data_6TH3 # _entry.id 6TH3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.322 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6TH3 WWPDB D_1292105455 EMDB EMD-10502 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB . EMD-10501 'other EM volume' EMDB . EMD-10500 'other EM volume' EMDB . EMD-10499 'other EM volume' EMDB 'Cryo-EM structure of p62-PB1 filament (L-type)' EMD-10502 'associated EM volume' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6TH3 _pdbx_database_status.recvd_initial_deposition_date 2019-11-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Jakobi, A.J.' 1 0000-0002-7761-2027 'Huber, S.T.' 2 ? 'Mortensen, S.A.' 3 ? 'Sachse, C.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first 440 _citation.page_last 440 _citation.title 'Structural basis of p62/SQSTM1 helical filaments and their role in cellular cargo uptake.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-020-14343-8 _citation.pdbx_database_id_PubMed 31974402 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jakobi, A.J.' 1 0000-0002-7761-2027 primary 'Huber, S.T.' 2 0000-0003-3721-5104 primary 'Mortensen, S.A.' 3 ? primary 'Schultz, S.W.' 4 ? primary 'Palara, A.' 5 ? primary 'Kuhm, T.' 6 ? primary 'Shrestha, B.K.' 7 ? primary 'Lamark, T.' 8 0000-0001-6338-3342 primary 'Hagen, W.J.H.' 9 ? primary 'Wilmanns, M.' 10 0000-0002-4643-5435 primary 'Johansen, T.' 11 0000-0003-1451-9578 primary 'Brech, A.' 12 ? primary 'Sachse, C.' 13 0000-0002-1168-5143 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Sequestosome-1 _entity.formula_weight 13704.609 _entity.pdbx_number_of_molecules 3 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;EBI3-associated protein of 60 kDa,p60,Phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa,Ubiquitin-binding protein p62 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSD EELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRNMV ; _entity_poly.pdbx_seq_one_letter_code_can ;MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSD EELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRNMV ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 SER n 1 4 LEU n 1 5 THR n 1 6 VAL n 1 7 LYS n 1 8 ALA n 1 9 TYR n 1 10 LEU n 1 11 LEU n 1 12 GLY n 1 13 LYS n 1 14 GLU n 1 15 ASP n 1 16 ALA n 1 17 ALA n 1 18 ARG n 1 19 GLU n 1 20 ILE n 1 21 ARG n 1 22 ARG n 1 23 PHE n 1 24 SER n 1 25 PHE n 1 26 CYS n 1 27 CYS n 1 28 SER n 1 29 PRO n 1 30 GLU n 1 31 PRO n 1 32 GLU n 1 33 ALA n 1 34 GLU n 1 35 ALA n 1 36 GLU n 1 37 ALA n 1 38 ALA n 1 39 ALA n 1 40 GLY n 1 41 PRO n 1 42 GLY n 1 43 PRO n 1 44 CYS n 1 45 GLU n 1 46 ARG n 1 47 LEU n 1 48 LEU n 1 49 SER n 1 50 ARG n 1 51 VAL n 1 52 ALA n 1 53 ALA n 1 54 LEU n 1 55 PHE n 1 56 PRO n 1 57 ALA n 1 58 LEU n 1 59 ARG n 1 60 PRO n 1 61 GLY n 1 62 GLY n 1 63 PHE n 1 64 GLN n 1 65 ALA n 1 66 HIS n 1 67 TYR n 1 68 ARG n 1 69 ASP n 1 70 GLU n 1 71 ASP n 1 72 GLY n 1 73 ASP n 1 74 LEU n 1 75 VAL n 1 76 ALA n 1 77 PHE n 1 78 SER n 1 79 SER n 1 80 ASP n 1 81 GLU n 1 82 GLU n 1 83 LEU n 1 84 THR n 1 85 MET n 1 86 ALA n 1 87 MET n 1 88 SER n 1 89 TYR n 1 90 VAL n 1 91 LYS n 1 92 ASP n 1 93 ASP n 1 94 ILE n 1 95 PHE n 1 96 ARG n 1 97 ILE n 1 98 TYR n 1 99 ILE n 1 100 LYS n 1 101 GLU n 1 102 LYS n 1 103 LYS n 1 104 GLU n 1 105 CYS n 1 106 