data_6TOI # _entry.id 6TOI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6TOI pdb_00006toi 10.2210/pdb6toi/pdb WWPDB D_1292104952 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2020-04-22 2 'Structure model' 1 1 2020-05-06 3 'Structure model' 1 2 2024-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6TOI _pdbx_database_status.recvd_initial_deposition_date 2019-12-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Collie, G.W.' 1 0000-0002-0406-922X 'Rodrigues, M.J.' 2 0000-0003-1243-903X 'Le Bihan, Y.-V.' 3 0000-0002-6850-9706 'van Montfort, R.L.M.' 4 0000-0002-5688-3450 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Med.Chem. _citation.journal_id_ASTM JMCMAR _citation.journal_id_CSD 0151 _citation.journal_id_ISSN 0022-2623 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 63 _citation.language ? _citation.page_first 4047 _citation.page_last 4068 _citation.title 'AchievingIn VivoTarget Depletion through the Discovery and Optimization of Benzimidazolone BCL6 Degraders.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.jmedchem.9b02076 _citation.pdbx_database_id_PubMed 32275432 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bellenie, B.R.' 1 ? primary 'Cheung, K.J.' 2 ? primary 'Varela, A.' 3 ? primary 'Pierrat, O.A.' 4 ? primary 'Collie, G.W.' 5 ? primary 'Box, G.M.' 6 ? primary 'Bright, M.D.' 7 ? primary 'Gowan, S.' 8 ? primary 'Hayes, A.' 9 ? primary 'Rodrigues, M.J.' 10 ? primary 'Shetty, K.N.' 11 ? primary 'Carter, M.' 12 ? primary 'Davis, O.A.' 13 ? primary 'Henley, A.T.' 14 ? primary 'Innocenti, P.' 15 ? primary 'Johnson, L.D.' 16 ? primary 'Liu, M.' 17 ? primary 'de Klerk, S.' 18 ? primary 'Le Bihan, Y.V.' 19 ? primary 'Lloyd, M.G.' 20 ? primary 'McAndrew, P.C.' 21 ? primary 'Shehu, E.' 22 ? primary 'Talbot, R.' 23 ? primary 'Woodward, H.L.' 24 ? primary 'Burke, R.' 25 ? primary 'Kirkin, V.' 26 ? primary 'van Montfort, R.L.M.' 27 ? primary 'Raynaud, F.I.' 28 ? primary 'Rossanese, O.W.' 29 ? primary 'Hoelder, S.' 30 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'B-cell lymphoma 6 protein' 14536.915 1 ? ? ? ? 2 polymer syn ALA-TRP-VAL-ILE-PRO-ALA 655.784 1 ? ? ? ? 3 non-polymer syn '2-chloranyl-4-[[1-methyl-3-[(3~{R})-3-oxidanylbutyl]-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile' 371.821 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 5 ? ? ? ? 5 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 2 ? ? ? ? 6 water nat water 18.015 156 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BCL-6,B-cell lymphoma 5 protein,BCL-5,Protein LAZ-3,Zinc finger and BTB domain-containing protein 27,Zinc finger protein 51' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPGADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPE GFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; ;GPGADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPE GFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; A ? 2 'polypeptide(L)' no no AWVIPA AWVIPA B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 '2-chloranyl-4-[[1-methyl-3-[(3~{R})-3-oxidanylbutyl]-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile' NQN 4 1,2-ETHANEDIOL EDO 5 'DIMETHYL SULFOXIDE' DMS 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 GLY n 1 4 ALA n 1 5 ASP n 1 6 SER n 1 7 CYS n 1 8 ILE n 1 9 GLN n 1 10 PHE n 1 11 THR n 1 12 ARG n 1 13 HIS n 1 14 ALA n 1 15 SER n 1 16 ASP n 1 17 VAL n 1 18 LEU n 1 19 LEU n 1 20 ASN n 1 21 LEU n 1 22 ASN n 1 23 ARG n 1 24 LEU n 1 25 ARG n 1 26 SER n 1 27 ARG n 1 28 ASP n 1 29 ILE n 1 30 LEU n 1 31 THR n 1 32 ASP n 1 33 VAL n 1 34 VAL n 1 35 ILE n 1 36 VAL n 1 37 VAL n 1 38 SER n 1 39 ARG n 1 40 GLU n 1 41 GLN n 1 42 PHE n 1 43 ARG n 1 44 ALA n 1 45 HIS n 1 46 LYS n 1 47 THR n 1 48 VAL n 1 49 LEU n 1 50 MET n 1 51 ALA n 1 52 CYS n 1 53 SER n 1 54 GLY n 1 55 LEU n 1 56 PHE n 1 57 TYR n 1 58 SER n 1 59 ILE n 1 60 PHE n 1 61 THR n 1 62 ASP n 1 63 GLN n 1 64 LEU n 1 65 LYS n 1 66 CYS n 1 67 ASN n 1 68 LEU n 1 69 SER n 1 70 VAL n 1 71 ILE n 1 72 ASN n 1 73 LEU n 1 74 ASP n 1 75 PRO n 1 76 GLU n 1 77 ILE n 1 78 ASN n 1 79 PRO n 1 80 GLU n 1 81 GLY n 1 82 PHE n 1 83 CYS n 1 84 ILE n 1 85 LEU n 1 86 LEU n 1 87 ASP n 1 88 PHE n 1 89 MET n 1 90 TYR n 1 91 THR n 1 92 SER n 1 93 ARG n 1 94 LEU n 1 95 ASN n 1 96 LEU n 1 97 ARG n 1 98 GLU n 1 99 GLY n 1 100 ASN n 1 101 ILE n 1 102 MET n 1 103 ALA n 1 104 VAL n 1 105 MET n 1 106 ALA n 1 107 THR n 1 108 ALA n 1 109 MET n 1 110 TYR n 1 111 LEU n 1 112 GLN n 1 113 MET n 1 114 GLU n 1 115 HIS n 1 116 VAL n 1 117 VAL n 1 118 ASP n 1 119 THR n 1 120 CYS n 1 121 ARG n 1 122 LYS n 1 123 PHE n 1 124 ILE n 1 125 LYS n 1 126 ALA n 1 127 SER n 1 128 GLU n 2 1 ALA n 2 2 TRP n 2 3 VAL n 2 4 ILE n 2 5 PRO n 2 6 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 128 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BCL6, BCL5, LAZ3, ZBTB27, ZNF51' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant AI _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET48b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 6 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NQN non-polymer . '2-chloranyl-4-[[1-methyl-3-[(3~{R})-3-oxidanylbutyl]-2-oxidanylidene-benzimidazol-5-yl]amino]pyridine-3-carbonitrile' ? 