HEADER HYDROLASE 13-JAN-20 6TWL TITLE APO STRUCTURE OF THE ECTOINE UTILIZATION PROTEIN EUTE (DOEB) FROM TITLE 2 RUEGERIA POMEROYI COMPND MOL_ID: 1; COMPND 2 MOLECULE: N-ACETYL-L-2,4-DIAMINOBUTYRIC ACID DEACETYLASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUEGERIA POMEROYI (STRAIN ATCC 700808 / DSM SOURCE 3 15171 / DSS-3); SOURCE 4 ORGANISM_TAXID: 246200; SOURCE 5 GENE: DOEB, SPO1139; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PITA BREAD, ECTOINE DEGRADATION, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.-N.MAIS,F.ALTEGOER,G.BANGE REVDAT 4 24-JAN-24 6TWL 1 REMARK REVDAT 3 15-JUL-20 6TWL 1 JRNL REVDAT 2 27-MAY-20 6TWL 1 JRNL REVDAT 1 20-MAY-20 6TWL 0 JRNL AUTH C.N.MAIS,L.HERMANN,F.ALTEGOER,A.SEUBERT,A.A.RICHTER, JRNL AUTH 2 I.WERNERSBACH,L.CZECH,E.BREMER,G.BANGE JRNL TITL DEGRADATION OF THE MICROBIAL STRESS PROTECTANTS AND CHEMICAL JRNL TITL 2 CHAPERONES ECTOINE AND HYDROXYECTOINE BY A BACTERIAL JRNL TITL 3 HYDROLASE-DEACETYLASE COMPLEX. JRNL REF J.BIOL.CHEM. V. 295 9087 2020 JRNL REFN ESSN 1083-351X JRNL PMID 32404365 JRNL DOI 10.1074/JBC.RA120.012722 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 26963 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.295 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1350 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5400 - 4.3100 1.00 2797 148 0.2051 0.2473 REMARK 3 2 4.3100 - 3.4200 1.00 2625 138 0.2223 0.2795 REMARK 3 3 3.4200 - 2.9900 1.00 2587 136 0.2766 0.3507 REMARK 3 4 2.9900 - 2.7100 1.00 2571 136 0.2886 0.3159 REMARK 3 5 2.7100 - 2.5200 1.00 2532 134 0.2983 0.3499 REMARK 3 6 2.5200 - 2.3700 0.99 2520 133 0.3073 0.3528 REMARK 3 7 2.3700 - 2.2500 0.99 2484 130 0.3319 0.3716 REMARK 3 8 2.2500 - 2.1500 0.99 2498 132 0.4189 0.4487 REMARK 3 9 2.1500 - 2.0700 1.00 2518 132 0.4156 0.5097 REMARK 3 10 2.0700 - 2.0000 0.99 2481 131 0.4824 0.5184 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.363 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 41.465 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 61.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2376 REMARK 3 ANGLE : 0.913 3226 REMARK 3 CHIRALITY : 0.066 367 REMARK 3 PLANARITY : 0.006 424 REMARK 3 DIHEDRAL : 8.145 328 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.6284 -38.3448 15.5716 REMARK 3 T TENSOR REMARK 3 T11: 0.6904 T22: 0.6417 REMARK 3 T33: 0.5976 T12: 0.0081 REMARK 3 T13: -0.0548 T23: -0.0669 REMARK 3 L TENSOR REMARK 3 L11: 2.4631 L22: 3.3785 REMARK 3 L33: 3.4861 L12: -0.4234 REMARK 3 L13: -0.6007 L23: -0.2577 REMARK 3 S TENSOR REMARK 3 S11: -0.0736 S12: -0.1404 S13: -0.2124 REMARK 3 S21: 0.1189 S22: 0.0127 S23: -0.1882 REMARK 3 S31: 0.4685 S32: 0.0218 S33: 0.0529 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 88 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1029 -24.2893 11.3281 REMARK 3 T TENSOR REMARK 3 T11: 0.6324 T22: 0.8320 REMARK 3 T33: 0.6467 T12: 0.0172 REMARK 3 T13: -0.0675 T23: -0.0209 REMARK 3 L TENSOR REMARK 3 L11: 2.4388 L22: 3.1416 REMARK 3 L33: 2.2438 L12: 1.1042 REMARK 3 L13: -0.2389 L23: 2.4901 REMARK 3 S TENSOR REMARK 3 S11: -0.2494 S12: 0.3383 S13: 0.1934 REMARK 3 S21: -0.3229 S22: 0.1866 S23: -0.3390 REMARK 3 S31: -0.2385 S32: 0.3633 S33: 0.0355 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 194 THROUGH 281 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4421 -14.5024 18.5982 REMARK 3 T TENSOR REMARK 3 T11: 0.6227 T22: 0.7275 REMARK 3 T33: 0.6663 T12: 0.0357 REMARK 3 T13: -0.1115 T23: -0.0359 REMARK 3 L TENSOR REMARK 3 L11: 