HEADER PROTEIN BINDING 15-DEC-19 6TQ0 TITLE CRYSTAL STRUCTURE OF THE HUMAN ARC N-LOBE BOUND TO REPEAT PEPTIDE 5 TITLE 2 FROM GKAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIVITY-REGULATED CYTOSKELETON-ASSOCIATED PROTEIN; COMPND 3 CHAIN: A, C, E, G, I, K, M, O; COMPND 4 SYNONYM: HARC,ACTIVITY-REGULATED GENE 3.1 PROTEIN HOMOLOG,ARG3.1; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: REPEAT PEPTIDE 5 FROM GKAP; COMPND 8 CHAIN: B, D, F, H, J, L, N, P; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ARC, KIAA0278; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS ARC, CAPSID HOMOLOGY, PROTEIN BINDING, GKAP EXPDTA X-RAY DIFFRACTION AUTHOR E.I.HALLIN,C.R.BRAMHAM,P.KURSULA REVDAT 3 24-JAN-24 6TQ0 1 REMARK REVDAT 2 07-APR-21 6TQ0 1 JRNL REVDAT 1 13-JAN-21 6TQ0 0 JRNL AUTH E.I.HALLIN,C.R.BRAMHAM,P.KURSULA JRNL TITL STRUCTURAL PROPERTIES AND PEPTIDE LIGAND BINDING OF THE JRNL TITL 2 CAPSID HOMOLOGY DOMAINS OF HUMAN ARC. JRNL REF BIOCHEM BIOPHYS REP V. 26 00975 2021 JRNL REFN ESSN 2405-5808 JRNL PMID 33732907 JRNL DOI 10.1016/J.BBREP.2021.100975 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16-3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 100.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 41626 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 5250 REMARK 3 ANGLE : 0.755 7039 REMARK 3 CHIRALITY : 0.052 627 REMARK 3 PLANARITY : 0.006 914 REMARK 3 DIHEDRAL : 18.885 3038 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TQ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1292105869. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P13 (MX1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41702 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04500 REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 1.78600 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6TNO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 34.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2 M SODIUM CITRATE, PH 7.4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 96.15000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 4630 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 203 REMARK 465 ALA A 204 REMARK 465 MET A 205 REMARK 465 GLY A 206 REMARK 465 PRO A 207 REMARK 465 GLY A 208 REMARK 465 VAL A 209 REMARK 465 ASP A 210 REMARK 465 GLY C 203 REMARK 465 ALA C 204 REMARK 465 MET C 205 REMARK 465 GLY C 206 REMARK 465 PRO C 207 REMARK 465 GLY C 208 REMARK 465 VAL C 209 REMARK 465 ASP C 210 REMARK 465 MET D 225 REMARK 465 ARG D 232 REMARK 465 GLY E 203 REMARK 465 ALA E 204 REMARK 465 MET E 205 REMARK 465 GLY E 206 REMARK 465 PRO E 207 REMARK 465 GLY E 208 REMARK 465 VAL E 209 REMARK 465 MET F 225 REMARK 465 GLY G 203 REMARK 465 ALA G 204 REMARK 465 MET G 205 REMARK 465 GLY G 206 REMARK 465 PRO G 207 REMARK 465 GLY G 208 REMARK 465 VAL G 209 REMARK 465 ASP G 210 REMARK 465 THR G 211 REMARK 465 MET H 225 REMARK 465 GLY I 203 REMARK 465 ALA I 204 REMARK 465 MET I 205 REMARK 465 GLY I 206 REMARK 465 PRO I 207 REMARK 465 GLY I 208 REMARK 465 VAL I 209 REMARK 465 ASP I 210 REMARK 465 GLY K 203 REMARK 465 ALA K 204 REMARK 465 MET K 205 REMARK 465 GLY K 206 REMARK 465 PRO K 207 REMARK 465 GLY K 208 REMARK 465 VAL K 209 REMARK 465 ASP K 210 REMARK 465 THR K 211 REMARK 465 MET L 225 REMARK 465 GLY