HEADER OXIDOREDUCTASE 09-DEC-19 6TNM TITLE E. COLI AEROBIC TRIFUNCTIONAL ENZYME SUBUNIT-ALPHA COMPND MOL_ID: 1; COMPND 2 MOLECULE: FATTY ACID OXIDATION COMPLEX SUBUNIT ALPHA; COMPND 3 CHAIN: A; COMPND 4 EC: 4.2.1.17,5.1.2.3,5.3.3.8,1.1.1.35; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 VARIANT: MG1655; SOURCE 5 GENE: FADB, OLDB, B3846, JW3822; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETDUET-1 KEYWDS FATTY ACID OXIDATION, LIPID METABOLISM, HYDRATASE, DEHYDROGENASE, KEYWDS 2 TRIFUNCTIONAL ENZYME, BETA OXIDATION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.K.SAH-TELI,M.J.HYNONEN,R.K.WIERENGA,R.VENKATESAN REVDAT 3 24-JAN-24 6TNM 1 REMARK REVDAT 2 20-MAY-20 6TNM 1 JRNL REVDAT 1 25-MAR-20 6TNM 0 JRNL AUTH S.K.SAH-TELI,M.J.HYNONEN,R.SULU,S.DALWANI,W.SCHMITZ, JRNL AUTH 2 R.K.WIERENGA,R.VENKATESAN JRNL TITL INSIGHTS INTO THE STABILITY AND SUBSTRATE SPECIFICITY OF THE JRNL TITL 2 E. COLI AEROBIC BETA-OXIDATION TRIFUNCTIONAL ENZYME COMPLEX. JRNL REF J.STRUCT.BIOL. V. 210 07494 2020 JRNL REFN ESSN 1095-8657 JRNL PMID 32171906 JRNL DOI 10.1016/J.JSB.2020.107494 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH S.K.SAH-TELI,M.J.HYNONEN,W.SCHMITZ,J.A.GERAETS,J.SEITSONEN, REMARK 1 AUTH 2 J.S.PEDERSEN,S.J.BUTCHER,R.K.WIERENGA,R.VENKATESAN REMARK 1 TITL COMPLEMENTARY SUBSTRATE SPECIFICITY AND DISTINCT QUATERNARY REMARK 1 TITL 2 ASSEMBLY OF THE ESCHIERICHIA COLI AEROBIC AND ANAEROBIC REMARK 1 TITL 3 B-OXIDATION TRIFUNCTIONAL ENZYME COMPLEXES REMARK 1 REF BIOCHEM. J. V. 476 1975 2019 REMARK 1 REFN ESSN 1470-8728 REMARK 1 PMID 31235482 REMARK 1 DOI 10.1042/BCJ20190314 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.430 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 22993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.232 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 1082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.5300 - 5.9000 1.00 2888 129 0.1789 0.1985 REMARK 3 2 5.9000 - 4.6800 1.00 2779 134 0.1901 0.2102 REMARK 3 3 4.6800 - 4.0900 1.00 2760 109 0.1757 0.2264 REMARK 3 4 4.0900 - 3.7200 1.00 2733 138 0.2312 0.2889 REMARK 3 5 3.7200 - 3.4500 1.00 2692 153 0.2695 0.2986 REMARK 3 6 3.4500 - 3.2500 1.00 2697 136 0.3154 0.3585 REMARK 3 7 3.2500 - 3.0800 1.00 2689 139 0.3312 0.3625 REMARK 3 8 3.0800 - 2.9500 1.00 2673 144 0.3523 0.3936 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.425 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.693 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.85 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 62.