0.8226 L22: 2.9920 REMARK 3 L33: 1.1598 L12: 1.0484 REMARK 3 L13: 0.8502 L23: 1.8712 REMARK 3 S TENSOR REMARK 3 S11: -0.0805 S12: 0.0563 S13: 0.3053 REMARK 3 S21: -0.1504 S22: -0.0706 S23: 0.4438 REMARK 3 S31: -0.1763 S32: -0.0895 S33: 0.1820 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 282 THROUGH 328 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.4803 -2.3087 26.9468 REMARK 3 T TENSOR REMARK 3 T11: 0.6491 T22: 0.6434 REMARK 3 T33: 0.6479 T12: 0.0243 REMARK 3 T13: -0.0822 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.3754 L22: 3.5742 REMARK 3 L33: 3.1642 L12: 0.8218 REMARK 3 L13: 0.2238 L23: 0.2270 REMARK 3 S TENSOR REMARK 3 S11: -0.0890 S12: 0.4391 S13: 0.2723 REMARK 3 S21: -0.0206 S22: 0.0255 S23: 0.0341 REMARK 3 S31: -0.3533 S32: 0.7125 S33: 0.0068 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TWL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-JAN-20. REMARK 100 THE DEPOSITION ID IS D_1292105606. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97242 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27066 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 46.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 21.00 REMARK 200 R MERGE (I) : 0.06260 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3CDX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE PH 9.0, 20% (WT/VOL) PEG REMARK 280 6000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 67.31000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 67.31000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.31000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 67.31000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 67.31000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 67.31000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 16310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 66780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 49.59500 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -85.90106 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 99.19000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 67.31000 REMARK 350 BIOMT1 5 -1.000000 0.000000 0.000000 99.19000 REMARK 350 BIOMT2 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 67.31000 REMARK 350 BIOMT1 6 0.500000 0.866025 0.000000 49.59500 REMARK 350 BIOMT2 6 0.866025 -0.500000 0.000000 -85.90106 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 67.31000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 ARG A 28 REMARK 465 ASP A 29 REMARK 465 ASP A 30 REMARK 465 ARG A 100 REMARK 465 THR A 101 REMARK 465 SER A 102 REMARK 465 PRO A 103 REMARK 465 ILE A 104 REMARK 465 ASP A 105 REMARK 465 ARG A 106 REMARK 465 GLY A 107 REMARK 465 LEU A 160A REMARK 465 ARG A 291 REMARK 465 THR A 292 REMARK 465 GLY A 329 REMARK 465 ALA A 330 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 216 OD1 ASN A 221 2.08 REMARK 500 O ASP A 161 N LYS A 164 2.15 REMARK 500 N GLY A 64 O HOH A 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NH2 ARG A 219 OD2 ASP A 272 10555 1.29 REMARK 500 NH2 ARG A 219 CG ASP A 272 10555 1.47 REMARK 500 NH2 ARG A 219 CB ASP A 272 10555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 33 51.57 38.10 REMARK 500 ASP A 118 67.23 -101.83 REMARK 500 ASP A 163 -31.76 41.18 REMARK 500 LYS A 164 -168.38 -106.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 161 ASP A 163 127.82 REMARK 500 REMARK 500 REMARK: NULL DBREF 6TWL A 1 330 UNP Q5LUB5 Q5LUB5_RUEPO 1 330 SEQADV 6TWL ASP A 161 UNP Q5LUB5 GLU 162 CONFLICT SEQRES 1 A 330 MET GLN LYS ASN PRO ILE SER PRO THR ILE PRO LEU ASP SEQRES 2 A 330 ARG ASP GLY VAL PHE HIS GLY PHE LEU LYS LEU PRO HIS SEQRES 3 A 330 SER ARG ASP ASP SER ALA TRP GLY SER VAL MET ILE PRO SEQRES 4 A 330 LEU THR VAL ILE LYS ASN GLY ALA GLY PRO THR ALA LEU SEQRES 5 A 330 LEU THR GLY ALA ASN HIS GLY ASP GLU TYR GLU GLY PRO SEQRES 6 A 330 VAL ALA LEU HIS GLU LEU ALA ALA THR THR SER ALA GLU SEQRES 7 A 330 ASP VAL THR GLY ARG LEU ILE ILE VAL PRO ALA PHE ASN SEQRES 8 A 330 TYR PRO ALA PHE ARG ALA GLY SER ARG THR SER PRO ILE SEQRES 9 A 330 ASP ARG GLY ASN LEU ASN ARG SER PHE PRO GLY ARG PRO SEQRES 10 A 330 ASP GLY THR VAL THR GLU LYS ILE ALA ASP TYR PHE GLN SEQRES 11 A 330 ARG THR LEU LEU PRO MET ALA ASP LEU ALA VAL ASP PHE SEQRES 12 A 330 HIS SER GLY GLY LYS THR LEU ASP PHE VAL PRO PHE ALA SEQRES 13 A 330 ALA ALA HIS ILE LEU ASP ASP LYS ALA THR GLN ALA ALA SEQRES 14 A 330 CYS PHE ALA ALA MET LYS ALA PHE ASN ALA PRO TYR SER SEQRES 15 A 330 VAL GLU LEU LEU GLU ILE ASP SER ALA GLY MET TYR ASP SEQRES 16 A 330 THR ALA VAL GLU GLU MET GLY LYS VAL LEU VAL THR THR SEQRES 17 A 330 GLU LEU GLY GLY GLY GLY SER SER SER ALA ARG SER ASN SEQRES 18 A 330 ALA ILE ALA LYS LYS GLY LEU ARG ASN VAL LEU ILE HIS SEQRES 19 A 330 ALA GLY ILE LEU LYS GLY GLU MET GLN LEU ASP GLU THR SEQRES 20 A 330 VAL ASN LEU THR MET PRO ASP ASP ASP CYS PHE VAL PHE SEQRES 21 A 330 SER GLU GLY ASP GLY LEU PHE GLU MET MET ILE ASP LEU SEQRES 22 A 330 GLY ALA PRO VAL ALA LYS GLY ASP LEU LEU ALA ARG VAL SEQRES 23 A 330 TRP PRO LEU ASP ARG THR GLY GLN PRO PRO VAL GLU TYR SEQRES 24 A 330 ARG ALA ARG ARG ALA GLY LEU VAL ILE SER ARG HIS PHE SEQRES 25 A 330 PRO GLY LEU ILE LYS SER GLY ASP CYS VAL ALA VAL VAL SEQRES 26 A 330 GLY VAL THR GLY ALA FORMUL 2 HOH *14(H2 O) HELIX 1 AA1 TYR A 62 THR A 75 1 14 HELIX 2 AA2 SER A 76 VAL A 80 5 5 HELIX 3 AA3 ASN A 108 SER A 112 5 5 HELIX 4 AA4 THR A 120 THR A 132 1 13 HELIX 5 AA5 THR A 166 ASN A 178 1 13 HELIX 6 AA6 MET A 193 GLY A 202 1 10 HELIX 7 AA7 SER A 217 ALA A 235 1 19 HELIX 8 AA8 ASP A 254 ASP A 256 5 3 SHEET 1 AA110 SER A 7 PRO A 8 0 SHEET 2 AA110 GLY A 16 LEU A 24 -1 O LYS A 23 N SER A 7 SHEET 3 AA110 VAL A 36 ASN A 45 -1 O LEU A 40 N GLY A 20 SHEET 4 AA110 GLY A 82 VAL A 87 -1 O ILE A 86 N THR A 41 SHEET 5 AA110 THR A 50 THR A 54 1 N LEU A 53 O VAL A 87 SHEET 6 AA110 LEU A 139 ASP A 142 1 O LEU A 139 N LEU A 52 SHEET 7 AA110 VAL A 204 GLU A 209 1 O VAL A 204 N ALA A 140 SHEET 8 AA110 PHE A 155 ALA A 158 -1 N ALA A 157 O THR A 207 SHEET 9 AA110 TYR A 181 GLU A 184 1 O VAL A 183 N ALA A 156 SHEET 10 AA110 VAL A 248 THR A 251 1 O VAL A 248 N SER A 182 SHEET 1 AA2 4 LEU A 150 PHE A 152 0 SHEET 2 AA2 4 GLY A 305 HIS A 311 -1 O ARG A 310 N ASP A 151 SHEET 3 AA2 4 CYS A 321 GLY A 326 -1 O GLY A 326 N LEU A 306 SHEET 4 AA2 4 PHE A 258 PHE A 260 -1 N VAL A 259 O VAL A 322 SHEET 1 AA3 3 LEU A 150 PHE A 152 0 SHEET 2 AA3 3 GLY A 305 HIS A 311 -1 O ARG A 310 N ASP A 151 SHEET 3 AA3 3 PRO A 276 VAL A 277 -1 N VAL A 277 O GLY A 305 SHEET 1 AA4 4 VAL A 297 ARG A 300 0 SHEET 2 AA4 4 LEU A 282 TRP A 287 -1 N LEU A 283 O TYR A 299 SHEET 3 AA4 4 GLY A 265 MET A 269 -1 N GLU A 268 O ARG A 285 SHEET 4 AA4 4 LEU A 315 ILE A 316 -1 O ILE A 316 N GLY A 265 CISPEP 1 TYR A 92 PRO A 93 0 -1.71 CISPEP 2 PHE A 113 PRO A 114 0 4.91 CRYST1 99.190 99.190 134.620 90.00 90.00 120.00 P 63 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010082 0.005821 0.000000 0.00000 SCALE2 0.000000 0.011641 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007428 0.00000