M 203 REMARK 465 ALA M 204 REMARK 465 MET M 205 REMARK 465 GLY M 206 REMARK 465 PRO M 207 REMARK 465 GLY M 208 REMARK 465 VAL M 209 REMARK 465 ASP M 210 REMARK 465 MET N 225 REMARK 465 ARG N 232 REMARK 465 GLY O 203 REMARK 465 ALA O 204 REMARK 465 MET O 205 REMARK 465 GLY O 206 REMARK 465 PRO O 207 REMARK 465 GLY O 208 REMARK 465 VAL O 209 REMARK 465 ASP O 210 REMARK 465 THR O 211 REMARK 465 GLY O 277 REMARK 465 ARG P 232 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH12 ARG C 229 OD2 ASP G 216 1.57 REMARK 500 O GLY A 277 OG SER O 234 2.15 REMARK 500 O VAL C 265 O HOH C 301 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU K 215 NZ LYS O 252 1454 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU I 235 CG GLU I 235 CD 0.091 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR E 211 143.33 67.64 REMARK 500 PRO J 226 174.97 -56.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6TNO RELATED DB: PDB REMARK 900 RELATED ID: 6TNQ RELATED DB: PDB DBREF 6TQ0 A 207 277 UNP Q7LC44 ARC_HUMAN 207 277 DBREF 6TQ0 B 225 232 PDB 6TQ0 6TQ0 225 232 DBREF 6TQ0 C 207 277 UNP Q7LC44 ARC_HUMAN 207 277 DBREF 6TQ0 D 225 232 PDB 6TQ0 6TQ0 225 232 DBREF 6TQ0 E 207 277 UNP Q7LC44 ARC_HUMAN 207 277 DBREF 6TQ0 F 225 232 PDB 6TQ0 6TQ0 225 232 DBREF 6TQ0 G 207 277 UNP Q7LC44 ARC_HUMAN 207 277 DBREF 6TQ0 H 225 232 PDB 6TQ0 6TQ0 225 232 DBREF 6TQ0 I 207 277 UNP Q7LC44 ARC_HUMAN 207 277 DBREF 6TQ0 J 225 232 PDB 6TQ0 6TQ0 225 232 DBREF 6TQ0 K 207 277 UNP Q7LC44 ARC_HUMAN 207 277 DBREF 6TQ0 L 225 232 PDB 6TQ0 6TQ0 225 232 DBREF 6TQ0 M 207 277 UNP Q7LC44 ARC_HUMAN 207 277 DBREF 6TQ0 N 225 232 PDB 6TQ0 6TQ0 225 232 DBREF 6TQ0 O 207 277 UNP Q7LC44 ARC_HUMAN 207 277 DBREF 6TQ0 P 225 232 PDB 6TQ0 6TQ0 225 232 SEQADV 6TQ0 GLY A 203 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 ALA A 204 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 MET A 205 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY A 206 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY C 203 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 ALA C 204 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 MET C 205 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY C 206 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY E 203 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 ALA E 204 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 MET E 205 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY E 206 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY G 203 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 ALA G 204 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 MET G 205 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY G 206 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY I 203 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 ALA I 204 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 MET I 205 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY I 206 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY K 203 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 ALA K 204 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 MET K 205 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY K 206 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY M 203 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 