HEADER SIGNALING PROTEIN 02-DEC-19 6TLF TITLE HUMAN 14-3-3 SIGMA ISOFORM IN COMPLEX WITH IMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: 14-3-3 PROTEIN SIGMA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EPITHELIAL CELL MARKER PROTEIN 1,STRATIFIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SFN, HME1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPROEX-HTB KEYWDS HUMAN PROTEIN, H14-3-3SIGMA, SIGNALING PROTEIN, COMPLEX, INOSINE KEYWDS 2 MONOPHOSPHATE, IMP EXPDTA X-RAY DIFFRACTION AUTHOR G.TASSONE,C.POZZI,S.MANGANI REVDAT 3 24-JAN-24 6TLF 1 REMARK REVDAT 2 29-APR-20 6TLF 1 JRNL REVDAT 1 18-MAR-20 6TLF 0 JRNL AUTH L.IRALDE-LORENTE,G.TASSONE,L.CLEMENTI,L.FRANCI,C.C.MUNIER, JRNL AUTH 2 Y.CAU,M.MORI,M.CHIARIELLO,A.ANGELUCCI,M.W.D.PERRY,C.POZZI, JRNL AUTH 3 S.MANGANI,M.BOTTA JRNL TITL IDENTIFICATION OF PHOSPHATE-CONTAINING COMPOUNDS AS NEW JRNL TITL 2 INHIBITORS OF 14-3-3/C-ABL PROTEIN-PROTEIN INTERACTION. JRNL REF ACS CHEM.BIOL. V. 15 1026 2020 JRNL REFN ESSN 1554-8937 JRNL PMID 32142251 JRNL DOI 10.1021/ACSCHEMBIO.0C00039 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0238 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 78.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 11508 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 586 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 788 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3290 REMARK 3 BIN FREE R VALUE SET COUNT : 35 REMARK 3 BIN FREE R VALUE : 0.3070 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1686 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 22 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 6.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : 0.04000 REMARK 3 B33 (A**2) : -0.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.403 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.289 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.258 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.867 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1738 ; 0.012 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2353 ; 1.990 ; 1.633 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 222 ; 7.656 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 85 ;37.208 ;23.059 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 284 ;21.396 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;19.321 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 235 ; 0.148 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1314 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6TLF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1292105656. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-APR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9159 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11508 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 84.880 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.92800 REMARK 200 R SYM FOR SHELL (I) : 0.44800 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1YZ5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40 % WT/VOL PEG 4000, 600MM AMMONIUM REMARK 280 SULFATE, 100 MM TRIS-HCL, PH 9.