HEADER VIRAL PROTEIN 22-NOV-19 6TIT TITLE VSV G_440 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOPROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RECOMBINANT VESICULAR STOMATITIS INDIANA VIRUS SOURCE 3 RVSV-G/GFP; SOURCE 4 ORGANISM_TAXID: 582817; SOURCE 5 EXPRESSION_SYSTEM: INSECT CELL EXPRESSION VECTOR PTIE1; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 266783 KEYWDS VIRAL FUSION PROTEIN, VSV, VESICULAR STOMATITIS VIRUS, GLYCOPROTEIN, KEYWDS 2 ECTODOMAIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.A.ALBERTINI,L.BELOT,A.ABOUHAMDAN,Y.GAUDIN REVDAT 3 24-JAN-24 6TIT 1 REMARK REVDAT 2 17-MAR-21 6TIT 1 JRNL REVDAT 1 02-SEP-20 6TIT 0 JRNL AUTH F.BEILSTEIN,A.ABOU HAMDAN,H.RAUX,L.BELOT,M.OULDALI, JRNL AUTH 2 A.A.ALBERTINI,Y.GAUDIN JRNL TITL IDENTIFICATION OF A PH-SENSITIVE SWITCH IN VSV-G AND A JRNL TITL 2 CRYSTAL STRUCTURE OF THE G PRE-FUSION STATE HIGHLIGHT THE JRNL TITL 3 VSV-G STRUCTURAL TRANSITION PATHWAY. JRNL REF CELL REP V. 32 08042 2020 JRNL REFN ESSN 2211-1247 JRNL PMID 32814045 JRNL DOI 10.1016/J.CELREP.2020.108042 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17_3644 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 52860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 2600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.8200 - 5.5300 1.00 2935 159 0.2319 0.2748 REMARK 3 2 5.5300 - 4.3900 1.00 2772 133 0.1622 0.2141 REMARK 3 3 4.3900 - 3.8400 1.00 2713 137 0.1635 0.2078 REMARK 3 4 3.8400 - 3.4900 1.00 2690 139 0.1831 0.1987 REMARK 3 5 3.4900 - 3.2400 1.00 2698 120 0.1933 0.2166 REMARK 3 6 3.2400 - 3.0500 1.00 2641 146 0.1978 0.2202 REMARK 3 7 3.0500 - 2.8900 1.00 2646 141 0.2084 0.2376 REMARK 3 8 2.8900 - 2.7700 1.00 2653 131 0.2174 0.2961 REMARK 3 9 2.7700 - 2.6600 1.00 2628 125 0.2262 0.2780 REMARK 3 10 2.6600 - 2.5700 1.00 2633 130 0.2179 0.2179 REMARK 3 11 2.5700 - 2.4900 1.00 2631 153 0.2177 0.2569 REMARK 3 12 2.4900 - 2.4200 1.00 2572 167 0.2335 0.2479 REMARK 3 13 2.4200 - 2.3500 1.00 2634 126 0.2355 0.2322 REMARK 3 14 2.3500 - 2.3000 1.00 2618 131 0.2519 0.2991 REMARK 3 15 2.3000 - 2.2400 1.00 2616 120 0.2633 0.3430 REMARK 3 16 2.2400 - 2.2000 1.00 2617 131 0.2690 0.2855 REMARK 3 17 2.2000 - 2.1500 1.00 2597 136 0.2923 0.2703 REMARK 3 18 2.1500 - 2.1100 1.00 2582 151 0.3020 0.3102 REMARK 3 19 2.1100 - 2.0700 0.92 2384 124 0.3420 0.3621 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TIT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1292105380. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM30A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 52870 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 44.