HEADER OXIDOREDUCTASE 17-DEC-19 6TQY TITLE CRYSTAL STRUCTURE OF RIBONUCLEOTIDE REDUCTASE NRDF L61G VARIANT FROM TITLE 2 BACILLUS ANTHRACIS ANAEROBICALLY SOAKED WITH FE(II) AND MN(II) IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SUBUNIT BETA; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.17.4.1; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: L61G VARIANT SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 1392; SOURCE 4 VARIANT: PXO1-/PXO2- DEFICIENT; SOURCE 5 GENE: NRDF, GBAA_1372; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA 2 KEYWDS METAL BINDING; OXIDATION REDUCTION PROCESS; 2'-DEOXYRIBONUCLEOTIDE KEYWDS 2 METABOLISM; DNA REPLICATION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.GRAVE,M.HOGBOM REVDAT 4 24-JAN-24 6TQY 1 LINK REVDAT 3 03-JUN-20 6TQY 1 JRNL REVDAT 2 29-APR-20 6TQY 1 JRNL REVDAT 1 15-APR-20 6TQY 0 JRNL AUTH K.GRAVE,J.J.GRIESE,G.BERGGREN,M.D.BENNETT,M.HOGBOM JRNL TITL THE BACILLUS ANTHRACIS CLASS IB RIBONUCLEOTIDE REDUCTASE JRNL TITL 2 SUBUNIT NRDF INTRINSICALLY SELECTS MANGANESE OVER IRON. JRNL REF J.BIOL.INORG.CHEM. V. 25 571 2020 JRNL REFN ESSN 1432-1327 JRNL PMID 32296998 JRNL DOI 10.1007/S00775-020-01782-3 REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.358 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 60442 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.993 REMARK 3 FREE R VALUE TEST SET COUNT : 3018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.5581 - 4.9542 0.96 2655 139 0.1823 0.2142 REMARK 3 2 4.9542 - 3.9332 0.98 2645 139 0.1404 0.1808 REMARK 3 3 3.9332 - 3.4363 0.99 2627 138 0.1501 0.1935 REMARK 3 4 3.4363 - 3.1223 0.99 2667 141 0.1758 0.2126 REMARK 3 5 3.1223 - 2.8985 1.00 2650 138 0.1791 0.1983 REMARK 3 6 2.8985 - 2.7277 0.99 2645 139 0.1721 0.2227 REMARK 3 7 2.7277 - 2.5911 0.96 2549 134 0.1636 0.2168 REMARK 3 8 2.5911 - 2.4783 0.98 2617 138 0.1615 0.1762 REMARK 3 9 2.4783 - 2.3829 0.99 2615 138 0.1590 0.1970 REMARK 3 10 2.3829 - 2.3007 0.99 2648 139 0.1579 0.1920 REMARK 3 11 2.3007 - 2.2288 0.99 2611 137 0.1550 0.2087 REMARK 3 12 2.2288 - 2.1651 0.99 2633 138 0.1628 0.2100 REMARK 3 13 2.1651 - 2.1081 0.99 2630 137 0.1657 0.2185 REMARK 3 14 2.1081 - 2.0566 0.99 2598 137 0.1752 0.1914 REMARK 3 15 2.0566 - 2.0099 0.99 2628 139 0.1709 0.2523 REMARK 3 16 2.0099 - 1.9671 0.99 2622 138 0.1816 0.2377 REMARK 3 17 1.9671 - 1.9278 0.99 2593 137 0.1937 0.2481 REMARK 3 18 1.9278 - 1.8914 0.98 2565 134 0.1996 0.2367 REMARK 3 19 1.8914 - 1.8576 0.96 2561 134 0.2072 0.2743 REMARK 3 20 1.8576 - 1.8261 0.98 2591 137 0.2144 0.2448 REMARK 3 21 1.8261 - 1.7967 0.98 2602 137 0.2241 0.2463 REMARK 3 22 1.7967 - 1.7700 0.93 2472 130 0.2522 0.3240 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.504 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.75 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4776 REMARK 3 ANGLE : 0.945 6460 REMARK 3 CHIRALITY : 0.049 713 REMARK 3 PLANARITY : 0.006 819 REMARK 3 DIHEDRAL : 15.456 1758 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TQY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1292105776. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60567 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.769 REMARK 200 RESOLUTION RANGE LOW (A) : 46.015 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 3.820 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.63 REMARK 200 R MERGE FOR SHELL (I) : 0.43200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.680 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6QO9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8 - 2.0 M AMMONIUM SULPHATE, 0.1 M REMARK 280 BIS-TRIS METHANE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.24750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5820 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22440 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -107.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 276 REMARK 465 GLU A 277 REMARK 465 GLU A 278 REMARK 465 THR A 289 REMARK 465 ASP A 290 REMARK 465 THR A 291 REMARK 465 LYS A 292 REMARK 465 ASN A 293 REMARK 465 HIS A 294 REMARK 465 ASP A 295 REMARK 465 PHE A 296 REMARK 465 PHE A 297 REMARK 465 SER A 298 REMARK 465 VAL A 299 REMARK 465 LYS A 300 REMARK 465 GLY A 301 REMARK 465 ASN A 302 REMARK 465 GLY A 303 REMARK 465 TYR A 304 REMARK 465 VAL A 305 REMARK 465 LYS A 306 REMARK 465 ALA A 307 REMARK 465 THR A 308 REMARK 465 ASN A 309 REMARK 465 VAL A 310 REMARK 465 GLU A 311 REMARK 465 LYS A 312 REMARK 465 LEU A 313 REMARK 465 SER A 314 REMARK 465 ASP A 315 REMARK 465 ASP A 316 REMARK 465 ASP A 317 REMARK 465 PHE A 318 REMARK 465 VAL A 319 REMARK 465 PHE A 320 REMARK 465 ASN A 321 REMARK 465 PHE A 322 REMARK 465 THR B 289 REMARK 465 ASP B 290 REMARK 465 THR B 291 REMARK 465 LYS B 292 REMARK 465 ASN B 293 REMARK 465 HIS B 294 REMARK 465 ASP B 295 REMARK 465 PHE B 296 REMARK 465 PHE B 297 REMARK 465 SER B 298 REMARK 465 VAL B 299 REMARK 465 LYS B 300 REMARK 465 GLY B 301 REMARK 465 ASN B 302 REMARK 465 GLY B 303 REMARK 465 TYR B 304 REMARK 465 VAL B 305 REMARK 465 LYS B 306 REMARK 465 ALA B 307 REMARK 465 THR B 308 REMARK 465 ASN B 309 REMARK 465 VAL B 310 REMARK 465 GLU B 311 REMARK 465 LYS B 312 REMARK 465 LEU B 313 REMARK 465 SER B 314 REMARK 465 ASP B 315 REMARK 465 ASP B 316 REMARK 465 ASP B 317 REMARK 465 PHE B 318 REMARK 465 VAL B 319 REMARK 465 PHE B 320 REMARK 465 ASN B 321 REMARK 465 PHE B 322 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER B 167 OE2 GLU B 236 1.51 REMARK 500 HE2 HIS B 123 OE2 GLU B 242 1.53 REMARK 500 OE1 GLU A 161 O HOH A 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 236 CD GLU A 236 OE1 -0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 68 -53.58 -140.58 REMARK 500 TYR A 163 -67.17 -148.27 REMARK 500 GLU B 68 -49.29 -142.11 REMARK 500 TYR B 163 -67.60 -145.