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.64700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.50850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.44800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 78.50850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.64700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 50.44800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.64700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.44800 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 78.50850 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.44800 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.64700 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 78.50850 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 50.44800 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -27 REMARK 465 SER A -26 REMARK 465 TYR A -25 REMARK 465 TYR A -24 REMARK 465 HIS A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 ASP A -17 REMARK 465 TYR A -16 REMARK 465 ASP A -15 REMARK 465 ILE A -14 REMARK 465 PRO A -13 REMARK 465 THR A -12 REMARK 465 THR A -11 REMARK 465 GLU A -10 REMARK 465 ASN A -9 REMARK 465 LEU A -8 REMARK 465 TYR A -7 REMARK 465 PHE A -6 REMARK 465 GLN A -5 REMARK 465 GLU A 72 REMARK 465 GLY A 73 REMARK 465 SER A 74 REMARK 465 GLU A 75 REMARK 465 GLU A 76 REMARK 465 LEU A 208 REMARK 465 SER A 209 REMARK 465 GLU A 210 REMARK 465 ASP A 211 REMARK 465 SER A 212 REMARK 465 TYR A 213 REMARK 465 ALA A 232 REMARK 465 ASP A 233 REMARK 465 ASN A 234 REMARK 465 ALA A 235 REMARK 465 GLY A 236 REMARK 465 GLU A 237 REMARK 465 GLU A 238 REMARK 465 GLY A 239 REMARK 465 GLY A 240 REMARK 465 GLU A 241 REMARK 465 ALA A 242 REMARK 465 PRO A 243 REMARK 465 GLN A 244 REMARK 465 GLU A 245 REMARK 465 PRO A 246 REMARK 465 GLN A 247 REMARK 465 SER A 248 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 34 CD OE1 OE2 REMARK 470 GLU A 35 CG CD OE1 OE2 REMARK 470 LYS A 49 CE NZ REMARK 470 LYS A 68 CG CD CE NZ REMARK 470 SER A 69 OG REMARK 470 LYS A 77 CG CD CE NZ REMARK 470 LYS A 87 NZ REMARK 470 GLU A 110 CG CD OE1 OE2 REMARK 470 ARG A 117 CD NE CZ NH1 NH2 REMARK 470 LYS A 140 NZ REMARK 470 LYS A 141 CD CE NZ REMARK 470 ILE A 157 CD1 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 160 CE NZ REMARK 470 MET A 162 CG SD CE REMARK 470 ILE A 168 CD1 REMARK 470 ARG A 169 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 188 CD OE1 OE2 REMARK 470 GLU A 189 CD OE1 OE2 REMARK 470 ILE A 191 CG1 CG2 CD1 REMARK 470 LEU A 193 CG CD1 CD2 REMARK 470 LYS A 195 CG CD CE NZ REMARK 470 LYS A 214 CG CD CE NZ REMARK 470 LEU A 218 CD1 CD2 REMARK 470 GLN A 221 CD OE1 NE2 REMARK 470 LEU A 222 CD1 CD2 REMARK 470 ARG A 224 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 229 CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 68 1.82 -65.91 REMARK 500 HIS A 106 -61.91 -124.77 REMARK 500 GLU A 110 44.82 -81.20 REMARK 500 ALA A 111 101.02 -164.02 REMARK 500 ASP A 113 -13.97 -48.37 REMARK 500 ALA A 114 -44.70 69.50 REMARK 500 GLU A 115 -9.55 -56.70 REMARK 500 PRO A 164 46.29 -74.05 REMARK 500 ASN A 166 104.86 -43.74 REMARK 500 LEU A 170 -73.86 -56.72 REMARK 500 ILE A 183 -57.28 -131.01 REMARK 500 LYS A 195 -72.79 -61.68 REMARK 500 ASP A 199 -72.66 -59.58 REMARK 500 GLU A 200 0.84 -65.24 REMARK 500 ALA A 203 -70.04 -62.38 REMARK 500 ASP A 215 -22.42 -144.