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.2700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5I2S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8% PEG8000, 0.15M CALCIUM ACETATE, REMARK 280 0.15M HEPES PH7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 806 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER A 19 O HOH A 601 1.31 REMARK 500 O LEU A 195 H LEU A 198 1.54 REMARK 500 HH TYR A 281 O HOH A 602 1.55 REMARK 500 O HOH A 618 O HOH A 742 1.93 REMARK 500 OG SER A 19 O HOH A 601 1.99 REMARK 500 O HOH A 727 O HOH A 768 2.06 REMARK 500 OH TYR A 281 O HOH A 602 2.08 REMARK 500 O HOH A 651 O HOH A 746 2.09 REMARK 500 OE1 GLN A 285 O HOH A 603 2.10 REMARK 500 OD2 ASP A 268 O HOH A 604 2.14 REMARK 500 O HOH A 767 O HOH A 803 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 230 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 230 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 LEU A 392 CB - CG - CD2 ANGL. DEV. = 10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 9 151.48 -49.67 REMARK 500 ASN A 20 -1.10 71.26 REMARK 500 ASN A 34 -120.53 43.06 REMARK 500 LYS A 47 -25.49 -145.59 REMARK 500 ASP A 69 -103.92 -79.85 REMARK 500 PHE A 70 88.43 80.81 REMARK 500 TRP A 72 -100.93 28.80 REMARK 500 PRO A 111 155.02 -42.25 REMARK 500 TYR A 116 -87.99 -113.10 REMARK 500 THR A 118 -116.98 -129.09 REMARK 500 ASP A 121 100.47 118.88 REMARK 500 ASN A 150 14.87 57.78 REMARK 500 ASP A 170 50.91 -149.96 REMARK 500 SER A 196 -17.27 -43.08 REMARK 500 ASN A 320 -130.47 64.38 REMARK 500 TYR A 363 104.94 -160.21 REMARK 500 GLU A 364 75.38 29.52 REMARK 500 ASP A 365 -2.77 68.04 REMARK 500 VAL A 366 -169.63 -126.24 REMARK 500 SER A 400 146.68 168.93 REMARK 500 ASP A 419 103.82 -39.02 REMARK 500 ASP A 420 -15.03 110.75 REMARK 500 THR A 428 -156.11 -94.31 REMARK 500 LEU A 430 55.62 -152.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR A 116 ALA A 117 -149.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 502 REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 NAG A 501 REMARK 615 NAG A 502 REMARK 615 NAG A 503 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 510 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ILE A 37 O REMARK 620 2 PHE A 188 O 72.6 REMARK 620 3 SER A 190 OG 107.1 138.7 REMARK 620 N 1 2 DBREF 6TIT A 1 432 UNP B7UCZ5 B7UCZ5_9RHAB 17 448 SEQRES 1 A 432 LYS PHE THR ILE VAL PHE PRO HIS ASN GLN LYS GLY ASN SEQRES 2 A 432 TRP LYS ASN VAL PRO SER ASN TYR HIS TYR CYS PRO SER SEQRES 3 A 432 SER SER ASP LEU ASN TRP HIS ASN ASP LEU ILE GLY THR SEQRES 4 A 432 ALA LEU GLN VAL LYS MET PRO LYS SER HIS LYS ALA ILE SEQRES 5 A 432 GLN ALA ASP GLY TRP MET CYS HIS ALA SER LYS TRP VAL SEQRES 6 A 432 THR THR CYS