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 62 OD1 REMARK 620 2 GLU A 93 OE1 98.9 REMARK 620 3 HIS A 96 ND1 109.0 98.6 REMARK 620 4 GLU A 161 OE2 86.2 79.8 164.8 REMARK 620 5 GLU A 195 OE2 154.3 70.6 96.0 69.1 REMARK 620 6 HOH A 567 O 90.5 158.1 96.9 81.2 92.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 93 OE1 REMARK 620 2 GLU A 93 OE2 54.2 REMARK 620 3 GLU A 161 OE1 94.7 82.2 REMARK 620 4 GLU A 161 OE2 63.7 96.3 52.3 REMARK 620 5 GLU A 195 OE1 129.9 171.6 89.9 81.0 REMARK 620 6 GLU A 195 OE2 66.6 120.3 111.8 61.2 65.5 REMARK 620 7 HIS A 198 ND1 98.9 90.5 156.7 150.9 95.7 91.0 REMARK 620 8 HOH A 501 O 129.3 77.8 60.3 112.5 95.8 160.4 96.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 62 OD1 REMARK 620 2 GLU B 93 OE1 91.5 REMARK 620 3 HIS B 96 ND1 104.4 96.5 REMARK 620 4 GLU B 161 OE2 87.8 85.9 167.4 REMARK 620 5 GLU B 195 OE2 157.0 80.1 97.8 70.4 REMARK 620 6 HOH B 576 O 91.6 168.7 93.3 83.3 92.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 93 OE2 REMARK 620 2 GLU B 161 OE1 87.4 REMARK 620 3 GLU B 195 OE1 170.9 88.9 REMARK 620 4 GLU B 195 OE2 109.4 103.6 63.5 REMARK 620 5 HIS B 198 ND1 92.1 168.1 93.2 87.8 REMARK 620 6 HOH B 504 O 82.7 68.9 103.6 165.9 99.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6TQV RELATED DB: PDB REMARK 900 RELATED ID: 6TQW RELATED DB: PDB REMARK 900 RELATED ID: 6TQX RELATED DB: PDB DBREF 6TQY A 1 322 UNP Q81TB4 Q81TB4_BACAN 1 322 DBREF 6TQY B 1 322 UNP Q81TB4 Q81TB4_BACAN 1 322 SEQADV 6TQY GLY A 61 UNP Q81TB4 LEU 61 VARIANT SEQADV 6TQY GLY B 61 UNP Q81TB4 LEU 61 VARIANT SEQRES 1 A 322 MET ARG ALA VAL ASN TRP ASN LYS LYS GLU ASP ASP PHE SEQRES 2 A 322 SER LEU MET PHE TRP LYS GLN ASN ILE ALA GLN PHE TRP SEQRES 3 A 322 THR GLU GLU GLU ILE ALA VAL SER SER ASP LYS ASN THR SEQRES 4 A 322 TRP VAL GLN LEU SER LYS GLU GLU GLN ILE ALA TYR LYS SEQRES 5 A 322 ARG VAL LEU GLY GLY LEU THR LEU GLY ASP THR LYS GLN SEQRES 6 A 322 GLY GLY GLU GLY MET PRO LEU VAL LEU VAL HIS LEU GLU SEQRES 7 A 322 ASN LEU GLN ALA LYS SER VAL LEU ALA PHE MET GLY ALA SEQRES 8 A 322 MET GLU GLU VAL HIS ALA LYS SER TYR SER HIS ILE PHE SEQRES 9 A 322 THR THR LEU ALA THR GLU GLU GLU ILE ASP GLU ILE PHE SEQRES 10 A 322 ASP TRP VAL ASP THR HIS PRO LEU LEU GLU LYS LYS ALA SEQRES 11 A 322 GLY ILE ILE THR SER TYR TYR ARG ARG LEU LEU LYS PRO SEQRES 12 A 322 GLU VAL THR LYS LYS GLU LEU TYR MET ALA MET VAL ALA SEQRES 13 A 322 SER VAL PHE LEU GLU SER TYR LEU PHE TYR SER GLY PHE SEQRES 14 A 322 PHE TYR PRO LEU TYR LEU ALA GLY GLN GLY LYS LEU THR SEQRES 15 A 322 ALA SER GLY GLU ILE ILE ASN LEU ILE ILE ARG ASP GLU SEQRES 16 A 322 SER ILE HIS GLY VAL PHE VAL GLY ILE LEU ALA GLN GLN SEQRES 17 A 322 ILE PHE ALA GLU LEU SER ALA GLU ASP GLN GLN GLU