HEADER BLOOD CLOTTING 28-NOV-19 6TKJ TITLE TSETSE THROMBIN INHIBITOR IN COMPLEX WITH HUMAN ALPHA-THROMBIN - TITLE 2 TETRAGONAL FORM AT 7KEV COMPND MOL_ID: 1; COMPND 2 MOLECULE: THROMBIN LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 SYNONYM: COAGULATION FACTOR II; COMPND 5 EC: 3.4.21.5; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: THROMBIN HEAVY CHAIN; COMPND 8 CHAIN: H; COMPND 9 SYNONYM: COAGULATION FACTOR II; COMPND 10 EC: 3.4.21.5; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: TSETSE THROMBIN INHIBITOR; COMPND 13 CHAIN: I; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: GLOSSINA MORSITANS MORSITANS; SOURCE 12 ORGANISM_TAXID: 37546 KEYWDS ANTICOAGULANT TYROSINE SULFATION POSTTRANSLATIONAL MODIFICATION KEYWDS 2 COMPLEX, BLOOD CLOTTING EXPDTA X-RAY DIFFRACTION AUTHOR B.M.CALISTO,J.RIPOLL-ROZADA,D.DE SANCTIS,P.J.B.PEREIRA REVDAT 3 24-JAN-24 6TKJ 1 REMARK REVDAT 2 03-FEB-21 6TKJ 1 JRNL REVDAT 1 04-NOV-20 6TKJ 0 JRNL AUTH B.M.CALISTO,J.RIPOLL-ROZADA,L.J.DOWMAN,C.FRANCK,S.M.AGTEN, JRNL AUTH 2 B.L.PARKER,R.C.VELOSO,N.VALE,P.GOMES,D.DE SANCTIS,R.J.PAYNE, JRNL AUTH 3 P.J.B.PEREIRA JRNL TITL SULFOTYROSINE-MEDIATED RECOGNITION OF HUMAN THROMBIN BY A JRNL TITL 2 TSETSE FLY ANTICOAGULANT MIMICS PHYSIOLOGICAL SUBSTRATES. JRNL REF CELL CHEM BIOL V. 28 26 2021 JRNL REFN ESSN 2451-9456 JRNL PMID 33096052 JRNL DOI 10.1016/J.CHEMBIOL.2020.10.002 REMARK 2 REMARK 2 RESOLUTION. 2.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 10647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.210 REMARK 3 FREE R VALUE TEST SET COUNT : 555 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.5600 - 4.4600 1.00 2650 155 0.1578 0.2353 REMARK 3 2 4.4600 - 3.5400 1.00 2514 145 0.1518 0.2227 REMARK 3 3 3.5400 - 3.0900 1.00 2496 137 0.2081 0.2772 REMARK 3 4 3.0900 - 2.8100 0.98 2432 118 0.2417 0.3256 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.306 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.436 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 77.29 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2479 REMARK 3 ANGLE : 1.339 3349 REMARK 3 CHIRALITY : 0.073 349 REMARK 3 PLANARITY : 0.008 431 REMARK 3 DIHEDRAL : 23.088 1498 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 288 THROUGH 292 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3020 -15.1160 4.3193 REMARK 3 T TENSOR REMARK 3 T11: 1.5489 T22: 1.1028 REMARK 3 T33: 0.9250 T12: 0.1817 REMARK 3 T13: 0.3480 T23: 0.1314 REMARK 3 L TENSOR REMARK 3 L11: 0.6308 L22: 0.6036 REMARK 3 L33: 0.0084 L12: 0.0233 REMARK 3 L13: 0.0983 L23: -0.0288 REMARK 3 S TENSOR REMARK 3 S11: -2.1038 S12: 1.2844 S13: -0.5791 REMARK 3 S21: -0.9903 S22: 0.6309 S23: -0.5183 REMARK 3 S31: 0.2116 S32: -1.7312 S33: 0.2702 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 293 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2045 -13.3331 14.8336 REMARK 3 T TENSOR REMARK 3 T11: 0.8988 T22: 0.6249 REMARK 3 T33: 1.1707 T12: 0.2092 REMARK 3 T13: 0.2834 T23: 0.1357 