ALA M 204 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 MET M 205 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY M 206 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY O 203 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 ALA O 204 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 MET O 205 UNP Q7LC44 EXPRESSION TAG SEQADV 6TQ0 GLY O 206 UNP Q7LC44 EXPRESSION TAG SEQRES 1 A 75 GLY ALA MET GLY PRO GLY VAL ASP THR GLN ILE PHE GLU SEQRES 2 A 75 ASP PRO ARG GLU PHE LEU SER HIS LEU GLU GLU TYR LEU SEQRES 3 A 75 ARG GLN VAL GLY GLY SER GLU GLU TYR TRP LEU SER GLN SEQRES 4 A 75 ILE GLN ASN HIS MET ASN GLY PRO ALA LYS LYS TRP TRP SEQRES 5 A 75 GLU PHE LYS GLN GLY SER VAL LYS ASN TRP VAL GLU PHE SEQRES 6 A 75 LYS LYS GLU PHE LEU GLN TYR SER GLU GLY SEQRES 1 B 8 MET PRO GLY CYS PHE ARG MET ARG SEQRES 1 C 75 GLY ALA MET GLY PRO GLY VAL ASP THR GLN ILE PHE GLU SEQRES 2 C 75 ASP PRO ARG GLU PHE LEU SER HIS LEU GLU GLU TYR LEU SEQRES 3 C 75 ARG GLN VAL GLY GLY SER GLU GLU TYR TRP LEU SER GLN SEQRES 4 C 75 ILE GLN ASN HIS MET ASN GLY PRO ALA LYS LYS TRP TRP SEQRES 5 C 75 GLU PHE LYS GLN GLY SER VAL LYS ASN TRP VAL GLU PHE SEQRES 6 C 75 LYS LYS GLU PHE LEU GLN TYR SER GLU GLY SEQRES 1 D 8 MET PRO GLY CYS PHE ARG MET ARG SEQRES 1 E 75 GLY ALA MET GLY PRO GLY VAL ASP THR GLN ILE PHE GLU SEQRES 2 E 75 ASP PRO ARG GLU PHE LEU SER HIS LEU GLU GLU TYR LEU SEQRES 3 E 75 ARG GLN VAL GLY GLY SER GLU GLU TYR TRP LEU SER GLN SEQRES 4 E 75 ILE GLN ASN HIS MET ASN GLY PRO ALA LYS LYS TRP TRP SEQRES 5 E 75 GLU PHE LYS GLN GLY SER VAL LYS ASN TRP VAL GLU PHE SEQRES 6 E 75 LYS LYS GLU PHE LEU GLN TYR SER GLU GLY SEQRES 1 F 8 MET PRO GLY CYS PHE ARG MET ARG SEQRES 1 G 75 GLY ALA MET GLY PRO GLY VAL ASP THR GLN ILE PHE GLU SEQRES 2 G 75 ASP PRO ARG GLU PHE LEU SER HIS LEU GLU GLU TYR LEU SEQRES 3 G 75 ARG GLN VAL GLY GLY SER GLU GLU TYR TRP LEU SER GLN SEQRES 4 G 75 ILE GLN ASN HIS MET ASN GLY PRO ALA LYS LYS TRP TRP SEQRES 5 G 75 GLU PHE LYS GLN GLY SER VAL LYS ASN TRP VAL GLU PHE SEQRES 6 G 75 LYS LYS GLU PHE LEU GLN TYR SER GLU GLY SEQRES 1 H 8 MET PRO GLY CYS PHE ARG MET ARG SEQRES 1 I 75 GLY ALA MET GLY PRO GLY VAL ASP THR GLN ILE PHE GLU SEQRES 2 I 75 ASP PRO ARG GLU PHE LEU SER HIS LEU GLU GLU TYR LEU SEQRES 3 I 75 ARG GLN VAL GLY GLY SER GLU GLU TYR TRP LEU SER GLN SEQRES 4 I 75 ILE GLN ASN HIS MET ASN GLY PRO ALA LYS LYS TRP TRP SEQRES 5 I 75 GLU PHE LYS GLN GLY SER VAL LYS ASN TRP VAL GLU PHE SEQRES 6 I 75 LYS LYS GLU PHE LEU GLN TYR SER GLU GLY SEQRES 1 J 8 MET PRO GLY CYS PHE ARG MET ARG SEQRES 1 K 75 GLY ALA MET GLY PRO GLY VAL ASP THR GLN ILE PHE GLU SEQRES 2 K 75 ASP PRO ARG GLU PHE LEU SER HIS LEU GLU GLU TYR LEU SEQRES 3 K 75 ARG GLN VAL GLY GLY SER GLU GLU TYR TRP LEU SER GLN SEQRES 4 K 75 ILE GLN ASN HIS MET ASN GLY PRO ALA LYS LYS TRP TRP SEQRES 5 K 75 GLU PHE LYS GLN GLY SER VAL LYS ASN TRP VAL GLU PHE SEQRES 6 K 75 LYS LYS GLU PHE LEU GLN TYR SER GLU GLY SEQRES 1 L 8 MET PRO GLY CYS PHE ARG MET ARG SEQRES 1 M 75 GLY ALA MET GLY PRO GLY VAL ASP THR GLN ILE PHE GLU SEQRES 2 M 75 ASP PRO ARG GLU PHE LEU SER HIS LEU GLU GLU TYR LEU SEQRES 3 M 75 ARG GLN VAL GLY GLY SER GLU GLU TYR TRP LEU SER GLN SEQRES 4 M 75 ILE GLN ASN HIS MET ASN GLY PRO ALA LYS LYS TRP TRP SEQRES 5 M 75 GLU PHE LYS GLN GLY SER VAL LYS ASN