'C18 H18 Cl N5 O2' 371.821 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 2 ? ? ? A . n A 1 2 PRO 2 3 ? ? ? A . n A 1 3 GLY 3 4 ? ? ? A . n A 1 4 ALA 4 5 5 ALA ALA A . n A 1 5 ASP 5 6 6 ASP ASP A . n A 1 6 SER 6 7 7 SER SER A . n A 1 7 CYS 7 8 8 CYS CYS A . n A 1 8 ILE 8 9 9 ILE ILE A . n A 1 9 GLN 9 10 10 GLN GLN A . n A 1 10 PHE 10 11 11 PHE PHE A . n A 1 11 THR 11 12 12 THR THR A . n A 1 12 ARG 12 13 13 ARG ARG A . n A 1 13 HIS 13 14 14 HIS HIS A . n A 1 14 ALA 14 15 15 ALA ALA A . n A 1 15 SER 15 16 16 SER SER A . n A 1 16 ASP 16 17 17 ASP ASP A . n A 1 17 VAL 17 18 18 VAL VAL A . n A 1 18 LEU 18 19 19 LEU LEU A . n A 1 19 LEU 19 20 20 LEU LEU A . n A 1 20 ASN 20 21 21 ASN ASN A . n A 1 21 LEU 21 22 22 LEU LEU A . n A 1 22 ASN 22 23 23 ASN ASN A . n A 1 23 ARG 23 24 24 ARG ARG A . n A 1 24 LEU 24 25 25 LEU LEU A . n A 1 25 ARG 25 26 26 ARG ARG A . n A 1 26 SER 26 27 27 SER SER A . n A 1 27 ARG 27 28 28 ARG ARG A . n A 1 28 ASP 28 29 29 ASP ASP A . n A 1 29 ILE 29 30 30 ILE ILE A . n A 1 30 LEU 30 31 31 LEU LEU A . n A 1 31 THR 31 32 32 THR THR A . n A 1 32 ASP 32 33 33 ASP ASP A . n A 1 33 VAL 33 34 34 VAL VAL A . n A 1 34 VAL 34 35 35 VAL VAL A . n A 1 35 ILE 35 36 36 ILE ILE A . n A 1 36 VAL 36 37 37 VAL VAL A . n A 1 37 VAL 37 38 38 VAL VAL A . n A 1 38 SER 38 39 39 SER SER A . n A 1 39 ARG 39 40 40 ARG ARG A . n A 1 40 GLU 40 41 41 GLU GLU A . n A 1 41 GLN 41 42 42 GLN GLN A . n A 1 42 PHE 42 43 43 PHE PHE A . n A 1 43 ARG 43 44 44 ARG ARG A . n A 1 44 ALA 44 45 45 ALA ALA A . n A 1 45 HIS 45 46 46 HIS HIS A . n A 1 46 LYS 46 47 47 LYS LYS A . n A 1 47 THR 47 48 48 THR THR A . n A 1 48 VAL 48 49 49 VAL VAL A . n A 1 49 LEU 49 50 50 LEU LEU A . n A 1 50 MET 50 51 51 MET MET A . n A 1 51 ALA 51 52 52 ALA ALA A . n A 1 52 CYS 52 53 53 CYS CYS A . n A 1 53 SER 53 54 54 SER SER A . n A 1 54 GLY 54 55 55 GLY GLY A . n A 1 55 LEU 55 56 56 LEU LEU A . n A 1 56 PHE 56 57 57 PHE PHE A . n A 1 57 TYR 57 58 58 TYR TYR A . n A 1 58 SER 58 59 59 SER SER A . n A 1 59 ILE 59 60 60 ILE ILE A . n A 1 60 PHE 60 61 61 PHE PHE A . n A 1 61 THR 61 62 62 THR THR A . n A 1 62 ASP 62 63 63 ASP ASP A . n A 1 63 GLN 63 64 64 GLN GLN A . n A 1 64 LEU 64 65 65 LEU LEU A . n A 1 65 LYS 65 66 66 LYS LYS A . n A 1 66 CYS 66 67 67 CYS CYS A . n A 1 67 ASN 67 68 68 ASN ASN A . n A 1 68 LEU 68 69 69 LEU LEU A . n A 1 69 SER 69 70 70 SER SER A . n A 1 70 VAL 70 71 71 VAL VAL A . n A 1 71 ILE 71 72 72 ILE ILE A . n A 1 72 ASN 72 73 73 ASN ASN A . n A 1 73 LEU 73 74 74 LEU LEU A . n A 1 74 ASP 74 75 75 ASP ASP A . n A 1 75 PRO 75 76 76 PRO PRO A . n A 1 76 GLU 76 77 77 GLU GLU A . n A 1 77 ILE 77 78 78 ILE ILE A . n A 1 78 ASN 78 79 79 ASN ASN A . n A 1 79 PRO 79 80 80 PRO PRO A . n A 1 80 GLU 80 81 81 GLU GLU A . n A 1 81 GLY 81 82 82 GLY GLY A . n A 1 82 PHE 82 83 83 PHE PHE A . n A 1 83 CYS 83 84 84 CYS CYS A . n A 1 84 ILE 84 85 85 ILE ILE A . n A 1 85 LEU 85 86 86 LEU LEU A . n A 1 86 LEU 86 87 87 LEU LEU A . n A 1 87 ASP 87 88 88 ASP ASP A . n A 1 88 PHE 88 89 89 PHE PHE A . n A 1 89 MET 89 90 90 MET MET A . n A 1 90 TYR 90 91 91 TYR TYR A . n A 1 91 THR 91 92 92 THR THR A . n A 1 92 SER 92 93 93 SER SER A . n A 1 93 ARG 93 94 94 ARG ARG A . n A 1 94 LEU 94 95 95 LEU LEU A . n A 1 95 ASN 95 96 96 ASN ASN A . n A 1 96 LEU 96 97 97 LEU LEU A . n A 1 97 ARG 97 98 98 ARG ARG A . n A 1 98 GLU 98 99 99 GLU GLU A . n A 1 99 GLY 99 100 100 GLY GLY A . n A 1 100 ASN 100 101 101 ASN ASN A . n A 1 101 ILE 101 102 102 ILE ILE A . n A 1 102 MET 102 103 103 MET MET A . n A 1 103 ALA 103 104 104 ALA ALA A . n A 1 104 VAL 104 105 105 VAL VAL A . n A 1 105 MET 105 106 106 MET MET A . n A 1 106 ALA 106 107 107 ALA ALA A . n A 1 107 THR 107 108 108 THR THR A . n A 1 108 ALA 108 109 109 ALA ALA A . n A 1 109 MET 109 110 110 MET MET A . n A 1 110 TYR 110 111 111 TYR TYR A . n A 1 111 LEU 111 112 112 LEU LEU A . n A 1 112 GLN 112 113 113 GLN GLN A . n A 1 113 MET 113 114 114 MET MET A . n A 1 114 GLU 114 115 115 GLU GLU A . n A 1 115 HIS 115 116 116 HIS HIS A . n A 1 116 VAL 116 117 117 VAL VAL A . n A 1 117 VAL 117 118 118 VAL VAL A . n A 1 118 ASP 118 119 119 ASP ASP A . n A 1 119 THR 119 120 120 THR THR A . n A 1 120 CYS 120 121 121 CYS CYS A . n A 1 121 ARG 121 122 122 ARG ARG A . n A 1 122 LYS 122 123 123 LYS LYS A . n A 1 123 PHE 123 124 124 PHE PHE A . n A 1 124 ILE 124 125 125 ILE ILE A . n A 1 125 LYS 125 126 126 LYS LYS A . n A 1 126 ALA 126 127 127 ALA ALA A . n A 1 127 SER 127 128 128 SER SER A . n A 1 128 GLU 128 129 129 GLU GLU A . n B 2 1 ALA 1 0 0 ALA ALA B . n B 2 2 TRP 2 1 1 TRP TRP B . n B 2 3 VAL 3 2 2 VAL VAL B . n B 2 4 ILE 4 3 3 ILE ILE B . n B 2 5 PRO 5 4 4 PRO PRO B . n B 2 6 ALA 6 5 5 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NQN 1 201 200 NQN 357 A . D 4 EDO 1 202 1 EDO EDO A . E 4 EDO 1 203 3 EDO EDO A . F 4 EDO 1 204 4 EDO EDO A . G 4 EDO 1 205 5 EDO EDO A . H 5 DMS 1 206 1 DMS DMS A . I 5 DMS 1 207 2 DMS DMS A . J 4 EDO 1 101 2 EDO EDO B . K 6 HOH 1 301 156 HOH HOH A . K 6 HOH 2 302 79 HOH HOH A . K 6 HOH 3 303 13 HOH HOH A . K 6 HOH 4 304 22 HOH HOH A . K 6 HOH 5 305 142 HOH HOH A . K 6 HOH 6 306 146 HOH HOH A . K 6 HOH 7 307 6 HOH HOH A . K 6 HOH 8 308 122 HOH HOH A . K 6 HOH 9 309 144 HOH HOH A . K 6 HOH 10 310 160 HOH HOH A . K 6 HOH 11 311 40 HOH HOH A . K 6 HOH 12 312 151 HOH HOH A . K 6 HOH 13 313 30 HOH HOH A . K 6 HOH 14 314 165 HOH HOH A . K 6 HOH 15 315 27 HOH HOH A . K 6 HOH 16 316 58 HOH HOH A . K 6 HOH 17 317 166 HOH HOH A . K 6 HOH 18 318 89 HOH HOH A . K 6 HOH 19 319 96 HOH HOH A . K 6 HOH 20 320 143 HOH HOH A . K 6 HOH 21 321 102 HOH HOH A . K 6 HOH 22 322 83 HOH HOH A . K 6 HOH 23 323 138 HOH HOH A . K 6 HOH 24 324 21 HOH HOH A . K 6 HOH 25 325 25 HOH HOH A . K 6 HOH 26 326 152 HOH HOH A . K 6 HOH 27 327 95 HOH HOH A . K 6 HOH 28 328 55 HOH HOH A . K 6 HOH 29 329 50 HOH HOH A . K 6 HOH 30 330 15 HOH HOH A . K 6 HOH 31 331 