIOMT3 32 0.000000 0.000000 1.000000 4.78700 REMARK 350 BIOMT1 33 -0.903186 -0.429250 0.000000 310.49387 REMARK 350 BIOMT2 33 0.429250 -0.903186 0.000000 196.21024 REMARK 350 BIOMT3 33 0.000000 0.000000 1.000000 9.57400 REMARK 350 BIOMT1 34 -0.617448 0.786612 0.000000 110.60089 REMARK 350 BIOMT2 34 -0.786612 -0.617448 0.000000 320.02842 REMARK 350 BIOMT3 34 0.000000 0.000000 1.000000 14.36100 REMARK 350 BIOMT1 35 0.631488 0.775386 0.000000 -54.16302 REMARK 350 BIOMT2 35 -0.775386 0.631488 0.000000 152.27562 REMARK 350 BIOMT3 35 0.000000 0.000000 1.000000 19.14800 REMARK 350 BIOMT1 36 0.895323 -0.445417 0.000000 73.22842 REMARK 350 BIOMT2 36 0.445417 0.895323 0.000000 -45.35932 REMARK 350 BIOMT3 36 0.000000 0.000000 1.000000 23.93500 REMARK 350 BIOMT1 37 -0.237516 -0.971384 0.000000 294.04875 REMARK 350 BIOMT2 37 0.971384 -0.237516 0.000000 35.42760 REMARK 350 BIOMT3 37 0.000000 0.000000 1.000000 28.72200 REMARK 350 BIOMT1 38 -0.999838 0.017976 0.000000 263.82554 REMARK 350 BIOMT2 38 -0.017976 -0.999838 0.000000 268.61145 REMARK 350 BIOMT3 38 0.000000 0.000000 1.000000 33.50900 REMARK 350 BIOMT1 39 -0.202445 0.979294 0.000000 29.70599 REMARK 350 BIOMT2 39 -0.979294 -0.202445 0.000000 290.43310 REMARK 350 BIOMT3 39 0.000000 0.000000 1.000000 38.29600 REMARK 350 BIOMT1 40 0.910756 0.412945 0.000000 -43.09111 REMARK 350 BIOMT2 40 -0.412945 0.910756 0.000000 66.85150 REMARK 350 BIOMT3 40 0.000000 0.000000 1.000000 43.08300 REMARK 350 BIOMT1 41 0.603208 -0.797584 0.000000 158.99533 REMARK 350 BIOMT2 41 0.797584 0.603208 0.000000 -53.35342 REMARK 350 BIOMT3 41 0.000000 0.000000 1.000000 47.87000 REMARK 350 BIOMT1 42 -0.645324 -0.763909 0.000000 320.71710 REMARK 350 BIOMT2 42 0.763909 -0.645324 0.000000 117.33406 REMARK 350 BIOMT3 42 0.000000 0.000000 1.000000 52.65700 REMARK 350 BIOMT1 43 -0.887172 0.461439 0.000000 189.79358 REMARK 350 BIOMT2 43 -0.461439 -0.887172 0.000000 312.64709 REMARK 350 BIOMT3 43 0.000000 0.000000 1.000000 57.44400 REMARK 350 BIOMT1 44 0.254939 0.966957 0.000000 -29.53886 REMARK 350 BIOMT2 44 -0.966957 0.254939 0.000000 227.90377 REMARK 350 BIOMT3 44 0.000000 0.000000 1.000000 62.23100 REMARK 350 BIOMT1 45 0.999354 -0.035946 0.000000 4.87117 REMARK 350 BIOMT2 45 0.035946 0.999354 0.000000 -4.69911 REMARK 350 BIOMT3 45 0.000000 0.000000 1.000000 67.01800 REMARK 350 BIOMT1 46 0.184809 -0.982774 0.000000 239.34515 REMARK 350 BIOMT2 46 0.982774 0.184809 0.000000 -22.30872 REMARK 350 BIOMT3 46 0.000000 0.000000 1.000000 71.80500 REMARK 350 BIOMT1 47 -0.918032 -0.396507 0.000000 