HEADER LIGASE 30-DEC-19 6TTU TITLE UBIQUITIN LIGATION TO SUBSTRATE BY A CULLIN-RING E3 LIGASE AT 3.7A TITLE 2 RESOLUTION: NEDD8-CUL1-RBX1 N98R-SKP1-MONOMERIC B-TRCP1DD-IKBA- TITLE 3 UB~UBE2D2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: F-BOX/WD REPEAT-CONTAINING PROTEIN 1A; COMPND 3 CHAIN: T; COMPND 4 SYNONYM: E3RSIKAPPAB,EPIDIDYMIS TISSUE PROTEIN LI 2A,F-BOX AND WD COMPND 5 REPEATS PROTEIN BETA-TRCP,PIKAPPABALPHA-E3 RECEPTOR SUBUNIT; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: S-PHASE KINASE-ASSOCIATED PROTEIN 1; COMPND 9 CHAIN: S; COMPND 10 SYNONYM: CYCLIN-A/CDK2-ASSOCIATED PROTEIN P19,P19A,ORGAN OF CORTI COMPND 11 PROTEIN 2,OCP-2,ORGAN OF CORTI PROTEIN II,OCP-II,RNA POLYMERASE II COMPND 12 ELONGATION FACTOR-LIKE PROTEIN,SIII,TRANSCRIPTION ELONGATION FACTOR B COMPND 13 POLYPEPTIDE 1-LIKE,P19SKP1; COMPND 14 ENGINEERED: YES; COMPND 15 OTHER_DETAILS: SKP1 CONTAINS TRUNCATIONS OF RESIDUES 38-43, 71-82.; COMPND 16 MOL_ID: 3; COMPND 17 MOLECULE: CULLIN-1; COMPND 18 CHAIN: C; COMPND 19 SYNONYM: CUL-1; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 4; COMPND 22 MOLECULE: NEDD8; COMPND 23 CHAIN: N; COMPND 24 SYNONYM: NEDDYLIN,NEURAL PRECURSOR CELL EXPRESSED DEVELOPMENTALLY COMPND 25 DOWN-REGULATED PROTEIN 8,NEDD-8,UBIQUITIN-LIKE PROTEIN NEDD8; COMPND 26 ENGINEERED: YES; COMPND 27 OTHER_DETAILS: RESIDUE 1, SER, COMES FROM THE LINKER. NEDD8 RESIDUE COMPND 28 STARTS FROM MET.; COMPND 29 MOL_ID: 5; COMPND 30 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE RBX1; COMPND 31 CHAIN: R; COMPND 32 SYNONYM: E3 UBIQUITIN-PROTEIN TRANSFERASE RBX1,PROTEIN ZYP,RING COMPND 33 FINGER PROTEIN 75,RING-BOX PROTEIN 1,RBX1,REGULATOR OF CULLINS 1, COMPND 34 ROC1; COMPND 35 EC: 2.3.2.27,2.3.2.32; COMPND 36 ENGINEERED: YES; COMPND 37 OTHER_DETAILS: RBX1 CONTAINS MUTATION ASN98ARG (N98R). THERE ARE 3 COMPND 38 ZINC IONS COORDINATED THROUGHOUT. THIS IS NOT MEANT TO ALIGN TO THE COMPND 39 C-TERMINUS OF THE PROTEIN.; COMPND 40 MOL_ID: 6; COMPND 41 MOLECULE: UBIQUITIN-CONJUGATING ENZYME E2 D2; COMPND 42 CHAIN: D; COMPND 43 SYNONYM: (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME D2,E2 COMPND 44 UBIQUITIN-CONJUGATING ENZYME D2,UBIQUITIN CARRIER PROTEIN D2, COMPND 45 UBIQUITIN-CONJUGATING ENZYME E2(17)KB 2,UBIQUITIN-CONJUGATING ENZYME COMPND 46 E2-17 KDA 2,UBIQUITIN-PROTEIN LIGASE D2,P53-REGULATED UBIQUITIN- COMPND 47 CONJUGATING ENZYME 1; COMPND 48 EC: 2.3.2.23,2.3.2.24; COMPND 49 ENGINEERED: YES; COMPND 50 OTHER_DETAILS: UBE2D2 CONTAINS MUTATIONS OF THE FOLLOWING: CYS21ILE, COMPND 51 CYS107ALA, CYS111ASP.; COMPND 52 MOL_ID: 7; COMPND 53 MOLECULE: POLYUBIQUITIN-C; COMPND 54 CHAIN: U; COMPND 55 ENGINEERED: YES; COMPND 56 MOL_ID: 8; COMPND 57 MOLECULE: CYS-LYS-LYS-ALA-ARG-HIS-ASP-SEP-GLY; COMPND 58 CHAIN: I; COMPND 59 ENGINEERED: YES; COMPND 60 OTHER_DETAILS: PHOSPHORYLATED PEPTIDE DERIVED FROM IKBA. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BTRC, BTRCP, FBW1A, FBXW1A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: SKP1, EMC19, OCP2, SKP1A, TCEB1L; SOURCE 13 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 14 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 18 ORGANISM_COMMON: HUMAN; SOURCE 19 ORGANISM_TAXID: 9606; SOURCE 20 GENE: CUL1; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 23 MOL_ID: 4; SOURCE 24 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 25 ORGANISM_COMMON: HUMAN; SOURCE 26 ORGANISM_TAXID: 9606; SOURCE 27 GENE: NEDD8; SOURCE 28 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 29 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 31 MOL_ID: 5; SOURCE 32 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 33 ORGANISM_COMMON: HUMAN; SOURCE 34 ORGANISM_TAXID: 9606; SOURCE 35 GENE: RBX1, RNF75, ROC1; SOURCE 36 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 37 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 38 MOL_ID: 6; SOURCE 39 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 40 ORGANISM_COMMON: HUMAN; SOURCE 41 ORGANISM_TAXID: 9606; SOURCE 42 GENE: UBE2D2, PUBC1, UBC4, UBC5B, UBCH4, UBCH5B; SOURCE 43 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 44 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 45 MOL_ID: 7; SOURCE 46 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 47 ORGANISM_COMMON: HUMAN; SOURCE 48 ORGANISM_TAXID: 9606; SOURCE 49 GENE: UBC; SOURCE 50 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 51 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 52 MOL_ID: 8; SOURCE 53 SYNTHETIC: YES; SOURCE 54 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 55 ORGANISM_COMMON: HUMAN; SOURCE 56 ORGANISM_TAXID: 9606 KEYWDS UBIQUITIN, E3 LIGASE, NEDD8, CULLIN, CUL1, RBX1, SKP1, TRCP, UBE2D, KEYWDS 2 IKBALPHA, NEDDYLATION, UBIQUITYLATION, LIGASE EXPDTA ELECTRON MICROSCOPY AUTHOR K.BAEK,J.R.PRABU,B.A.SCHULMAN REVDAT 4 04-MAR-20 6TTU 1 JRNL REVDAT 3 26-FEB-20 6TTU 1 JRNL REVDAT 2 19-FEB-20 6TTU 1 COMPND SOURCE DBREF REVDAT 1 12-FEB-20 6TTU 0 JRNL AUTH K.BAEK,D.T.KRIST,J.R.PRABU,S.HILL,M.KLUGEL,L.M.NEUMAIER, JRNL AUTH 2 S.VON GRONAU,G.KLEIGER,B.A.SCHULMAN JRNL TITL NEDD8 NUCLEATES A MULTIVALENT CULLIN-RING-UBE2D UBIQUITIN JRNL TITL 2 LIGATION ASSEMBLY. JRNL REF NATURE V. 578 461 2020 JRNL REFN ESSN 1476-4687 JRNL PMID 32051583 JRNL DOI 10.1038/S41586-020-2000-Y REMARK 2 REMARK 2 RESOLUTION. 3.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : SERIALEM, COOT, RELION, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.700 REMARK 3 NUMBER OF PARTICLES : 106257 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6TTU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292106057. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : UBIQUITIN LIGATION TO SUBSTRATE REMARK 245 BY A CULLIN-RING E3 LIGASE AT REMARK 245 3.7A RESOLUTION: NEDD8-CUL1- REMARK 245 RBX1 N98R-SKP1-MONOMERIC B- REMARK 245 TRCP1DD-IKBA-UB~UBE2D2; S-PHASE REMARK 245 KINASE-ASSOCIATED PROTEIN 1; REMARK 245 CULLIN-1, E3 UBIQUITIN-PROTEIN REMARK 245 LIGASE RBX1; F-BOX/WD REPEAT- REMARK 245 CONTAINING PROTEIN 1A, NEDD8, S- REMARK 245 PHASE KINASE-ASSOCIATED PROTEIN REMARK 245 1, UBIQUITIN-CONJUGATING ENZYME REMARK 245 E2 D2; SYNTHETIC PEPTIDE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.80 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 70.20 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 74310 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -79.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: T, S, C, N, R, D, U, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET T 1 REMARK 465 ASP T 2 REMARK 465 PRO T 3 REMARK 465 ALA T 4 REMARK 465 GLU T 5 REMARK 465 ALA T 6 REMARK 465 VAL T 7 REMARK 465 LEU T 8 REMARK 465 GLN T 9 REMARK 465 GLU T 10 REMARK 465 LYS T 11 REMARK 465 ALA T 12 REMARK 465 LEU T 13 REMARK 465 LYS T 14 REMARK 465 PHE T 15 REMARK 465 MET T 16 REMARK 465 CYS T 17 REMARK 465 SER T 18 REMARK 465 MET T 19 REMARK 465 PRO T 20 REMARK 465 ARG T 21 REMARK 465 SER T 22 REMARK 465 LEU T 23 REMARK 465 TRP T 24 REMARK 465 LEU T 25 REMARK 465 GLY T 26 REMARK 465 CYS T 27 REMARK 465 SER T 28 REMARK 465 SER T 29 REMARK 465 LEU T 30 REMARK 465 ALA T 31 REMARK 465 ASP T 32 REMARK 465 SER T 33 REMARK 465 MET T 34 REMARK 465 PRO T 35 REMARK 465 SER T 36 REMARK 465 LEU T 37 REMARK 465 ARG T 38 REMARK 465 CYS T 39 REMARK 465 LEU T 40 REMARK 465 TYR T 41 REMARK 465 ASN T 42 REMARK 465 PRO T 43 REMARK 465 GLY T 44 REMARK 465 THR T 45 REMARK 465 GLY T 46 REMARK 465 ALA T 47 REMARK 465 LEU T 48 REMARK 465 THR T 49 REMARK 465 ALA T 50 REMARK 465 PHE T 51 REMARK 465 GLN T 52 REMARK 465 ASN T 53 REMARK 465 SER T 54 REMARK 465 SER T 55 REMARK 465 GLU T 56 REMARK 465 ARG T 57 REMARK 465 GLU T 58 REMARK 465 ASP T 59 REMARK 465 CYS T 60 REMARK 465 ASN T 61 REMARK 465 ASN T 62 REMARK 465 GLY T 63 REMARK 465 GLU T 64 REMARK 465 PRO T 65 REMARK 465 PRO T 66 REMARK 465 ARG T 67 REMARK 465 LYS T 68 REMARK 465 ILE T 69 REMARK 465 ILE T 70 REMARK 465 PRO T 71 REMARK 465 GLU T 72 REMARK 465 LYS T 73 REMARK 465 ASN T 74 REMARK 465 SER T 75 REMARK 465 LEU T 76 REMARK 465 ARG T 77 REMARK 465 GLN T 78 REMARK 465 THR T 79 REMARK 465 TYR T 80 REMARK 465 ASN T 81 REMARK 465 SER T 82 REMARK 465 CYS T 83 REMARK 465 ALA T 84 REMARK 465 ARG T 85 REMARK 465 LEU T 86 REMARK 465 CYS T 87 REMARK 465 LEU T 88 REMARK 465 ASN T 89 REMARK 465 GLN T 90 REMARK 465 GLU T 91 REMARK 465 THR T 92 REMARK 465 VAL T 93 REMARK 465 CYS T 94 REMARK 465 LEU T 95 REMARK 465 ALA T 96 REMARK 465 SER T 97 REMARK 465 THR T 98 REMARK 465 ALA T 99 REMARK 465 MET T 100 REMARK 465 LYS T 101 REMARK 465 THR T 102 REMARK 465 GLU T 103 REMARK 465 ASN T 104 REMARK 465 CYS T 105 REMARK 465 VAL T 106 REMARK 465 ALA T 107 REMARK 465 LYS T 108 REMARK 465 THR T 109 REMARK 465 LYS T 110 REMARK 465 LEU T 111 REMARK 465 ALA T 112 REMARK 465 ASN T 113 REMARK 465 GLY T 114 REMARK 465 THR T 115 REMARK 465 SER T 116 REMARK 465 SER T 117 REMARK 465 MET T 118 REMARK 465 ILE T 119 REMARK 465 VAL T 120 REMARK 465 PRO T 121 REMARK 465 LYS T 122 REMARK 465 GLN T 123 REMARK 465 ARG T 124 REMARK 465 LYS T 125 REMARK 465 LEU T 126 REMARK 465 SER T 127 REMARK 465 ALA T 128 REMARK 465 SER T 129 REMARK 465 TYR T 130 REMARK 465 GLU T 131 REMARK 465 LYS T 132 REMARK 465 