33 HOH HOH A . K 6 HOH 32 332 16 HOH HOH A . K 6 HOH 33 333 168 HOH HOH A . K 6 HOH 34 334 191 HOH HOH A . K 6 HOH 35 335 12 HOH HOH A . K 6 HOH 36 336 148 HOH HOH A . K 6 HOH 37 337 119 HOH HOH A . K 6 HOH 38 338 1 HOH HOH A . K 6 HOH 39 339 149 HOH HOH A . K 6 HOH 40 340 23 HOH HOH A . K 6 HOH 41 341 92 HOH HOH A . K 6 HOH 42 342 3 HOH HOH A . K 6 HOH 43 343 24 HOH HOH A . K 6 HOH 44 344 5 HOH HOH A . K 6 HOH 45 345 2 HOH HOH A . K 6 HOH 46 346 67 HOH HOH A . K 6 HOH 47 347 38 HOH HOH A . K 6 HOH 48 348 94 HOH HOH A . K 6 HOH 49 349 93 HOH HOH A . K 6 HOH 50 350 14 HOH HOH A . K 6 HOH 51 351 129 HOH HOH A . K 6 HOH 52 352 73 HOH HOH A . K 6 HOH 53 353 141 HOH HOH A . K 6 HOH 54 354 52 HOH HOH A . K 6 HOH 55 355 4 HOH HOH A . K 6 HOH 56 356 91 HOH HOH A . K 6 HOH 57 357 37 HOH HOH A . K 6 HOH 58 358 64 HOH HOH A . K 6 HOH 59 359 188 HOH HOH A . K 6 HOH 60 360 20 HOH HOH A . K 6 HOH 61 361 9 HOH HOH A . K 6 HOH 62 362 11 HOH HOH A . K 6 HOH 63 363 70 HOH HOH A . K 6 HOH 64 364 90 HOH HOH A . K 6 HOH 65 365 56 HOH HOH A . K 6 HOH 66 366 42 HOH HOH A . K 6 HOH 67 367 192 HOH HOH A . K 6 HOH 68 368 153 HOH HOH A . K 6 HOH 69 369 147 HOH HOH A . K 6 HOH 70 370 34 HOH HOH A . K 6 HOH 71 371 28 HOH HOH A . K 6 HOH 72 372 161 HOH HOH A . K 6 HOH 73 373 74 HOH HOH A . K 6 HOH 74 374 162 HOH HOH A . K 6 HOH 75 375 35 HOH HOH A . K 6 HOH 76 376 195 HOH HOH A . K 6 HOH 77 377 7 HOH HOH A . K 6 HOH 78 378 65 HOH HOH A . K 6 HOH 79 379 145 HOH HOH A . K 6 HOH 80 380 97 HOH HOH A . K 6 HOH 81 381 61 HOH HOH A . K 6 HOH 82 382 32 HOH HOH A . K 6 HOH 83 383 36 HOH HOH A . K 6 HOH 84 384 19 HOH HOH A . K 6 HOH 85 385 48 HOH HOH A . K 6 HOH 86 386 154 HOH HOH A . K 6 HOH 87 387 72 HOH HOH A . K 6 HOH 88 388 134 HOH HOH A . K 6 HOH 89 389 41 HOH HOH A . K 6 HOH 90 390 197 HOH HOH A . K 6 HOH 91 391 8 HOH HOH A . K 6 HOH 92 392 17 HOH HOH A . K 6 HOH 93 393 169 HOH HOH A . K 6 HOH 94 394 51 HOH HOH A . K 6 HOH 95 395 45 HOH HOH A . K 6 HOH 96 396 77 HOH HOH A . K 6 HOH 97 397 71 HOH HOH A . K 6 HOH 98 398 201 HOH HOH A . K 6 HOH 99 399 200 HOH HOH A . K 6 HOH 100 400 18 HOH HOH A . K 6 HOH 101 401 63 HOH HOH A . K 6 HOH 102 402 26 HOH HOH A . K 6 HOH 103 403 86 HOH HOH A . K 6 HOH 104 404 46 HOH HOH A . K 6 HOH 105 405 106 HOH HOH A . K 6 HOH 106 406 31 HOH HOH A . K 6 HOH 107 407 180 HOH HOH A . K 6 HOH 108 408 49 HOH HOH A . K 6 HOH 109 409 183 HOH HOH A . K 6 HOH 110 410 10 HOH HOH A . K 6 HOH 111 411 100 HOH HOH A . K 6 HOH 112 412 190 HOH HOH A . K 6 HOH 113 413 47 HOH HOH A . K 6 HOH 114 414 163 HOH HOH A . K 6 HOH 115 415 126 HOH HOH A . K 6 HOH 116 416 39 HOH HOH A . K 6 HOH 117 417 120 HOH HOH A . K 6 HOH 118 418 60 HOH HOH A . K 6 HOH 119 419 85 HOH HOH A . K 6 HOH 120 420 178 HOH HOH A . K 6 HOH 121 421 182 HOH HOH A . K 6 HOH 122 422 198 HOH HOH A . K 6 HOH 123 423 98 HOH HOH A . K 6 HOH 124 424 196 HOH HOH A . K 6 HOH 125 425 171 HOH HOH A . K 6 HOH 126 426 181 HOH HOH A . K 6 HOH 127 427 170 HOH HOH A . K 6 HOH 128 428 99 HOH HOH A . K 6 HOH 129 429 111 HOH HOH A . K 6 HOH 130 430 174 HOH HOH A . K 6 HOH 131 431 59 HOH HOH A . K 6 HOH 132 432 193 HOH HOH A . K 6 HOH 133 433 157 HOH HOH A . K 6 HOH 134 434 76 HOH HOH A . K 6 HOH 135 435 179 HOH HOH A . K 6 HOH 136 436 82 HOH HOH A . K 6 HOH 137 437 68 HOH HOH A . K 6 HOH 138 438 66 HOH HOH A . K 6 HOH 139 439 155 HOH HOH A . K 6 HOH 140 440 184 HOH HOH A . K 6 HOH 141 441 189 HOH HOH A . K 6 HOH 142 442 199 HOH HOH A . K 6 HOH 143 443 185 HOH HOH A . K 6 HOH 144 444 187 HOH HOH A . K 6 HOH 145 445 186 HOH HOH A . K 6 HOH 146 446 176 HOH HOH A . K 6 HOH 147 447 172 HOH HOH A . K 6 HOH 148 448 177 HOH HOH A . L 6 HOH 1 201 103 HOH HOH B . L 6 HOH 2 202 44 HOH HOH B . L 6 HOH 3 203 175 HOH HOH B . L 6 HOH 4 204 54 HOH HOH B . L 6 HOH 5 205 80 HOH HOH B . L 6 HOH 6 206 69 HOH HOH B . L 6 HOH 7 207 173 HOH HOH B . L 6 HOH 8 208 159 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 6 ? CG ? A ASP 5 CG 2 1 Y 1 A ASP 6 ? OD1 ? A ASP 5 OD1 3 1 Y 1 A ASP 6 ? OD2 ? A ASP 5 OD2 4 1 Y 1 A ARG 13 ? NE ? A ARG 12 NE 5 1 Y 1 A ARG 13 ? CZ ? A ARG 12 CZ 6 1 Y 1 A ARG 13 ? NH1 ? A ARG 12 NH1 7 1 Y 1 A ARG 13 ? NH2 ? A ARG 12 NH2 8 1 Y 1 A GLU 41 ? OE1 ? A GLU 40 OE1 9 1 Y 1 A GLU 41 ? OE2 ? A GLU 40 OE2 10 1 Y 1 A GLU 77 ? CD ? A GLU 76 CD 11 1 Y 1 A GLU 77 ? OE1 ? A GLU 76 OE1 12 1 Y 1 A GLU 77 ? OE2 ? A GLU 76 OE2 13 1 Y 1 A ARG 94 ? NH1 ? A ARG 93 NH1 14 1 Y 1 A GLU 99 ? CD ? A GLU 98 CD 15 1 Y 1 A GLU 99 ? OE1 ? A GLU 98 OE1 16 1 Y 1 A GLU 99 ? OE2 ? A GLU 98 OE2 17 1 Y 1 A LYS 123 ? CD ? A LYS 122 CD 18 1 Y 1 A LYS 123 ? CE ? A LYS 122 CE 19 1 Y 1 A LYS 123 ? NZ ? A LYS 122 NZ 20 1 Y 1 A LYS 126 ? CD ? A LYS 125 CD 21 1 Y 1 A LYS 126 ? CE ? A LYS 125 CE 22 1 Y 1 A LYS 126 ? NZ ? A LYS 125 NZ 23 1 Y 1 A GLU 129 ? O ? A GLU 128 O 24 1 Y 1 B ALA 0 ? N ? B ALA 1 N 25 1 Y 1 B ALA 0 ? CB ? B ALA 1 CB 26 1 Y 1 B ALA 5 ? CA ? B ALA 6 CA 27 1 Y 1 B ALA 5 ? C ? B ALA 6 C 28 1 Y 1 B ALA 5 ? O ? B ALA 6 O 29 1 Y 1 B ALA 5 ? CB ? B ALA 6 CB # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.3 1 ? 'data reduction' ? ? 'Wolfgang Kabsch' Wolfgang.Kabsch@mpimf-heidelberg.mpg.de ? ? ? ? ? http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/ ? XDS ? ? package . 2 ? 'data scaling' ? ? 'Phil Evans' ? ? ? ? ? ? http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? Aimless ? ? program . 3 ? phasing ? ? 'Randy J. Read' cimr-phaser@lists.cam.ac.uk ? ? ? ? ? http://www-structmed.cimr.cam.ac.uk/phaser/ ? PHASER ? ? program . 4 ? 