ASP PHE ARG TRP TYR GLY PRO LYS TYR ILE SEQRES 7 A 432 THR HIS SER ILE ARG SER PHE THR PRO SER VAL GLU GLN SEQRES 8 A 432 CYS LYS GLU SER ILE GLU GLN THR LYS GLN GLY THR TRP SEQRES 9 A 432 LEU ASN PRO GLY PHE PRO PRO GLN SER CYS GLY TYR ALA SEQRES 10 A 432 THR VAL THR ASP ALA GLU ALA VAL ILE VAL GLN VAL THR SEQRES 11 A 432 PRO HIS HIS VAL LEU VAL ASP GLU TYR THR GLY GLU TRP SEQRES 12 A 432 VAL ASP SER GLN PHE ILE ASN GLY LYS CYS SER ASN TYR SEQRES 13 A 432 ILE CYS PRO THR VAL HIS ASN SER THR THR TRP HIS SER SEQRES 14 A 432 ASP TYR LYS VAL LYS GLY LEU CYS ASP SER ASN LEU ILE SEQRES 15 A 432 SER MET ASP ILE THR PHE PHE SER GLU ASP GLY GLU LEU SEQRES 16 A 432 SER SER LEU GLY LYS GLU GLY THR GLY PHE ARG SER ASN SEQRES 17 A 432 TYR PHE ALA TYR GLU THR GLY GLY LYS ALA CYS LYS MET SEQRES 18 A 432 GLN TYR CYS LYS HIS TRP GLY VAL ARG LEU PRO SER GLY SEQRES 19 A 432 VAL TRP PHE GLU MET ALA ASP LYS ASP LEU PHE ALA ALA SEQRES 20 A 432 ALA ARG PHE PRO GLU CYS PRO GLU GLY SER SER ILE SER SEQRES 21 A 432 ALA PRO SER GLN THR SER VAL ASP VAL SER LEU ILE GLN SEQRES 22 A 432 ASP VAL GLU ARG ILE LEU ASP TYR SER LEU CYS GLN GLU SEQRES 23 A 432 THR TRP SER LYS ILE ARG ALA GLY LEU PRO ILE SER PRO SEQRES 24 A 432 VAL ASP LEU SER TYR LEU ALA PRO LYS ASN PRO GLY THR SEQRES 25 A 432 GLY PRO ALA PHE THR ILE ILE ASN GLY THR LEU LYS TYR SEQRES 26 A 432 PHE GLU THR ARG TYR ILE ARG VAL ASP ILE ALA ALA PRO SEQRES 27 A 432 ILE LEU SER ARG MET VAL GLY MET ILE SER GLY THR THR SEQRES 28 A 432 THR GLU ARG GLU LEU TRP ASP ASP TRP ALA PRO TYR GLU SEQRES 29 A 432 ASP VAL GLU ILE GLY PRO ASN GLY VAL LEU ARG THR SER SEQRES 30 A 432 SER GLY TYR LYS PHE PRO LEU TYR MET ILE GLY HIS GLY SEQRES 31 A 432 MET LEU ASP SER ASP LEU HIS LEU SER SER LYS ALA GLN SEQRES 32 A 432 VAL PHE GLU HIS PRO HIS ILE GLN ASP ALA ALA SER GLN SEQRES 33 A 432 LEU PRO ASP ASP GLU SER LEU PHE PHE GLY ASP THR GLY SEQRES 34 A 432 LEU SER LYS HET NAG A 501 28 HET NAG A 502 28 HET NAG A 503 28 HET ACT A 504 7 HET PEG A 505 17 HET GOL A 506 9 HET GOL A 507 9 HET GOL A 508 9 HET GOL A 509 9 HET CA A 510 1 HET CA A 511 1 HET CA A 512 1 HET CA A 513 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM ACT ACETATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 3(C8 H15 N O6) FORMUL 5 ACT C2 H3 O2 1- FORMUL 6 PEG C4 H10 O3 FORMUL 7 GOL 4(C3 H8 O3) FORMUL 11 CA 4(CA 2+) FORMUL 15 HOH *219(H2 O) HELIX 1 AA1 LYS A 47 ILE A 52 5 6 HELIX 2 AA2 SER A 88 GLY A 102 1 15 HELIX 3 AA3 PHE A 148 ASN A 150 5 3 HELIX 4 AA4 GLU A 194 LEU A 198 5 5 HELIX 5 AA5 ASP A 241 ARG A 249 1 9 HELIX 6 AA6 ASP A 268 ILE A 272 5 5 HELIX 7 AA7 GLN A 273 ALA A 293 1 21 HELIX 8 AA8 SER A 298 TYR A 304 1 7 HELIX 9 AA9 PRO A 