ARG n 1 107 ARG n 1 108 ASP n 1 109 HIS n 1 110 ARG n 1 111 PRO n 1 112 PRO n 1 113 CYS n 1 114 ALA n 1 115 GLN n 1 116 GLU n 1 117 ALA n 1 118 PRO n 1 119 ARG n 1 120 ASN n 1 121 MET n 1 122 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 122 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SQSTM1, ORCA, OSIL' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SQSTM_HUMAN _struct_ref.pdbx_db_accession Q13501 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MASLTVKAYLLGKEDAAREIRRFSFCCSPEPEAEAEAAAGPGPCERLLSRVAALFPALRPGGFQAHYRDEDGDLVAFSSD EELTMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRNMV ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6TH3 A 1 ? 122 ? Q13501 1 ? 122 ? 1 122 2 1 6TH3 B 1 ? 122 ? Q13501 1 ? 122 ? 1 122 3 1 6TH3 C 1 ? 122 ? Q13501 1 ? 122 ? 1 122 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6TH3 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 6TH3 _struct.title 'Cryo-EM structure of p62-PB1 filament (S-type)' _struct.pdbx_descriptor Sequestosome-1 _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6TH3 _struct_keywords.text 'Autophagy, CYTOSOLIC PROTEIN' _struct_keywords.pdbx_keywords 'CYTOSOLIC PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 42 ? PHE A 55 ? GLY A 42 PHE A 55 1 ? 14 HELX_P HELX_P2 AA2 GLU A 82 ? MET A 87 ? GLU A 82 MET A 87 1 ? 6 HELX_P HELX_P3 AA3 SER A 88 ? VAL A 90 ? SER A 88 VAL A 90 5 ? 3 HELX_P HELX_P4 AA4 GLY B 42 ? PHE B 55 ? GLY B 42 PHE B 55 1 ? 14 HELX_P HELX_P5 AA5 GLU B 82 ? MET B 87 ? GLU B 82 MET B 87 1 ? 6 HELX_P HELX_P6 AA6 SER B 88 ? VAL B 90 ? SER B 88 VAL B 90 5 ? 3 HELX_P HELX_P7 AA7 GLY C 42 ? PHE C 55 ? GLY C 42 PHE C 55 1 ? 14 HELX_P HELX_P8 AA8 GLU C 82 ? MET C 87 ? GLU C 82 MET C 87 1 ? 6 HELX_P HELX_P9 AA9 SER C 88 ? VAL C 90 ? SER C 88 VAL C 90 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 5 ? AA3 ? 3 ? AA4 ? 5 ? AA5 ? 3 ? AA6 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 17 ? ILE A 20 ? ALA A 17 ILE A 20 AA1 2 LEU A 4 ? LEU A 11 ? LEU A 4 LEU A 11 AA1 3 PHE A 23 ? PHE A 25 ? PHE A 23 PHE A 25 AA2 1 ALA A 17 ? ILE A 20 ? ALA A 17 ILE A 20 AA2 2 LEU A 4 ? LEU A 11 ? LEU A 4 LEU A 11 AA2 3 ILE A 94 ? GLU A 101 ? ILE A 94 GLU A 101 AA2 4 PHE A 63 ? ARG A 68 ? PHE A 63 ARG A 68 AA2 5 LEU A 74 ? ALA A 76 ? LEU A 74 ALA A 76 AA3 1 ALA B 17 ? ILE B 20 ? ALA B 17 ILE B 20 AA3 2 LEU B 4 ? LEU B 11 ? LEU B 4 LEU B 11 AA3 3 PHE B 23 ? PHE B 25 ? PHE B 23 PHE B 25 AA4 1 ALA B 17 ? ILE B 20 ? ALA B 17 ILE B 20 AA4 2 LEU B 4 ? LEU B 11 ? LEU B 4 LEU B 11 AA4 3 ILE B 94 ? GLU B 101 ? ILE B 94 GLU B 101 AA4 4 PHE B 63 ? ARG B 68 ? PHE B 63 ARG B 68 AA4 5 LEU B 74 ? ALA B 76 ? LEU B 74 ALA B 76 AA5 1 ALA C 17 ? ILE C 20 ? ALA C 17 ILE C 20 AA5 2 LEU C 4 ? LEU C 11 ? LEU C 4 LEU C 11 AA5 3 PHE C 23 ? PHE C 25 ? PHE C 23 PHE C 25 AA6 1 ALA C 17 ? ILE C 20 ? ALA C 17 ILE C 20 AA6 2 LEU C 4 ? LEU C 11 ? LEU C 4 LEU C 11 AA6 3 ILE C 94 ? GLU C 101 ? ILE C 94 GLU C 101 AA6 4 PHE C 63 ? ARG C 68 ? PHE C 63 ARG C 68 AA6 5 LEU C 74 ? ALA C 76 ? LEU C 74 ALA C 76 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ARG A 18 ? O ARG A 18 N LEU A 10 ? N LEU A 10 AA1 2 3 N LEU A 4 ? N LEU A 4 O PHE A 25 ? O PHE A 25 AA2 1 2 O ARG A 18 ? O ARG A 18 N LEU A 10 ? N LEU A 10 AA2 2 3 N TYR A 9 ? N TYR A 