'data extraction' ? ? PDB deposit@deposit.rcsb.org 'Sep. 1, 2017' ? ? ? C++ http://sw-tools.pdb.org/apps/PDB_EXTRACT/ ? PDB_EXTRACT ? ? package 3.24 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 6TOI _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.660 _cell.length_a_esd ? _cell.length_b 67.660 _cell.length_b_esd ? _cell.length_c 166.640 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6TOI _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6TOI _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.62 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 66.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;2 microliter of the BCL6-BTB/WVIP complex at 4 mg/mL plus 1 microliter of a crystallisation solution consisting of 1 M K2HPO4, 0.7 M NaH2PO4, 75 mM sodium acetate buffer pH 4.5 and 2 % DMSO, against 350 microliter of crystallisation solution. ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 2M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-08-27 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9660 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE MASSIF-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9660 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline MASSIF-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.B_iso_Wilson_estimate 22.060 _reflns.entry_id 6TOI _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.580 _reflns.d_resolution_low 55.278 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 31728 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 12.400 _reflns.pdbx_Rmerge_I_obs 0.091 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.096 _reflns.pdbx_Rpim_I_all 0.027 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split 1.580 1.608 ? ? ? ? ? ? 1556 99.500 ? ? ? ? 0.769 ? ? ? ? ? ? ? ? 11.900 ? ? ? ? 0.807 0.231 ? 1 1 0.352 ? ? 4.291 55.278 ? ? ? ? ? ? 1773 98.600 ? ? ? ? 0.039 ? ? ? ? ? ? ? ? 10.700 ? ? ? ? 0.041 0.013 ? 2 1 0.999 ? ? # _refine.aniso_B[1][1] 1.1047 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] 1.1047 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] -2.2093 _refine.B_iso_max 90.770 _refine.B_iso_mean 29.5400 _refine.B_iso_min 3.790 _refine.correlation_coeff_Fo_to_Fc 0.9660 _refine.correlation_coeff_Fo_to_Fc_free 0.9560 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6TOI _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.580 _refine.ls_d_res_low 20.5700 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 31707 _refine.ls_number_reflns_R_free 1539 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9000 _refine.ls_percent_reflns_R_free 4.8500 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1640 _refine.ls_R_factor_R_free 0.1840 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1630 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3BIM _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.0590 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.0640 _refine.pdbx_overall_SU_R_Blow_DPI 0.0630 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.0580 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 6TOI _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.200 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.580 _refine_hist.d_res_low 20.5700 _refine_hist.number_atoms_solvent 163 _refine_hist.number_atoms_total 1231 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 131 _refine_hist.pdbx_B_iso_mean_ligand 35.85 _refine_hist.pdbx_B_iso_mean_solvent 47.17 _refine_hist.pdbx_number_atoms_protein 1014 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 54 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? ? ? 419 ? t_dihedral_angle_d 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_trig_c_planes ? ? 'X-RAY DIFFRACTION' ? ? ? 224 ? t_gen_planes 5.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1197 ? t_it 20.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 160 ? t_chiral_improper_torsion 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? 18 ? t_sum_occupancies 1.000 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 1610 ? t_ideal_dist_contact 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 0.010 ? 1197 ? t_bond_d 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 1.030 ? 1626 ? t_angle_deg 2.000 HARMONIC 'X-RAY DIFFRACTION' ? 3.700 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 14.080 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.5800 _refine_ls_shell.d_res_low 1.5900 _refine_ls_shell.number_reflns_all 635 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 33 _refine_ls_shell.number_reflns_R_work 602 _refine_ls_shell.percent_reflns_obs 98.5800 _refine_ls_shell.percent_reflns_R_free 5.2000 _refine_ls_shell.R_factor_all 0.2682 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2815 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2674 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 50 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6TOI _struct.title 'Crystal structure of human BCL6 BTB domain in complex with compound 11f' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6TOI _struct_keywords.text 'Cancer, Lymphoma, Inhibitor, Degrader, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 5 ? J N N 4 ? K N N 6 ? L N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP BCL6_HUMAN P41182 ? 1 ;ADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFC ILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASE ; 5 2 PDB 6TOI 6TOI ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6TOI A 4 ? 128 ? P41182 5 ? 129 ? 5 129 2 2 6TOI B 1 ? 6 ? 6TOI 0 ? 5 ? 