HEADER TRANSFERASE 20-DEC-19 6TSC TITLE OPHMA I407P COMPLEX WITH SAH COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDE N-METHYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: GLY-PHE-PRO-TRP-MVA-ILE-MVA-VAL-GLY-VAL-PRO-GLY; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OMPHALOTUS OLEARIUS; SOURCE 3 ORGANISM_TAXID: 72120; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: OMPHALOTUS OLEARIUS; SOURCE 8 ORGANISM_TAXID: 72120; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS PEPTIDE BOND N-METHYLTRANSFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.SONG,J.H.NAISMITH REVDAT 3 24-JAN-24 6TSC 1 REMARK REVDAT 2 29-JUL-20 6TSC 1 JRNL REVDAT 1 24-JUN-20 6TSC 0 JRNL AUTH H.SONG,J.R.FAHRIG-KAMARAUSKAITE,E.MATABARO,H.KASPAR, JRNL AUTH 2 S.L.SHIRRAN,C.ZACH,A.PACE,B.A.STEFANOV,J.H.NAISMITH, JRNL AUTH 3 M.KUNZLER JRNL TITL SUBSTRATE PLASTICITY OF A FUNGAL PEPTIDE JRNL TITL 2 ALPHA-N-METHYLTRANSFERASE. JRNL REF ACS CHEM.BIOL. V. 15 1901 2020 JRNL REFN ESSN 1554-8937 JRNL PMID 32491837 JRNL DOI 10.1021/ACSCHEMBIO.0C00237 REMARK 2 REMARK 2 RESOLUTION. 2.19 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.19 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36209 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1846 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.19 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.25 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2651 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.4530 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.4360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2960 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 3 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 99.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.87000 REMARK 3 B22 (A**2) : 2.87000 REMARK 3 B33 (A**2) : -9.31000 REMARK 3 B12 (A**2) : 1.44000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.163 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.149 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.218 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.313 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3058 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2831 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4162 ; 1.518 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6569 ; 1.192 ; 1.573 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 376 ; 6.939 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 155 ;33.789 ;22.065 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 485 ;15.709 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;20.355 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 398 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3426 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 625 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 401 REMARK 3 ORIGIN FOR THE GROUP (A): 21.7092 36.1848 -1.6541 REMARK 3 T TENSOR REMARK 3 T11: 0.1641 T22: 0.1888 REMARK 3 T33: 0.2057 T12: 0.0672 REMARK 3 T13: -0.0114 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.0180 L22: 1.0531 REMARK 3 L33: 6.9679 L12: -0.3183 REMARK 3 L13: 0.4877 L23: -0.1908 REMARK 3 S TENSOR REMARK 3 S11: 0.2257 S12: -0.1797 S13: -0.0789 REMARK 3 S21: -0.3552 S22: -0.1961 S23: 0.0195 REMARK 3 S31: 0.4332 S32: -0.1722 S33: -0.0296 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 397 B 408 REMARK 3 ORIGIN FOR THE GROUP (A): 16.4886 33.6559 -18.5669 REMARK 3 T TENSOR REMARK 3 T11: 0.6777 T22: 0.4642 REMARK 3 T33: 0.5078 T12: -0.0449 REMARK 3 T13: -0.3364 T23: 0.1738 REMARK 3 L TENSOR REMARK 3 L11: 11.7916 L22: 15.7267 REMARK 3 L33: 4.8984 L12: -13.6131 REMARK 3 L13: -7.4595 L23: 8.5763 REMARK 3 S TENSOR REMARK 3 S11: 0.1116 S12: 0.3727 S13: -0.7470 REMARK 3 S21: -0.1444 S22: -0.3551 S23: 0.9191 REMARK 3 S31: 0.2340 S32: -0.3924 S33: 0.2435 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6TSC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-DEC-19. REMARK 100 THE DEPOSITION ID IS D_1292104734. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38116 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.190 REMARK 200 RESOLUTION RANGE LOW (A) : 52.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.19 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5N0O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.3-0.4 M KSCN, 0.1 M BICINE PH 8-9, REMARK 280 1.8-2.5 M SODIUM MALONATE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.66733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.33367 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.33367 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 104.66733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 THR A 5 REMARK 465 GLN A 6 REMARK 465 THR A 7 REMARK 465 LEU A 267 REMARK 465 PRO A 268 REMARK 465 ALA A 269 REMARK 465 GLY A 270 REMARK 465 GLN A 271 REMARK 465 VAL A 272 REMARK 465 PRO A 273 REMARK 465 ASP A 274 REMARK 465 LYS A 275 REMARK 465 LYS A 276 REMARK 465 ALA A 277 REMARK 465 GLU A 388 REMARK 465 SER A 389 REMARK 465 GLY A 390 REMARK 465 GLU A 391 REMARK 465 GLU A 392 REMARK 465 ALA A 393 REMARK 465 SER A 394 REMARK 465 GLN A 395 REMARK 465 ASN A 396 REMARK 465 GLY A 397 REMARK 465 PHE A 398 REMARK 465 PRO A 399 REMARK 465 TRP A 400 REMARK 465 VAL A 401 REMARK 465 ILE A 402 REMARK 465 VAL A 403 REMARK 465 VAL A 404 REMARK 465 GLY A 405 REMARK 465 VAL A 406 REMARK 465 PRO A 407 REMARK 465 GLY A 408 REMARK 465 VAL A 409 REMARK 465 ILE A 410 REMARK 465 GLY A 411 REMARK 465 SER A 412 REMARK 465 VAL A 413 REMARK 465 MET A 414 REMARK 465 SER A 415 REMARK 465 THR A 416 REMARK 465 GLU A 417 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH1 ARG A 110 O PRO A 294 4555 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 22 -54.97 68.15 REMARK 500 PRO A 145 48.71 -109.12 REMARK 500 CYS A 175 52.99 -144.44 REMARK 500 ASP A 180 -162.21 -120.21 REMARK 500 TYR A 295 63.21 -108.72 REMARK 500 PRO A 312 170.54 -58.48 REMARK 500 ALA A 319 76.49 -150.19 REMARK 500 ASP A 344 91.68 -163.07 REMARK 500 SER A 381 -65.27 164.00 REMARK 500 ALA A 386 -119.57 57.35 REMARK 500 PHE B 398 77.69 45.09 REMARK 500 MVA B 401 72.93 -117.26 REMARK 500 PRO B 407 75.24 -32.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 501 DBREF1 6TSC A 2 411 UNP A0A2R2JFI5_OMPOL DBREF2 6TSC A A0A2R2JFI5 1 410 DBREF 6TSC B 397 408 PDB 6TSC 6TSC 397 408 SEQADV 6TSC PRO A 407 UNP A0A2R2JFI ILE 406 ENGINEERED MUTATION SEQADV 6TSC SER A 412 UNP A0A2R2JFI EXPRESSION TAG SEQADV 6TSC VAL A 413 UNP A0A2R2JFI EXPRESSION TAG SEQADV 6TSC MET A 414 UNP A0A2R2JFI EXPRESSION TAG SEQADV 6TSC SER A 415 UNP A0A2R2JFI EXPRESSION TAG SEQADV 6TSC THR A 416 UNP A0A2R2JFI EXPRESSION TAG SEQADV 6TSC GLU A 417 UNP A0A2R2JFI EXPRESSION TAG SEQRES 1 A 416 GLY THR SER THR GLN THR LYS ALA GLY SER LEU THR ILE SEQRES 2 A 416 VAL GLY THR GLY ILE GLU SER ILE GLY GLN MET THR LEU SEQRES 3 A 416 GLN ALA LEU SER TYR ILE GLU ALA ALA ALA LYS VAL PHE SEQRES 4 A 416 TYR CYS VAL ILE ASP PRO ALA THR GLU ALA PHE ILE LEU SEQRES 5 A 416 THR LYS ASN LYS ASN CYS VAL ASP LEU TYR GLN TYR TYR SEQRES 6 A 416 ASP ASN GLY LYS SER ARG LEU ASN THR TYR THR GLN MET SEQRES 7 A 416 SER GLU LEU MET VAL ARG GLU VAL ARG LYS GLY LEU ASP SEQRES 8 A 416 VAL VAL GLY VAL PHE TYR GLY HIS PRO GLY VAL PHE VAL SEQRES 9 A 416 ASN PRO SER HIS ARG ALA LEU ALA ILE ALA LYS SER GLU SEQRES 10 A 416 GLY TYR ARG ALA ARG MET LEU PRO GLY VAL SER ALA GLU SEQRES 11 A 416 ASP CYS LEU PHE ALA ASP LEU CYS