REMARK 3 L TENSOR REMARK 3 L11: 3.8941 L22: 4.6087 REMARK 3 L33: 0.7606 L12: -1.2806 REMARK 3 L13: -0.6228 L23: -1.2402 REMARK 3 S TENSOR REMARK 3 S11: -0.0278 S12: -0.2213 S13: 0.5772 REMARK 3 S21: -0.3119 S22: -0.7087 S23: -0.9528 REMARK 3 S31: -0.2714 S32: 0.4691 S33: 0.1655 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 298 THROUGH 302 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3248 -9.1515 20.0575 REMARK 3 T TENSOR REMARK 3 T11: 1.1193 T22: 0.8408 REMARK 3 T33: 0.8889 T12: 0.2812 REMARK 3 T13: 0.1756 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 6.5774 L22: 6.7158 REMARK 3 L33: 5.2069 L12: 0.3599 REMARK 3 L13: -3.3495 L23: -2.6626 REMARK 3 S TENSOR REMARK 3 S11: 0.2428 S12: -1.4351 S13: 0.8409 REMARK 3 S21: 0.7614 S22: -0.7075 S23: -0.0857 REMARK 3 S31: -1.5965 S32: -0.0029 S33: 0.0451 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 303 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.7717 -12.1660 25.4339 REMARK 3 T TENSOR REMARK 3 T11: 1.0435 T22: 0.8194 REMARK 3 T33: 0.9164 T12: -0.1438 REMARK 3 T13: 0.1253 T23: -0.0918 REMARK 3 L TENSOR REMARK 3 L11: 3.8840 L22: 7.2445 REMARK 3 L33: 0.3574 L12: -4.1110 REMARK 3 L13: 0.7343 L23: -0.1499 REMARK 3 S TENSOR REMARK 3 S11: -0.1215 S12: -0.0367 S13: 0.5182 REMARK 3 S21: 0.4193 S22: 1.1150 S23: -1.2418 REMARK 3 S31: 0.1661 S32: -0.2131 S33: 0.1776 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 309 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7142 -17.3393 21.8454 REMARK 3 T TENSOR REMARK 3 T11: 0.6373 T22: 0.8132 REMARK 3 T33: 0.4918 T12: -0.1225 REMARK 3 T13: 0.0718 T23: 0.0526 REMARK 3 L TENSOR REMARK 3 L11: 5.6619 L22: 3.9430 REMARK 3 L33: 2.1780 L12: -2.4317 REMARK 3 L13: -1.0191 L23: 1.5922 REMARK 3 S TENSOR REMARK 3 S11: 1.5377 S12: -1.9334 S13: 0.1736 REMARK 3 S21: 0.2343 S22: -0.7563 S23: 1.7439 REMARK 3 S31: -1.4991 S32: 0.9562 S33: 0.0587 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 321 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6613 -22.6260 25.9719 REMARK 3 T TENSOR REMARK 3 T11: 0.7732 T22: 0.6566 REMARK 3 T33: 0.7768 T12: -0.0184 REMARK 3 T13: 0.2035 T23: 0.0258 REMARK 3 L TENSOR REMARK 3 L11: 3.4196 L22: 5.1874 REMARK 3 L33: 4.1753 L12: -0.2264 REMARK 3 L13: -0.6052 L23: -0.0382 REMARK 3 S TENSOR REMARK 3 S11: 0.1940 S12: -1.0470 S13: -0.3494 REMARK 3 S21: 0.9661 S22: 0.3905 S23: 0.2908 REMARK 3 S31: -0.6250 S32: 0.1440 S33: -0.0139 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 335 THROUGH 356 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3274 -30.8738 16.5123 REMARK 3 T TENSOR REMARK 3 T11: 0.6021 T22: 0.8009 REMARK 3 T33: 0.7884 T12: 0.1263 REMARK 3 T13: 0.0632 T23: 0.0722 REMARK 3 L TENSOR REMARK 3 L11: 4.6033 L22: 4.7472 REMARK 3 L33: 2.7942 L12: 1.4796 REMARK 3 L13: -0.8466 L23: -0.7227 REMARK 3 S TENSOR REMARK 3 S11: 0.3101 S12: 0.0247 S13: -0.2894 REMARK 3 S21: 0.3616 S22: -0.3692 S23: 0.1510 REMARK 3 S31: 0.2511 S32: -0.0393 S33: -0.1297 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 