0 5 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6TOI GLY A 1 ? UNP P41182 ? ? 'expression tag' 2 1 1 6TOI PRO A 2 ? UNP P41182 ? ? 'expression tag' 3 2 1 6TOI GLY A 3 ? UNP P41182 ? ? 'expression tag' 4 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7250 ? 1 MORE -32 ? 1 'SSA (A^2)' 13860 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_545 x,x-y-1,-z+1/6 0.5000000000 0.8660254038 0.0000000000 33.8300000000 0.8660254038 -0.5000000000 0.0000000000 -58.5952788201 0.0000000000 0.0000000000 -1.0000000000 27.7733333333 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 12 ? ARG A 27 ? ARG A 13 ARG A 28 1 ? 16 HELX_P HELX_P2 AA2 HIS A 45 ? SER A 53 ? HIS A 46 SER A 54 1 ? 9 HELX_P HELX_P3 AA3 SER A 53 ? THR A 61 ? SER A 54 THR A 62 1 ? 9 HELX_P HELX_P4 AA4 LEU A 64 ? LEU A 68 ? LEU A 65 LEU A 69 5 ? 5 HELX_P HELX_P5 AA5 ASN A 78 ? SER A 92 ? ASN A 79 SER A 93 1 ? 15 HELX_P HELX_P6 AA6 ASN A 100 ? GLN A 112 ? ASN A 101 GLN A 113 1 ? 13 HELX_P HELX_P7 AA7 MET A 113 ? SER A 127 ? MET A 114 SER A 128 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 9 ? PHE A 10 ? GLN A 10 PHE A 11 AA1 2 TRP B 2 ? VAL B 3 ? TRP B 1 VAL B 2 AA2 1 GLU A 40 ? ALA A 44 ? GLU A 41 ALA A 45 AA2 2 VAL A 33 ? VAL A 37 ? VAL A 34 VAL A 38 AA2 3 VAL A 70 ? ASN A 72 ? VAL A 71 ASN A 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 9 ? N GLN A 10 O VAL B 3 ? O VAL B 2 AA2 1 2 O PHE A 42 ? O PHE A 43 N ILE A 35 ? N ILE A 36 AA2 2 3 N VAL A 36 ? N VAL A 37 O ILE A 71 ? O ILE A 72 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NQN 201 ? 16 'binding site for residue NQN A 201' AC2 Software A EDO 202 ? 4 'binding site for residue EDO A 202' AC3 Software A EDO 203 ? 2 'binding site for residue EDO A 203' AC4 Software A EDO 204 ? 3 'binding site for residue EDO A 204' AC5 Software A EDO 205 ? 3 'binding site for residue EDO A 205' AC6 Software A DMS 206 ? 4 'binding site for residue DMS A 206' AC7 Software B EDO 101 ? 5 'binding site for residue EDO B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 ASP A 16 ? ASP A 17 . ? 12_545 ? 2 AC1 16 ASN A 20 ? ASN A 21 . ? 12_545 ? 3 AC1 16 ARG A 23 ? ARG A 24 . ? 12_545 ? 4 AC1 16 LEU A 24 ? LEU A 25 . ? 12_545 ? 5 AC1 16 MET A 50 ? MET A 51 . ? 1_555 ? 6 AC1 16 ALA A 51 ? ALA A 52 . ? 1_555 ? 7 AC1 16 CYS A 52 ? CYS A 53 . ? 1_555 ? 8 AC1 16 GLY A 54 ? GLY A 55 . ? 1_555 ? 9 AC1 16 TYR A 57 ? TYR A 58 . ? 1_555 ? 10 AC1 16 GLN A 112 ? GLN A 113 . ? 1_555 ? 11 AC1 16 MET A 113 ? MET A 114 . ? 1_555 ? 12 AC1 16 GLU A 114 ? GLU A 115 . ? 1_555 ? 13 AC1 16 HIS A 115 ? HIS A 116 . ? 1_555 ? 14 AC1 16 HOH K . ? HOH A 303 . ? 1_555 ? 15 AC1 16 HOH K . ? HOH A 350 . ? 1_555 ? 16 AC1 16 HOH K . ? HOH A 364 . ? 12_545 ? 17 AC2 4 ASP A 62 ? ASP A 63 . ? 7_545 ? 18 AC2 4 GLN A 63 ? GLN A 64 . ? 7_545 ? 19 AC2 4 ARG A 97 ? ARG A 98 . ? 1_555 ? 20 AC2 4 GLU A 98 ? GLU A 99 . ? 1_555 ? 21 AC3 2 HOH K . ? HOH A 359 . ? 1_555 ? 22 AC3 2 ALA B 6 ? ALA B 5 . ? 6_555 ? 23 AC4 3 LEU A 64 ? LEU A 65 . ? 7_545 ? 24 AC4 3 GLU A 98 ? GLU A 99 . ? 1_555 ? 25 AC4 3 SER A 127 ? SER A 128 . ? 1_555 ? 26 AC5 3 PRO A 75 ? PRO A 76 . ? 11_655 ? 27 AC5 3 PRO A 75 ? PRO A 76 . ? 1_555 ? 28 AC5 3 HOH K . ? HOH A 302 . ? 1_555 ? 29 AC6 4 VAL A 36 ? VAL A 37 . ? 1_555 ? 30 AC6 4 GLN A 41 ? GLN A 42 . ? 1_555 ? 31 AC6 4 VAL A 70 ? VAL A 71 . ? 1_555 ? 32 AC6 4 HOH K . ? HOH A 321 . ? 1_555 ? 33 AC7 5 ILE A 71 ? ILE A 72 . ? 5_554 ? 34 AC7 5 ASN A 72 ? ASN A 73 . ? 5_554 ? 35 AC7 5 PHE A 123 ? PHE A 124 . ? 12_545 ? 36 AC7 5 TRP B 2 ? TRP B 1 . ? 1_555 ? 37 AC7 5 HOH L . ? HOH B 203 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 31 ? ? 59.38 19.77 2 1 SER A 39 ? A 62.00 -127.46 3 1 SER A 93 ? A 78.17 -2.13 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 310 ? K HOH . 2 1 A HOH 372 ? K HOH . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 28.3700 -27.8057 11.6368 -0.0287 ? -0.0196 ? 0.0078 ? -0.0149 ? -0.0198 ? -0.1158 ? 3.9618 ? 0.4816 ? 2.6737 ? 1.6776 ? 1.1898 ? 5.7241 ? 0.0493 ? 0.0070 ? -0.1069 ? 0.1623 ? -0.0574 ? 0.0191 ? 0.2705 ? -0.3300 ? 0.0081 ? 2 'X-RAY DIFFRACTION' ? refined 41.1968 -15.2835 27.8614 0.2048 ? -0.0342 ? -0.0487 ? 0.2271 ? -0.0407 ? 0.1184 ? 0.5125 ? 0.1467 ? 0.9435 ? 3.9069 ? 0.4318 ? 2.8865 ? 0.1449 ? -0.0385 ? 0.0711 ? 0.2788 ? 0.0749 ? -0.4096 ? -0.1867 ? 0.1906 ? -0.2198 ? 3 'X-RAY DIFFRACTION' ? refined 39.6643 -15.9809 28.5244 -0.1511 ? -0.0096 ? -0.0478 ? -0.1939 ? -0.0272 ? -0.3040 ? 0.8165 ? 0.2994 ? 1.3679 ? 0.7998 ? 0.7565 ? 1.4599 ? -0.0738 ? -0.1694 ? 0.0128 ? 0.4237 ? 0.0848 ? -0.0511 ? -0.1514 ? 0.1913 ? -0.0110 ? 4 'X-RAY DIFFRACTION' ? refined 33.2622 -10.4784 24.1227 0.0269 ? -0.0283 ? 0.0187 ? -0.0328 ? -0.0127 ? -0.0810 ? 1.2871 ? 1.2558 ? -0.1275 ? 2.9471 ? 0.9454 ? 2.0752 ? 0.1027 ? -0.0029 ? 0.0826 ? 0.1130 ? 0.0008 ? -0.0624 ? -0.1997 ? 0.0629 ? -0.1035 ? 5 'X-RAY DIFFRACTION' ? refined 22.3282 -22.7554 32.5993 0.1550 ? -0.0929 ? 0.0524 ? 0.0657 ? -0.0107 ? -0.0605 ? 1.9535 ? 1.2632 ? -0.5541 ? 1.6664 ? -1.4450 ? 1.4735 ? 0.1012 ? -0.2956 ? -0.0095 ? 0.3356 ? -0.2160 ? 0.1884 ? 0.0279 ? 0.1842 ? 0.1147 ? 6 'X-RAY DIFFRACTION' ? refined 23.4197 -10.5158 31.0151 0.0123 ? -0.0325 ? 0.0657 ? -0.0601 ? -0.0552 ? -0.0879 ? 3.7405 ? 3.4597 ? -0.9914 ? 6.4669 ? -0.8866 ? 5.4883 ? 0.2516 ? -0.2058 ? 0.3293 ? 0.4967 ? -0.2748 ? 0.4081 ? -0.2620 ? -0.3266 ? 0.0232 ? 7 'X-RAY DIFFRACTION' ? refined 13.6496 -15.0230 31.2656 0.0261 ? -0.0579 ? 0.0956 ? 0.0595 ? -0.1026 ? 0.0230 ? 7.7775 ? 0.2929 ? -1.8542 ? 8.6056 ? 0.2583 ? 0.0164 ? -0.0693 ? 0.0839 ? 0.2077 ? 0.4382 ? -0.1820 ? 0.7287 ? 