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5712 REMARK 3 ANGLE : 0.599 7732 REMARK 3 CHIRALITY : 0.041 859 REMARK 3 PLANARITY : 0.004 999 REMARK 3 DIHEDRAL : 18.037 3443 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.8905 52.5645 -7.4674 REMARK 3 T TENSOR REMARK 3 T11: 0.3726 T22: 0.3682 REMARK 3 T33: 0.2126 T12: -0.0594 REMARK 3 T13: -0.0064 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 0.9609 L22: 1.5308 REMARK 3 L33: 2.1839 L12: 0.0576 REMARK 3 L13: 0.1489 L23: -0.6469 REMARK 3 S TENSOR REMARK 3 S11: -0.0448 S12: 0.0159 S13: 0.0392 REMARK 3 S21: 0.2173 S22: -0.0698 S23: -0.2578 REMARK 3 S31: -0.3924 S32: 0.5757 S33: 0.0632 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 483 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.6558 12.6661 -22.5313 REMARK 3 T TENSOR REMARK 3 T11: 0.2932 T22: 0.5002 REMARK 3 T33: 0.7569 T12: -0.0035 REMARK 3 T13: -0.1388 T23: -0.2628 REMARK 3 L TENSOR REMARK 3 L11: 0.5860 L22: 1.1589 REMARK 3 L33: 1.0688 L12: -0.4419 REMARK 3 L13: -0.6477 L23: 0.8370 REMARK 3 S TENSOR REMARK 3 S11: 0.0771 S12: 0.0537 S13: -0.2070 REMARK 3 S21: 0.1205 S22: 0.4054 S23: -0.7123 REMARK 3 S31: -0.0471 S32: 0.3929 S33: -0.1192 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 484 THROUGH 644 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.6163 18.2231 -28.6106 REMARK 3 T TENSOR REMARK 3 T11: 0.3274 T22: 0.4318 REMARK 3 T33: 0.3728 T12: 0.0279 REMARK 3 T13: -0.0577 T23: -0.1349 REMARK 3 L TENSOR REMARK 3 L11: 2.3069 L22: 2.0154 REMARK 3 L33: 2.2048 L12: 0.2034 REMARK 3 L13: 0.2801 L23: 0.6234 REMARK 3 S TENSOR REMARK 3 S11: 0.1596 S12: 0.5381 S13: -0.3494 REMARK 3 S21: -0.3040 S22: -0.0139 S23: 0.1070 REMARK 3 S31: 0.0765 S32: -0.1166 S33: -0.0855 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 645 THROUGH 719 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8898 22.6517 -8.4064 REMARK 3 T TENSOR REMARK 3 T11: 0.3166 T22: 0.3069 REMARK 3 T33: 0.3638 T12: -0.0888 REMARK 3 T13: -0.0827 T23: -0.1006 REMARK 3 L TENSOR REMARK 3 L11: 1.9883 L22: 1.6879 REMARK 3 L33: 1.8402 L12: -0.1758 REMARK 3 L13: -0.5496 L23: -0.2444 REMARK 3 S TENSOR REMARK 3 S11: 0.1939 S12: -0.2088 S13: 0.0194 REMARK 3 S21: 0.3289 S22: -0.0690 S23: 0.0502 REMARK 3 S31: -0.0144 S32: -0.3436 S33: -0.0329 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TNM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1292105451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2-7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL 28.290M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 2 REMARK 200 DATA SCALING SOFTWARE : DIALS 1.14 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23039 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.949 REMARK 200 RESOLUTION RANGE LOW (A) : 65.