9 O ILE A 99 ? O ILE A 99 AA2 3 4 O LYS A 100 ? O LYS A 100 N GLN A 64 ? N GLN A 64 AA2 4 5 N TYR A 67 ? N TYR A 67 O VAL A 75 ? O VAL A 75 AA3 1 2 O ARG B 18 ? O ARG B 18 N LEU B 10 ? N LEU B 10 AA3 2 3 N LEU B 4 ? N LEU B 4 O PHE B 25 ? O PHE B 25 AA4 1 2 O ARG B 18 ? O ARG B 18 N LEU B 10 ? N LEU B 10 AA4 2 3 N TYR B 9 ? N TYR B 9 O ILE B 99 ? O ILE B 99 AA4 3 4 O LYS B 100 ? O LYS B 100 N GLN B 64 ? N GLN B 64 AA4 4 5 N TYR B 67 ? N TYR B 67 O VAL B 75 ? O VAL B 75 AA5 1 2 O ARG C 18 ? O ARG C 18 N LEU C 10 ? N LEU C 10 AA5 2 3 N LEU C 4 ? N LEU C 4 O PHE C 25 ? O PHE C 25 AA6 1 2 O ARG C 18 ? O ARG C 18 N LEU C 10 ? N LEU C 10 AA6 2 3 N TYR C 9 ? N TYR C 9 O ILE C 99 ? O ILE C 99 AA6 3 4 O LYS C 100 ? O LYS C 100 N GLN C 64 ? N GLN C 64 AA6 4 5 N TYR C 67 ? N TYR C 67 O VAL C 75 ? O VAL C 75 # _atom_sites.entry_id 6TH3 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 TYR 9 9 9 TYR TYR A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ARG 18 18 18 ARG ARG A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 PRO 43 43 43 PRO PRO A . n A 1 44 CYS 44 44 44 CYS CYS A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 LEU 47 47 47 LEU LEU A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 ARG 50 50 50 ARG ARG A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 ALA 53 53 53 ALA ALA A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 TYR 67 67 67 TYR TYR A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 PHE 77 77 77 PHE PHE A . n A 1 78 SER 78 78 78 SER SER A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 MET 85 85 85 MET MET A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 MET 87 87 87 MET MET A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 VAL 90 90 90 VAL VAL A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 TYR 98 98 98 TYR TYR A . n A 1 99 ILE 99 99 99 ILE ILE A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 LYS 102 102 102 LYS LYS A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 CYS 105 105 105 CYS CYS A . n A 1 106 ARG 106 106 ? ? ? A . n A 1 107 ARG 107 107 ? ? ? A . n A 1 108 ASP 108 108 ? ? ? A . n A 1 109 HIS 109 109 ? ? ? A . n A 1 110 ARG 110 110 ? ? ? A . n A 1 111 PRO 111 111 ? ? ? A . n A 1 112 PRO 112 112 ? ? ? A . n A 1 113 CYS 113 113 ? ? ? A . n A 1 114 ALA 114 114 ? ? ? A . n A 1 115 GLN 115 115 ? ? ? A . n A 1 116 GLU 116 116 ? ? ? A . n A 1 117 ALA 117 117 ? ? ? A . n A 1 118 PRO 118 118 ? ? ? A . n A 1 119 ARG 119 119 ? ? ? A . n A 1 120 ASN 120 120 ? ? ? A . n A 1 121 MET 121 121 ? ? ? A . n A 1 122 VAL 122 122 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 ALA 2 2 2 ALA ALA B . n B 1 3 SER 3 3 3 SER SER B . n B 1 4 LEU 4 4 4 LEU LEU B . n B 1 5 THR 5 5 5 THR THR B . n B 1 6 VAL 6 6 6 VAL VAL B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 ALA 8 8 8 ALA ALA B . n B 1 9 TYR 9 9 9 TYR TYR B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 GLU 14 14 14 GLU GLU B . n B 1 15 ASP 15 15 15 ASP ASP B . n B 1 16 ALA 16 16 16 ALA ALA B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 ARG 18 18 18 ARG ARG B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 ILE 20 20 20 ILE ILE B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 ARG 22 22 22 ARG ARG B . n B 1 23 PHE 23 23 23 PHE PHE B . n B 1 24 SER 