308.11140 REMARK 350 BIOMT2 47 0.396507 -0.918032 0.000000 202.54535 REMARK 350 BIOMT3 47 0.000000 0.000000 1.000000 76.59200 REMARK 350 BIOMT1 48 -0.588773 0.808298 0.000000 103.89682 REMARK 350 BIOMT2 48 -0.808298 -0.588773 0.000000 319.09816 REMARK 350 BIOMT3 48 0.000000 0.000000 1.000000 81.37900 REMARK 350 BIOMT1 49 0.658952 0.752185 0.000000 -54.73056 REMARK 350 BIOMT2 49 -0.752185 0.658952 0.000000 145.53116 REMARK 350 BIOMT3 49 0.000000 0.000000 1.000000 86.16600 REMARK 350 BIOMT1 50 0.878734 -0.477312 0.000000 79.68275 REMARK 350 BIOMT2 50 0.477312 0.878734 0.000000 -47.39684 REMARK 350 BIOMT3 50 0.000000 0.000000 1.000000 90.95300 REMARK 350 BIOMT1 51 -0.272280 -0.962218 0.000000 297.45641 REMARK 350 BIOMT2 51 0.962218 -0.272280 0.000000 41.27549 REMARK 350 BIOMT3 51 0.000000 0.000000 1.000000 95.74000 REMARK 350 BIOMT1 52 -0.998546 0.053905 0.000000 258.87068 REMARK 350 BIOMT2 52 -0.053905 -0.998546 0.000000 273.22223 REMARK 350 BIOMT3 52 0.000000 0.000000 1.000000 100.52700 REMARK 350 BIOMT1 53 -0.167113 0.985938 0.000000 24.11804 REMARK 350 BIOMT2 53 -0.985938 -0.167113 0.000000 286.61411 REMARK 350 BIOMT3 53 0.000000 0.000000 1.000000 105.31400 REMARK 350 BIOMT1 54 0.925011 0.379941 0.000000 -40.59514 REMARK 350 BIOMT2 54 -0.379941 0.925011 0.000000 60.56023 REMARK 350 BIOMT3 54 0.000000 0.000000 1.000000 110.10100 REMARK 350 BIOMT1 55 0.574148 -0.818751 0.000000 165.68158 REMARK 350 BIOMT2 55 0.818751 0.574148 0.000000 -52.30279 REMARK 350 BIOMT3 55 0.000000 0.000000 1.000000 114.88800 REMARK 350 BIOMT1 56 -0.672367 -0.740218 0.000000 321.16331 REMARK 350 BIOMT2 56 0.740218 -0.672367 0.000000 124.08763 REMARK 350 BIOMT3 56 0.000000 0.000000 1.000000 119.67500 REMARK 350 BIOMT1 57 -0.870012 0.493031 0.000000 183.30366 REMARK 350 BIOMT2 57 -0.493031 -0.870012 0.000000 314.56825 REMARK 350 BIOMT3 57 0.000000 0.000000 1.000000 124.46200 REMARK 350 BIOMT1 58 0.289533 0.957168 0.000000 -32.84084 REMARK 350 BIOMT2 58 -0.957168 0.289533 0.000000 221.99557 REMARK 350 BIOMT3 58 0.000000 0.000000 1.000000 129.24900 REMARK 350 BIOMT1 59 0.997416 -0.071846 0.000000 9.90810 REMARK 350 BIOMT2 59 0.071846 0.997416 0.000000 -9.22007 REMARK 350 BIOMT3 59 0.000000 0.000000 1.000000 134.03600 REMARK 350 BIOMT1 60 0.149363 -0.988782 0.000000 244.86355 REMARK 350 BIOMT2 60 0.988782 0.149363 0.000000 -18.38989 REMARK 350 BIOMT3 60 0.000000 0.000000 1.000000 138.82300 REMARK 350 BIOMT1 61 0.931691 -0.363251 0.000000 57.44927 REMARK 350 BIOMT2 61 0.363251 0.931691 0.000000 -39.26274 REMARK 350 BIOMT3 