0.1889 ? -0.4140 ? 0.2512 ? 8 'X-RAY DIFFRACTION' ? refined 19.2167 -32.5148 2.1249 -0.0596 ? -0.0519 ? -0.0132 ? 0.1280 ? -0.0315 ? -0.0659 ? 2.6402 ? 0.9467 ? 1.1387 ? 0.6717 ? 3.6942 ? 1.1591 ? 0.0967 ? -0.0500 ? -0.0477 ? -0.0990 ? 0.0572 ? 0.0750 ? 0.0747 ? -0.0494 ? -0.1539 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 5 ? ? A 27 ? '{A|5 - 27}' 2 'X-RAY DIFFRACTION' 2 ? ? A 28 ? ? A 40 ? '{A|28 - 40}' 3 'X-RAY DIFFRACTION' 3 ? ? A 41 ? ? A 46 ? '{A|41 - 46}' 4 'X-RAY DIFFRACTION' 4 ? ? A 47 ? ? A 92 ? '{A|47 - 92}' 5 'X-RAY DIFFRACTION' 5 ? ? A 93 ? ? A 101 ? '{A|93 - 101}' 6 'X-RAY DIFFRACTION' 6 ? ? A 102 ? ? A 114 ? '{A|102 - 114}' 7 'X-RAY DIFFRACTION' 7 ? ? A 115 ? ? A 129 ? '{A|115 - 129}' 8 'X-RAY DIFFRACTION' 8 ? ? B 0 ? ? B 5 ? '{B|0 - 5}' # _phasing.method MR # _pdbx_entry_details.entry_id 6TOI _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 448 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.35 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 2 ? A GLY 1 2 1 Y 1 A PRO 3 ? A PRO 2 3 1 Y 1 A GLY 4 ? A GLY 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DMS S S N N 88 DMS O O N N 89 DMS C1 C N N 90 DMS C2 C N N 91 DMS H11 H N N 92 DMS H12 H N N 93 DMS H13 H N N 94 DMS H21 H N N 95 DMS H22 H N N 96 DMS H23 H N N 97 EDO C1 C N N 98 EDO O1 O N N 99 EDO C2 C N N 100 EDO O2 O N N 101 EDO H11 H N N 102 EDO H12 H N N 103 EDO HO1 H N N 104 EDO H21 H N N 105 EDO H22 H N N 106 EDO HO2 H N N 107 GLN N N N N 108 GLN CA C N S 109 GLN C C N N 110 GLN O O N N 111 GLN CB C N N 112 GLN CG C N N 113 GLN CD C N N 114 GLN OE1 O N N 115 GLN NE2 N N N 116 GLN OXT O N N 117 GLN H H N N 118 GLN H2 H N N 119 GLN HA H N N 120 GLN HB2 H N N 121 GLN HB3 H N N 122 GLN HG2 H N N 123 GLN HG3 H N N 124 GLN HE21 H N N 125 GLN HE22 H N N 126 GLN HXT H N N 127 GLU N N N N 128 GLU CA C N S 129 GLU C C N N 130 GLU O O N N 131 GLU CB C N N 132 GLU CG C N N 133 GLU CD C N N 134 GLU OE1 O N N 135 GLU OE2 O N N 136 GLU OXT O N N 137 GLU H H N N 138 GLU H2 H N N 139 GLU HA H N N 140 GLU HB2 H N N 141 GLU HB3 H N N 142 GLU HG2 H N N 143 GLU HG3 H N N 144 GLU HE2 H N N 145 GLU HXT H N N 146 GLY N N N N 147 GLY CA C N N 148 GLY C C N N 149 GLY O O N N 150 GLY OXT O N N 151 GLY H H N N 152 GLY H2 H N N 153 GLY HA2 H N N 154 GLY HA3 H N N 155 GLY HXT H N N 156 HIS N N N N 157 HIS CA C N S 158 HIS C C N N 159 HIS O O N N 160 HIS CB C N N 161 HIS CG C Y N 162 HIS ND1 N Y N 163 HIS CD2 C Y N 164 HIS CE1 C Y N 165 HIS NE2 N Y N 166 HIS OXT O N N 167 HIS H H N N 168 HIS H2 H N N 169 HIS HA H N N 170 HIS HB2 H N N 171 HIS HB3 H N N 172 HIS HD1 H N N 173 HIS HD2 H N N 174 HIS HE1 H N N 175 HIS HE2 H N N 176 HIS HXT H N N 177 HOH O O N N 178 HOH H1 H N N 179 HOH H2 H N N 180 ILE N N N N 181 ILE CA C N S 182 ILE C C N N 183 ILE O O N N 184 ILE CB C N S 185 ILE CG1 C N N 186 ILE CG2 C N N 187 ILE CD1 C N N 188 ILE OXT O N N 189 ILE H H N N 190 ILE H2 H N N 191 ILE HA H N N 192 ILE HB H N N 193 ILE HG12 H N N 194 ILE HG13 H N N 195 ILE HG21 H N N 196 ILE HG22 H N N 197 ILE HG23 H N N 198 ILE HD11 H N N 199 ILE HD12 H N N 200 ILE HD13 H N N 201 ILE HXT H N N 202 LEU N N N N 203 LEU CA C N S 204 LEU C C N N 205 LEU O O N N 206 LEU CB C N N 207 LEU CG C N N 208 LEU CD1 C N N 209 LEU CD2 C N N 210 LEU OXT O N N 211 LEU H H N N 212 LEU H2 H N N 213 LEU HA H N N 214 LEU HB2 H N N 215 LEU HB3 H N N 216 LEU HG H N N 217 LEU HD11 H N N 218 LEU HD12 H N N 219 LEU HD13 H N N 220 LEU HD21 H N N 221 LEU HD22 H N N 222 LEU HD23 H N N 223 LEU HXT H N N 224 LYS N N N N 225 LYS CA C N S 226 LYS C C N N 227 LYS O O N N 228 LYS CB C N N 229 LYS CG C N N 230 LYS CD C N N 231 LYS CE C N N 232 LYS NZ N N N 233 LYS OXT O N N 234 LYS H H N N 235 LYS H2 H N N 236 LYS HA H N N 237 LYS HB2 H N N 238 LYS HB3 H N N 239 LYS HG2 H N N 240 LYS HG3 H N N 241 LYS HD2 H N N 242 LYS HD3 H N N 243 LYS HE2 H N N 244 LYS HE3 H N N 245 LYS HZ1 H N N 246 LYS HZ2 H N N 247 LYS HZ3 H N N 248 LYS HXT H N N 249 MET N N N N 250 MET CA C N S 251 MET C C N N 252 MET O O N N 253 MET CB C N N 254 MET CG C N N 255 MET SD S N N 256 MET CE C N N 257 MET OXT O N N 258 MET H H N N 259 MET H2 H N N 260 MET HA H N N 261 MET HB2 H N N 262 MET HB3 H N N 263 MET HG2 H N N 264 MET HG3 H N N 265 MET HE1 H N N 266 MET HE2 H N N 267 MET HE3 H N N 268 MET HXT H N N 269 NQN C2 C Y N 270 NQN C3 C Y N 271 NQN C4 C Y N 272 NQN C5 C Y N 273 NQN C10 C Y N 274 NQN C11 C N N 275 NQN C6 C Y N 276 NQN C7 C Y N 277 NQN N1 N N N 278 NQN CL CL N N 279 NQN C1 C Y N 280 NQN N N Y N 281 NQN C17 C N N 282 NQN N4 N N N 283 NQN C C Y N 284 NQN C9 C Y N 285 NQN N2 N N N 286 NQN C13 C N N 287 NQN C14 C N N 288 NQN C15 C N R 289 NQN O1 O N N 290 NQN C16 C N N 291 NQN O O N N 292 NQN N3 N N N 293 NQN C12 C N N 294 NQN C8 C Y N 295 NQN H1 H N N 296 NQN H2 H N N 297 NQN H3 H N N 298 NQN H4 H N N 299 NQN H5 H N N 300 NQN H6 H N N 301 NQN H7 H N N 302 NQN H8 H N N 303 NQN H9 H N N 304 NQN H10 H N N 305 NQN H11 H N N 306 NQN H12 H N N 307 NQN H13 H N N 308 NQN H14 H N N 309 NQN H15 H N N 310 NQN H16 H N N 311 NQN H17 H N N 312 NQN H18 H N N 313 PHE N N N N 314 PHE CA C N S 315 PHE C C N N 316 PHE O O N N 317 PHE CB C N N 318 PHE CG C Y N 319 PHE CD1 C Y N 320 PHE CD2 C Y N 321 PHE CE1 C Y N 322 PHE CE2 C Y N 323 PHE CZ C Y N 324 PHE OXT O N N 325 PHE H H N N 326 PHE H2 H N N 327 PHE HA H N N 328 PHE HB2 H N N 329 PHE HB3 H N N 330 PHE HD1 H N N 331 PHE HD2 H N N 332 PHE HE1 H N N 333 PHE HE2 H N N 334 PHE HZ H N N 335 PHE HXT H N N 336 PRO N N N N 337 PRO CA C N S 338 PRO C C N N 339 PRO O O N N 340 PRO CB C N N 341 PRO CG