24 24 24 SER SER B . n B 1 25 PHE 25 25 25 PHE PHE B . n B 1 26 CYS 26 26 26 CYS CYS B . n B 1 27 CYS 27 27 27 CYS CYS B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 PRO 29 29 29 PRO PRO B . n B 1 30 GLU 30 30 30 GLU GLU B . n B 1 31 PRO 31 31 31 PRO PRO B . n B 1 32 GLU 32 32 32 GLU GLU B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 ALA 35 35 35 ALA ALA B . n B 1 36 GLU 36 36 36 GLU GLU B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 ALA 38 38 38 ALA ALA B . n B 1 39 ALA 39 39 39 ALA ALA B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 PRO 41 41 41 PRO PRO B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 PRO 43 43 43 PRO PRO B . n B 1 44 CYS 44 44 44 CYS CYS B . n B 1 45 GLU 45 45 45 GLU GLU B . n B 1 46 ARG 46 46 46 ARG ARG B . n B 1 47 LEU 47 47 47 LEU LEU B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 SER 49 49 49 SER SER B . n B 1 50 ARG 50 50 50 ARG ARG B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 ALA 53 53 53 ALA ALA B . n B 1 54 LEU 54 54 54 LEU LEU B . n B 1 55 PHE 55 55 55 PHE PHE B . n B 1 56 PRO 56 56 56 PRO PRO B . n B 1 57 ALA 57 57 57 ALA ALA B . n B 1 58 LEU 58 58 58 LEU LEU B . n B 1 59 ARG 59 59 59 ARG ARG B . n B 1 60 PRO 60 60 60 PRO PRO B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 GLY 62 62 62 GLY GLY B . n B 1 63 PHE 63 63 63 PHE PHE B . n B 1 64 GLN 64 64 64 GLN GLN B . n B 1 65 ALA 65 65 65 ALA ALA B . n B 1 66 HIS 66 66 66 HIS HIS B . n B 1 67 TYR 67 67 67 TYR TYR B . n B 1 68 ARG 68 68 68 ARG ARG B . n B 1 69 ASP 69 69 69 ASP ASP B . n B 1 70 GLU 70 70 70 GLU GLU B . n B 1 71 ASP 71 71 71 ASP ASP B . n B 1 72 GLY 72 72 72 GLY GLY B . n B 1 73 ASP 73 73 73 ASP ASP B . n B 1 74 LEU 74 74 74 LEU LEU B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 ALA 76 76 76 ALA ALA B . n B 1 77 PHE 77 77 77 PHE PHE B . n B 1 78 SER 78 78 78 SER SER B . n B 1 79 SER 79 79 79 SER SER B . n B 1 80 ASP 80 80 80 ASP ASP B . n B 1 81 GLU 81 81 81 GLU GLU B . n B 1 82 GLU 82 82 82 GLU GLU B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 THR 84 84 84 THR THR B . n B 1 85 MET 85 85 85 MET MET B . n B 1 86 ALA 86 86 86 ALA ALA B . n B 1 87 MET 87 87 87 MET MET B . n B 1 88 SER 88 88 88 SER SER B . n B 1 89 TYR 89 89 89 TYR TYR B . n B 1 90 VAL 90 90 90 VAL VAL B . n B 1 91 LYS 91 91 91 LYS LYS B . n B 1 92 ASP 92 92 92 ASP ASP B . n B 1 93 ASP 93 93 93 ASP ASP B . n B 1 94 ILE 94 94 94 ILE ILE B . n B 1 95 PHE 95 95 95 PHE PHE B . n B 1 96 ARG 96 96 96 ARG ARG B . n B 1 97 ILE 97 97 97 ILE ILE B . n B 1 98 TYR 98 98 98 TYR TYR B . n B 1 99 ILE 99 99 99 ILE ILE B . n B 1 100 LYS 100 100 100 LYS LYS B . n B 1 101 GLU 101 101 101 GLU GLU B . n B 1 102 LYS 102 102 102 LYS LYS B . n B 1 103 LYS 103 103 103 LYS LYS B . n B 1 104 GLU 104 104 104 GLU GLU B . n B 1 105 CYS 105 105 105 CYS CYS B . n B 1 106 ARG 106 106 ? ? ? B . n B 1 107 ARG 107 107 ? ? ? B . n B 1 108 ASP 108 108 ? ? ? B . n B 1 109 HIS 109 109 ? ? ? B . n B 1 110 ARG 110 110 ? ? ? B . n B 1 111 PRO 111 111 ? ? ? B . n B 1 112 PRO 112 112 ? ? ? B . n B 1 113 CYS 113 113 ? ? ? B . n B 1 114 ALA 114 114 ? ? ? B . n B 1 115 GLN 115 115 ? ? ? B . n B 1 116 GLU 116 116 ? ? ? B . n B 1 117 ALA 117 117 ? ? ? B . n B 1 118 PRO 118 118 ? ? ? B . n B 1 119 ARG 119 119 ? ? ? B . n B 1 120 ASN 120 120 ? ? ? B . n B 1 121 MET 121 121 ? ? ? B . n B 1 122 VAL 122 122 ? ? ? B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 ALA 2 2 2 ALA ALA C . n C 1 3 SER 3 3 3 SER SER C . n C 1 4 LEU 4 4 4 LEU LEU C . n C 1 5 THR 5 5 5 THR THR C . n C 1 6 VAL 6 6 6 VAL VAL C . n C 1 7 LYS 7 7 7 LYS LYS C . n C 1 8 ALA 8 8 8 ALA ALA C . n C 1 9 TYR 9 9 9 TYR TYR C . n C 1 10 LEU 10 10 10 LEU LEU C . n C 1 11 LEU 11 11 11 LEU LEU C . n C 1 12 GLY 12 12 12 GLY GLY C . n C 1 13 LYS 13 13 13 LYS LYS C . n C 1 14 GLU 14 14 14 GLU GLU C . n C 1 15 ASP 15 15 15 ASP ASP C . n C 1 16 ALA 16 16 16 ALA ALA C . n C 1 17 ALA 17 17 17 ALA ALA C . n C 1 18 ARG 18 18 18 ARG ARG C . n C 1 19 GLU 19 19 19 GLU GLU C . n C 1 20 ILE 20 20 20 ILE ILE C . n C 1 21 ARG 21 21 21 ARG ARG C . n C 1 22 ARG 22 22 22 ARG ARG C . n C 1 23 PHE 23 23 23 PHE PHE C . n C 1 24 SER 24 24 24 SER SER C . n C 1 25 PHE 25 25 25 PHE PHE C . n C 1 26 CYS 26 26 26 CYS CYS C . n C 1 27 CYS 27 27 27 CYS CYS C . n C 1 28 SER 28 28 28 SER SER C . n C 1 29 PRO 29 29 29 PRO PRO C . n C 1 30 GLU 30 30 30 GLU GLU C . n C 1 31 PRO 31 31 31 PRO PRO C . n C 1 32 GLU 32 32 32 GLU GLU C . n C 1 33 ALA 33 33 33 ALA ALA C . n C 1 34 GLU 34 34 34 GLU GLU C . n C 1 35 ALA 35 35 35 ALA ALA C . n C 1 36 GLU 36 36 36 GLU GLU C . n C 1 37 ALA 37 37 37 ALA ALA C . n C 1 38 ALA 38 38 38 ALA ALA C . n C 1 39 ALA 39 39 39 ALA ALA C . n C 1 40 GLY 40 40 40 GLY GLY C . n C 1 41 PRO 41 41 41 PRO PRO C . n C 1 42 GLY 42 42 42 GLY GLY C . n C 1 43 PRO 43 43 43 PRO PRO C . n C 1 44 CYS 44 44 44 CYS CYS C . n C 1 45 GLU 45 45 45 GLU GLU C . n C 1 46 ARG 46 46 46 ARG ARG C . n C 1 47 LEU 47 47 47 LEU LEU C . n C 1 48 LEU 48 48 48 LEU LEU C . n C 1 49 SER 49 49 49 SER SER C . n C 1 50 ARG 50 50 50 ARG ARG C . n C 1 51 VAL 51 51 51 VAL VAL C . n C 1 52 ALA 52 52 52 ALA ALA C . n C 1 53 ALA 53 53 53 ALA ALA C . n C 1 54 LEU 54 54 54 LEU LEU C . n C 1 55 PHE 55 55 55 PHE PHE C . n C 1 56 PRO 56 56 56 PRO PRO C . n C 1 57 ALA 57 57 57 ALA ALA C . n C 1 58 LEU 58 58 58 LEU LEU C . n C 1 59 ARG 59 59 59 ARG ARG C . n C 1 60 PRO 60 60 60 PRO PRO C . n C 1 61 GLY 61 61 61 GLY GLY C . n C 1 62 GLY 62 62 62 GLY GLY C . n C 1 63 PHE 63 63 63 PHE PHE C . n C 1 64 GLN 64 64 64 GLN GLN C . n C 1 65 ALA 65 65 65 ALA ALA C . n C 1 66 HIS 66 66 66 HIS HIS C . n C 1 67 TYR 67 67 67 TYR TYR C . n C 1 68 ARG 68 68 68 ARG ARG C . n C 1 69 ASP 69 69 69 ASP ASP C . n C 1 70 GLU 70 70 70 GLU GLU C . n C 1 71 ASP 71 71 71 ASP ASP C . n C 1 72 GLY 72 72 72 GLY GLY C . n C 1 73 ASP 73 73 73 ASP ASP C . n C 1 74 LEU 74 74 74 LEU LEU C . n C 1 75 VAL 75 75 75 VAL VAL C . n C 1 76 ALA 76 76 76 ALA ALA C . n C 1 77 PHE 77 77 77 PHE PHE C . n C 1 78 SER 78 78 78 SER SER C . n C 1 79 SER 79 79 79 SER SER C . n C 1 80 ASP 80 80 80 ASP ASP C . n C 1 81 GLU 81 81 81 GLU GLU C . n C 1 82 GLU 82 82 82 GLU GLU C . n C 1 83 LEU 83 83 83 LEU LEU C . n C 1 84 THR 84 84 84 THR THR C . n C 1 85 MET 85 85 85 MET MET C . n C 1 86 ALA 86 86 86 ALA ALA C . n C 1 87 MET 87 87 87 MET MET C . n C 1 88 SER 88 88 88 SER SER C . n C 1 89 TYR 89 89 89 TYR TYR C . n C 1 90 VAL 90 90 90 VAL VAL C . n C 1 91 LYS 91 91 91 LYS LYS C . n C 1 92 ASP 92 92 92 ASP ASP C . n C 1 93 ASP 93 93 93 ASP ASP C . n C 1 94 ILE 94 94 94 