TRP VAL GLU PHE SEQRES 6 M 75 LYS LYS GLU PHE LEU GLN TYR SER GLU GLY SEQRES 1 N 8 MET PRO GLY CYS PHE ARG MET ARG SEQRES 1 O 75 GLY ALA MET GLY PRO GLY VAL ASP THR GLN ILE PHE GLU SEQRES 2 O 75 ASP PRO ARG GLU PHE LEU SER HIS LEU GLU GLU TYR LEU SEQRES 3 O 75 ARG GLN VAL GLY GLY SER GLU GLU TYR TRP LEU SER GLN SEQRES 4 O 75 ILE GLN ASN HIS MET ASN GLY PRO ALA LYS LYS TRP TRP SEQRES 5 O 75 GLU PHE LYS GLN GLY SER VAL LYS ASN TRP VAL GLU PHE SEQRES 6 O 75 LYS LYS GLU PHE LEU GLN TYR SER GLU GLY SEQRES 1 P 8 MET PRO GLY CYS PHE ARG MET ARG FORMUL 17 HOH *42(H2 O) HELIX 1 AA1 ASP A 216 GLY A 232 1 17 HELIX 2 AA2 SER A 234 ILE A 242 1 9 HELIX 3 AA3 GLY A 248 GLN A 258 1 11 HELIX 4 AA4 GLY A 259 VAL A 261 5 3 HELIX 5 AA5 ASN A 263 GLY A 277 1 15 HELIX 6 AA6 ASP C 216 GLY C 232 1 17 HELIX 7 AA7 SER C 234 ILE C 242 1 9 HELIX 8 AA8 GLY C 248 GLN C 258 1 11 HELIX 9 AA9 ASN C 263 GLU C 276 1 14 HELIX 10 AB1 ASP E 216 GLY E 232 1 17 HELIX 11 AB2 SER E 234 ILE E 242 1 9 HELIX 12 AB3 GLY E 248 GLN E 258 1 11 HELIX 13 AB4 GLY E 259 VAL E 261 5 3 HELIX 14 AB5 ASN E 263 GLY E 277 1 15 HELIX 15 AB6 ASP G 216 GLY G 232 1 17 HELIX 16 AB7 SER G 234 ILE G 242 1 9 HELIX 17 AB8 GLY G 248 GLN G 258 1 11 HELIX 18 AB9 ASN G 263 GLU G 276 1 14 HELIX 19 AC1 ASP I 216 GLY I 232 1 17 HELIX 20 AC2 SER I 234 ILE I 242 1 9 HELIX 21 AC3 GLY I 248 GLN I 258 1 11 HELIX 22 AC4 GLY I 259 VAL I 261 5 3 HELIX 23 AC5 ASN I 263 GLY I 277 1 15 HELIX 24 AC6 ASP K 216 GLY K 232 1 17 HELIX 25 AC7 SER K 234 ILE K 242 1 9 HELIX 26 AC8 GLN K 243 MET K 246 5 4 HELIX 27 AC9 ASN K 247 GLN K 258 1 12 HELIX 28 AD1 ASN K 263 GLY K 277 1 15 HELIX 29 AD2 ASP M 216 GLY M 232 1 17 HELIX 30 AD3 SER M 234 ILE M 242 1 9 HELIX 31 AD4 GLY M 248 GLN M 258 1 11 HELIX 32 AD5 GLY M 259 VAL M 261 5 3 HELIX 33 AD6 ASN M 263 GLU M 276 1 14 HELIX 34 AD7 ASP O 216 GLY O 232 1 17 HELIX 35 AD8 SER O 234 ILE O 242 1 9 HELIX 36 AD9 GLN O 243 ASN O 247 5 5 HELIX 37 AE1 GLY O 248 GLN O 258 1 11 HELIX 38 AE2 ASN O 263 GLU O 276 1 14 SHEET 1 AA1 3 ILE A 213 PHE A 214 0 SHEET 2 AA1 3 CYS B 228 ARG B 230 1 O CYS B 228 N PHE A 214 SHEET 3 AA1 3 MET A 246 ASN A 247 1 N ASN A 247 O PHE B 229 SHEET 1 AA2 3 ILE C 213 PHE C 214 0 SHEET 2 AA2 3 CYS D 228 ARG D 230 1 O CYS D 228 N PHE C 214 SHEET 3 AA2 3 MET C 246 ASN C 247 1 N ASN C 247 O PHE D 229 SHEET 1 AA3 3 ILE E 213 PHE E 214 0 SHEET 2 AA3 3 CYS F 228 ARG F 230 1 O CYS F 228 N PHE E 214 SHEET 3 AA3 3 MET E 246 ASN E 247 1 N ASN E 247 O PHE F 229 SHEET 1 AA4 2 MET G 246 ASN G 247 0 SHEET 2 AA4 2 PHE H 229 ARG H 230 1 O PHE H 229 N ASN G 247 SHEET 1 AA5 3 ILE I 213 PHE I 214 0 SHEET 2 AA5 3 CYS J 228 ARG J 230 1 O ARG J 230 N PHE I 214 SHEET 3 AA5 3 MET I 246 ASN I 247 1 N ASN I 247 O PHE J 229 SHEET 1 AA6 2 ILE K 213 PHE K 214 0 SHEET 2 AA6 2 CYS L 228 PHE L 229 1 O CYS L 228 N PHE K 214 SHEET 1 AA7 3 ILE M 213 PHE M 214 0 SHEET 2 AA7 3 CYS N 228 ARG N 230 1 O CYS N 228 N PHE M 214 SHEET 3 AA7 3 MET M 246 ASN M 247 1 N ASN M 247 O PHE N 229 SHEET 1 AA8 2 ILE O 213 PHE O 214 0 SHEET 2 AA8 2 CYS P 228 PHE P 229 1 O CYS P 228 N PHE O 214 CRYST1 39.310 192.300 39.560 90.00 94.80 90.00 P 1 21 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025439 0.000000 0.002136 0.00000 SCALE2 0.000000 0.005200 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025367 0.00000