357 THROUGH 396 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3877 -32.9754 17.1443 REMARK 3 T TENSOR REMARK 3 T11: 0.6654 T22: 0.7246 REMARK 3 T33: 0.8520 T12: 0.0224 REMARK 3 T13: 0.0199 T23: 0.0719 REMARK 3 L TENSOR REMARK 3 L11: 3.4219 L22: 4.8691 REMARK 3 L33: 1.6265 L12: -0.0735 REMARK 3 L13: -0.1808 L23: 1.2672 REMARK 3 S TENSOR REMARK 3 S11: -0.0420 S12: -0.1381 S13: 0.1337 REMARK 3 S21: 0.2531 S22: 0.1082 S23: 0.8369 REMARK 3 S31: 0.0542 S32: -0.2932 S33: -0.0352 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 397 THROUGH 420 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.4110 -38.3427 6.9039 REMARK 3 T TENSOR REMARK 3 T11: 0.6209 T22: 0.5965 REMARK 3 T33: 0.5201 T12: 0.0362 REMARK 3 T13: 0.0014 T23: 0.0430 REMARK 3 L TENSOR REMARK 3 L11: 3.7208 L22: 3.9766 REMARK 3 L33: 1.3880 L12: 0.6631 REMARK 3 L13: -1.3664 L23: 0.1406 REMARK 3 S TENSOR REMARK 3 S11: 0.0576 S12: 0.7868 S13: 0.1776 REMARK 3 S21: -0.5773 S22: 0.0132 S23: 0.3532 REMARK 3 S31: 0.0794 S32: -0.4723 S33: -0.0641 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 421 THROUGH 460 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9840 -22.2681 11.6399 REMARK 3 T TENSOR REMARK 3 T11: 0.5389 T22: 0.4709 REMARK 3 T33: 0.5970 T12: 0.0635 REMARK 3 T13: 0.0330 T23: 0.0805 REMARK 3 L TENSOR REMARK 3 L11: 4.5347 L22: 3.4047 REMARK 3 L33: 1.9279 L12: 1.0601 REMARK 3 L13: 0.1006 L23: 0.1813 REMARK 3 S TENSOR REMARK 3 S11: 0.0583 S12: 0.1029 S13: 1.0249 REMARK 3 S21: -0.1769 S22: -0.0245 S23: 0.3245 REMARK 3 S31: -0.4433 S32: -0.2405 S33: -0.0828 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 461 THROUGH 489 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9962 -31.0757 26.7720 REMARK 3 T TENSOR REMARK 3 T11: 0.6210 T22: 0.7799 REMARK 3 T33: 0.6912 T12: -0.0538 REMARK 3 T13: -0.0511 T23: 0.2033 REMARK 3 L TENSOR REMARK 3 L11: 3.3920 L22: 3.2885 REMARK 3 L33: 2.3786 L12: 0.1486 REMARK 3 L13: -2.2652 L23: -0.2359 REMARK 3 S TENSOR REMARK 3 S11: -0.2517 S12: -0.9120 S13: -0.2363 REMARK 3 S21: 0.3516 S22: 0.1983 S23: 0.3603 REMARK 3 S31: 0.5250 S32: -0.0328 S33: -0.0182 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 490 THROUGH 504 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3618 -42.3057 12.7120 REMARK 3 T TENSOR REMARK 3 T11: 0.7222 T22: 0.7670 REMARK 3 T33: 0.7724 T12: 0.1214 REMARK 3 T13: 0.1093 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 5.6787 L22: 4.1197 REMARK 3 L33: 2.4048 L12: 2.4248 REMARK 3 L13: 1.3856 L23: 1.2350 REMARK 3 S TENSOR REMARK 3 S11: -0.0976 S12: 0.3497 S13: -0.5744 REMARK 3 S21: -0.2142 S22: 0.3371 S23: -1.0806 REMARK 3 S31: 0.5083 S32: 1.0151 S33: -0.0047 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 505 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.4308 -34.0442 23.6123 REMARK 3 T TENSOR REMARK 3 T11: 0.5688 T22: 0.7612 REMARK 3 T33: 0.5529 T12: -0.0197 REMARK 3 T13: -0.0103 T23: 0.1911 REMARK 3 L TENSOR REMARK 3 L11: 4.0931 L22: 3.2307 REMARK 3 L33: 4.8253 L12: 0.7070 REMARK 3 L13: 0.6591 L23: 0.9740 REMARK 3 S TENSOR REMARK 3 S11: 0.0822 S12: -0.9157 S13: -0.7395 REMARK 3 S21: 0.1348 S22: -0.1454 S23: -0.3652 REMARK 3 S31: 0.8112 S32: 0.0860 S33: -0.0619 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 528 THROUGH 557 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1818 -28.3256 17.2894 REMARK 3 T TENSOR REMARK 3 T11: 0.5554 T22: 0.6270 REMARK 3 T33: 0.7184 T12: 0.0153 REMARK 3 T13: -0.0239 T23: 0.0199 REMARK 3 L TENSOR REMARK 3 L11: 3.5516 L22: 2.7323 REMARK 3 L33: 2.2803 L12: -0.4066 REMARK 3 L13: -0.3638 L23: 0.2375 REMARK 3 S TENSOR REMARK 3 S11: -0.0198 S12: -0.3160 S13: 0.0879 REMARK 3 S21: 0.8483 S22: 0.0057 S23: -0.5413 REMARK 3 S31: -0.2336 S32: 0.0660 S33: -0.0687 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 558 THROUGH 577 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0010 -30.6865 2.8489 REMARK 3 T TENSOR REMARK 3 T11: 0.6715 T22: 0.6050 REMARK 3 T33: 0.3712 T12: 0.0635 REMARK 3 T13: -0.0082 T23: 0.0497 REMARK 3 L TENSOR REMARK 3 L11: 4.5352 L22: 4.1493 REMARK 3 L33: 4.2216 L12: -0.2356 REMARK 3 L13: 0.3630 L23: -1.4465 REMARK 3 S TENSOR REMARK 3 S11: 0.2367 S12: 0.9190 S13: -0.0725 REMARK 3 S21: -0.7504 S22: 0.0373 S23: -0.1705 REMARK 3 S31: 0.9105 S32: 0.6612 S33: -0.0506 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'I' AND (RESID 1 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0145 -35.9099 6.7148 REMARK 3 T TENSOR REMARK 3 T11: 0.6189 T22: 0.9265 REMARK 3 T33: 0.8445 T12: 0.0852 REMARK 3 T13: 0.1663 T23: -0.0969 REMARK 3 L TENSOR REMARK 3 L11: 1.8860 L22: 2.6528 REMARK 3 L33: 3.0444 L12: 1.3240 REMARK 3 L13: 0.2096 L23: -1.1372 REMARK 3 S TENSOR REMARK 3 S11: -0.6057 S12: 0.2056 S13: -0.1498 REMARK 3 S21: -0.6611 S22: 0.0140 S23: -0.7194 REMARK 3 S31: -0.2933 S32: -1.0227 S33: 0.2760 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TKJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-NOV-19. REMARK 100 THE DEPOSITION ID IS D_1292105610. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.771 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10690 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.810 REMARK 200 RESOLUTION RANGE LOW (A) : 81.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 24.30 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 23.40 REMARK 200 R MERGE FOR SHELL (I) : 1.13800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3U69 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M SODIUM CACODYLATE PH 6.5, 0.01 REMARK 280 M MAGNESIUM SULFATE, 2 M AMMONIUM SULFATE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.25600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 57.48850 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 57.48850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.62800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 57.48850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 57.48850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.88400 