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.13 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA REMARK 200 STARTING MODEL: 1WDK-CHAINA REMARK 200 REMARK 200 REMARK: ROD SHAPE, LONG, BRANCHED, CLUSTER REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRIS PROPANE, PH 7.5, 25% REMARK 280 W/V PEG 3550, 367 MM KNO3 AND 25 MM ATP, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.26000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.26000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 65.19200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 107.05650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 65.19200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 107.05650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.26000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 65.19200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 107.05650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 38.26000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 65.19200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 107.05650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 GLY A -12 REMARK 465 SER A -11 REMARK 465 SER A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 SER A -3 REMARK 465 GLN A -2 REMARK 465 ASP A -1 REMARK 465 PRO A 0 REMARK 465 ALA A 720 REMARK 465 ARG A 721 REMARK 465 PRO A 722 REMARK 465 VAL A 723 REMARK 465 GLY A 724 REMARK 465 ASP A 725 REMARK 465 LEU A 726 REMARK 465 LYS A 727 REMARK 465 THR A 728 REMARK 465 ALA A 729 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 14 -105.84 55.60 REMARK 500 PHE A 64 -86.27 -99.88 REMARK 500 ALA A 113 70.93 -153.21 REMARK 500 PRO A 138 42.87 -90.50 REMARK 500 ILE A 144 -154.95 -104.75 REMARK 500 PHE A 148 54.48 -114.03 REMARK 500 ALA A 321 58.32 -114.35 REMARK 500 ASP A 343 -139.02 -119.61 REMARK 500 ASP A 386 -159.46 -97.97 REMARK 500 TYR A 387 51.04 -103.84 REMARK 500 ALA A 399 51.36 -116.13 REMARK 500 ASN A 427 38.28 -98.93 REMARK 500 THR A 430 -29.16 -142.96 REMARK 500 SER A 470 -177.88 -68.90 REMARK 500 PHE A 497 -122.43 61.06 REMARK 500 ASP A 570 -169.33 -108.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 804 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 805 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 807 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 808 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NO3 A 809 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SASDEL9 RELATED DB: SASBDB REMARK 900 THIS SAXS MODEL IS FOR THE HETERO-TETRAMER (A2B2) COMPLEX. DBREF 6TNM A 1 729 UNP P21177 FADB_ECOLI 1 729 SEQADV 6TNM MET A -13 UNP P21177 INITIATING METHIONINE SEQADV 6TNM GLY A -12 UNP