VAL SEQRES 18 A 322 GLN LYS GLU THR GLN GLU LEU LEU MET GLU LEU TYR GLU SEQRES 19 A 322 ILE GLU MET ALA TYR THR GLU GLU ILE TYR THR SER ILE SEQRES 20 A 322 GLY LEU VAL GLU ASP VAL ASN ARG PHE VAL ARG TYR ASN SEQRES 21 A 322 ALA ASN LYS GLY LEU MET ASN LEU GLY LEU GLU PRO LYS SEQRES 22 A 322 PHE GLU GLU GLU GLU ILE ASN PRO ILE VAL LEU ASN GLY SEQRES 23 A 322 LEU ARG THR ASP THR LYS ASN HIS ASP PHE PHE SER VAL SEQRES 24 A 322 LYS GLY ASN GLY TYR VAL LYS ALA THR ASN VAL GLU LYS SEQRES 25 A 322 LEU SER ASP ASP ASP PHE VAL PHE ASN PHE SEQRES 1 B 322 MET ARG ALA VAL ASN TRP ASN LYS LYS GLU ASP ASP PHE SEQRES 2 B 322 SER LEU MET PHE TRP LYS GLN ASN ILE ALA GLN PHE TRP SEQRES 3 B 322 THR GLU GLU GLU ILE ALA VAL SER SER ASP LYS ASN THR SEQRES 4 B 322 TRP VAL GLN LEU SER LYS GLU GLU GLN ILE ALA TYR LYS SEQRES 5 B 322 ARG VAL LEU GLY GLY LEU THR LEU GLY ASP THR LYS GLN SEQRES 6 B 322 GLY GLY GLU GLY MET PRO LEU VAL LEU VAL HIS LEU GLU SEQRES 7 B 322 ASN LEU GLN ALA LYS SER VAL LEU ALA PHE MET GLY ALA SEQRES 8 B 322 MET GLU GLU VAL HIS ALA LYS SER TYR SER HIS ILE PHE SEQRES 9 B 322 THR THR LEU ALA THR GLU GLU GLU ILE ASP GLU ILE PHE SEQRES 10 B 322 ASP TRP VAL ASP THR HIS PRO LEU LEU GLU LYS LYS ALA SEQRES 11 B 322 GLY ILE ILE THR SER TYR TYR ARG ARG LEU LEU LYS PRO SEQRES 12 B 322 GLU VAL THR LYS LYS GLU LEU TYR MET ALA MET VAL ALA SEQRES 13 B 322 SER VAL PHE LEU GLU SER TYR LEU PHE TYR SER GLY PHE SEQRES 14 B 322 PHE TYR PRO LEU TYR LEU ALA GLY GLN GLY LYS LEU THR SEQRES 15 B 322 ALA SER GLY GLU ILE ILE ASN LEU ILE ILE ARG ASP GLU SEQRES 16 B 322 SER ILE HIS GLY VAL PHE VAL GLY ILE LEU ALA GLN GLN SEQRES 17 B 322 ILE PHE ALA GLU LEU SER ALA GLU ASP GLN GLN GLU VAL SEQRES 18 B 322 GLN LYS GLU THR GLN GLU LEU LEU MET GLU LEU TYR GLU SEQRES 19 B 322 ILE GLU MET ALA TYR THR GLU GLU ILE TYR THR SER ILE SEQRES 20 B 322 GLY LEU VAL GLU ASP VAL ASN ARG PHE VAL ARG TYR ASN SEQRES 21 B 322 ALA ASN LYS GLY LEU MET ASN LEU GLY LEU GLU PRO LYS SEQRES 22 B 322 PHE GLU GLU GLU GLU ILE ASN PRO ILE VAL LEU ASN GLY SEQRES 23 B 322 LEU ARG THR ASP THR LYS ASN HIS ASP PHE PHE SER VAL SEQRES 24 B 322 LYS GLY ASN GLY TYR VAL LYS ALA THR ASN VAL GLU LYS SEQRES 25 B 322 LEU SER ASP ASP ASP PHE VAL PHE ASN PHE HET MN A 401 1 HET MN A 402 1 HET SO4 A 403 5 HET SO4 A 404 5 HET MN B 401 1 HET MN B 402 1 HET SO4 B 403 5 HET SO4 B 404 5 HET SO4 B 405 5 HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION FORMUL 3 MN 4(MN 2+) FORMUL 5 SO4 5(O4 S 2-) FORMUL 12 HOH *278(H2 O) HELIX 1 AA1 PHE A 13 GLN A 24 1 12 HELIX 2 AA2 THR A 27 ILE A 31 5 5 HELIX 3 AA3 VAL A 33 SER A 35 5 3 HELIX 4 AA4 ASP A 36 VAL A 41 1 6 HELIX 5 AA5 SER A 44 GLU A 68 1 25 HELIX 6 AA6 GLU A 68 LEU A 77 1 10 HELIX 7 AA7 ASN A 79 ALA A 108 1 30 HELIX 8 AA8 THR A 109 HIS A 123 1 15 HELIX 9 AA9 HIS A 123 ARG A 139 1 17 HELIX 10 AB1 THR A 146 TYR A 163 1 18 