GLU T 133 REMARK 465 LYS T 134 REMARK 465 GLU T 135 REMARK 465 LEU T 136 REMARK 465 CYS T 137 REMARK 465 VAL T 138 REMARK 465 LYS T 139 REMARK 465 TYR T 140 REMARK 465 PHE T 141 REMARK 465 GLU T 142 REMARK 465 GLN T 143 REMARK 465 TRP T 144 REMARK 465 SER T 145 REMARK 465 GLU T 146 REMARK 465 SER T 147 REMARK 465 ASP T 148 REMARK 465 GLN T 149 REMARK 465 VAL T 150 REMARK 465 GLU T 151 REMARK 465 PHE T 152 REMARK 465 VAL T 153 REMARK 465 GLU T 154 REMARK 465 HIS T 155 REMARK 465 LEU T 156 REMARK 465 ILE T 157 REMARK 465 SER T 158 REMARK 465 GLN T 159 REMARK 465 MET T 160 REMARK 465 CYS T 161 REMARK 465 HIS T 162 REMARK 465 TYR T 163 REMARK 465 GLN T 164 REMARK 465 HIS T 165 REMARK 465 GLY T 166 REMARK 465 HIS T 167 REMARK 465 ILE T 168 REMARK 465 ASN T 169 REMARK 465 SER T 170 REMARK 465 TYR T 171 REMARK 465 LEU T 172 REMARK 465 LYS T 173 REMARK 465 PRO T 174 REMARK 465 MET T 175 REMARK 465 LEU T 176 REMARK 465 GLN T 177 REMARK 465 ARG T 178 REMARK 465 LYS T 254 REMARK 465 ASN T 255 REMARK 465 LYS T 256 REMARK 465 PRO T 257 REMARK 465 PRO T 258 REMARK 465 ASP T 259 REMARK 465 GLY T 260 REMARK 465 ASN T 261 REMARK 465 ALA T 262 REMARK 465 THR T 302 REMARK 465 SER T 303 REMARK 465 ASN T 584 REMARK 465 ASP T 585 REMARK 465 PRO T 586 REMARK 465 ALA T 587 REMARK 465 ALA T 588 REMARK 465 GLN T 589 REMARK 465 ALA T 590 REMARK 465 GLU T 591 REMARK 465 PRO T 592 REMARK 465 PRO T 593 REMARK 465 ARG T 594 REMARK 465 SER T 595 REMARK 465 PRO T 596 REMARK 465 SER T 597 REMARK 465 ARG T 598 REMARK 465 THR T 599 REMARK 465 TYR T 600 REMARK 465 THR T 601 REMARK 465 TYR T 602 REMARK 465 ILE T 603 REMARK 465 SER T 604 REMARK 465 ARG T 605 REMARK 465 MET S 1 REMARK 465 GLU S 31A REMARK 465 ASP S 31B REMARK 465 LEU S 31C REMARK 465 GLY S 31D REMARK 465 MET S 31E REMARK 465 ASP S 31F REMARK 465 ASP S 31G REMARK 465 GLU S 31H REMARK 465 GLY S 31I REMARK 465 ASP S 31J REMARK 465 ASP S 31K REMARK 465 ASP S 31L REMARK 465 ASP S 60A REMARK 465 ASP S 60B REMARK 465 PRO S 60C REMARK 465 PRO S 60D REMARK 465 PRO S 60E REMARK 465 PRO S 60F REMARK 465 GLU S 60G REMARK 465 ASP S 60H REMARK 465 ASP S 60I REMARK 465 GLU S 60J REMARK 465 ASN S 60K REMARK 465 LYS S 60L REMARK 465 GLU S 60M REMARK 465 LYS S 60N REMARK 465 ARG S 60O REMARK 465 THR S 60P REMARK 465 ASP S 60Q REMARK 465 ASP S 60R REMARK 465 ILE S 60S REMARK 465 THR S 128 REMARK 465 GLU S 129 REMARK 465 GLN S 140 REMARK 465 TRP S 141 REMARK 465 CYS S 142 REMARK 465 GLU S 143 REMARK 465 GLU S 144 REMARK 465 LYS S 145 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 SER C 3 REMARK 465 THR C 4 REMARK 465 ARG C 5 REMARK 465 SER C 6 REMARK 465 GLN C 7 REMARK 465 ASN C 8 REMARK 465 PRO C 9 REMARK 465 HIS C 10 REMARK 465 GLY C 11 REMARK 465 LEU C 12 REMARK 465 LYS C 13 REMARK 465 GLN C 14 REMARK 465 VAL C 56 REMARK 465 HIS C 57 REMARK 465 GLN C 58 REMARK 465 SER C 59 REMARK 465 ASN C 60 REMARK 465 GLN C 61 REMARK 465 ALA C 62 REMARK 465 ARG C 63 REMARK 465 GLY C 64 REMARK 465 ALA C 65 REMARK 465 GLY C 66 REMARK 465 VAL C 67 REMARK 465 PRO C 68 REMARK 465 PRO C 69 REMARK 465 SER C 70 REMARK 465 LYS C 71 REMARK 465 SER C 72 REMARK 465 LYS C 73 REMARK 465 LYS C 74 REMARK 465 GLY C 75 REMARK 465 GLN C 76 REMARK 465 THR C 77 REMARK 465 PRO C 78 REMARK 465 GLY C 79 REMARK 465 GLY C 80 REMARK 465 ALA C 81 REMARK 465 GLY C 152 REMARK 465 ARG C 153 REMARK 465 ASP C 217 REMARK 465 ALA C 218 REMARK 465 PHE C 219 REMARK 465 ALA C 220 REMARK 465 LYS C 221 REMARK 465 GLY C 222 REMARK 465 PRO C 223 REMARK 465 ASP C 653 REMARK 465 GLU C 654 REMARK 465 ASN C 655 REMARK 465 ALA C 656 REMARK 465 ASN C 657 REMARK 465 VAL C 658 REMARK 465 ASP C 659 REMARK 465 MET C 688 REMARK 465 LYS C 689 REMARK 465 THR C 690 REMARK 465 GLU C 691 REMARK 465 GLN C 692 REMARK 465 LYS C 693 REMARK 465 GLN C 694 REMARK 465 GLU C 695 REMARK 465 GLN C 696 REMARK 465 GLU C 697 REMARK 465 THR C 698 REMARK 465 THR C 699 REMARK 465 HIS C 700 REMARK 465 LYS C 701 REMARK 465 ASN C 702 REMARK 465 GLY C 767 REMARK 465 GLU C 768 REMARK 465 LYS C 769 REMARK 465 ASP C 770 REMARK 465 MET R 1 REMARK 465 ALA R 2 REMARK 465 ALA R 3 REMARK 465 ALA R 4 REMARK 465 MET R 5 REMARK 465 ASP R 6 REMARK 465 VAL R 7 REMARK 465 ASP R 8 REMARK 465 THR R 9 REMARK 465 PRO R 10 REMARK 465 SER R 11 REMARK 465 GLY R 12 REMARK 465 THR R 13 REMARK 465 ASN R 14 REMARK 465 SER R 15 REMARK 465 GLY R 16 REMARK 465 ALA R 17 REMARK 465 GLY R 18 REMARK 465 GLN R 60 REMARK 465 ALA R 61 REMARK 465 SER R 62 REMARK 465 ALA R 63 REMARK 465 THR R 64 REMARK 465 SER R 65 REMARK 465 GLU R 66 REMARK 465 LYS R 105 REMARK 465 TYR R 106 REMARK 465 GLY R 107 