P21177 EXPRESSION TAG SEQADV 6TNM SER A -11 UNP P21177 EXPRESSION TAG SEQADV 6TNM SER A -10 UNP P21177 EXPRESSION TAG SEQADV 6TNM HIS A -9 UNP P21177 EXPRESSION TAG SEQADV 6TNM HIS A -8 UNP P21177 EXPRESSION TAG SEQADV 6TNM HIS A -7 UNP P21177 EXPRESSION TAG SEQADV 6TNM HIS A -6 UNP P21177 EXPRESSION TAG SEQADV 6TNM HIS A -5 UNP P21177 EXPRESSION TAG SEQADV 6TNM HIS A -4 UNP P21177 EXPRESSION TAG SEQADV 6TNM SER A -3 UNP P21177 EXPRESSION TAG SEQADV 6TNM GLN A -2 UNP P21177 EXPRESSION TAG SEQADV 6TNM ASP A -1 UNP P21177 EXPRESSION TAG SEQADV 6TNM PRO A 0 UNP P21177 EXPRESSION TAG SEQRES 1 A 743 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER GLN ASP SEQRES 2 A 743 PRO MET LEU TYR LYS GLY ASP THR LEU TYR LEU ASP TRP SEQRES 3 A 743 LEU GLU ASP GLY ILE ALA GLU LEU VAL PHE ASP ALA PRO SEQRES 4 A 743 GLY SER VAL ASN LYS LEU ASP THR ALA THR VAL ALA SER SEQRES 5 A 743 LEU GLY GLU ALA ILE GLY VAL LEU GLU GLN GLN SER ASP SEQRES 6 A 743 LEU LYS GLY LEU LEU LEU ARG SER ASN LYS ALA ALA PHE SEQRES 7 A 743 ILE VAL GLY ALA ASP ILE THR GLU PHE LEU SER LEU PHE SEQRES 8 A 743 LEU VAL PRO GLU GLU GLN LEU SER GLN TRP LEU HIS PHE SEQRES 9 A 743 ALA ASN SER VAL PHE ASN ARG LEU GLU ASP LEU PRO VAL SEQRES 10 A 743 PRO THR ILE ALA ALA VAL ASN GLY TYR ALA LEU GLY GLY SEQRES 11 A 743 GLY CYS GLU CYS VAL LEU ALA THR ASP TYR ARG LEU ALA SEQRES 12 A 743 THR PRO ASP LEU ARG ILE GLY LEU PRO GLU THR LYS LEU SEQRES 13 A 743 GLY ILE MET PRO GLY PHE GLY GLY SER VAL ARG MET PRO SEQRES 14 A 743 ARG MET LEU GLY ALA ASP SER ALA LEU GLU ILE ILE ALA SEQRES 15 A 743 ALA GLY LYS ASP VAL GLY ALA ASP GLN ALA LEU LYS ILE SEQRES 16 A 743 GLY LEU VAL ASP GLY VAL VAL LYS ALA GLU LYS LEU VAL SEQRES 17 A 743 GLU GLY ALA LYS ALA VAL LEU ARG GLN ALA ILE ASN GLY SEQRES 18 A 743 ASP LEU ASP TRP LYS ALA LYS ARG GLN PRO LYS LEU GLU SEQRES 19 A 743 PRO LEU LYS LEU SER LYS ILE GLU ALA THR MET SER PHE SEQRES 20 A 743 THR ILE ALA LYS GLY MET VAL ALA GLN THR ALA GLY LYS SEQRES 21 A 743 HIS TYR PRO ALA PRO ILE THR ALA VAL LYS THR ILE GLU SEQRES 22 A 743 ALA ALA ALA ARG PHE GLY ARG GLU GLU ALA LEU ASN LEU SEQRES 23 A 743 GLU ASN LYS SER PHE VAL PRO LEU ALA HIS THR ASN GLU SEQRES 24 A 743 ALA ARG ALA LEU VAL GLY ILE PHE LEU ASN ASP GLN TYR SEQRES 25 A 743 VAL LYS GLY LYS ALA LYS LYS LEU THR LYS ASP VAL GLU SEQRES 26 A 743 THR PRO LYS GLN ALA ALA VAL LEU GLY ALA GLY ILE MET SEQRES 27 A 743 GLY GLY GLY ILE ALA TYR GLN SER ALA TRP LYS GLY VAL SEQRES 28 A 743 PRO VAL VAL MET LYS ASP ILE ASN ASP LYS SER LEU THR SEQRES 29 A 743 LEU GLY MET THR GLU ALA ALA LYS LEU LEU ASN LYS GLN SEQRES 30 A 743 LEU GLU ARG GLY LYS ILE ASP GLY LEU LYS LEU ALA GLY SEQRES 31 A 743 VAL ILE SER THR ILE HIS