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 419 DISTANCE = 6.31 ANGSTROMS REMARK 525 HOH A 420 DISTANCE = 7.80 ANGSTROMS REMARK 525 HOH A 421 DISTANCE = 8.50 ANGSTROMS REMARK 525 HOH A 422 DISTANCE = 9.30 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 DBREF 6TLF A 1 248 UNP P31947 1433S_HUMAN 1 248 SEQADV 6TLF MET A -27 UNP P31947 INITIATING METHIONINE SEQADV 6TLF SER A -26 UNP P31947 EXPRESSION TAG SEQADV 6TLF TYR A -25 UNP P31947 EXPRESSION TAG SEQADV 6TLF TYR A -24 UNP P31947 EXPRESSION TAG SEQADV 6TLF HIS A -23 UNP P31947 EXPRESSION TAG SEQADV 6TLF HIS A -22 UNP P31947 EXPRESSION TAG SEQADV 6TLF HIS A -21 UNP P31947 EXPRESSION TAG SEQADV 6TLF HIS A -20 UNP P31947 EXPRESSION TAG SEQADV 6TLF HIS A -19 UNP P31947 EXPRESSION TAG SEQADV 6TLF HIS A -18 UNP P31947 EXPRESSION TAG SEQADV 6TLF ASP A -17 UNP P31947 EXPRESSION TAG SEQADV 6TLF TYR A -16 UNP P31947 EXPRESSION TAG SEQADV 6TLF ASP A -15 UNP P31947 EXPRESSION TAG SEQADV 6TLF ILE A -14 UNP P31947 EXPRESSION TAG SEQADV 6TLF PRO A -13 UNP P31947 EXPRESSION TAG SEQADV 6TLF THR A -12 UNP P31947 EXPRESSION TAG SEQADV 6TLF THR A -11 UNP P31947 EXPRESSION TAG SEQADV 6TLF GLU A -10 UNP P31947 EXPRESSION TAG SEQADV 6TLF ASN A -9 UNP P31947 EXPRESSION TAG SEQADV 6TLF LEU A -8 UNP P31947 EXPRESSION TAG SEQADV 6TLF TYR A -7 UNP P31947 EXPRESSION TAG SEQADV 6TLF PHE A -6 UNP P31947 EXPRESSION TAG SEQADV 6TLF GLN A -5 UNP P31947 EXPRESSION TAG SEQADV 6TLF GLY A -4 UNP P31947 EXPRESSION TAG SEQADV 6TLF ALA A -3 UNP P31947 EXPRESSION TAG SEQADV 6TLF MET A -2 UNP P31947 EXPRESSION TAG SEQADV 6TLF GLY A -1 UNP P31947 EXPRESSION TAG SEQADV 6TLF SER A 0 UNP P31947 EXPRESSION TAG SEQRES 1 A 276 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 A 276 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 A 276 GLY SER MET GLU ARG ALA SER LEU ILE GLN LYS ALA LYS SEQRES 4 A 276 LEU ALA GLU GLN ALA GLU ARG TYR GLU ASP MET ALA ALA SEQRES 5 A 276 PHE MET LYS GLY ALA VAL GLU LYS GLY GLU GLU LEU SER SEQRES 6 A 276 CYS GLU GLU ARG ASN LEU LEU SER VAL ALA TYR LYS ASN SEQRES 7 A 276 VAL VAL GLY GLY GLN ARG ALA ALA TRP ARG VAL LEU SER SEQRES 8 A 276 SER ILE GLU GLN LYS SER ASN GLU GLU GLY SER GLU GLU SEQRES 9 A 276 LYS GLY PRO GLU VAL ARG GLU TYR ARG GLU LYS VAL GLU SEQRES 10 A 276 THR GLU LEU GLN GLY VAL CYS ASP THR VAL LEU GLY LEU SEQRES 11 A 276 LEU ASP SER HIS LEU ILE LYS GLU ALA GLY ASP ALA GLU SEQRES 12 A 276 SER ARG VAL PHE TYR LEU LYS MET LYS GLY ASP TYR TYR SEQRES 13 A 276 ARG TYR LEU ALA GLU VAL ALA THR GLY ASP ASP LYS LYS SEQRES 14 A 276 ARG ILE ILE ASP SER ALA ARG SER ALA TYR GLN GLU ALA SEQRES 15 A 276 MET ASP ILE SER LYS LYS GLU MET PRO PRO THR ASN PRO SEQRES 16 A 276 ILE ARG LEU GLY LEU ALA LEU ASN PHE SER VAL PHE HIS SEQRES 17 A 276 TYR GLU ILE ALA ASN SER PRO GLU GLU ALA ILE SER LEU SEQRES 18 A 276 ALA LYS THR THR PHE ASP GLU ALA MET ALA ASP LEU HIS SEQRES 19 A 276 THR LEU SER GLU ASP SER TYR LYS ASP SER THR LEU ILE SEQRES 20 A 276 MET GLN LEU LEU ARG ASP ASN LEU THR LEU TRP THR ALA SEQRES 21 A 276 ASP ASN ALA GLY GLU GLU GLY GLY GLU ALA PRO GLN GLU SEQRES 22 A 276 PRO GLN SER HET IMP A 301 23 HET SO4 A 302 5 HETNAM IMP INOSINIC ACID HETNAM SO4 SULFATE ION FORMUL 2 IMP C10 H13 N4 O8 P FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *22(H2 O) HELIX 1 AA1 GLU A 2 GLU A 17 1 16 HELIX 2 AA2 ARG A 18 GLU A 31 1 14 HELIX 3 AA3 SER A 37 GLU A 66 1 30 HELIX 4 AA4 PRO A 79 HIS A 106 1 28 HELIX 5 AA5 SER A 116 GLU A 133 1 18 HELIX 6 AA6 THR A 136 MET A 162 1 27 HELIX 7 AA7 ASN A 166 ILE A 183 1 18 HELIX 8 AA8 SER A 186 ASP A 204 1 19 HELIX 9 AA9 SER A 216 THR A 231 1 16 SITE 1 AC1 4 ARG A 56 ARG A 129 TYR A 130 ASN A 175 SITE 1 AC2 3 GLY A -4 PRO A 79 ARG A 82 CRYST1 63.294 100.896 157.017 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015799 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009911 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006369 0.00000