REMARK 465 HIS R 108 REMARK 465 MET D 1 REMARK 465 GLY U 76 REMARK 465 ARG I 24 REMARK 465 LEU I 25 REMARK 465 LEU I 26 REMARK 465 ASP I 27 REMARK 465 ASP I 28 REMARK 465 LEU I 34 REMARK 465 ASP I 35 REMARK 465 SEP I 36 REMARK 465 MET I 37 REMARK 465 LYS I 38 REMARK 465 ASP I 39 REMARK 465 GLU I 40 REMARK 465 GLU I 41 REMARK 465 ASP I 42 REMARK 465 TYR I 43 REMARK 465 LYS I 44 REMARK 465 ASP I 45 REMARK 465 ASP I 46 REMARK 465 ASP I 47 REMARK 465 ASP I 48 REMARK 465 LYS I 49 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU T 210 CG CD1 CD2 REMARK 470 GLU T 244 CG CD OE1 OE2 REMARK 470 ARG T 290 CG CD NE CZ NH1 NH2 REMARK 470 GLU T 301 CG CD OE1 OE2 REMARK 470 LYS T 304 CG CD CE NZ REMARK 470 ARG T 337 CG CD NE CZ NH1 NH2 REMARK 470 ARG T 354 CG CD NE CZ NH1 NH2 REMARK 470 ASN T 393 CG OD1 ND2 REMARK 470 LYS T 466 CG CD CE NZ REMARK 470 ASP T 476 CG OD1 OD2 REMARK 470 ARG T 477 CG CD NE CZ NH1 NH2 REMARK 470 GLU T 506 CG CD OE1 OE2 REMARK 470 GLU T 507 CG CD OE1 OE2 REMARK 470 ASN T 516 CG OD1 ND2 REMARK 470 ARG T 540 CG CD NE CZ NH1 NH2 REMARK 470 HIS T 554 CG ND1 CD2 CE1 NE2 REMARK 470 GLN T 567 CG CD OE1 NE2 REMARK 470 HIS T 573 CG ND1 CD2 CE1 NE2 REMARK 470 ASP T 575 CG OD1 OD2 REMARK 470 LEU T 583 CG CD1 CD2 REMARK 470 PRO S 2 CG CD REMARK 470 ILE S 4 CG1 CG2 CD1 REMARK 470 LYS S 5 CG CD CE NZ REMARK 470 GLU S 15 CG CD OE1 OE2 REMARK 470 VAL S 18 CG1 CG2 REMARK 470 GLU S 19 CG CD OE1 OE2 REMARK 470 ILE S 20 CG1 CG2 CD1 REMARK 470 MET S 30 CG SD CE REMARK 470 LEU S 31 CG CD1 CD2 REMARK 470 LYS S 50 CG CD CE NZ REMARK 470 LYS S 60 CG CD CE NZ REMARK 470 GLU S 73 CG CD OE1 OE2 REMARK 470 LYS S 76 CG CD CE NZ REMARK 470 LYS S 103 CG CD CE NZ REMARK 470 LYS S 110 CG CD CE NZ REMARK 470 PHE S 127 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU S 130 CG CD OE1 OE2 REMARK 470 GLU S 131 CG CD OE1 OE2 REMARK 470 GLU S 132 CG CD OE1 OE2 REMARK 470 GLN S 134 CG CD OE1 NE2 REMARK 470 ARG S 136 CG CD NE CZ NH1 NH2 REMARK 470 LYS S 137 CG CD CE NZ REMARK 470 GLU S 138 CG CD OE1 OE2 REMARK 470 ASN S 139 CG OD1 ND2 REMARK 470 ASN C 192 CG OD1 ND2 REMARK 470 LYS C 298 CG CD CE NZ REMARK 470 GLU C 306 CG CD OE1 OE2 REMARK 470 LYS C 645 CG CD CE NZ REMARK 470 LYS D 4 CG CD CE NZ REMARK 470 ARG D 90 CG CD NE CZ NH1 NH2 REMARK 470 ASN D 114 CG OD1 ND2 REMARK 470 ASP D 116 CG OD1 OD2 REMARK 470 ASP D 117 CG OD1 OD2 REMARK 470 GLU D 122 CG CD OE1 OE2 REMARK 470 LYS D 128 CG CD CE NZ REMARK 470 ARG D 131 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 132 CG CD OE1 OE2 REMARK 470 LYS U 11 CG CD CE NZ REMARK 470 GLU U 24 CG CD OE1 OE2 REMARK 470 LYS U 33 CG CD CE NZ REMARK 470 LYS U 63 CG CD CE NZ REMARK 470 ARG U 74 CG CD NE CZ NH1 NH2 REMARK 470 LYS I 21 CG CD CE NZ REMARK 470 LYS I 22 CG CD CE NZ REMARK 470 GLU I 23 CG CD OE1 OE2 REMARK 470 ARG I 29 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS C 720 C GLY N 76 1.31 REMARK 500 C GLY U 75 N CYS I 20 1.34 REMARK 500 OD1 ASP C 396 OH TYR C 455 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE T 181 -19.13 -49.05 REMARK 500 ASN T 265 -10.93 71.76 REMARK 500 CYS T 298 -155.64 -150.27 REMARK 500 LEU T 320 -176.95 -69.32 REMARK 500 SER T 572 -169.84 -127.31 REMARK 500 ASP T 575 72.20 54.75 REMARK 500 ARG C 34 91.49 -67.93 REMARK 500 GLU C 148 -5.85 -58.87 REMARK 500 CYS C 149 71.63 52.19 REMARK 500 ARG C 168 43.12 -78.15 REMARK 500 THR C 198 -8.43 68.76 REMARK 500 ASN C 214 56.36 -96.31 REMARK 500 VAL C 277 -61.16 -93.03 REMARK 500 ASP C 314 32.43 -93.74 REMARK 500 CYS C 355 10.90 -141.55 REMARK 500 SER C 415 1.55 -67.33 REMARK 500 HIS C 476 2.66 -67.45 REMARK 500 ASN C 527 -168.78 -78.44 REMARK 500 GLU C 529 76.56 -160.55 REMARK 500 SER C 542 3.52 -66.75 REMARK 500 SER C 550 27.10 -144.07 REMARK 500 LEU C 555 78.24 55.34 REMARK 500 PHE C 595 -167.96 -79.60 REMARK 500 LYS C 645 45.68 -79.80 REMARK 500 SER C 646 -173.37 -170.95 REMARK 500 LYS C 723 -11.96 76.38 REMARK 500 PRO N 38 0.81 -69.38 REMARK 500 TRP R 35 -168.23 -79.93 REMARK 500 ILE R 37 -54.81 -127.11 REMARK 500 ALA R 43 6.28 -66.66 REMARK 500 ILE R 44 -64.72 -101.63 REMARK 500 ARG R 46 19.97 54.89 REMARK 500 CYS R 53 154.52 -48.72 REMARK 500 ASN R 76 9.79 82.59 REMARK 500 PHE R 103 -167.33 -79.70 REMARK 500 PRO D 18 -175.36 -67.91 REMARK 500 ASP D 29 99.53 -69.27 REMARK 500 TYR D 45 30.62 -92.11 REMARK 500 ASP D 59 41.96 -107.96 REMARK 500 ARG U 54 -168.01 -164.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN R 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS R 42 SG REMARK 620 2 CYS R 45 SG 120.2 REMARK 620 3 HIS R 80 ND1 108.1 106.2 REMARK 620 4 CYS R 83 SG 111.2 107.4 102.