PRO THR LEU ASP TYR ALA GLY SEQRES 32 A 743 PHE ASP ARG VAL ASP ILE VAL VAL GLU ALA VAL VAL GLU SEQRES 33 A 743 ASN PRO LYS VAL LYS LYS ALA VAL LEU ALA GLU THR GLU SEQRES 34 A 743 GLN LYS VAL ARG GLN ASP THR VAL LEU ALA SER ASN THR SEQRES 35 A 743 SER THR ILE PRO ILE SER GLU LEU ALA ASN ALA LEU GLU SEQRES 36 A 743 ARG PRO GLU ASN PHE CYS GLY MET HIS PHE PHE ASN PRO SEQRES 37 A 743 VAL HIS ARG MET PRO LEU VAL GLU ILE ILE ARG GLY GLU SEQRES 38 A 743 LYS SER SER ASP GLU THR ILE ALA LYS VAL VAL ALA TRP SEQRES 39 A 743 ALA SER LYS MET GLY LYS THR PRO ILE VAL VAL ASN ASP SEQRES 40 A 743 CYS PRO GLY PHE PHE VAL ASN ARG VAL LEU PHE PRO TYR SEQRES 41 A 743 PHE ALA GLY PHE SER GLN LEU LEU ARG ASP GLY ALA ASP SEQRES 42 A 743 PHE ARG LYS ILE ASP LYS VAL MET GLU LYS GLN PHE GLY SEQRES 43 A 743 TRP PRO MET GLY PRO ALA TYR LEU LEU ASP VAL VAL GLY SEQRES 44 A 743 ILE ASP THR ALA HIS HIS ALA GLN ALA VAL MET ALA ALA SEQRES 45 A 743 GLY PHE PRO GLN ARG MET GLN LYS ASP TYR ARG ASP ALA SEQRES 46 A 743 ILE ASP ALA LEU PHE ASP ALA ASN ARG PHE GLY GLN LYS SEQRES 47 A 743 ASN GLY LEU GLY PHE TRP ARG TYR LYS GLU ASP SER LYS SEQRES 48 A 743 GLY LYS PRO LYS LYS GLU GLU ASP ALA ALA VAL GLU ASP SEQRES 49 A 743 LEU LEU ALA GLU VAL SER GLN PRO LYS ARG ASP PHE SER SEQRES 50 A 743 GLU GLU GLU ILE ILE ALA ARG MET MET ILE PRO MET VAL SEQRES 51 A 743 ASN GLU VAL VAL ARG CYS LEU GLU GLU GLY ILE ILE ALA SEQRES 52 A 743 THR PRO ALA GLU ALA ASP MET ALA LEU VAL TYR GLY LEU SEQRES 53 A 743 GLY PHE PRO PRO PHE HIS GLY GLY ALA PHE ARG TRP LEU SEQRES 54 A 743 ASP THR LEU GLY SER ALA LYS TYR LEU ASP MET ALA GLN SEQRES 55 A 743 GLN TYR GLN HIS LEU GLY PRO LEU TYR GLU VAL PRO GLU SEQRES 56 A 743 GLY LEU ARG ASN LYS ALA ARG HIS ASN GLU PRO TYR TYR SEQRES 57 A 743 PRO PRO VAL GLU PRO ALA ARG PRO VAL GLY ASP LEU LYS SEQRES 58 A 743 THR ALA HET GOL A 801 6 HET ATP A 802 31 HET NO3 A 803 4 HET NO3 A 804 4 HET NO3 A 805 4 HET NO3 A 806 4 HET NO3 A 807 4 HET NO3 A 808 4 HET NO3 A 809 4 HETNAM GOL GLYCEROL HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM NO3 NITRATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 ATP C10 H16 N5 O13 P3 FORMUL 4 NO3 7(N O3 1-) FORMUL 11 HOH *32(H2 O) HELIX 1 AA1 ASP A 32 GLU A 47 1 16 HELIX 2 AA2 ASP A 69 THR A 71 5 3 HELIX 3 AA3 GLU A 72 PHE A 77 1 6 HELIX 4 AA4 PRO A 80 ASP A 100 1 21 HELIX 5 AA5 GLY A 115 THR A 124 1 10 HELIX 6 AA6 GLU A 139 GLY A 143 5 5 HELIX 7 AA7 GLY A 149 GLY A 159 1 11 HELIX 8 AA8 GLY A 159 GLY A 170 1 12 HELIX 9 AA9 ALA A 175 GLY A 182 1 8 HELIX 10 AB1 LYS A 189 ASN A 206 1 18 HELIX 11 AB2 ASP A 210 GLN A 216 1 7 HELIX 12 AB3 PRO A 217 GLU A 220 5 4 HELIX 13 AB4 SER A 225 GLN A 242 1 18 HELIX 14 AB5 TYR A 248 