HELIX 11 AB2 PHE A 165 GLY A 177 1 13 HELIX 12 AB3 LEU A 181 LEU A 213 1 33 HELIX 13 AB4 SER A 214 THR A 245 1 32 HELIX 14 AB5 SER A 246 GLY A 248 5 3 HELIX 15 AB6 LEU A 249 LEU A 268 1 20 HELIX 16 AB7 ASN A 280 ARG A 288 1 9 HELIX 17 AB8 PHE B 13 GLN B 24 1 12 HELIX 18 AB9 THR B 27 ILE B 31 5 5 HELIX 19 AC1 VAL B 33 SER B 35 5 3 HELIX 20 AC2 ASP B 36 VAL B 41 1 6 HELIX 21 AC3 SER B 44 GLU B 68 1 25 HELIX 22 AC4 GLU B 68 LEU B 77 1 10 HELIX 23 AC5 ASN B 79 ALA B 108 1 30 HELIX 24 AC6 THR B 109 HIS B 123 1 15 HELIX 25 AC7 HIS B 123 ARG B 139 1 17 HELIX 26 AC8 THR B 146 TYR B 163 1 18 HELIX 27 AC9 PHE B 165 GLY B 177 1 13 HELIX 28 AD1 LEU B 181 LEU B 213 1 33 HELIX 29 AD2 SER B 214 THR B 245 1 32 HELIX 30 AD3 SER B 246 GLY B 248 5 3 HELIX 31 AD4 LEU B 249 LEU B 268 1 20 HELIX 32 AD5 ASN B 280 ARG B 288 1 9 LINK OD1 ASP A 62 MN MN A 401 1555 1555 2.03 LINK OE1 GLU A 93 MN MN A 401 1555 1555 2.15 LINK OE1 GLU A 93 MN MN A 402 1555 1555 2.53 LINK OE2 GLU A 93 MN MN A 402 1555 1555 2.12 LINK ND1 HIS A 96 MN MN A 401 1555 1555 2.26 LINK OE2 GLU A 161 MN MN A 401 1555 1555 2.22 LINK OE1 GLU A 161 MN MN A 402 1555 1555 2.09 LINK OE2 GLU A 161 MN MN A 402 1555 1555 2.77 LINK OE2 GLU A 195 MN MN A 401 1555 1555 2.22 LINK OE1 GLU A 195 MN MN A 402 1555 1555 2.10 LINK OE2 GLU A 195 MN MN A 402 1555 1555 2.01 LINK ND1 HIS A 198 MN MN A 402 1555 1555 2.21 LINK MN MN A 401 O HOH A 567 1555 1555 2.10 LINK MN MN A 402 O HOH A 501 1555 1555 2.27 LINK OD1 ASP B 62 MN MN B 401 1555 1555 2.02 LINK OE1 GLU B 93 MN MN B 401 1555 1555 2.09 LINK OE2 GLU B 93 MN MN B 402 1555 1555 2.10 LINK ND1 HIS B 96 MN MN B 401 1555 1555 2.26 LINK OE2 GLU B 161 MN MN B 401 1555 1555 2.21 LINK OE1 GLU B 161 MN MN B 402 1555 1555 2.14 LINK OE2 GLU B 195 MN MN B 401 1555 1555 2.19 LINK OE1 GLU B 195 MN MN B 402 1555 1555 2.10 LINK OE2 GLU B 195 MN MN B 402 1555 1555 2.08 LINK ND1 HIS B 198 MN MN B 402 1555 1555 2.23 LINK MN MN B 401 O HOH B 576 1555 1555 2.08 LINK MN MN B 402 O HOH B 504 1555 1555 2.21 SITE 1 AC1 7 ASP A 62 GLU A 93 HIS A 96 GLU A 161 SITE 2 AC1 7 GLU A 195 MN A 402 HOH A 567 SITE 1 AC2 6 GLU A 93 GLU A 161 GLU A 195 HIS A 198 SITE 2 AC2 6 MN A 401 HOH A 501 SITE 1 AC3 8 THR A 146 LYS A 147 HOH A 520 HOH A 529 SITE 2 AC3 8 HOH A 542 HOH A 570 HOH A 571 HOH A 600 SITE 1 AC4 2 LYS A 45 HOH A 511 SITE 1 AC5 7 ASP B 62 GLU B 93 HIS B 96 GLU B 161 SITE 2 AC5 7 GLU B 195 MN B 402 HOH B 576 SITE 1 AC6 6 GLU B 93 GLU B 161 GLU B 195 HIS B 198 SITE 2 AC6 6 MN B 401 HOH B 504 SITE 1 AC7 1 LYS B 37 SITE 1 AC8 2 MET B 1 ARG B 2 SITE 1 AC9 6 ALA B 32 VAL B 33 SER B 34 HIS B 102 SITE 2 AC9 6 THR B 106 HOH B 512 CRYST1 57.247 60.495 95.996 90.00 106.53 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017468 0.000000 0.005183 0.00000 SCALE2 0.000000 0.016530 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010866 0.00000