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN R 203 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS R 53 SG REMARK 620 2 CYS R 56 SG 112.1 REMARK 620 3 CYS R 68 SG 107.4 115.8 REMARK 620 4 HIS R 82 ND1 115.3 100.1 106.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN R 202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS R 75 SG REMARK 620 2 HIS R 77 ND1 108.3 REMARK 620 3 CYS R 94 SG 116.8 115.0 REMARK 620 4 ASP R 97 OD2 96.1 102.4 115.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN R 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN R 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN R 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-10578 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-10579 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-10580 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-10581 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-10582 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-10583 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-10585 RELATED DB: EMDB REMARK 900 UBIQUITIN LIGATION TO SUBSTRATE BY A CULLIN-RING E3 LIGASE AT 3.7A REMARK 900 RESOLUTION: NEDD8-CUL1-RBX1 N98R-SKP1-MONOMERIC B-TRCP1DD-IKBA-UB~ REMARK 900 UBE2D2 DBREF 6TTU T 1 605 UNP Q9Y297 FBW1A_HUMAN 1 605 DBREF 6TTU S 1 145 UNP P63208 SKP1_HUMAN 1 163 DBREF 6TTU C 1 776 UNP Q13616 CUL1_HUMAN 1 776 DBREF 6TTU N 1 76 UNP Q15843 NEDD8_HUMAN 1 76 DBREF 6TTU R 1 108 UNP P62877 RBX1_HUMAN 1 108 DBREF 6TTU D 1 147 UNP P62837 UB2D2_HUMAN 1 147 DBREF 6TTU U 1 76 UNP P0CG48 UBC_HUMAN 1 76 DBREF 6TTU I 20 49 PDB 6TTU 6TTU 20 49 SEQADV 6TTU SER N 0 UNP Q15843 EXPRESSION TAG SEQADV 6TTU ARG R 98 UNP P62877 ASN 98 ENGINEERED MUTATION SEQADV 6TTU ILE D 21 UNP P62837 CYS 21 ENGINEERED MUTATION SEQADV 6TTU ALA D 107 UNP P62837 CYS 107 ENGINEERED MUTATION SEQADV 6TTU ASP D 111 UNP P62837 CYS 111 ENGINEERED MUTATION SEQRES 1 T 605 MET ASP PRO ALA GLU ALA VAL LEU GLN GLU LYS ALA LEU SEQRES 2 T 605 LYS PHE MET CYS SER MET PRO ARG SER LEU TRP LEU GLY SEQRES 3 T 605 CYS SER SER LEU ALA ASP SER MET PRO SER LEU ARG CYS SEQRES 4 T 605 LEU TYR ASN PRO GLY THR GLY ALA LEU THR ALA PHE GLN SEQRES 5 T 605 ASN SER SER GLU ARG GLU ASP CYS ASN ASN GLY GLU PRO SEQRES 6 T 605 PRO ARG LYS ILE ILE PRO GLU LYS ASN SER LEU ARG GLN SEQRES 7 T 605 THR TYR ASN SER CYS ALA ARG LEU CYS LEU ASN GLN GLU SEQRES 8 T 605 THR VAL CYS LEU ALA SER THR ALA MET LYS THR GLU ASN SEQRES 9 T 605 CYS VAL ALA LYS THR LYS LEU ALA ASN GLY THR SER SER SEQRES 10 T 605 MET ILE VAL PRO LYS GLN ARG LYS LEU SER ALA SER TYR SEQRES 11 T 605 GLU LYS GLU LYS GLU LEU CYS VAL LYS TYR PHE GLU GLN SEQRES 12 T 605 TRP SER GLU SER ASP GLN VAL GLU PHE VAL GLU HIS LEU SEQRES 13 T 605 ILE SER GLN MET CYS HIS TYR GLN HIS GLY HIS ILE ASN SEQRES 14 T 605 SER TYR LEU LYS PRO MET LEU GLN ARG ASP PHE ILE THR SEQRES 15 T 605 ALA LEU PRO ALA ARG GLY LEU ASP HIS ILE ALA GLU ASN SEQRES 16 T 605 ILE LEU SER TYR LEU ASP ALA LYS SER LEU CYS ALA ALA SEQRES 17 T 605 GLU LEU VAL CYS LYS GLU TRP TYR ARG VAL THR SER ASP SEQRES 18 T 605 GLY MET LEU TRP LYS LYS LEU ILE GLU ARG MET VAL ARG SEQRES 19 T 605 THR ASP SER LEU TRP ARG GLY LEU ALA GLU ARG ARG GLY SEQRES 20 T 605 TRP GLY GLN TYR LEU PHE LYS ASN LYS PRO PRO ASP GLY SEQRES 21 T 605 ASN ALA PRO PRO ASN SER PHE TYR ARG ALA LEU TYR PRO SEQRES 22 T 605 LYS ILE ILE GLN ASP ILE GLU THR ILE GLU SER ASN TRP SEQRES 23 T 605 ARG CYS GLY ARG HIS SER LEU GLN ARG ILE HIS CYS ARG SEQRES 24 T 605 SER GLU THR SER LYS GLY VAL TYR CYS LEU GLN TYR ASP SEQRES 25 T 605 ASP GLN LYS ILE VAL SER GLY LEU ARG ASP ASN THR ILE SEQRES 26 T 605 LYS ILE TRP ASP LYS ASN THR LEU GLU CYS LYS ARG ILE SEQRES 27 T 605 LEU THR GLY HIS THR GLY SER VAL LEU CYS LEU GLN TYR SEQRES 28 T 605 ASP GLU ARG VAL ILE ILE THR GLY SER SER ASP SER THR SEQRES 29 T 605 VAL ARG VAL TRP ASP VAL ASN THR GLY GLU MET LEU ASN SEQRES 30 T 605 THR LEU ILE HIS HIS CYS GLU ALA VAL LEU HIS LEU ARG SEQRES 31 T 605 PHE ASN ASN GLY MET MET VAL THR CYS SER LYS ASP ARG SEQRES 32 T 605 SER ILE ALA VAL TRP ASP MET ALA SER PRO THR ASP ILE SEQRES 33 T 605 THR LEU ARG ARG VAL LEU VAL GLY HIS ARG ALA ALA VAL SEQRES 34 T 605 ASN VAL VAL ASP PHE ASP ASP LYS TYR ILE VAL SER ALA SEQRES 35 T 605 SER GLY ASP ARG THR ILE LYS VAL TRP ASN THR SER THR SEQRES 36 T 605 CYS GLU PHE VAL ARG THR LEU ASN GLY HIS LYS ARG GLY SEQRES 37 T 605 ILE ALA CYS LEU GLN TYR ARG ASP ARG LEU VAL VAL SER SEQRES 38 T 605 GLY SER SER ASP ASN THR ILE ARG LEU TRP ASP ILE GLU SEQRES 39 T 605 CYS GLY ALA CYS LEU ARG VAL LEU GLU GLY HIS GLU GLU SEQRES 40 T 605 LEU