ALA A 261 1 14 HELIX 15 AB6 GLY A 265 THR A 283 1 19 HELIX 16 AB7 THR A 283 THR A 307 1 25 HELIX 17 AB8 GLY A 322 TRP A 334 1 13 HELIX 18 AB9 ASN A 345 ARG A 366 1 22 HELIX 19 AC1 ASP A 370 SER A 379 1 10 HELIX 20 AC2 GLY A 389 VAL A 393 5 5 HELIX 21 AC3 ASN A 403 LYS A 417 1 15 HELIX 22 AC4 PRO A 432 ALA A 437 1 6 HELIX 23 AC5 ASN A 438 LEU A 440 5 3 HELIX 24 AC6 ARG A 442 GLU A 444 5 3 HELIX 25 AC7 SER A 470 MET A 484 1 15 HELIX 26 AC8 PHE A 498 ASP A 516 1 19 HELIX 27 AC9 ASP A 519 GLN A 530 1 12 HELIX 28 AD1 GLY A 536 GLY A 545 1 10 HELIX 29 AD2 GLY A 545 PHE A 560 1 16 HELIX 30 AD3 ASP A 570 ALA A 578 1 9 HELIX 31 AD4 ALA A 606 SER A 616 1 11 HELIX 32 AD5 SER A 623 GLU A 645 1 23 HELIX 33 AD6 THR A 650 LEU A 662 1 13 HELIX 34 AD7 PRO A 665 GLY A 669 5 5 HELIX 35 AD8 GLY A 670 LEU A 678 1 9 HELIX 36 AD9 GLY A 679 GLN A 689 1 11 HELIX 37 AE1 GLY A 694 GLU A 698 5 5 HELIX 38 AE2 PRO A 700 ALA A 707 1 8 SHEET 1 AA1 7 TYR A 3 LYS A 4 0 SHEET 2 AA1 7 LEU A 8 LEU A 13 -1 O LEU A 10 N TYR A 3 SHEET 3 AA1 7 ILE A 17 PHE A 22 -1 O VAL A 21 N TYR A 9 SHEET 4 AA1 7 GLY A 54 SER A 59 1 O GLY A 54 N ALA A 18 SHEET 5 AA1 7 THR A 105 VAL A 109 1 O ALA A 108 N LEU A 57 SHEET 6 AA1 7 TYR A 126 ALA A 129 1 O LEU A 128 N VAL A 109 SHEET 7 AA1 7 GLY A 186 VAL A 187 1 O GLY A 186 N ALA A 129 SHEET 1 AA2 3 TYR A 112 LEU A 114 0 SHEET 2 AA2 3 ARG A 134 GLY A 136 1 O ARG A 134 N ALA A 113 SHEET 3 AA2 3 ASP A 172 GLY A 174 -1 O VAL A 173 N ILE A 135 SHEET 1 AA3 8 ILE A 381 THR A 384 0 SHEET 2 AA3 8 VAL A 339 LYS A 342 1 N MET A 341 O THR A 384 SHEET 3 AA3 8 ALA A 316 LEU A 319 1 N VAL A 318 O VAL A 340 SHEET 4 AA3 8 ILE A 395 GLU A 398 1 O VAL A 397 N ALA A 317 SHEET 5 AA3 8 VAL A 423 SER A 426 1 O ALA A 425 N VAL A 396 SHEET 6 AA3 8 PHE A 446 HIS A 450 1 O MET A 449 N SER A 426 SHEET 7 AA3 8 LEU A 460 ARG A 465 -1 O GLU A 462 N HIS A 450 SHEET 8 AA3 8 THR A 487 ASN A 492 1 O VAL A 491 N ILE A 463 SHEET 1 AA4 2 ARG A 591 LYS A 593 0 SHEET 2 AA4 2 LYS A 601 GLU A 603 -1 O GLU A 603 N ARG A 591 CISPEP 1 ASN A 453 PRO A 454 0 -4.12 SITE 1 AC1 7 PHE A 73 GLU A 119 GLU A 139 ILE A 144 SITE 2 AC1 7 GLY A 147 PHE A 148 PHE A 277 SITE 1 AC2 6 ASP A 343 ILE A 344 VAL A 400 VAL A 401 SITE 2 AC2 6 VAL A 406 LYS A 584 SITE 1 AC3 3 VAL A 66 ILE A 70 GLN A 297 SITE 1 AC4 4 GLY A 115 PRO A 138 GLU A 139 LEU A 142 SITE 1 AC5 2 PHE A 531 TRP A 674 SITE 1 AC6 2 PRO A 454 NO3 A 809 SITE 1 AC7 2 ARG A 134 GLN A 177 SITE 1 AC8 2 ARG A 457 NO3 A 807 CRYST1 130.384 214.113 76.520 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007670 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004670 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013068 0.00000