ILE ILE C . n C 1 95 PHE 95 95 95 PHE PHE C . n C 1 96 ARG 96 96 96 ARG ARG C . n C 1 97 ILE 97 97 97 ILE ILE C . n C 1 98 TYR 98 98 98 TYR TYR C . n C 1 99 ILE 99 99 99 ILE ILE C . n C 1 100 LYS 100 100 100 LYS LYS C . n C 1 101 GLU 101 101 101 GLU GLU C . n C 1 102 LYS 102 102 102 LYS LYS C . n C 1 103 LYS 103 103 103 LYS LYS C . n C 1 104 GLU 104 104 104 GLU GLU C . n C 1 105 CYS 105 105 105 CYS CYS C . n C 1 106 ARG 106 106 ? ? ? C . n C 1 107 ARG 107 107 ? ? ? C . n C 1 108 ASP 108 108 ? ? ? C . n C 1 109 HIS 109 109 ? ? ? C . n C 1 110 ARG 110 110 ? ? ? C . n C 1 111 PRO 111 111 ? ? ? C . n C 1 112 PRO 112 112 ? ? ? C . n C 1 113 CYS 113 113 ? ? ? C . n C 1 114 ALA 114 114 ? ? ? C . n C 1 115 GLN 115 115 ? ? ? C . n C 1 116 GLU 116 116 ? ? ? C . n C 1 117 ALA 117 117 ? ? ? C . n C 1 118 PRO 118 118 ? ? ? C . n C 1 119 ARG 119 119 ? ? ? C . n C 1 120 ASN 120 120 ? ? ? C . n C 1 121 MET 121 121 ? ? ? C . n C 1 122 VAL 122 122 ? ? ? C . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details 'UCSF CHIMERA 1.12_b41623.' _pdbx_struct_assembly.oligomeric_details 75-meric _pdbx_struct_assembly.oligomeric_count 75 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 ? 1.000000 0.000000 0.000000 0.00000 0.000000 1.000000 0.000000 0.00000 0.000000 0.000000 1.000000 0.00000 2 'point symmetry operation' ? ? 0.740335 0.672238 0.000000 -54.92173 -0.672238 0.740335 0.000000 124.05481 0.000000 -0.000000 1.000000 -117.36000 3 'point symmetry operation' ? ? 0.362926 0.931818 0.000000 -39.23632 -0.931818 0.362926 0.000000 208.85090 0.000000 -0.000000 1.000000 -107.58000 4 'point symmetry operation' ? ? -0.090633 0.995884 0.000000 12.61288 -0.995884 -0.090633 0.000000 277.75714 0.000000 0.000000 1.000000 -97.80000 5 'point symmetry operation' ? ? -0.525175 0.850994 0.000000 89.74686 -0.850994 -0.525175 0.000000 316.31563 0.000000 0.000000 1.000000 -88.02000 6 'point symmetry operation' ? ? -0.849525 0.527549 0.000000 175.98139 -0.527549 -0.849525 0.000000 316.43604 0.000000 0.000000 1.000000 -78.24000 7 'point symmetry operation' ? ? -0.995627 0.093413 0.000000 253.22275 -0.093413 -0.995627 0.000000 278.09310 0.000000 0.000000 1.000000 -68.46000 8 'point symmetry operation' ? ? -0.932828 -0.360322 0.000000 305.26416 0.360322 -0.932828 0.000000 209.33191 0.000000 0.000000 1.000000 -58.68000 9 'point symmetry operation' ? ? -0.674302 -0.738455 0.000000 321.18631 0.738455 -0.674302 0.000000 124.57996 0.000000 0.000000 1.000000 -48.90000 10 'point symmetry operation' ? ? -0.274295 -0.961646 0.000000 297.64840 0.961646 -0.274295 0.000000 41.61987 0.000000 0.000000 1.000000 -39.12000 11 'point symmetry operation' ? ? 0.183265 -0.983064 0.000000 239.58917 0.983064 0.183265 0.000000 -22.14167 -0.000000 0.000000 1.000000 -29.34000 12 'point symmetry operation' ? ? 0.602372 -0.798215 0.000000 159.19059 0.798215 0.602372 0.000000 -53.32622 -0.000000 0.000000 1.000000 -19.56000 13 'point symmetry operation' ? ? 0.895090 -0.445885 0.000000 73.32188 0.445885 0.895090 0.000000 -45.39065 -0.000000 0.000000 1.000000 -9.78000 14 'point symmetry operation' ? ? 0.895090 0.445885 0.000000 -45.39065 -0.445885 0.895090 0.000000 73.32188 0.000000 -0.000000 1.000000 9.78000 15 'point symmetry operation' ? ? 