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 57.48850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 57.48850 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 15.62800 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 57.48850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 57.48850 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.88400 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 31.25600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5150 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR L 285 REMARK 465 PHE L 286 REMARK 465 GLY L 287 REMARK 465 GLY L 319 REMARK 465 ARG L 320 REMARK 465 THR H 467 REMARK 465 TRP H 468 REMARK 465 THR H 469 REMARK 465 ALA H 470 REMARK 465 ASN H 471 REMARK 465 VAL H 472 REMARK 465 GLY H 473 REMARK 465 LYS H 474 REMARK 465 GLY H 578 REMARK 465 GLU H 579 REMARK 465 MET I -20 REMARK 465 LYS I -19 REMARK 465 PHE I -18 REMARK 465 PHE I -17 REMARK 465 THR I -16 REMARK 465 VAL I -15 REMARK 465 LEU I -14 REMARK 465 PHE I -13 REMARK 465 PHE I -12 REMARK 465 LEU I -11 REMARK 465 LEU I -10 REMARK 465 SER I -9 REMARK 465 ILE I -8 REMARK 465 ILE I -7 REMARK 465 TYR I -6 REMARK 465 LEU I -5 REMARK 465 ILE I -4 REMARK 465 VAL I -3 REMARK 465 ALA I -2 REMARK 465 ALA I -1 REMARK 465 PRO I 0 REMARK 465 GLY I 13 REMARK 465 ASP I 14 REMARK 465 SER I 15 REMARK 465 SER I 16 REMARK 465 GLU I 17 REMARK 465 GLU I 18 REMARK 465 VAL I 19 REMARK 465 GLY I 20 REMARK 465 GLY I 21 REMARK 465 THR I 22 REMARK 465 PRO I 23 REMARK 465 LEU I 24 REMARK 465 HIS I 25 REMARK 465 GLU I 26 REMARK 465 LEU I 32 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE L 299 -85.07 -129.18 REMARK 500 TYR H 367 86.05 -152.10 REMARK 500 ASN H 373 79.78 -156.22 REMARK 500 HIS H 386 -39.05 -131.01 REMARK 500 ASN H 394 -21.47 68.47 REMARK 500 ASN H 415 11.14 -150.56 REMARK 500 PRO I 28 83.98 -63.38 REMARK 500 ILE I 30 65.79 -107.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6TKG RELATED DB: PDB REMARK 900 RELATED ID: 6TKH RELATED DB: PDB REMARK 900 RELATED ID: 6TKI RELATED DB: PDB DBREF 6TKJ L 285 320 UNP P00734 THRB_HUMAN 328 363 DBREF 6TKJ H 321 579 UNP P00734 THRB_HUMAN 364 622 DBREF 6TKJ I -20 32 UNP O97373 TTI_GLOMM 1 53 SEQRES 1 L 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO SEQRES 2 L 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG SEQRES 3 L 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG SEQRES 1 H 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 H 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 H 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 H 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 H 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 H 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 H 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 H 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 H 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 H 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 H 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 H 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 H 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 H 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 H 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 H 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 H 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 H 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP SEQRES 19 H 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 H 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU SEQRES 1 I 53 MET LYS PHE PHE THR VAL LEU PHE PHE LEU LEU SER ILE SEQRES 2 I 53 ILE TYR LEU ILE VAL ALA ALA PRO GLY GLU PRO GLY ALA SEQRES 3 I 53 PRO ILE ASP TYS ASP GLU TYS GLY ASP SER SER GLU GLU SEQRES 4 I 53 VAL GLY GLY THR PRO LEU HIS GLU ILE PRO GLY ILE ARG SEQRES 5 I 53 LEU MODRES 6TKJ TYS I 9 TYR MODIFIED RESIDUE MODRES 6TKJ TYS I 12 TYR MODIFIED RESIDUE HET TYS I 9 16 HET TYS I 12 16 HET NAG H 601 14 HETNAM TYS O-SULFO-L-TYROSINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 TYS 2(C9 H11 N O6 S) FORMUL 4 NAG C8 H15 N O6 FORMUL 5 HOH *20(H2 O) HELIX 1 AA1 PHE L 299 SER L 303 5 5 HELIX 2 AA2 THR L 308 ASP L 318 1 11 HELIX 3 AA3 ALA H 361 CYS H 364 5 4 HELIX 4 AA4 PRO H 368 ASP H 371 5 4 HELIX 5 AA5 THR H 375 ASN H 377 5 3 HELIX 6 AA6 ASP H 442 LEU H 450 1 9 HELIX 7 AA7 GLU H 489 THR H 497 1 9 HELIX 8 AA8 LYS H 511 GLY H 515 5 5 HELIX 9 AA9 LEU H 566 PHE H 577 1 12 SHEET 1 AA1 7 SER H 325 ASP H 326 0 SHEET 2 AA1 7 GLN H 481 PRO H 486 -1 O VAL H 482 N SER H 325 SHEET 3 AA1 7 LYS H 455 GLY H 460 -1 N GLY H 456 O LEU H 485 SHEET 4 AA1 7 PRO H 528 LYS H 532 -1 O VAL H 530 N ARG H 457 SHEET 5 AA1 7 TRP H 539 TRP H 547 -1 O TYR H 540 N MET H 531 SHEET 6 AA1 7 GLY H 558 HIS H 562 -1 O PHE H 559 N TRP H 547 SHEET 7 AA1 7 MET H 505 ALA H 508 -1 N PHE H 506 O TYR H 560 SHEET 1 AA2 7 LYS H 397 SER H 399 0 SHEET 2 AA2 7 LEU H 379 ILE H 383 -1 N ILE H 383 O LYS H 397 SHEET 3 AA2 7 GLN H 335 ARG H 340 -1 N PHE H 339 O LEU H 380 SHEET 4 AA2 7 GLU H 345 LEU H 352 -1 O CYS H 348 N LEU H 338 SHEET 5 AA2 7 TRP H 357 THR H 360 -1 O LEU H 359 N SER H 351 SHEET 6 AA2 7 ALA H 421 LEU H 425 -1 O ALA H 421 N THR H 360 SHEET 7 AA2 7 LEU H 401 ILE H 406 -1 N GLU H 402 O LYS H 424 SHEET 1 AA3 2 LEU H 366 TYR H 367 0 SHEET 2 AA3 2 LYS H 372 ASN H 373 -1 O LYS H 372 N TYR H 367 SSBOND 1 CYS L 293 CYS H 439 1555 1555 2.05 SSBOND 2 CYS H 348 CYS H 364 1555 1555 2.05 SSBOND 3 CYS H 493 CYS H 507 1555 1555 2.01 SSBOND 4 CYS H 521 CYS H 551 1555 1555 2.05 LINK ND2 ASN H 373 C1 NAG H 601 1555 1555 1.45 LINK C ASP I 8 N TYS I 9 1555 1555 1.33 LINK C TYS I 9 N ASP I 10 1555 1555 1.33 LINK C GLU I 11 N TYS I 12 1555 1555 1.33 CISPEP 1 SER H 342 PRO H 343 0 -3.93 CRYST1 114.977 114.977 62.512 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008697 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008697 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015997 0.00000