ILE ASP PRO SER ASN SEQRES 12 A 416 PRO GLY CYS LEU THR TYR GLU ALA SER ASP PHE LEU ILE SEQRES 13 A 416 ARG ASP ARG PRO VAL SER ILE HIS SER HIS LEU VAL LEU SEQRES 14 A 416 PHE GLN VAL GLY CYS VAL GLY ILE ALA ASP PHE ASN PHE SEQRES 15 A 416 THR GLY PHE ASP ASN ASN LYS PHE GLY VAL LEU VAL ASP SEQRES 16 A 416 ARG LEU GLU GLN GLU TYR GLY ALA GLU HIS PRO VAL VAL SEQRES 17 A 416 HIS TYR ILE ALA ALA MET MET PRO HIS GLN ASP PRO VAL SEQRES 18 A 416 THR ASP LYS TYR THR VAL ALA GLN LEU ARG GLU PRO GLU SEQRES 19 A 416 ILE ALA LYS ARG VAL GLY GLY VAL SER THR PHE TYR ILE SEQRES 20 A 416 PRO PRO LYS ALA ARG LYS ALA SER ASN LEU ASP ILE ILE SEQRES 21 A 416 ARG ARG LEU GLU LEU LEU PRO ALA GLY GLN VAL PRO ASP SEQRES 22 A 416 LYS LYS ALA ARG ILE TYR PRO ALA ASN GLN TRP GLU PRO SEQRES 23 A 416 ASP VAL PRO GLU VAL GLU PRO TYR ARG PRO SER ASP GLN SEQRES 24 A 416 ALA ALA ILE ALA GLN LEU ALA ASP HIS ALA PRO PRO GLU SEQRES 25 A 416 GLN TYR GLN PRO LEU ALA THR SER LYS ALA MET SER ASP SEQRES 26 A 416 VAL MET THR LYS LEU ALA LEU ASP PRO LYS ALA LEU ALA SEQRES 27 A 416 ASP TYR LYS ALA ASP HIS ARG ALA PHE ALA GLN SER VAL SEQRES 28 A 416 PRO ASP LEU THR PRO GLN GLU ARG ALA ALA LEU GLU LEU SEQRES 29 A 416 GLY ASP SER TRP ALA ILE ARG CYS ALA MET LYS ASN MET SEQRES 30 A 416 PRO SER SER LEU LEU ASP ALA ALA ARG GLU SER GLY GLU SEQRES 31 A 416 GLU ALA SER GLN ASN GLY PHE PRO TRP VAL ILE VAL VAL SEQRES 32 A 416 GLY VAL PRO GLY VAL ILE GLY SER VAL MET SER THR GLU SEQRES 1 B 12 GLY PHE PRO TRP MVA ILE MVA VAL GLY VAL PRO GLY HET MVA B 401 8 HET MVA B 403 8 HET SAH A 501 26 HETNAM MVA N-METHYLVALINE HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE FORMUL 2 MVA 2(C6 H13 N O2) FORMUL 3 SAH C14 H20 N6 O5 S FORMUL 4 HOH *3(H2 O) HELIX 1 AA1 THR A 26 ALA A 36 1 11 HELIX 2 AA2 ASP A 45 ASN A 56 1 12 HELIX 3 AA3 TYR A 63 TYR A 66 5 4 HELIX 4 AA4 SER A 71 LYS A 89 1 19 HELIX 5 AA5 VAL A 105 GLU A 118 1 14 HELIX 6 AA6 SER A 129 LEU A 138 1 10 HELIX 7 AA7 ALA A 152 ARG A 158 1 7 HELIX 8 AA8 GLN A 172 VAL A 176 5 5 HELIX 9 AA9 LYS A 190 TYR A 202 1 13 HELIX 10 AB1 ALA A 229 ARG A 232 5 4 HELIX 11 AB2 GLU A 233 LYS A 238 1 6 HELIX 12 AB3 ASN A 257 LEU A 264 1 8 HELIX 13 AB4 ARG A 296 GLN A 305 1 10 HELIX 14 AB5 LEU A 306 HIS A 309 5 4 HELIX 15 AB6 SER A 321 ASP A 334 1 14 HELIX 16 AB7 ASP A 334 ASP A 344 1 11 HELIX 17 AB8 ASP A 344 VAL A 352 1 9 HELIX 18 AB9 THR A 356 GLY A 366 1 11 HELIX 19 AC1 ASP A 367 LYS A 376 1 10 HELIX 20 AC2 SER A 381 ALA A 386 1 6 SHEET 1 AA1 5 CYS A 59 ASP A 61 0 SHEET 2 AA1 5 LYS A 38 CYS A 42 1 N TYR A 41 O VAL A 60 SHEET 3 AA1 5 ASP A 92 PHE A 97 1 O VAL A 96 N PHE A 40 SHEET 4 AA1 5 SER A 11 GLY A 16 1 N SER A 11 O VAL A 93 SHEET 5 AA1 5 ARG A 121 MET A 124 1 O ARG A 123 N LEU A 12 SHEET 1 AA2 5 CYS A 147 GLU A 151 0 SHEET 2 AA2 5 HIS A 167 PHE A 171 1 O VAL A 169 N LEU A 148 SHEET 3 AA2 5 THR A 245 ILE A 248 -1 O PHE A 246 N LEU A 170 SHEET 4 AA2 5 PRO A 207 ILE A 212 -1 N VAL A 209 O TYR A 247 SHEET 5 AA2 5 VAL A 222 THR A 227 -1 O ASP A 224 N HIS A 210 LINK C TRP B 400 N MVA B 401 1555 1555 1.33 LINK C MVA B 401 N ILE B 402 1555 1555 1.33 LINK C ILE B 402 N MVA B 403 1555 1555 1.34 LINK C MVA B 403 N VAL B 404 1555 1555 1.34 CISPEP 1 ASN A 144 PRO A 145 0 3.27 CISPEP 2 TYR A 280 PRO A 281 0 -6.19 SITE 1 AC1 20 ILE A 19 TYR A 98 GLY A 99 HIS A 100 SITE 2 AC1 20 VAL A 103 PHE A 104 VAL A 105 SER A 129 SITE 3 AC1 20 ALA A 130 PHE A 171 GLN A 172 TYR A 211 SITE 4 AC1 20 ILE A 212 ALA A 213 GLY A 242 VAL A 243 SITE 5 AC1 20 SER A 244 THR A 245 HOH A 601 MVA B 403 CRYST1 89.379 89.379 157.001 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011188 0.006460 0.000000 0.00000 SCALE2 0.000000 0.012919 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006369 0.00000