VAL ARG CYS ILE ARG PHE ASP ASN LYS ARG ILE VAL SEQRES 41 T 605 SER GLY ALA TYR ASP GLY LYS ILE LYS VAL TRP ASP LEU SEQRES 42 T 605 VAL ALA ALA LEU ASP PRO ARG ALA PRO ALA GLY THR LEU SEQRES 43 T 605 CYS LEU ARG THR LEU VAL GLU HIS SER GLY ARG VAL PHE SEQRES 44 T 605 ARG LEU GLN PHE ASP GLU PHE GLN ILE VAL SER SER SER SEQRES 45 T 605 HIS ASP ASP THR ILE LEU ILE TRP ASP PHE LEU ASN ASP SEQRES 46 T 605 PRO ALA ALA GLN ALA GLU PRO PRO ARG SER PRO SER ARG SEQRES 47 T 605 THR TYR THR TYR ILE SER ARG SEQRES 1 S 163 MET PRO SER ILE LYS LEU GLN SER SER ASP GLY GLU ILE SEQRES 2 S 163 PHE GLU VAL ASP VAL GLU ILE ALA LYS GLN SER VAL THR SEQRES 3 S 163 ILE LYS THR MET LEU GLU ASP LEU GLY MET ASP ASP GLU SEQRES 4 S 163 GLY ASP ASP ASP PRO VAL PRO LEU PRO ASN VAL ASN ALA SEQRES 5 S 163 ALA ILE LEU LYS LYS VAL ILE GLN TRP CYS THR HIS HIS SEQRES 6 S 163 LYS ASP ASP PRO PRO PRO PRO GLU ASP ASP GLU ASN LYS SEQRES 7 S 163 GLU LYS ARG THR ASP ASP ILE PRO VAL TRP ASP GLN GLU SEQRES 8 S 163 PHE LEU LYS VAL ASP GLN GLY THR LEU PHE GLU LEU ILE SEQRES 9 S 163 LEU ALA ALA ASN TYR LEU ASP ILE LYS GLY LEU LEU ASP SEQRES 10 S 163 VAL THR CYS LYS THR VAL ALA ASN MET ILE LYS GLY LYS SEQRES 11 S 163 THR PRO GLU GLU ILE ARG LYS THR PHE ASN ILE LYS ASN SEQRES 12 S 163 ASP PHE THR GLU GLU GLU GLU ALA GLN VAL ARG LYS GLU SEQRES 13 S 163 ASN GLN TRP CYS GLU GLU LYS SEQRES 1 C 776 MET SER SER THR ARG SER GLN ASN PRO HIS GLY LEU LYS SEQRES 2 C 776 GLN ILE GLY LEU ASP GLN ILE TRP ASP ASP LEU ARG ALA SEQRES 3 C 776 GLY ILE GLN GLN VAL TYR THR ARG GLN SER MET ALA LYS SEQRES 4 C 776 SER ARG TYR MET GLU LEU TYR THR HIS VAL TYR ASN TYR SEQRES 5 C 776 CYS THR SER VAL HIS GLN SER ASN GLN ALA ARG GLY ALA SEQRES 6 C 776 GLY VAL PRO PRO SER LYS SER LYS LYS GLY GLN THR PRO SEQRES 7 C 776 GLY GLY ALA GLN PHE VAL GLY LEU GLU LEU TYR LYS ARG SEQRES 8 C 776 LEU LYS GLU PHE LEU LYS ASN TYR LEU THR ASN LEU LEU SEQRES 9 C 776 LYS ASP GLY GLU ASP LEU MET ASP GLU SER VAL LEU LYS SEQRES 10 C 776 PHE TYR THR GLN GLN TRP GLU ASP TYR ARG PHE SER SER SEQRES 11 C 776 LYS VAL LEU ASN GLY ILE CYS ALA TYR LEU ASN ARG HIS SEQRES 12 C 776 TRP VAL ARG ARG GLU CYS ASP GLU GLY ARG LYS GLY ILE SEQRES 13 C 776 TYR GLU ILE TYR SER LEU ALA LEU VAL THR TRP ARG ASP SEQRES 14 C 776 CYS LEU PHE ARG PRO LEU ASN LYS GLN VAL THR ASN ALA SEQRES 15 C 776 VAL LEU LYS LEU ILE GLU LYS GLU ARG ASN GLY GLU THR SEQRES 16 C 776 ILE ASN THR ARG LEU ILE SER GLY VAL VAL GLN SER TYR SEQRES 17 C 776 VAL GLU LEU GLY LEU ASN GLU ASP ASP ALA PHE ALA LYS SEQRES 18 C 776 GLY PRO THR LEU THR VAL TYR LYS GLU SER PHE GLU SER SEQRES 19 C 776 GLN PHE LEU ALA ASP THR GLU ARG PHE TYR THR ARG GLU SEQRES 20 C 776 SER THR GLU PHE LEU GLN GLN ASN PRO VAL THR GLU TYR SEQRES 21 C 776 MET LYS LYS ALA GLU ALA ARG LEU LEU GLU GLU GLN ARG SEQRES 22 C 776 ARG VAL GLN VAL TYR LEU HIS GLU SER THR GLN ASP GLU SEQRES 23 C 776 LEU ALA ARG LYS CYS GLU GLN VAL LEU ILE GLU LYS HIS SEQRES 24 C 776 LEU GLU ILE PHE HIS THR GLU PHE GLN ASN LEU LEU ASP SEQRES 25 C 776 ALA ASP LYS ASN GLU ASP LEU GLY ARG MET TYR ASN LEU SEQRES 26 C 776 VAL SER ARG ILE GLN ASP GLY LEU GLY GLU LEU LYS LYS SEQRES 27 C 776 LEU LEU GLU THR HIS ILE HIS ASN GLN GLY LEU ALA ALA SEQRES 28 C 776 ILE GLU LYS CYS GLY GLU ALA ALA LEU ASN ASP PRO LYS SEQRES 29 C 776 MET TYR VAL GLN THR VAL LEU ASP VAL HIS LYS LYS TYR SEQRES 30 C 776 ASN ALA LEU VAL MET SER ALA PHE ASN ASN ASP ALA GLY SEQRES 31 C 776 PHE VAL ALA ALA LEU ASP LYS ALA CYS GLY ARG PHE ILE SEQRES 32 C 776 ASN ASN ASN ALA VAL THR LYS MET ALA GLN SER SER SER SEQRES 33 C 776 LYS SER PRO GLU LEU LEU ALA ARG TYR CYS ASP SER LEU SEQRES 34 C 776 LEU LYS LYS SER SER LYS ASN PRO GLU GLU ALA GLU LEU SEQRES 35 C 776 GLU ASP THR LEU ASN GLN VAL MET VAL VAL PHE LYS TYR SEQRES 36 C 776 ILE GLU ASP LYS ASP VAL PHE GLN LYS PHE TYR ALA LYS SEQRES 37 C 776 MET LEU ALA LYS ARG LEU VAL HIS GLN ASN SER ALA SER SEQRES 38 C 776 ASP ASP ALA GLU ALA SER MET ILE SER LYS LEU LYS GLN SEQRES 39 C 776 ALA CYS GLY PHE GLU TYR THR SER LYS LEU GLN ARG MET SEQRES 40 C 776 PHE GLN ASP ILE GLY VAL SER LYS ASP LEU ASN GLU GLN SEQRES 41 C 776 PHE LYS LYS HIS LEU THR ASN SER GLU PRO LEU ASP LEU SEQRES 42 C 776 ASP PHE SER ILE GLN VAL LEU SER SER GLY SER TRP PRO SEQRES 43 C 776 PHE GLN GLN SER CYS THR PHE ALA LEU PRO SER GLU LEU SEQRES 44 C 776 GLU ARG SER TYR GLN ARG PHE THR ALA PHE TYR ALA SER SEQRES 45 C 776 ARG HIS SER GLY ARG LYS LEU THR TRP LEU TYR GLN LEU SEQRES 46 C 776 SER LYS GLY GLU LEU VAL THR ASN CYS PHE LYS ASN ARG SEQRES 47 C 776 TYR THR LEU GLN ALA SER THR PHE GLN MET ALA ILE LEU SEQRES 48 C 776 LEU GLN TYR ASN THR