370 GLY A 372 5 3 HELIX 10 AB1 PHE A 382 ILE A 387 1 6 HELIX 11 AB2 ASP A 393 LEU A 398 5 6 HELIX 12 AB3 HIS A 409 GLN A 416 1 8 SHEET 1 AA1 3 PHE A 2 PRO A 7 0 SHEET 2 AA1 3 THR A 322 ILE A 335 -1 O VAL A 333 N ILE A 4 SHEET 3 AA1 3 GLY A 311 ILE A 319 -1 N GLY A 313 O THR A 328 SHEET 1 AA2 4 LYS A 15 ASN A 16 0 SHEET 2 AA2 4 THR A 322 ILE A 335 -1 O TYR A 325 N LYS A 15 SHEET 3 AA2 4 VAL A 344 ILE A 347 -1 O MET A 346 N ASP A 334 SHEET 4 AA2 4 GLU A 353 GLU A 355 -1 O ARG A 354 N GLY A 345 SHEET 1 AA3 7 GLU A 213 THR A 214 0 SHEET 2 AA3 7 THR A 203 ARG A 206 -1 N PHE A 205 O GLU A 213 SHEET 3 AA3 7 ILE A 182 SER A 190 -1 N THR A 187 O ARG A 206 SHEET 4 AA3 7 ILE A 37 MET A 45 -1 N VAL A 43 O MET A 184 SHEET 5 AA3 7 TRP A 236 MET A 239 -1 O GLU A 238 N LYS A 44 SHEET 6 AA3 7 HIS A 226 ARG A 230 -1 N VAL A 229 O PHE A 237 SHEET 7 AA3 7 CYS A 219 TYR A 223 -1 N CYS A 219 O ARG A 230 SHEET 1 AA4 4 ALA A 122 PRO A 131 0 SHEET 2 AA4 4 GLY A 56 CYS A 68 -1 N THR A 66 O ALA A 122 SHEET 3 AA4 4 THR A 166 SER A 169 -1 O THR A 166 N CYS A 59 SHEET 4 AA4 4 ILE A 157 PRO A 159 -1 N CYS A 158 O TRP A 167 SHEET 1 AA5 5 ALA A 122 PRO A 131 0 SHEET 2 AA5 5 GLY A 56 CYS A 68 -1 N THR A 66 O ALA A 122 SHEET 3 AA5 5 ILE A 78 SER A 84 -1 O ARG A 83 N LYS A 63 SHEET 4 AA5 5 LEU A 423 PHE A 425 1 O PHE A 424 N ILE A 82 SHEET 5 AA5 5 THR A 428 SER A 431 -1 O SER A 431 N LEU A 423 SHEET 1 AA6 3 LEU A 135 VAL A 136 0 SHEET 2 AA6 3 TRP A 143 VAL A 144 -1 O VAL A 144 N LEU A 135 SHEET 3 AA6 3 LYS A 152 CYS A 153 -1 O CYS A 153 N TRP A 143 SHEET 1 AA7 5 ILE A 339 LEU A 340 0 SHEET 2 AA7 5 GLY A 379 LYS A 381 -1 O TYR A 380 N LEU A 340 SHEET 3 AA7 5 LEU A 374 THR A 376 -1 N LEU A 374 O LYS A 381 SHEET 4 AA7 5 VAL A 366 ILE A 368 -1 N GLU A 367 O ARG A 375 SHEET 5 AA7 5 ALA A 361 TYR A 363 -1 N TYR A 363 O VAL A 366 SSBOND 1 CYS A 24 CYS A 284 1555 1555 2.11 SSBOND 2 CYS A 59 CYS A 92 1555 1555 2.09 SSBOND 3 CYS A 68 CYS A 114 1555 1555 2.04 SSBOND 4 CYS A 153 CYS A 158 1555 1555 2.09 SSBOND 5 CYS A 177 CYS A 224 1555 1555 2.08 SSBOND 6 CYS A 219 CYS A 253 1555 1555 2.02 LINK ND2 ASN A 163 C1 NAG A 501 1555 1555 1.44 LINK ND2 ASN A 320 C1 NAG A 503 1555 1555 1.44 LINK O ILE A 37 CA CA A 510 1555 1555 3.02 LINK O PHE A 188 CA CA A 510 1555 1555 3.08 LINK OG SER A 190 CA CA A 510 1555 1555 2.23 LINK O TRP A 227 CA CA A 513 1555 1555 3.10 LINK CA CA A 511 O HOH A 801 1555 1555 3.12 LINK CA CA A 512 O HOH A 772 1555 1555 3.09 CRYST1 120.950 120.950 200.320 90.00 90.00 120.00 P 6 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008268 0.004773 0.000000 0.00000 SCALE2 0.000000 0.009547 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004992 0.00000