0.602372 0.798215 0.000000 -53.32622 -0.798215 0.602372 0.000000 159.19059 0.000000 -0.000000 1.000000 19.56000 16 'point symmetry operation' ? ? 0.183265 0.983064 0.000000 -22.14167 -0.983064 0.183265 0.000000 239.58917 0.000000 -0.000000 1.000000 29.34000 17 'point symmetry operation' ? ? -0.274295 0.961646 0.000000 41.61987 -0.961646 -0.274295 0.000000 297.64840 0.000000 0.000000 1.000000 39.12000 18 'point symmetry operation' ? ? -0.674302 0.738455 0.000000 124.57996 -0.738455 -0.674302 0.000000 321.18631 0.000000 0.000000 1.000000 48.90000 19 'point symmetry operation' ? ? -0.932828 0.360322 0.000000 209.33191 -0.360322 -0.932828 0.000000 305.26416 0.000000 0.000000 1.000000 58.68000 20 'point symmetry operation' ? ? -0.995627 -0.093413 0.000000 278.09310 0.093413 -0.995627 0.000000 253.22275 0.000000 0.000000 1.000000 68.46000 21 'point symmetry operation' ? ? -0.849525 -0.527549 0.000000 316.43604 0.527549 -0.849525 0.000000 175.98139 0.000000 0.000000 1.000000 78.24000 22 'point symmetry operation' ? ? -0.525175 -0.850994 0.000000 316.31563 0.850994 -0.525175 0.000000 89.74686 0.000000 0.000000 1.000000 88.02000 23 'point symmetry operation' ? ? -0.090633 -0.995884 0.000000 277.75714 0.995884 -0.090633 0.000000 12.61288 0.000000 0.000000 1.000000 97.80000 24 'point symmetry operation' ? ? 0.362926 -0.931818 0.000000 208.85090 0.931818 0.362926 0.000000 -39.23632 -0.000000 0.000000 1.000000 107.58000 25 'point symmetry operation' ? ? 0.740335 -0.672238 0.000000 124.05481 0.672238 0.740335 0.000000 -54.92173 -0.000000 0.000000 1.000000 117.36000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2020-02-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _em_3d_fitting.entry_id 6TH3 _em_3d_fitting.id 1 _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria 'Correlation coefficient' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.details ? _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.pdb_entry_id 2KKC # _em_3d_reconstruction.entry_id 6TH3 _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 51679 _em_3d_reconstruction.resolution 4.0 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? # _em_buffer.id 1 _em_buffer.details '50 mM TRIS (pH 7.5), 100 mM NaCl, 4 mM DTT' _em_buffer.pH 7.5 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'p62-PB1 domain filament (L-type)' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 6TH3 _em_image_scans.id 1 _em_image_scans.dimension_height ? _em_image_scans.dimension_width ? _em_image_scans.frames_per_image 40 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image ? _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 6TH3 _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max ? _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_max 2500 _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_magnification ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature 283 _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity 100 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.entry_id 6TH3 _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 6TH3 _em_experiment.id 1 _em_experiment.aggregation_state FILAMENT _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 22 ? ? 