GLU ASP ALA TYR THR VAL GLN GLN SEQRES 49 C 776 LEU THR ASP SER THR GLN ILE LYS MET ASP ILE LEU ALA SEQRES 50 C 776 GLN VAL LEU GLN ILE LEU LEU LYS SER LYS LEU LEU VAL SEQRES 51 C 776 LEU GLU ASP GLU ASN ALA ASN VAL ASP GLU VAL GLU LEU SEQRES 52 C 776 LYS PRO ASP THR LEU ILE LYS LEU TYR LEU GLY TYR LYS SEQRES 53 C 776 ASN LYS LYS LEU ARG VAL ASN ILE ASN VAL PRO MET LYS SEQRES 54 C 776 THR GLU GLN LYS GLN GLU GLN GLU THR THR HIS LYS ASN SEQRES 55 C 776 ILE GLU GLU ASP ARG LYS LEU LEU ILE GLN ALA ALA ILE SEQRES 56 C 776 VAL ARG ILE MET LYS MET ARG LYS VAL LEU LYS HIS GLN SEQRES 57 C 776 GLN LEU LEU GLY GLU VAL LEU THR GLN LEU SER SER ARG SEQRES 58 C 776 PHE LYS PRO ARG VAL PRO VAL ILE LYS LYS CYS ILE ASP SEQRES 59 C 776 ILE LEU ILE GLU LYS GLU TYR LEU GLU ARG VAL ASP GLY SEQRES 60 C 776 GLU LYS ASP THR TYR SER TYR LEU ALA SEQRES 1 N 77 SER MET LEU ILE LYS VAL LYS THR LEU THR GLY LYS GLU SEQRES 2 N 77 ILE GLU ILE ASP ILE GLU PRO THR ASP LYS VAL GLU ARG SEQRES 3 N 77 ILE LYS GLU ARG VAL GLU GLU LYS GLU GLY ILE PRO PRO SEQRES 4 N 77 GLN GLN GLN ARG LEU ILE TYR SER GLY LYS GLN MET ASN SEQRES 5 N 77 ASP GLU LYS THR ALA ALA ASP TYR LYS ILE LEU GLY GLY SEQRES 6 N 77 SER VAL LEU HIS LEU VAL LEU ALA LEU ARG GLY GLY SEQRES 1 R 108 MET ALA ALA ALA MET ASP VAL ASP THR PRO SER GLY THR SEQRES 2 R 108 ASN SER GLY ALA GLY LYS LYS ARG PHE GLU VAL LYS LYS SEQRES 3 R 108 TRP ASN ALA VAL ALA LEU TRP ALA TRP ASP ILE VAL VAL SEQRES 4 R 108 ASP ASN CYS ALA ILE CYS ARG ASN HIS ILE MET ASP LEU SEQRES 5 R 108 CYS ILE GLU CYS GLN ALA ASN GLN ALA SER ALA THR SER SEQRES 6 R 108 GLU GLU CYS THR VAL ALA TRP GLY VAL CYS ASN HIS ALA SEQRES 7 R 108 PHE HIS PHE HIS CYS ILE SER ARG TRP LEU LYS THR ARG SEQRES 8 R 108 GLN VAL CYS PRO LEU ASP ARG ARG GLU TRP GLU PHE GLN SEQRES 9 R 108 LYS TYR GLY HIS SEQRES 1 D 147 MET ALA LEU LYS ARG ILE HIS LYS GLU LEU ASN ASP LEU SEQRES 2 D 147 ALA ARG ASP PRO PRO ALA GLN ILE SER ALA GLY PRO VAL SEQRES 3 D 147 GLY ASP ASP MET PHE HIS TRP GLN ALA THR ILE MET GLY SEQRES 4 D 147 PRO ASN ASP SER PRO TYR GLN GLY GLY VAL PHE PHE LEU SEQRES 5 D 147 THR ILE HIS PHE PRO THR ASP TYR PRO PHE LYS PRO PRO SEQRES 6 D 147 LYS VAL ALA PHE THR THR ARG ILE TYR HIS PRO ASN ILE SEQRES 7 D 147 ASN SER ASN GLY SER ILE CYS LEU ASP ILE LEU ARG SER SEQRES 8 D 147 GLN TRP SER PRO ALA LEU THR ILE SER LYS VAL LEU LEU SEQRES 9 D 147 SER ILE ALA SER LEU LEU ASP ASP PRO ASN PRO ASP ASP SEQRES 10 D 147 PRO LEU VAL PRO GLU ILE ALA ARG ILE TYR LYS THR ASP SEQRES 11 D 147 ARG GLU LYS TYR ASN ARG ILE ALA ARG GLU TRP THR GLN SEQRES 12 D 147 LYS TYR ALA MET SEQRES 1 U 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 U 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 U 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 U 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 U 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 U 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY GLY SEQRES 1 I 30 CYS LYS LYS GLU ARG LEU LEU ASP ASP ARG HIS ASP SEP SEQRES 2 I 30 GLY LEU ASP SEP MET LYS ASP GLU GLU ASP TYR LYS ASP SEQRES 3 I 30 ASP ASP ASP LYS HET SEP I 32 10 HET ZN R 201 1 HET ZN R 202 1 HET ZN R 203 1 HETNAM SEP PHOSPHOSERINE HETNAM ZN ZINC ION HETSYN SEP PHOSPHONOSERINE FORMUL 8 SEP C3 H8 N O6 P FORMUL 9 ZN 3(ZN 2+) HELIX 1 AA1 ASP T 179 ARG T 187 1 9 HELIX 2 AA2 LEU T 189 TYR T 199 1 11 HELIX 3 AA3 ASP T 201 LEU T 210 1 10 HELIX 4 AA4 CYS T 212 GLY T 222 1 11 HELIX 5 AA5 MET T 223 ASP T 236 1 14 HELIX 6 AA6 ASP T 236 GLY T 247 1 12 HELIX 7 AA7 TRP T 248 LEU T 252 5 5 HELIX 8 AA8 ASN T 265 GLY T 289 1 25 HELIX 9 AA9 LEU T 533 ASP T 538 1 6 HELIX 10 AB1 PRO T 542 THR T 545 5 4 HELIX 11 AB2 VAL S 18 LYS S 22 1 5 HELIX 12 AB3 SER S 24 LEU S 31 1 8 HELIX 13 AB4 ASN S 45 HIS S 59 1 15 HELIX 14 AB5 VAL S 69 LYS S 76 1 8 HELIX 15 AB6 ASP S 78 ASP S 93 1 16 HELIX 16 AB7 ILE S 94 MET S 108 1 15 HELIX 17 AB8 THR S 113 ASN S 122 1 10 HELIX 18 AB9 GLU S 131 GLU S 138 1 8 HELIX 19 AC1 LEU C 17 THR C 33 1 17 HELIX 20 AC2 ALA C 38 CYS C 53 1 16 HELIX 21 AC3 GLY C 85 GLY C 107 1 23 HELIX 22 AC4 GLU C 113 CYS C 137 1 25 HELIX 23 AC5 CYS C 137 ARG C 146 1 10 HELIX 24 AC6 GLU C 158 ARG C 168 1 11 HELIX 25 AC7 LEU C 175 GLU C 190 1 16 HELIX 26 AC8 ARG C 191 GLY C 193 5 3 HELIX 27 AC9 ARG C 199 LEU C 211 1 13 HELIX 28 AD1 LEU C 225 LEU C 252 1 28 HELIX 29 AD2 PRO C 256 TYR C 278 1 23 HELIX 30 AD3 SER C 282 GLU C 297 1 16 HELIX 31 AD4 HIS C 299 ALA C 313 1 15 HELIX 32 AD5 LYS C 315 ILE C 329 1 15 HELIX 33 AD6 LEU C 333 LYS C 354 1 22 HELIX 34 AD7 CYS C 355 ALA C 359 5 5 HELIX 35 AD8 ASP C 362 ALA C 384 1 23 HELIX 36 AD9 GLY C 390 ASN C 405 1 16 HELIX 37 AE1 ASN C 406 MET C 411 1 6 HELIX 38 AE2 SER C 416 LYS C 431 1 16 HELIX 39 AE3 GLU C 438 TYR C 455 1 18 HELIX 40 AE4 ASP C 458 HIS C 476 1 19 HELIX 41 AE5 SER C 481 LEU C 525 1 45 HELIX 42 AE6 PRO C 556 ALA C 571 1 16 HELIX 43 AE7 SER C 604 TYR C 614 1 11 HELIX 44 AE8 VAL C 622 ASP C 627 1 6 HELIX 45 AE9 LYS C 632 LYS C 645 1 14 HELIX 46 AF1 GLU C 704 LYS C 723 1 20 HELIX 47 AF2 LYS C 726 SER C 739 1 14 HELIX 48 AF3 ARG C 745 LYS C 759 1 15 HELIX 49 AF4 LYS N 22 GLU N 32 1 11 HELIX 50 AF5 CYS R 53 ALA R 58 1 6 HELIX 51 AF6 PHE R 81 ARG R 91 1 11 HELIX 52 AF7 LEU D 3 ASP D 16 1 14 HELIX 53 AF8 ASP D 59 LYS D 63 5 5 HELIX 54 AF9 LEU D 86 SER D 91 1 6 HELIX 55 AG1 THR D 98 ASP D 112 1 15 HELIX 56 AG2 VAL D 120 ASP D 130 1 11 HELIX 57 AG3 GLU D 132 TYR D 145 1 14 HELIX 58 AG4 THR U 22 GLY U 35 1 14 HELIX 59 AG5 PRO U 37 GLN U 41 5 5 HELIX 60 AG6 THR U 55 ASN U 60 5 6 SHEET 1 AA1 4 CYS T 308 TYR T 311 0 SHEET 2 AA1 4 LYS T 315 GLY T 319 -1 O VAL T 317 N GLN T 310 SHEET 3 AA1 4 THR T 324 ASP T 329 -1 O TRP T 328 N ILE T 316 SHEET 4 AA1 4 CYS T 335 THR T 340 -1 O LEU T 339 N ILE T 325 SHEET 1 AA2 4 VAL T 346 TYR T 351 0 SHEET 2 AA2 4 VAL T 355 SER T 360 -1 O GLY T 359 N CYS T 348 SHEET 3 AA2 4 VAL T 365 ASP T 369 -1 O TRP T 368 N ILE T 356 SHEET 4 AA2 4 MET T 375 LEU T 379 -1 O LEU T 379 N VAL T 365 SHEET 1 AA3 4 VAL T 386 ASN T 392 0 SHEET 2 AA3 4 MET T 395 SER T 400 -1 O CYS T 399 N HIS T 388 SHEET 3 AA3 4 ILE T 405 SER T 412 -1 O TRP T 408 N MET T 396 SHEET 4 AA3 4 ASP T 415 LEU T 422 -1 O THR T 417 N ASP T 409 SHEET 1 AA4 4 VAL T 429 PHE T 434 0 SHEET 2 AA4 4 TYR T 438 SER T 443 -1 O ALA T 442 N VAL T 431 SHEET 3 AA4 4 THR T 447 ASN T 452 -1 O TRP T 451 N ILE T 439 SHEET 4 AA4 4 GLU T 457 ASN T 463 -1 O ARG T 460 N VAL T 450 SHEET 1 AA5 4 ILE T 469 ARG T 475 0 SHEET 2 AA5 4 LEU T 478 SER T 483 -1 O GLY T 482 N CYS T 471 SHEET 3 AA5 4 ILE T 488 ASP T 492 -1 O ARG T 489 N SER T 481 SHEET 4 AA5 4 CYS T 498 LEU T 502 -1 O ARG T 500 N LEU T 490 SHEET 1 AA6 4 VAL T 509 PHE T 514 0 SHEET 2 AA6 4 ARG T 518 ALA T 523 -1 O GLY T 522 N CYS T 511 SHEET 3 AA6 4 ILE T 528 ASP T 532 -1 O LYS T 529 N SER T 521 SHEET 4 AA6 4 CYS T 547 LEU T 551 -1 O LEU T 551 N ILE T 528 SHEET 1 AA7 3 ARG T 560 PHE T 563 0 SHEET 2 AA7 3 GLN T 567 SER T 571 -1 O VAL T 569 N GLN T 562 SHEET 3 AA7 3 LEU T 578 ASP T 581 -1 O TRP T 580 N ILE T 568 SHEET 1 AA8 3 ILE S 13 ASP S 17 0 SHEET 2 AA8 3 SER S 3 GLN S 7 -1 N ILE S 4 O VAL S 16 SHEET 3 AA8 3 VAL S 39 PRO S 40 1 O VAL S 39 N LYS S 5 SHEET 1 AA9 3 ASP C 534 SER C 541 0 SHEET 2 AA9 3 LYS R 26 TRP R 33 1 O ALA R 29 N GLN C 538 SHEET 3 AA9 3 THR C 580 LEU C 582 -1 N THR C 580 O LEU R 32 SHEET 1 AB1 3 TYR C 599 GLN C 602 0 SHEET 2 AB1 3 GLU C 589 THR C 592 -1 N THR C 592 O TYR C 599 SHEET 3 AB1 3 PHE R 22 VAL R 24 -1 O GLU R 23 N VAL C 591 SHEET 1 AB2 2 TYR C 620 THR C 621 0 SHEET 2 AB2 2 LEU C 668 ILE C 669 -1 O ILE C 669 N TYR C 620 SHEET 1 AB3 5 GLU N 12 ILE N 17 0 SHEET 2 AB3 5 MET N 1 LYS N 6 -1 N ILE N 3 O ILE N 15 SHEET 3 AB3 5 VAL N 66 LEU N 71 1 O LEU N 67 N LYS N 4 SHEET 4 AB3 5 GLN N 41 TYR N 45 -1 N ILE N 44 O HIS N 68 SHEET 5 AB3 5 LYS N 48 GLN N 49 -1 O LYS N 48 N TYR N 45 SHEET 1 AB4 2 VAL R 70 TRP R 72 0 SHEET 2 AB4 2 ALA R 78 HIS R 80 -1 O PHE R 79 N ALA R 71 SHEET 1 AB5 4 ILE D 21 PRO D 25 0 SHEET 2 AB5 4 HIS D 32 MET D 38 -1 O GLN D 34 N GLY D 24 SHEET 3 AB5 4 VAL D 49 HIS D 55 -1 O PHE D 50 N ILE D 37 SHEET 4 AB5 4 LYS D 66 PHE D 69 -1 O LYS D 66 N HIS D 55 SHEET 1 AB6 4 THR U 12 GLU U 16 0 SHEET 2 AB6 4 GLN U 2 LYS U 6 -1 N VAL U 5 O ILE U 13 SHEET 3 AB6 4 THR U 66 VAL U 70 1 O LEU U 67 N LYS U 6 SHEET 4 AB6 4 ARG U 42 ILE U 44 -1 N ILE U 44 O HIS U 68 SSBOND 1 CYS T 298 CYS T 335 1555 1555 2.05 SSBOND 2 CYS D 85 CYS I 20 1555 1555 2.01 LINK SG CYS R 42 ZN ZN R 201 1555 1555 2.31 LINK SG CYS R 45 ZN ZN R 201 1555 1555 2.31 LINK SG CYS R 53 ZN ZN R 203 1555 1555 2.35 LINK SG CYS R 56 ZN ZN R 203 1555 1555 2.37 LINK SG CYS R 68 ZN ZN R 203 1555 1555 2.32 LINK SG CYS R 75 ZN ZN R 202 1555 1555 2.32 LINK ND1 HIS R 77 ZN ZN R 202 1555 1555 2.03 LINK ND1 HIS R 80 ZN ZN R 201 1555 1555 2.03 LINK ND1 HIS R 82 ZN ZN R 203 1555 1555 2.03 LINK SG CYS R 83 ZN ZN R 201 1555 1555 2.32 LINK SG CYS R 94 ZN ZN R 202 1555 1555 2.31 LINK OD2 ASP R 97 ZN ZN R 202 1555 1555 2.00 LINK C ASP I 31 N SEP I 32 1555 1555 1.34 LINK C SEP I 32 N GLY I 33 1555 1555 1.34 SITE 1 AC1 4 CYS R 42 CYS R 45 HIS R 80 CYS R 83 SITE 1 AC2 4 CYS R 75 HIS R 77 CYS R 94 ASP R 97 SITE 1 AC3 4 CYS R 53 CYS R 56 CYS R 68 HIS R 82 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000