C N N 342 PRO CD C N N 343 PRO OXT O N N 344 PRO H H N N 345 PRO HA H N N 346 PRO HB2 H N N 347 PRO HB3 H N N 348 PRO HG2 H N N 349 PRO HG3 H N N 350 PRO HD2 H N N 351 PRO HD3 H N N 352 PRO HXT H N N 353 SER N N N N 354 SER CA C N S 355 SER C C N N 356 SER O O N N 357 SER CB C N N 358 SER OG O N N 359 SER OXT O N N 360 SER H H N N 361 SER H2 H N N 362 SER HA H N N 363 SER HB2 H N N 364 SER HB3 H N N 365 SER HG H N N 366 SER HXT H N N 367 THR N N N N 368 THR CA C N S 369 THR C C N N 370 THR O O N N 371 THR CB C N R 372 THR OG1 O N N 373 THR CG2 C N N 374 THR OXT O N N 375 THR H H N N 376 THR H2 H N N 377 THR HA H N N 378 THR HB H N N 379 THR HG1 H N N 380 THR HG21 H N N 381 THR HG22 H N N 382 THR HG23 H N N 383 THR HXT H N N 384 TRP N N N N 385 TRP CA C N S 386 TRP C C N N 387 TRP O O N N 388 TRP CB C N N 389 TRP CG C Y N 390 TRP CD1 C Y N 391 TRP CD2 C Y N 392 TRP NE1 N Y N 393 TRP CE2 C Y N 394 TRP CE3 C Y N 395 TRP CZ2 C Y N 396 TRP CZ3 C Y N 397 TRP CH2 C Y N 398 TRP OXT O N N 399 TRP H H N N 400 TRP H2 H N N 401 TRP HA H N N 402 TRP HB2 H N N 403 TRP HB3 H N N 404 TRP HD1 H N N 405 TRP HE1 H N N 406 TRP HE3 H N N 407 TRP HZ2 H N N 408 TRP HZ3 H N N 409 TRP HH2 H N N 410 TRP HXT H N N 411 TYR N N N N 412 TYR CA C N S 413 TYR C C N N 414 TYR O O N N 415 TYR CB C N N 416 TYR CG C Y N 417 TYR CD1 C Y N 418 TYR CD2 C Y N 419 TYR CE1 C Y N 420 TYR CE2 C Y N 421 TYR CZ C Y N 422 TYR OH O N N 423 TYR OXT O N N 424 TYR H H N N 425 TYR H2 H N N 426 TYR HA H N N 427 TYR HB2 H N N 428 TYR HB3 H N N 429 TYR HD1 H N N 430 TYR HD2 H N N 431 TYR HE1 H N N 432 TYR HE2 H N N 433 TYR HH H N N 434 TYR HXT H N N 435 VAL N N N N 436 VAL CA C N S 437 VAL C C N N 438 VAL O O N N 439 VAL CB C N N 440 VAL CG1 C N N 441 VAL CG2 C N N 442 VAL OXT O N N 443 VAL H H N N 444 VAL H2 H N N 445 VAL HA H N N 446 VAL HB H N N 447 VAL HG11 H N N 448 VAL HG12 H N N 449 VAL HG13 H N N 450 VAL HG21 H N N 451 VAL HG22 H N N 452 VAL HG23 H N N 453 VAL HXT H N N 454 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DMS S O doub N N 83 DMS S C1 sing N N 84 DMS S C2 sing N N 85 DMS C1 H11 sing N N 86 DMS C1 H12 sing N N 87 DMS C1 H13 sing N N 88 DMS C2 H21 sing N N 89 DMS C2 H22 sing N N 90 DMS C2 H23 sing N N 91 EDO C1 O1 sing N N 92 EDO C1 C2 sing N N 93 EDO C1 H11 sing N N 94 EDO C1 H12 sing N N 95 EDO O1 HO1 sing N N 96 EDO C2 O2 sing N N 97 EDO C2 H21 sing N N 98 EDO C2 H22 sing N N 99 EDO O2 HO2 sing N N 100 GLN N CA sing N N 101 GLN N H sing N N 102 GLN N H2 sing N N 103 GLN CA C sing N N 104 GLN CA CB sing N N 105 GLN CA HA sing N N 106 GLN C O doub N N 107 GLN C OXT sing N N 108 GLN CB CG sing N N 109 GLN CB HB2 sing N N 110 GLN CB HB3 sing N N 111 GLN CG CD sing N N 112 GLN CG HG2 sing N N 113 GLN CG HG3 sing N N 114 GLN CD OE1 doub N N 115 GLN CD NE2 sing N N 116 GLN NE2 HE21 sing N N 117 GLN NE2 HE22 sing N N 118 GLN OXT HXT sing N N 119 GLU N CA sing N N 120 GLU N H sing N N 121 GLU N H2 sing N N 122 GLU CA C sing N N 123 GLU CA CB sing N N 124 GLU CA HA sing N N 125 GLU C O doub N N 126 GLU C OXT sing N N 127 GLU CB CG sing N N 128 GLU CB HB2 sing N N 129 GLU CB HB3 sing N N 130 GLU CG CD sing N N 131 GLU CG HG2 sing N N 132 GLU CG HG3 sing N N 133 GLU CD OE1 doub N N 134 GLU CD OE2 sing N N 135 GLU OE2 HE2 sing N N 136 GLU OXT HXT sing N N 137 GLY N CA sing N N 138 GLY N H sing N N 139 GLY N H2 sing N N 140 GLY CA C sing N N 141 GLY CA HA2 sing N N 142 GLY CA HA3 sing N N 143 GLY C O doub N N 144 GLY C OXT sing N N 145 GLY OXT HXT sing N N 146 HIS N CA sing N N 147 HIS N H sing N N 148 HIS N H2 sing N N 149 HIS CA C sing N N 150 HIS CA CB sing N N 151 HIS CA HA sing N N 152 HIS C O doub N N 153 HIS C OXT sing N N 154 HIS CB CG sing N N 155 HIS CB HB2 sing N N 156 HIS CB HB3 sing N N 157 HIS CG ND1 sing Y N 158 HIS CG CD2 doub Y N 159 HIS ND1 CE1 doub Y N 160 HIS ND1 HD1 sing N N 161 HIS CD2 NE2 sing Y N 162 HIS CD2 HD2 sing N N 163 HIS CE1 NE2 sing Y N 164 HIS CE1 HE1 sing N N 165 HIS NE2 HE2 sing N N 166 HIS OXT HXT sing N N 167 HOH O H1 sing N N 168 HOH O H2 sing N N 169 ILE N CA sing N N 170 ILE N H sing N N 171 ILE N H2 sing N N 172 ILE CA C sing N N 173 ILE CA CB sing N N 174 ILE CA HA sing N N 175 ILE C O doub N N 176 ILE C OXT sing N N 177 ILE CB CG1 sing N N 178 ILE CB CG2 sing N N 179 ILE CB HB sing N N 180 ILE CG1 CD1 sing N N 181 ILE CG1 HG12 sing N N 182 ILE CG1 HG13 sing N N 183 ILE CG2 HG21 sing N N 184 ILE CG2 HG22 sing N N 185 ILE CG2 HG23 sing N N 186 ILE CD1 HD11 sing N N 187 ILE CD1 HD12 sing N N 188 ILE CD1 HD13 sing N N 189 ILE OXT HXT sing N N 190 LEU N CA sing N N 191 LEU N H sing N N 192 LEU N H2 sing N N 193 LEU CA C sing N N 194 LEU CA CB sing N N 195 LEU CA HA sing N N 196 LEU C O doub N N 197 LEU C OXT sing N N 198 LEU CB CG sing N N 199 LEU CB HB2 sing N N 200 LEU CB HB3 sing N N 201 LEU CG CD1 sing N N 202 LEU CG CD2 sing N N 203 LEU CG HG sing N N 204 LEU CD1 HD11 sing N N 205 LEU CD1 HD12 sing N N 206 LEU CD1 HD13 sing N N 207 LEU CD2 HD21 sing N N 208 LEU CD2 HD22 sing N N 209 LEU CD2 HD23 sing N N 210 LEU OXT HXT sing N N 211 LYS N CA sing N N 212 LYS N H sing N N 213 LYS N H2 sing N N 214 LYS CA C sing N N 215 LYS CA CB sing N N 216 LYS CA HA sing N N 217 LYS C O doub N N 218 LYS C OXT sing N N 219 LYS CB CG sing N N 220 LYS CB HB2 sing N N 221 LYS CB HB3 sing N N 222 LYS CG CD sing N N 223 LYS CG HG2 sing N N 224 LYS CG HG3 sing N N 225 LYS CD CE sing N N 226 LYS CD HD2 sing N N 227 LYS CD HD3 sing N N 228 LYS CE NZ sing N N 229 LYS CE HE2 sing N N 230 LYS CE HE3 sing N N 231 LYS NZ HZ1 sing N N 232 LYS NZ HZ2 sing N N 233 LYS NZ HZ3 sing N N 234 LYS OXT HXT sing N N 235 MET N CA sing N N 236 MET N H sing N N 237 MET N H2 sing N N 238 MET CA C sing N N 239 MET CA CB sing N N 240 MET CA HA sing N N 241 MET C O doub N N 242 MET C OXT sing N N 243 MET CB CG sing N N 244 MET CB HB2 sing N N 245 MET CB HB3 sing N N 246 MET CG SD sing N N 247 MET CG HG2 sing N N 248 MET CG HG3 sing N N 249 MET SD CE sing N N 250 MET CE HE1 sing N N 251 MET CE HE2 sing N N 252 MET CE HE3 sing N N 253 MET OXT HXT sing N N 254 NQN CL C1 sing N N 255 NQN N C1 doub Y N 256 NQN N C sing Y N 257 NQN C1 C2 sing Y N 258 NQN C C4 doub Y N 259 NQN C2 C17 sing N N 260 NQN C2 C3 doub Y N 261 NQN C17 N4 trip N N 262 NQN C4 C3 sing Y N 263 NQN C3 N1 sing N N 264 NQN N1 C5 sing N N 265 NQN C5 C6 doub Y N 266 NQN C5 C10 sing Y N 267 NQN C6 C7 sing Y N 268 NQN C10 C9 doub Y N 269 NQN C7 C8 doub Y N 270 NQN C16 C15 sing N N 271 NQN C14 C15 sing N N 272 NQN C14 C13 sing N N 273 NQN C15 O1 sing N N 274 NQN C9 C8 sing Y N 275 NQN C9 N2 sing N N 276 NQN C8 N3 sing N N 277 NQN C13 N2 sing N N 278 NQN N2 C11 sing N N 279 NQN N3 C11 sing N N 280 NQN N3 C12 sing N N 281 NQN C11 O doub N N 282 NQN C4 H1 sing N N 283 NQN C10 H2 sing N N 284 NQN C6 H3 sing N N 285 NQN C7 H4 sing N N 286 NQN N1 H5 sing N N 287 NQN C H6 sing N N 288 NQN C13 H7 sing N N 289 NQN C13 H8 sing N N 290 NQN C14 H9 sing N N 291 NQN C14 H10 sing N N 292 NQN C15 H11 sing N N 293 NQN O1 H12 sing N N 294 NQN C16 H13 sing N N 295 NQN C16 H14 sing N N 296 NQN C16 H15 sing N N 297 NQN C12 H16 sing N N 298 NQN C12 H17 sing N N 299 NQN C12 H18 sing N N 300 PHE N CA sing N N 301 PHE N H sing N N 302 PHE N H2 sing N N 303 PHE CA C sing N N 304 PHE CA CB sing N N 305 PHE CA HA sing N N 306 PHE C O doub N N 307 PHE C OXT sing N N 308 PHE CB CG sing N N 309 PHE CB HB2 sing N N 310 PHE CB HB3 sing N N 311 PHE CG CD1 doub Y N 312 PHE CG CD2 sing Y N 313 PHE CD1 CE1 sing Y N 314 PHE CD1 HD1 sing N N 315 PHE CD2 CE2 doub Y N 316 PHE CD2 HD2 sing N N 317 PHE CE1 CZ doub Y N 318 PHE CE1 HE1 sing N N 319 PHE CE2 CZ sing Y N 320 PHE CE2 HE2 sing N N 321 PHE CZ HZ sing N N 322 PHE OXT HXT sing N N 323 PRO N CA sing N N 324 PRO N CD sing N N 325 PRO N H sing N N 326 PRO CA C sing N N 327 PRO CA CB sing N N 328 PRO CA HA sing N N 329 PRO C O doub N N 330 PRO C OXT sing N N 331 PRO CB CG sing N N 332 PRO CB HB2 sing N N 333 PRO CB HB3 sing N N 334 PRO CG CD sing N N 335 PRO CG HG2 sing N N 336 PRO CG HG3 sing N N 337 PRO CD HD2 sing N N 338 PRO CD HD3 sing N N 339 PRO OXT HXT sing N N 340 SER N CA sing N N 341 SER N H sing N N 342 SER N H2 sing N N 343 SER CA C sing N N 344 SER CA CB sing N N 345 SER CA HA sing N N 346 SER C O doub N N 347 SER C OXT sing N N 348 SER CB OG sing N N 349 SER CB HB2 sing N N 350 SER CB HB3 sing N N 351 SER OG HG sing N N 352 SER OXT HXT sing N N 353 THR N CA sing N N 354 THR N H sing N N 355 THR N H2 sing N N 356 THR CA C sing N N 357 THR CA CB sing N N 358 THR CA HA sing N N 359 THR C O doub N N 360 THR C OXT sing N N 361 THR CB OG1 sing N N 362 THR CB CG2 sing N N 363 THR CB HB sing N N 364 THR OG1 HG1 sing N N 365 THR CG2 HG21 sing N N 366 THR CG2 HG22 sing N N 367 THR CG2 HG23 sing N N 368 THR OXT HXT sing N N 369 TRP N CA sing N N 370 TRP N H sing N N 371 TRP N H2 sing N N 372 TRP CA C sing N N 373 TRP CA CB sing N N 374 TRP CA HA sing N N 375 TRP C O doub N N 376 TRP C OXT sing N N 377 TRP CB CG sing N N 378 TRP CB HB2 sing N N 379 TRP CB HB3 sing N N 380 TRP CG CD1 doub Y N 381 TRP CG CD2 sing Y N 382 TRP CD1 NE1 sing Y N 383 TRP CD1 HD1 sing N N 384 TRP CD2 CE2 doub Y N 385 TRP CD2 CE3 sing Y N 386 TRP NE1 CE2 sing Y N 387 TRP NE1 HE1 sing N N 388 TRP CE2 CZ2 sing Y N 389 TRP CE3 CZ3 doub Y N 390 TRP CE3 HE3 sing N N 391 TRP CZ2 CH2 doub Y N 392 TRP CZ2 HZ2 sing N N 393 TRP CZ3 CH2 sing Y N 394 TRP CZ3 HZ3 sing N N 395 TRP CH2 HH2 sing N N 396 TRP OXT HXT sing N N 397 TYR N CA sing N N 398 TYR N H sing N N 399 TYR N H2 sing N N 400 TYR CA C sing N N 401 TYR CA CB sing N N 402 TYR CA HA sing N N 403 TYR C O doub N N 404 TYR C OXT sing N N 405 TYR CB CG sing N N 406 TYR CB HB2 sing N N 407 TYR CB HB3 sing N N 408 TYR CG CD1 doub Y N 409 TYR CG CD2 sing Y N 410 TYR CD1 CE1 sing Y N 411 TYR CD1 HD1 sing N N 412 TYR CD2 CE2 doub Y N 413 TYR CD2 HD2 sing N N 414 TYR CE1 CZ doub Y N 415 TYR CE1 HE1 sing N N 416 TYR CE2 CZ sing Y N 417 TYR CE2 HE2 sing N N 418 TYR CZ OH sing N N 419 TYR OH HH sing N N 420 TYR OXT HXT sing N N 421 VAL N CA sing N N 422 VAL N H sing N N 423 VAL N H2 sing N N 424 VAL CA C sing N N 425 VAL CA CB sing N N 426 VAL CA HA sing N N 427 VAL C O doub N N 428 VAL C OXT sing N N 429 VAL CB CG1 sing N N 430 VAL CB CG2 sing N N 431 VAL CB HB sing N N 432 VAL CG1 HG11 sing N N 433 VAL CG1 HG12 sing N N 434 VAL CG1 HG13 sing N N 435 VAL CG2 HG21 sing N N 436 VAL CG2 HG22 sing N N 437 VAL CG2 HG23 sing N N 438 VAL OXT HXT sing N N 439 # _pdbx_audit_support.funding_organization 'Cancer Research UK' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number C309/A11566 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NQN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NQN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3BIM _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 6TOI _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014780 _atom_sites.fract_transf_matrix[1][2] 0.008533 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017066 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006001 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL N O S # loop_