57.15 75.28 2 1 PRO A 31 ? ? -72.92 -169.85 3 1 ALA A 39 ? ? -154.71 86.82 4 1 LYS A 91 ? ? -92.87 -65.42 5 1 ASP A 92 ? ? -105.35 -67.31 6 1 ASP A 93 ? ? -145.67 17.00 7 1 ARG B 22 ? ? 57.10 75.28 8 1 PRO B 31 ? ? -72.93 -169.82 9 1 ALA B 39 ? ? -154.75 86.83 10 1 LYS B 91 ? ? -92.85 -65.43 11 1 ASP B 92 ? ? -105.32 -67.32 12 1 ASP B 93 ? ? -145.67 16.93 13 1 ARG C 22 ? ? 57.08 75.27 14 1 PRO C 31 ? ? -73.00 -169.86 15 1 ALA C 39 ? ? -154.79 86.79 16 1 LYS C 91 ? ? -92.81 -65.42 17 1 ASP C 92 ? ? -105.35 -67.28 18 1 ASP C 93 ? ? -145.72 16.95 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ARG 106 ? A ARG 106 3 1 Y 1 A ARG 107 ? A ARG 107 4 1 Y 1 A ASP 108 ? A ASP 108 5 1 Y 1 A HIS 109 ? A HIS 109 6 1 Y 1 A ARG 110 ? A ARG 110 7 1 Y 1 A PRO 111 ? A PRO 111 8 1 Y 1 A PRO 112 ? A PRO 112 9 1 Y 1 A CYS 113 ? A CYS 113 10 1 Y 1 A ALA 114 ? A ALA 114 11 1 Y 1 A GLN 115 ? A GLN 115 12 1 Y 1 A GLU 116 ? A GLU 116 13 1 Y 1 A ALA 117 ? A ALA 117 14 1 Y 1 A PRO 118 ? A PRO 118 15 1 Y 1 A ARG 119 ? A ARG 119 16 1 Y 1 A ASN 120 ? A ASN 120 17 1 Y 1 A MET 121 ? A MET 121 18 1 Y 1 A VAL 122 ? A VAL 122 19 1 Y 1 B MET 1 ? B MET 1 20 1 Y 1 B ARG 106 ? B ARG 106 21 1 Y 1 B ARG 107 ? B ARG 107 22 1 Y 1 B ASP 108 ? B ASP 108 23 1 Y 1 B HIS 109 ? B HIS 109 24 1 Y 1 B ARG 110 ? B ARG 110 25 1 Y 1 B PRO 111 ? B PRO 111 26 1 Y 1 B PRO 112 ? B PRO 112 27 1 Y 1 B CYS 113 ? B CYS 113 28 1 Y 1 B ALA 114 ? B ALA 114 29 1 Y 1 B GLN 115 ? B GLN 115 30 1 Y 1 B GLU 116 ? B GLU 116 31 1 Y 1 B ALA 117 ? B ALA 117 32 1 Y 1 B PRO 118 ? B PRO 118 33 1 Y 1 B ARG 119 ? B ARG 119 34 1 Y 1 B ASN 120 ? B ASN 120 35 1 Y 1 B MET 121 ? B MET 121 36 1 Y 1 B VAL 122 ? B VAL 122 37 1 Y 1 C MET 1 ? C MET 1 38 1 Y 1 C ARG 106 ? C ARG 106 39 1 Y 1 C ARG 107 ? C ARG 107 40 1 Y 1 C ASP 108 ? C ASP 108 41 1 Y 1 C HIS 109 ? C HIS 109 42 1 Y 1 C ARG 110 ? C ARG 110 43 1 Y 1 C PRO 111 ? C PRO 111 44 1 Y 1 C PRO 112 ? C PRO 112 45 1 Y 1 C CYS 113 ? C CYS 113 46 1 Y 1 C ALA 114 ? C ALA 114 47 1 Y 1 C GLN 115 ? C GLN 115 48 1 Y 1 C GLU 116 ? C GLU 116 49 1 Y 1 C ALA 117 ? C ALA 117 50 1 Y 1 C PRO 118 ? C PRO 118 51 1 Y 1 C ARG 119 ? C ARG 119 52 1 Y 1 C ASN 120 ? C ASN 120 53 1 Y 1 C MET 121 ? C MET 121 54 1 Y 1 C VAL 122 ? C VAL 122 # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 1 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit -26.48 _em_helical_entity.axial_rise_per_subunit 9.78 _em_helical_entity.axial_symmetry C1 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 40 _em_image_recording.average_exposure_time ? _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 2277 # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' ? SPRING ? 1 ? ? 2 'IMAGE ACQUISITION' ? SerialEM ? ? ? 1 3 MASKING ? ? ? ? ? ? 4 'CTF CORRECTION' ? Gctf ? 1 ? ? 5 'LAYERLINE INDEXING' ? ? ? ? ? ? 6 'DIFFRACTION INDEXING' ? ? ? ? ? ? 7 'MODEL FITTING' ? PHENIX ? ? 1 ? 8 OTHER ? ? ? ? ? ? 9 'MODEL REFINEMENT' ? PHENIX ? ? 1 ? 10 'INITIAL EULER ASSIGNMENT' ? RELION 3 1 ? ? 11 'FINAL EULER ASSIGNMENT' ? RELION 3 1 ? ? 12 CLASSIFICATION ? RELION 3 1 ? ? 13 RECONSTRUCTION ? RELION 3 1 ? ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'European Commission' ? PIEF-GA-2012-331285 1 'European Commission' ? PCOFUND-GA-2008-229597 2 'German Research Foundation' Germany EXC1074 3 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #