HEADER HYDROLASE 13-JAN-20 6TWJ TITLE APO STRUCTURE OF THE ECTOINE UTILIZATION PROTEIN EUTD (DOEA) FROM TITLE 2 HALOMONAS ELONGATA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ECTOINE HYDROLASE DOEA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PUTATIVE PEPTIDASE; COMPND 5 EC: 3.4.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOMONAS ELONGATA; SOURCE 3 ORGANISM_TAXID: 2746; SOURCE 4 GENE: DOEA, A8U91_03446, DKQ62_09665; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PITA BREAD, ECTOINE DEGRADATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.-N.MAIS,F.ALTEGOER,G.BANGE REVDAT 4 24-JAN-24 6TWJ 1 REMARK REVDAT 3 15-JUL-20 6TWJ 1 JRNL REVDAT 2 27-MAY-20 6TWJ 1 JRNL REVDAT 1 20-MAY-20 6TWJ 0 JRNL AUTH C.N.MAIS,L.HERMANN,F.ALTEGOER,A.SEUBERT,A.A.RICHTER, JRNL AUTH 2 I.WERNERSBACH,L.CZECH,E.BREMER,G.BANGE JRNL TITL DEGRADATION OF THE MICROBIAL STRESS PROTECTANTS AND CHEMICAL JRNL TITL 2 CHAPERONES ECTOINE AND HYDROXYECTOINE BY A BACTERIAL JRNL TITL 3 HYDROLASE-DEACETYLASE COMPLEX. JRNL REF J.BIOL.CHEM. V. 295 9087 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32404365 JRNL DOI 10.1074/JBC.RA120.012722 REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 47400 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.262 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.7200 - 5.5300 0.97 2676 141 0.2268 0.2410 REMARK 3 2 5.5300 - 4.3900 0.96 2614 138 0.2099 0.2504 REMARK 3 3 4.3900 - 3.8300 0.96 2624 138 0.1967 0.2214 REMARK 3 4 3.8300 - 3.4800 0.98 2651 140 0.1966 0.2239 REMARK 3 5 3.4800 - 3.2300 0.97 2605 137 0.2116 0.2575 REMARK 3 6 3.2300 - 3.0400 0.97 2627 138 0.2317 0.2723 REMARK 3 7 3.0400 - 2.8900 0.98 2648 139 0.2269 0.2770 REMARK 3 8 2.8900 - 2.7600 0.99 2674 141 0.2319 0.2975 REMARK 3 9 2.7600 - 2.6600 1.00 2681 141 0.2466 0.3013 REMARK 3 10 2.6600 - 2.5700 1.00 2682 141 0.2573 0.2730 REMARK 3 11 2.5700 - 2.4900 1.00 2688 142 0.2553 0.2881 REMARK 3 12 2.4900 - 2.4100 0.99 2648 139 0.2522 0.2811 REMARK 3 13 2.4100 - 2.3500 0.99 2691 142 0.2650 0.2771 REMARK 3 14 2.3500 - 2.2900 1.00 2668 141 0.2606 0.3466 REMARK 3 15 2.2900 - 2.2400 0.99 2685 141 0.2999 0.3383 REMARK 3 16 2.2400 - 2.1900 0.97 2588 136 0.3123 0.3421 REMARK 3 17 2.1900 - 2.1500 0.97 2579 136 0.3288 0.3616 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.311 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.478 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6344 REMARK 3 ANGLE : 0.761 8633 REMARK 3 CHIRALITY : 0.048 894 REMARK 3 PLANARITY : 0.006 1121 REMARK 3 DIHEDRAL : 5.923 858 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.7597 89.8461 32.8405 REMARK 3 T TENSOR REMARK 3 T11: 0.3365 T22: 0.2323 REMARK 3 T33: 0.2667 T12: -0.0324 REMARK 3 T13: -0.0015 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 4.0632 L22: 0.6061 REMARK 3 L33: 3.3716 L12: -0.0193 REMARK 3 L13: 0.1172 L23: 0.6197 REMARK 3 S TENSOR REMARK 3 S11: -0.0819 S12: -0.1820 S13: 0.0418 REMARK 3 S21: 0.0182 S22: -0.1522 S23: -0.1497 REMARK 3 S31: -0.2311 S32: -0.1734 S33: 0.2351 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0204 99.4964 33.3993 REMARK 3 T TENSOR REMARK 3 T11: 0.4340 T22: 0.2987 REMARK 3 T33: 0.2786 T12: -0.1034 REMARK 3 T13: 0.0319 T23: -0.0491 REMARK 3 L TENSOR REMARK 3 L11: 2.6136 L22: 2.0811 REMARK 3 L33: 2.3136 L12: -1.0867 REMARK 3 L13: -0.2304 L23: 0.3777 REMARK 3 S TENSOR REMARK 3 S11: 0.0897 S12: -0.2450 S13: 0.4651 REMARK 3 S21: -0.2474 S22: -0.0130 S23: -0.2279 REMARK 3 S31: -0.5003 S32: 0.2045 S33: -0.0363 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4972 90.2705 43.1651 REMARK 3 T TENSOR REMARK 3 T11: 0.3414 T22: 0.4493 REMARK 3 T33: 0.2931 T12: -0.0585 REMARK 3 T13: -0.0016 T23: -0.0194 REMARK 3 L TENSOR REMARK 3 L11: 1.5942 L22: 0.9124 REMARK 3 L33: 1.8218 L12: 0.2992 REMARK 3 L13: 0.9601 L23: 0.2763 REMARK 3 S TENSOR REMARK 3 S11: 0.0228 S12: -0.4953 S13: 0.1112 REMARK 3 S21: 0.1049 S22: -0.0555 S23: -0.0444 REMARK 3 S31: -0.2236 S32: 0.0044 S33: 0.0053 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 207 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6145 78.4541 7.7682 REMARK 3 T TENSOR REMARK 3 T11: 0.3116 T22: 0.3146 REMARK 3 T33: 0.2491 T12: -0.0414 REMARK 3 T13: -0.0417 T23: -0.0297 REMARK 3 L TENSOR REMARK 3 L11: 3.9107 L22: 1.1297 REMARK 3 L33: 1.1273 L12: -0.7968 REMARK 3 L13: -1.1616 L23: 0.2225 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: 0.5460 S13: -0.1508 REMARK 3 S21: -0.3161 S22: 0.0002 S23: 0.1128 REMARK 3 S31: 0.0659 S32: -0.0730 S33: 0.0387 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 208 THROUGH 260 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6058 75.7142 11.7969 REMARK 3 T TENSOR REMARK 3 T11: 0.3120 T22: 0.3118 REMARK 3 T33: 0.2209 T12: -0.0226 REMARK 3 T13: 0.0183 T23: -0.0418 REMARK 3 L TENSOR REMARK 3 L11: 3.0487 L22: 3.1795 REMARK 3 L33: 1.7136 L12: 0.2506 REMARK 3 L13: -1.0077 L23: 1.0674 REMARK 3 S TENSOR REMARK 3 S11: 0.0497 S12: 0.3720 S13: -0.1921 REMARK 3 S21: -0.1292 S22: -0.1361 S23: -0.0518 REMARK 3 S31: 0.3236 S32: -0.0485 S33: 0.0311 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 261 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8906 62.7230 13.1579 REMARK 3 T TENSOR REMARK 3 T11: 0.5134 T22: 0.3398 REMARK 3 T33: 0.5056 T12: 0.0724 REMARK 3 T13: 0.0288 T23: 0.0596 REMARK 3 L TENSOR REMARK 3 L11: 2.5774 L22: 0.5141 REMARK 3 L33: 2.3302 L12: 1.0100 REMARK 3 L13: -1.4651 L23: -0.2764 REMARK 3 S TENSOR REMARK 3 S11: -0.2794 S12: -0.0146 S13: -0.8925 REMARK 3 S21: -0.1815 S22: -0.2168 S23: -0.2624 REMARK 3 S31: 0.6884 S32: 0.3294 S33: 0.4492 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 298 THROUGH 317 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0130 58.4602 25.7444 REMARK 3 T TENSOR REMARK 3 T11: 0.3598 T22: 0.2031 REMARK 3 T33: 0.4500 T12: -0.0360 REMARK 3 T13: 0.0676 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 3.7698 L22: 4.3516 REMARK 3 L33: 5.5007 L12: -0.3993 REMARK 3 L13: -0.3568 L23: 1.4509 REMARK 3 S TENSOR REMARK 3 S11: 0.0089 S12: -0.1226 S13: 0.0936 REMARK 3 S21: 0.2890 S22: -0.0044 S23: 0.4260 REMARK 3 S31: 0.6945 S32: -0.0526 S33: -0.0376 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 318 THROUGH 362 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8798 71.7461 27.0033 REMARK 3 T TENSOR REMARK 3 T11: 0.2404 T22: 0.2020 REMARK 3 T33: 0.3085 T12: -0.0083 REMARK 3 T13: 0.0286 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 2.7376 L22: 1.4088 REMARK 3 L33: 1.8956 L12: 0.3112 REMARK 3 L13: 0.4797 L23: -1.2846 REMARK 3 S TENSOR REMARK 3 S11: -0.0593 S12: -0.0820 S13: -0.2351 REMARK 3 S21: 0.1884 S22: -0.0726 S23: 0.1854 REMARK 3 S31: 0.0252 S32: 0.1049 S33: 0.1155 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 363 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.5958 65.3400 14.5605 REMARK 3 T TENSOR REMARK 3 T11: 0.3822 T22: 0.3266 REMARK 3 T33: 0.3710 T12: 0.0225 REMARK 3 T13: -0.0022 T23: -0.0377 REMARK 3 L TENSOR REMARK 3 L11: 1.9669 L22: 3.2798 REMARK 3 L33: 3.6709 L12: 0.3368 REMARK 3 L13: -1.9588 L23: 0.6651 REMARK 3 S TENSOR REMARK 3 S11: -0.1348 S12: -0.2238 S13: -0.3765 REMARK 3 S21: -0.0592 S22: 0.2099 S23: -0.2092 REMARK 3 S31: 0.4043 S32: 0.5439 S33: -0.0453 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 297 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2067 86.0448 25.5499 REMARK 3 T TENSOR REMARK 3 T11: 0.2051 T22: 0.1947 REMARK 3 T33: 0.2208 T12: -0.0640 REMARK 3 T13: 0.0152 T23: -0.0435 REMARK 3 L TENSOR REMARK 3 L11: 1.6321 L22: 0.7370 REMARK 3 L33: 2.2237 L12: -0.4303 REMARK 3 L13: 0.7468 L23: -0.3652 REMARK 3 S TENSOR REMARK 3 S11: 0.0427 S12: -0.1236 S13: -0.1086 REMARK 3 S21: -0.0237 S22: 0.0200 S23: -0.0343 REMARK 3 S31: 0.1788 S32: -0.1560 S33: -0.0429 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 298 THROUGH 398 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.0234 103.9412 22.3480 REMARK 3 T TENSOR REMARK 3 T11: 0.2663 T22: 0.2447 REMARK 3 T33: 0.3702 T12: 0.0282 REMARK 3 T13: 0.0235 T23: -0.0498 REMARK 3 L TENSOR REMARK 3 L11: 0.7853 L22: 2.3552 REMARK 3 L33: 3.4219 L12: 1.1025 REMARK 3 L13: 0.4840 L23: 0.6282 REMARK 3 S TENSOR REMARK 3 S11: 0.0650 S12: -0.1089 S13: 0.2840 REMARK 3 S21: 0.1570 S22: -0.0824 S23: 0.0191 REMARK 3 S31: -0.4232 S32: -0.2540 S33: 0.0749 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TWJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292105582. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-SEP-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5-7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.966 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47539 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 47.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.62070 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.580 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2BWS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M TRISODIUM CITRATE, 20% (WT/VOL) REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.18500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.57000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.18500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 61.57000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 1 REMARK 465 ILE A 2 REMARK 465 GLY A 319 REMARK 465 PHE A 320 REMARK 465 ASP A 321 REMARK 465 ARG A 322 REMARK 465 GLY A 323 REMARK 465 GLY A 324 REMARK 465 ALA A 325 REMARK 465 ARG A 326 REMARK 465 MET B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 GLY B 1 REMARK 465 ILE B 2 REMARK 465 GLN B 3 REMARK 465 GLY B 319 REMARK 465 PHE B 320 REMARK 465 ASP B 321 REMARK 465 ARG B 322 REMARK 465 GLY B 323 REMARK 465 GLY B 324 REMARK 465 ALA B 325 REMARK 465 ARG B 326 REMARK 465 LYS B 399 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 513 O HOH B 538 1.81 REMARK 500 O HOH B 471 O HOH B 534 1.86 REMARK 500 O TYR A 95 O HOH A 401 1.93 REMARK 500 O HOH A 510 O HOH B 523 1.93 REMARK 500 OD2 ASP A 316 O HOH A 402 1.95 REMARK 500 O HOH B 418 O HOH B 503 1.96 REMARK 500 O HOH B 473 O HOH B 527 1.96 REMARK 500 O HOH A 502 O HOH A 516 1.96 REMARK 500 O HOH A 517 O HOH B 498 1.96 REMARK 500 NH2 ARG B 21 O GLY B 63 1.98 REMARK 500 O HOH A 472 O HOH B 533 1.98 REMARK 500 O HOH B 530 O HOH B 546 1.99 REMARK 500 O GLN B 395 O HOH B 401 2.00 REMARK 500 OE1 GLU A 166 O HOH A 403 2.01 REMARK 500 NH2 ARG A 21 O GLY A 63 2.02 REMARK 500 O HOH A 452 O HOH A 480 2.03 REMARK 500 O HOH A 433 O HOH A 452 2.04 REMARK 500 OE1 GLU B 166 O HOH B 402 2.06 REMARK 500 OE2 GLU A 377 O HOH A 404 2.07 REMARK 500 O HOH B 514 O HOH B 522 2.08 REMARK 500 NH1 ARG B 27 O HOH B 403 2.09 REMARK 500 OE2 GLU A 355 O HOH A 405 2.13 REMARK 500 O HOH B 403 O HOH B 483 2.15 REMARK 500 OE2 GLU A 284 O HOH A 406 2.16 REMARK 500 O PRO A 364 O HOH A 407 2.17 REMARK 500 O HOH B 501 O HOH B 526 2.17 REMARK 500 O HOH B 485 O HOH B 537 2.19 REMARK 500 NH1 ARG B 21 O GLY B 60 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 507 O HOH A 507 2556 2.06 REMARK 500 N SER B 349 O HOH A 402 4556 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 80 -35.63 -133.41 REMARK 500 GLN A 97 40.39 -140.16 REMARK 500 THR A 110 -56.60 -126.04 REMARK 500 TYR A 130 -2.87 76.59 REMARK 500 LEU A 228 57.35 -153.27 REMARK 500 THR A 240 -87.21 -95.47 REMARK 500 ARG A 262 -4.32 72.48 REMARK 500 THR A 343 -84.45 -124.13 REMARK 500 ASP A 370 -2.50 81.97 REMARK 500 GLU B 12 46.46 -86.82 REMARK 500 TYR B 13 -33.30 -138.30 REMARK 500 TYR B 130 -0.48 73.96 REMARK 500 THR B 240 -87.10 -99.71 REMARK 500 ARG B 262 -4.84 72.92 REMARK 500 THR B 343 -86.06 -124.18 REMARK 500 VAL B 368 -64.82 -109.33 REMARK 500 REMARK 500 REMARK: NULL DBREF1 6TWJ A 2 399 UNP A0A1B8NWR1_HALEL DBREF2 6TWJ A A0A1B8NWR1 2 399 DBREF1 6TWJ B 2 399 UNP A0A1B8NWR1_HALEL DBREF2 6TWJ B A0A1B8NWR1 2 399 SEQADV 6TWJ MET A -6 UNP A0A1B8NWR INITIATING METHIONINE SEQADV 6TWJ HIS A -5 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS A -4 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS A -3 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS A -2 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS A -1 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS A 0 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ GLY A 1 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ MET B -6 UNP A0A1B8NWR INITIATING METHIONINE SEQADV 6TWJ HIS B -5 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS B -4 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS B -3 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS B -2 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS B -1 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ HIS B 0 UNP A0A1B8NWR EXPRESSION TAG SEQADV 6TWJ GLY B 1 UNP A0A1B8NWR EXPRESSION TAG SEQRES 1 A 406 MET HIS HIS HIS HIS HIS HIS GLY ILE GLN VAL SER LEU SEQRES 2 A 406 PRO PHE THR ARG GLU GLU TYR ALA GLY ARG LEU TRP LYS SEQRES 3 A 406 VAL ARG THR GLU MET ALA SER ARG GLY ILE ASP VAL LEU SEQRES 4 A 406 VAL ILE SER ASP PRO SER ASN MET ALA TRP LEU THR GLY SEQRES 5 A 406 TYR ASP GLY TRP SER PHE TYR VAL HIS GLN CYS VAL LEU SEQRES 6 A 406 LEU GLY LEU GLU GLY GLU PRO VAL TRP TYR GLY ARG ARG SEQRES 7 A 406 MET ASP ALA ASN GLY ALA LEU ARG THR CYS TRP MET ASP SEQRES 8 A 406 PRO ASP ASN ILE THR TYR TYR PRO ASP HIS TYR VAL GLN SEQRES 9 A 406 ASN PRO ASP MET HIS PRO MET ASP TYR LEU ALA GLN THR SEQRES 10 A 406 ILE LEU PRO ASP ARG GLY TRP HIS GLU GLY VAL VAL GLY SEQRES 11 A 406 MET GLU MET ASP ASN TYR TYR PHE SER ALA LYS ALA TYR SEQRES 12 A 406 GLN CYS LEU LEU ARG GLU LEU PRO HIS ALA ARG PHE ALA SEQRES 13 A 406 ASP ALA ASN SER LEU VAL ASN TRP CYS ARG ALA ILE LYS SEQRES 14 A 406 SER PRO GLN GLU ILE GLU TYR MET ARG VAL ALA GLY LYS SEQRES 15 A 406 ILE VAL ALA GLY MET HIS SER ARG ILE LEU GLU VAL ILE SEQRES 16 A 406 GLU PRO GLY LEU PRO LYS SER LYS LEU VAL SER GLU ILE SEQRES 17 A 406 TYR ARG VAL GLY ILE GLU GLY TRP THR SER PRO GLU GLY SEQRES 18 A 406 LYS VAL PHE GLY GLY ASP TYR PRO ALA ILE VAL PRO MET SEQRES 19 A 406 LEU PRO THR GLY LYS ASP ALA ALA ALA PRO HIS LEU THR SEQRES 20 A 406 TRP ASP ASP SER PRO PHE ARG GLU GLY GLU GLY THR PHE SEQRES 21 A 406 PHE GLU ILE ALA GLY VAL TYR LYS ARG TYR HIS ALA PRO SEQRES 22 A 406 MET SER ARG THR VAL TYR LEU GLY ARG PRO PRO SER GLU SEQRES 23 A 406 PHE VAL ARG ALA GLU SER ALA LEU LEU GLU GLY ILE GLU SEQRES 24 A 406 ASN GLY LEU GLU VAL ALA LYS PRO GLY ASN ARG THR ALA SEQRES 25 A 406 ASP ILE ALA MET ALA LEU GLY ALA ALA MET ASP LYS TYR SEQRES 26 A 406 GLY PHE ASP ARG GLY GLY ALA ARG CYS GLY TYR PRO ILE SEQRES 27 A 406 GLY ILE SER TYR PRO PRO ASP TRP GLY GLU ARG THR MET SEQRES 28 A 406 SER LEU ARG PRO SER ASP GLU THR ILE LEU GLU PRO GLY SEQRES 29 A 406 MET THR PHE HIS PHE MET PRO GLY LEU TRP VAL GLU ASP SEQRES 30 A 406 TRP GLY LEU GLU ILE THR GLU SER ILE LEU ILE THR GLU SEQRES 31 A 406 SER GLY CYS GLU THR LEU ALA ASP PHE PRO ARG GLN LEU SEQRES 32 A 406 PHE VAL LYS SEQRES 1 B 406 MET HIS HIS HIS HIS HIS HIS GLY ILE GLN VAL SER LEU SEQRES 2 B 406 PRO PHE THR ARG GLU GLU TYR ALA GLY ARG LEU TRP LYS SEQRES 3 B 406 VAL ARG THR GLU MET ALA SER ARG GLY ILE ASP VAL LEU SEQRES 4 B 406 VAL ILE SER ASP PRO SER ASN MET ALA TRP LEU THR GLY SEQRES 5 B 406 TYR ASP GLY TRP SER PHE TYR VAL HIS GLN CYS VAL LEU SEQRES 6 B 406 LEU GLY LEU GLU GLY GLU PRO VAL TRP TYR GLY ARG ARG SEQRES 7 B 406 MET ASP ALA ASN GLY ALA LEU ARG THR CYS TRP MET ASP SEQRES 8 B 406 PRO ASP ASN ILE THR TYR TYR PRO ASP HIS TYR VAL GLN SEQRES 9 B 406 ASN PRO ASP MET HIS PRO MET ASP TYR LEU ALA GLN THR SEQRES 10 B 406 ILE LEU PRO ASP ARG GLY TRP HIS GLU GLY VAL VAL GLY SEQRES 11 B 406 MET GLU MET ASP ASN TYR TYR PHE SER ALA LYS ALA TYR SEQRES 12 B 406 GLN CYS LEU LEU ARG GLU LEU PRO HIS ALA ARG PHE ALA SEQRES 13 B 406 ASP ALA ASN SER LEU VAL ASN TRP CYS ARG ALA ILE LYS SEQRES 14 B 406 SER PRO GLN GLU ILE GLU TYR MET ARG VAL ALA GLY LYS SEQRES 15 B 406 ILE VAL ALA GLY MET HIS SER ARG ILE LEU GLU VAL ILE SEQRES 16 B 406 GLU PRO GLY LEU PRO LYS SER LYS LEU VAL SER GLU ILE SEQRES 17 B 406 TYR ARG VAL GLY ILE GLU GLY TRP THR SER PRO GLU GLY SEQRES 18 B 406 LYS VAL PHE GLY GLY ASP TYR PRO ALA ILE VAL PRO MET SEQRES 19 B 406 LEU PRO THR GLY LYS ASP ALA ALA ALA PRO HIS LEU THR SEQRES 20 B 406 TRP ASP ASP SER PRO PHE ARG GLU GLY GLU GLY THR PHE SEQRES 21 B 406 PHE GLU ILE ALA GLY VAL TYR LYS ARG TYR HIS ALA PRO SEQRES 22 B 406 MET SER ARG THR VAL TYR LEU GLY ARG PRO PRO SER GLU SEQRES 23 B 406 PHE VAL ARG ALA GLU SER ALA LEU LEU GLU GLY ILE GLU SEQRES 24 B 406 ASN GLY LEU GLU VAL ALA LYS PRO GLY ASN ARG THR ALA SEQRES 25 B 406 ASP ILE ALA MET ALA LEU GLY ALA ALA MET ASP LYS TYR SEQRES 26 B 406 GLY PHE ASP ARG GLY GLY ALA ARG CYS GLY TYR PRO ILE SEQRES 27 B 406 GLY ILE SER TYR PRO PRO ASP TRP GLY GLU ARG THR MET SEQRES 28 B 406 SER LEU ARG PRO SER ASP GLU THR ILE LEU GLU PRO GLY SEQRES 29 B 406 MET THR PHE HIS PHE MET PRO GLY LEU TRP VAL GLU ASP SEQRES 30 B 406 TRP GLY LEU GLU ILE THR GLU SER ILE LEU ILE THR GLU SEQRES 31 B 406 SER GLY CYS GLU THR LEU ALA ASP PHE PRO ARG GLN LEU SEQRES 32 B 406 PHE VAL LYS FORMUL 3 HOH *274(H2 O) HELIX 1 AA1 THR A 9 GLY A 28 1 20 HELIX 2 AA2 ASP A 36 GLY A 45 1 10 HELIX 3 AA3 ARG A 71 LEU A 78 1 8 HELIX 4 AA4 ASP A 84 ASP A 86 5 3 HELIX 5 AA5 PRO A 92 VAL A 96 5 5 HELIX 6 AA6 HIS A 102 THR A 110 1 9 HELIX 7 AA7 THR A 110 ARG A 115 1 6 HELIX 8 AA8 SER A 132 LEU A 143 1 12 HELIX 9 AA9 SER A 153 ARG A 159 1 7 HELIX 10 AB1 SER A 163 ILE A 188 1 26 HELIX 11 AB2 PRO A 193 GLY A 208 1 16 HELIX 12 AB3 THR A 230 ALA A 236 5 7 HELIX 13 AB4 PRO A 277 ALA A 298 1 22 HELIX 14 AB5 ARG A 303 TYR A 318 1 16 HELIX 15 AB6 ARG B 10 GLY B 28 1 19 HELIX 16 AB7 ASP B 36 GLY B 45 1 10 HELIX 17 AB8 ARG B 71 CYS B 81 1 11 HELIX 18 AB9 ASP B 84 ASP B 86 5 3 HELIX 19 AC1 PRO B 92 VAL B 96 5 5 HELIX 20 AC2 HIS B 102 THR B 110 1 9 HELIX 21 AC3 THR B 110 ARG B 115 1 6 HELIX 22 AC4 SER B 132 LEU B 143 1 12 HELIX 23 AC5 SER B 153 ARG B 159 1 7 HELIX 24 AC6 SER B 163 ILE B 188 1 26 HELIX 25 AC7 PRO B 193 GLY B 208 1 16 HELIX 26 AC8 THR B 230 ALA B 236 5 7 HELIX 27 AC9 PRO B 277 ALA B 298 1 22 HELIX 28 AD1 ARG B 303 TYR B 318 1 16 SHEET 1 AA1 6 ILE A 88 TYR A 91 0 SHEET 2 AA1 6 VAL A 66 ARG A 70 1 N TRP A 67 O THR A 89 SHEET 3 AA1 6 CYS A 56 LEU A 59 -1 N CYS A 56 O TYR A 68 SHEET 4 AA1 6 VAL A 31 ILE A 34 -1 N ILE A 34 O VAL A 57 SHEET 5 AA1 6 GLY A 120 MET A 124 1 O GLY A 123 N VAL A 31 SHEET 6 AA1 6 ALA A 146 ASP A 150 1 O ARG A 147 N GLY A 120 SHEET 1 AA2 2 TRP A 209 THR A 210 0 SHEET 2 AA2 2 VAL A 216 PHE A 217 -1 O PHE A 217 N TRP A 209 SHEET 1 AA3 3 GLU A 250 TYR A 260 0 SHEET 2 AA3 3 TYR A 263 LEU A 273 -1 O MET A 267 N ILE A 256 SHEET 3 AA3 3 PHE A 397 VAL A 398 1 O PHE A 397 N TYR A 272 SHEET 1 AA4 4 GLY A 328 PRO A 330 0 SHEET 2 AA4 4 THR A 359 PHE A 362 -1 O HIS A 361 N TYR A 329 SHEET 3 AA4 4 GLU A 377 ILE A 381 -1 O ILE A 379 N PHE A 360 SHEET 4 AA4 4 CYS A 386 THR A 388 -1 O GLU A 387 N LEU A 380 SHEET 1 AA5 2 LEU A 366 TRP A 367 0 SHEET 2 AA5 2 GLY A 372 LEU A 373 -1 O LEU A 373 N LEU A 366 SHEET 1 AA6 6 ILE B 88 TYR B 91 0 SHEET 2 AA6 6 VAL B 66 ARG B 70 1 N TRP B 67 O THR B 89 SHEET 3 AA6 6 CYS B 56 LEU B 59 -1 N CYS B 56 O TYR B 68 SHEET 4 AA6 6 VAL B 31 ILE B 34 -1 N ILE B 34 O VAL B 57 SHEET 5 AA6 6 GLY B 120 MET B 124 1 O GLY B 123 N VAL B 31 SHEET 6 AA6 6 ALA B 146 ASP B 150 1 O ARG B 147 N GLY B 120 SHEET 1 AA7 2 TRP B 209 THR B 210 0 SHEET 2 AA7 2 VAL B 216 PHE B 217 -1 O PHE B 217 N TRP B 209 SHEET 1 AA8 2 GLU B 250 TYR B 260 0 SHEET 2 AA8 2 TYR B 263 LEU B 273 -1 O VAL B 271 N THR B 252 SHEET 1 AA9 4 GLY B 328 PRO B 330 0 SHEET 2 AA9 4 THR B 359 PHE B 362 -1 O HIS B 361 N TYR B 329 SHEET 3 AA9 4 GLU B 377 ILE B 381 -1 O ILE B 379 N PHE B 360 SHEET 4 AA9 4 CYS B 386 THR B 388 -1 O GLU B 387 N LEU B 380 CISPEP 1 PRO A 336 PRO A 337 0 9.20 CISPEP 2 PRO B 336 PRO B 337 0 8.14 CRYST1 120.370 123.140 61.490 90.00 97.18 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008308 0.000000 0.001047 0.00000 SCALE2 0.000000 0.008121 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016391 0.00000