61 0.000000 0.000000 1.000000 -143.61000 REMARK 350 BIOMT1 62 -0.149363 -0.988782 0.000000 284.62989 REMARK 350 BIOMT2 62 0.988782 -0.149363 0.000000 21.37645 REMARK 350 BIOMT3 62 0.000000 0.000000 1.000000 -138.82300 REMARK 350 BIOMT1 63 -0.997416 -0.071846 0.000000 275.46007 REMARK 350 BIOMT2 63 0.071846 -0.997416 0.000000 256.33190 REMARK 350 BIOMT3 63 0.000000 0.000000 1.000000 -134.03600 REMARK 350 BIOMT1 64 -0.289533 0.957168 0.000000 44.24443 REMARK 350 BIOMT2 64 -0.957168 -0.289533 0.000000 299.08084 REMARK 350 BIOMT3 64 0.000000 0.000000 1.000000 -129.24900 REMARK 350 BIOMT1 65 0.870012 0.493031 0.000000 -48.32825 REMARK 350 BIOMT2 65 -0.493031 0.870012 0.000000 82.93634 REMARK 350 BIOMT3 65 0.000000 0.000000 1.000000 -124.46200 REMARK 350 BIOMT1 66 0.672367 -0.740218 0.000000 142.15237 REMARK 350 BIOMT2 66 0.740218 0.672367 0.000000 -54.92331 REMARK 350 BIOMT3 66 0.000000 0.000000 1.000000 -119.67500 REMARK 350 BIOMT1 67 -0.574148 -0.818751 0.000000 318.54279 REMARK 350 BIOMT2 67 0.818751 -0.574148 0.000000 100.55842 REMARK 350 BIOMT3 67 0.000000 0.000000 1.000000 -114.88800 REMARK 350 BIOMT1 68 -0.925011 0.379941 0.000000 205.67977 REMARK 350 BIOMT2 68 -0.379941 -0.925011 0.000000 306.83514 REMARK 350 BIOMT3 68 0.000000 0.000000 1.000000 -110.10100 REMARK 350 BIOMT1 69 0.167113 0.985938 0.000000 -20.37411 REMARK 350 BIOMT2 69 -0.985938 0.167113 0.000000 242.12196 REMARK 350 BIOMT3 69 0.000000 0.000000 1.000000 -105.31400 REMARK 350 BIOMT1 70 0.998546 0.053905 0.000000 -6.98223 REMARK 350 BIOMT2 70 -0.053905 0.998546 0.000000 7.36932 REMARK 350 BIOMT3 70 0.000000 0.000000 1.000000 -100.52700 REMARK 350 BIOMT1 71 0.272280 -0.962218 0.000000 224.96451 REMARK 350 BIOMT2 71 0.962218 0.272280 0.000000 -31.21641 REMARK 350 BIOMT3 71 0.000000 0.000000 1.000000 -95.74000 REMARK 350 BIOMT1 72 -0.878734 -0.477312 0.000000 313.63684 REMARK 350 BIOMT2 72 0.477312 -0.878734 0.000000 186.55725 REMARK 350 BIOMT3 72 0.000000 0.000000 1.000000 -90.95300 REMARK 350 BIOMT1 73 -0.658952 0.752185 0.000000 120.70884 REMARK 350 BIOMT2 73 -0.752185 -0.658952 0.000000 320.97056 REMARK 350 BIOMT3 73 0.000000 0.000000 1.000000 -86.16600 REMARK 350 BIOMT1 74 0.588773 0.808298 0.000000 -52.85816 REMARK 350 BIOMT2 74 -0.808298 0.588773 0.000000 162.34318 REMARK 350 BIOMT3 74 0.000000 0.000000 1.000000 -81.37900 REMARK 350 BIOMT1 75 0.918032 -0.396507 0.000000 63.69465 REMARK 350 BIOMT2 75 0.396507 0.918032 0.000000 -41.87140 REMARK 350 BIOMT3 75 0.000000 0.000000 1.000000 -76.59200 REMARK 350 BIOMT1 76 -0.184809 -0.982774 0.000000 288.54872 REMARK 350 BIOMT2 76 0.982774 -0.184809 0.000000 26.89485 REMARK 350 BIOMT3 76 0.000000 0.000000 1.000000 -71.80500 REMARK 350 BIOMT1 77 -0.999354 -0.035946 0.000000 270.93911 REMARK 350 BIOMT2 77 0.035946 -0.999354 0.000000 261.36883 REMARK 350 BIOMT3 77 0.000000 0.000000 1.000000 -67.01800 REMARK 350 BIOMT1 78 -0.254939 0.966957 0.000000 38.33623 REMARK 350 BIOMT2 78 -0.966957 -0.254939 0.000000 295.77886 REMARK 350 BIOMT3 78 0.000000 0.000000 1.000000 -62.23100 REMARK 350 BIOMT1 79 0.887172 0.461439 0.000000 -46.40709 REMARK 350 BIOMT2 79 -0.461439 0.887172 0.000000 76.44642 REMARK 350 BIOMT3 79 0.000000 0.000000 1.000000 -57.44400 REMARK 350 BIOMT1 80 0.645324 -0.763909 0.000000 148.90594 REMARK 350 BIOMT2 80 0.763909 0.645324 0.000000 -54.47710 REMARK 350 BIOMT3 80 0.000000 0.000000 1.000000 -52.65700 REMARK 350 BIOMT1 81 -0.603208 -0.797584 0.000000 319.59342 REMARK 350 BIOMT2 81 0.797584 -0.603208 0.000000 107.24467 REMARK 350 BIOMT3 81 0.000000 0.000000 1.000000 -47.87000 REMARK 350 BIOMT1 82 -0.910756 0.412945 0.000000 199.38850 REMARK 350 BIOMT2 82 -0.412945 -0.910756 0.000000 309.33111 REMARK 350 BIOMT3 82 0.000000 0.000000 1.000000 -43.08300 REMARK 350 BIOMT1 83 0.202445 0.979294 0.000000 -24.19310 REMARK 350 BIOMT2 83 -0.979294 0.202445 0.000000 236.53401 REMARK 350 BIOMT3 83 0.000000 0.000000 1.000000 -38.29600 REMARK 350 BIOMT1 84 0.999838 0.017976 0.000000 -2.37145 REMARK 350 BIOMT2 84 -0.017976 0.999838 0.000000 2.41446 REMARK 350 BIOMT3 84 0.000000 0.000000 1.000000 -33.50900 REMARK 350 BIOMT1 85 0.237516 -0.971384 0.000000 230.81240 REMARK 350 BIOMT2 85 0.971384 0.237516 0.000000 -27.80875 REMARK 350 BIOMT3 85 0.000000 0.000000 1.000000 -28.72200 REMARK 350 BIOMT1 86 -0.895323 -0.445417 0.000000 311.59932 REMARK 350 BIOMT2 86 0.445417 -0.895323 0.000000 193.01158 REMARK 350 BIOMT3 86 0.000000 0.000000 1.000000 -23.93500 REMARK 350 BIOMT1 87 -0.631488 0.775386 0.000000 113.96438 REMARK 350 BIOMT2 87 -0.775386 -0.631488 0.000000 320.40302 REMARK 350 BIOMT3 87 0.000000 0.000000 1.000000 -19.14800 REMARK 350 BIOMT1 88 0.617448 0.786612 0.000000 -53.78842 REMARK 350 BIOMT2 88 -0.786612 0.617448 0.000000 155.63911 REMARK 350 BIOMT3 88 0.000000 0.000000 1.000000 -14.36100 REMARK 350 BIOMT1 89 0.903186 -0.429250 0.000000 70.02976 REMARK 350 BIOMT2 89 0.429250 0.903186 0.000000 -44.25387 REMARK 350 BIOMT3 89 0.000000 0.000000 1.000000 -9.57400 REMARK 350 BIOMT1 90 -0.220016 -0.975496 0.000000 292.26664 REMARK 350 BIOMT2 90 0.975496 -0.220016 0.000000 32.55054 REMARK 350 BIOMT3 90 0.000000 0.000000 1.000000 -4.78700 REMARK 350 BIOMT1 91 -1.000000 0.000000 0.000000 266.24000 REMARK 350 BIOMT2 91 0.000000 -1.000000 0.000000 266.24000 REMARK 350 BIOMT3 91 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 92 -0.220016 0.975496 0.000000 32.55054 REMARK 350 BIOMT2 92 -0.975496 -0.220016 0.000000 292.26664 REMARK 350 BIOMT3 92 0.000000 0.000000 1.000000 4.78700 REMARK 350 BIOMT1 93 0.903186 0.429250 0.000000 -44.25387 REMARK 350 BIOMT2 93 -0.429250 0.903186 0.000000 70.02976 REMARK 350 BIOMT3 93 0.000000 0.000000 1.000000 9.57400 REMARK 350 BIOMT1 94 0.617448 -0.786612 0.000000 155.63911 REMARK 350 BIOMT2 94 0.786612 0.617448 0.000000 -53.78842 REMARK 350 BIOMT3 94 0.000000 0.000000 1.000000 14.36100 REMARK 350 BIOMT1 95 -0.631488 -0.775386 0.000000 320.40302 REMARK 350 BIOMT2 95 0.775386 -0.631488 0.000000 113.96438 REMARK 350 BIOMT3 95 0.000000 0.000000 1.000000 19.14800 REMARK 350 BIOMT1 96 -0.895323 0.445417 0.000000 193.01158 REMARK 350 BIOMT2 96 -0.445417 -0.895323 0.000000 311.59932 REMARK 350 BIOMT3 96 0.000000 0.000000 1.000000 23.93500 REMARK 350 BIOMT1 97 0.237516 0.971384 0.000000 -27.80875 REMARK 350 BIOMT2 97 -0.971384 0.237516 0.000000 230.81240 REMARK 350 BIOMT3 97 0.000000 0.000000 1.000000 28.72200 REMARK 350 BIOMT1 98 0.999838 -0.017976 0.000000 2.41446 REMARK 350 BIOMT2 98 0.017976 0.999838 0.000000 -2.37145 REMARK 350 BIOMT3 98 0.000000 0.000000 1.000000 33.50900 REMARK 350 BIOMT1 99 0.202445 -0.979294 0.000000 236.53401 REMARK 350 BIOMT2 99 0.979294 0.202445 0.000000 -24.19310 REMARK 350 BIOMT3 99 0.000000 0.000000 1.000000 38.29600 REMARK 350 BIOMT1 100 -0.910756 -0.412945 0.000000 309.33111 REMARK 350 BIOMT2 100 0.412945 -0.910756 0.000000 199.38850 REMARK 350 BIOMT3 100 0.000000 0.000000 1.000000 43.08300 REMARK 350 BIOMT1 101 -0.603208 0.797584 0.000000 107.24467 REMARK 350 BIOMT2 101 -0.797584 -0.603208 0.000000 319.59342 REMARK 350 BIOMT3 101 0.000000 0.000000 1.000000 47.87000 REMARK 350 BIOMT1 102 0.645324 0.763909 0.000000 -54.47710 REMARK 350 BIOMT2 102 -0.763909 0.645324 0.000000 148.90594 REMARK 350 BIOMT3 102 0.000000 0.000000 1.000000 52.65700 REMARK 350 BIOMT1 103 0.887172 -0.461439 0.000000 76.44642 REMARK 350 BIOMT2 103 0.461439 0.887172 0.000000 -46.40709 REMARK 350 BIOMT3 103 0.000000 0.000000 1.000000 57.44400 REMARK 350 BIOMT1 104 -0.254939 -0.966957 0.000000 295.77886 REMARK 350 BIOMT2 104 0.966957 -0.254939 0.000000 38.33623 REMARK 350 BIOMT3 104 0.000000 0.000000 1.000000 62.23100 REMARK 350 BIOMT1 105 -0.999354 0.035946 0.000000 261.36883 REMARK 350 BIOMT2 105 -0.035946 -0.999354 0.000000 270.93911 REMARK 350 BIOMT3 105 0.000000 0.000000 1.000000 67.01800 REMARK 350 BIOMT1 106 -0.184809 0.982774 0.000000 26.89485 REMARK 350 BIOMT2 106 -0.982774 -0.184809 0.000000 288.54872 REMARK 350 BIOMT3 106 0.000000 0.000000 1.000000 71.80500 REMARK 350 BIOMT1 107 0.918032 0.396507 0.000000 -41.87140 REMARK 350 BIOMT2 107 -0.396507 0.918032 0.000000 63.69465 REMARK 350 BIOMT3 107 0.000000 0.000000 1.000000 76.59200 REMARK 350 BIOMT1 108 0.588773 -0.808298 0.000000 162.34318 REMARK 350 BIOMT2 108 0.808298 0.588773 0.000000 -52.85816 REMARK 350 BIOMT3 108 0.000000 0.000000 1.000000 81.37900 REMARK 350 BIOMT1 109 -0.658952 -0.752185 0.000000 320.97056 REMARK 350 BIOMT2 109 0.752185 -0.658952 0.000000 120.70884 REMARK 350 BIOMT3 109 0.000000 0.000000 1.000000 86.16600 REMARK 350 BIOMT1 110 -0.878734 0.477312 0.000000 186.55725 REMARK 350 BIOMT2 110 -0.477312 -0.878734 0.000000 313.63684 REMARK 350 BIOMT3 110 0.000000 0.000000 1.000000 90.95300 REMARK 350 BIOMT1 111 0.272280 0.962218 0.000000 -31.21641 REMARK 350 BIOMT2 111 -0.962218 0.272280 0.000000 224.96451 REMARK 350 BIOMT3 111 0.000000 0.000000 1.000000 95.74000 REMARK 350 BIOMT1 112 0.998546 -0.053905 0.000000 7.36932 REMARK 350 BIOMT2 112 0.053905 0.998546 0.000000 -6.98223 REMARK 350 BIOMT3 112 0.000000 0.000000 1.000000 100.52700 REMARK 350 BIOMT1 113 0.167113 -0.985938 0.000000 242.12196 REMARK 350 BIOMT2 113 0.985938 0.167113 0.000000 -20.37411 REMARK 350 BIOMT3 113 0.000000 0.000000 1.000000 105.31400 REMARK 350 BIOMT1 114 -0.925011 -0.379941 0.000000 306.83514 REMARK 350 BIOMT2 114 0.379941 -0.925011 0.000000 205.67977 REMARK 350 BIOMT3 114 0.000000 0.000000 1.000000 110.10100 REMARK 350 BIOMT1 115 -0.574148 0.818751 0.000000 100.55842 REMARK 350 BIOMT2 115 -0.818751 -0.574148 0.000000 318.54279 REMARK 350 BIOMT3 115 0.000000 0.000000 1.000000 114.88800 REMARK 350 BIOMT1 116 0.672367 0.740218 0.000000 -54.92331 REMARK 350 BIOMT2 116 -0.740218 0.672367 0.000000 142.15237 REMARK 350 BIOMT3 116 0.000000 0.000000 1.000000 119.67500 REMARK 350 BIOMT1 117 0.870012 -0.493031 0.000000 82.93634 REMARK 350 BIOMT2 117 0.493031 0.870012 0.000000 -48.32825 REMARK 350 BIOMT3 117 0.000000 0.000000 1.000000 124.46200 REMARK 350 BIOMT1 118 -0.289533 -0.957168 0.000000 299.08084 REMARK 350 BIOMT2 118 0.957168 -0.289533 0.000000 44.24443 REMARK 350 BIOMT3 118 0.000000 0.000000 1.000000 129.24900 REMARK 350 BIOMT1 119 -0.997416 0.071846 0.000000 256.33190 REMARK 350 BIOMT2 119 -0.071846 -0.997416 0.000000 275.46007 REMARK 350 BIOMT3 119 0.000000 0.000000 1.000000 134.03600 REMARK 350 BIOMT1 120 -0.149363 0.988782 0.000000 21.37645 REMARK 350 BIOMT2 120 -0.988782 -0.149363 0.000000 284.62989 REMARK 350 BIOMT3 120 0.000000 0.000000 1.000000 138.82300 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ARG A 106 REMARK 465 ARG A 107 REMARK 465 ASP A 108 REMARK 465 HIS A 109 REMARK 465 ARG A 110 REMARK 465 PRO A 111 REMARK 465 PRO A 112 REMARK 465 CYS A 113 REMARK 465 ALA A 114 REMARK 465 GLN A 115 REMARK 465 GLU A 116 REMARK 465 ALA A 117 REMARK 465 PRO A 118 REMARK 465 ARG A 119 REMARK 465 ASN A 120 REMARK 465 MET A 121 REMARK 465 VAL A 122 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 22 75.29 57.12 REMARK 500 PRO A 31 -169.83 -72.97 REMARK 500 ALA A 39 86.81 -154.74 REMARK 500 LYS A 91 -65.41 -92.83 REMARK 500 ASP A 92 -67.29 -105.36 REMARK 500 ASP A 93 16.95 -145.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-10500 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-10499 RELATED DB: EMDB REMARK 900 RELATED ID: 6TGP RELATED DB: PDB REMARK 900 RELATED ID: 6TGN RELATED DB: PDB REMARK 900 RELATED ID: EMD-10501 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF P62-PB1 FILAMENT (L-TYPE) DBREF 6TGY A 1 122 UNP Q13501 SQSTM_HUMAN 1 122 SEQRES 1 A 122 MET ALA SER LEU THR VAL LYS ALA TYR LEU LEU GLY LYS SEQRES 2 A 122 GLU ASP ALA ALA ARG GLU ILE ARG ARG PHE SER PHE CYS SEQRES 3 A 122 CYS SER PRO GLU PRO GLU ALA GLU ALA GLU ALA ALA ALA SEQRES 4 A 122 GLY PRO GLY PRO CYS GLU ARG LEU LEU SER ARG VAL ALA SEQRES 5 A 122 ALA LEU PHE PRO ALA LEU ARG PRO GLY GLY PHE GLN ALA SEQRES 6 A 122 HIS TYR ARG ASP GLU ASP GLY ASP LEU VAL ALA PHE SER SEQRES 7 A 122 SER ASP GLU GLU LEU THR MET ALA MET SER TYR VAL LYS SEQRES 8 A 122 ASP ASP ILE PHE ARG ILE TYR ILE LYS GLU LYS LYS GLU SEQRES 9 A 122 CYS ARG ARG ASP HIS ARG PRO PRO CYS ALA GLN GLU ALA SEQRES 10 A 122 PRO ARG ASN MET VAL HELIX 1 AA1 GLY A 42 PHE A 55 1 14 HELIX 2 AA2 GLU A 82 MET A 87 1 6 HELIX 3 AA3 SER A 88 VAL A 90 5 3 SHEET 1 AA1 3 ALA A 17 ILE A 20 0 SHEET 2 AA1 3 LEU A 4 LEU A 11 -1 N LEU A 10 O ARG A 18 SHEET 3 AA1 3 PHE A 23 PHE A 25 -1 O PHE A 25 N LEU A 4 SHEET 1 AA2 5 ALA A 17 ILE A 20 0 SHEET 2 AA2 5 LEU A 4 LEU A 11 -1 N LEU A 10 O ARG A 18 SHEET 3 AA2 5 ILE A 94 GLU A 101 1 O ILE A 99 N TYR A 9 SHEET 4 AA2 5 PHE A 63 ARG A 68 -1 N GLN A 64 O LYS A 100 SHEET 5 AA2 5 LEU A 74 ALA A 76 -1 O VAL A 75 N TYR A 67 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000