HEADER TOXIN 09-AUG-19 6TYO TITLE SALMONELLA TYPHI PLTB HOMOPENTAMER WITH NEU-5NAC-4OAC-ALPHA-2-3-GAL- TITLE 2 BETA-1-4-GLCNAC GLYCANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERTUSSIS-LIKE TOXIN SUBUNIT; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 SYNONYM: SUBTILASE CYTOTOXIN SUBUNIT B, PLTB; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SALMONELLA TYPHI; SOURCE 3 ORGANISM_TAXID: 90370; SOURCE 4 GENE: STY1891, T1107, ABP05_22510, AXU46_23480, E2E79_23180, SOURCE 5 E2E83_22990, E2F00_23020, E2F08_23180, E2F09_23155, E2F13_22745, SOURCE 6 PLTB; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PLTB, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR T.NGUYEN,S.K.MILANO,Y.A.YANG,J.SONG REVDAT 5 16-OCT-24 6TYO 1 REMARK REVDAT 4 11-OCT-23 6TYO 1 HETSYN REVDAT 3 29-JUL-20 6TYO 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 04-MAR-20 6TYO 1 JRNL REVDAT 1 12-FEB-20 6TYO 0 JRNL AUTH T.NGUYEN,S.LEE,Y.A.YANG,C.AHN,J.H.SIM,T.G.KEI,K.N.BARNARD, JRNL AUTH 2 H.YU,S.K.MILLANO,X.CHEN,C.R.PARRISH,J.SONG JRNL TITL THE ROLE OF 9-O-ACETYLATED GLYCAN RECEPTOR MOIETIES IN THE JRNL TITL 2 TYPHOID TOXIN BINDING AND INTOXICATION. JRNL REF PLOS PATHOG. V. 16 08336 2020 JRNL REFN ESSN 1553-7374 JRNL PMID 32084237 JRNL DOI 10.1371/JOURNAL.PPAT.1008336 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.16_3549: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 45598 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4800 REMARK 3 ANGLE : 1.076 6575 REMARK 3 CHIRALITY : 0.060 770 REMARK 3 PLANARITY : 0.005 805 REMARK 3 DIHEDRAL : 11.139 2665 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TYO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45598 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 37.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.14800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4RHR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 26% PEG 1500 0.1M SODIUM ACETATE PH REMARK 280 4.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.29000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.30100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.10400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.30100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.29000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.10400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN B 75 OH TYR B 110 1.96 REMARK 500 O HOH A 384 O HOH A 391 2.09 REMARK 500 OE1 GLN C 75 OH TYR C 110 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 280 O HOH C 354 3755 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 76 160.67 78.62 REMARK 500 PHE A 117 -100.98 -115.92 REMARK 500 THR B 49 -0.29 74.22 REMARK 500 SER B 76 165.75 76.75 REMARK 500 TYR B 110 109.16 -51.08 REMARK 500 PHE B 117 -103.89 -122.25 REMARK 500 SER B 129 -169.36 -101.85 REMARK 500 THR C 49 -4.23 77.47 REMARK 500 SER C 76 165.95 80.10 REMARK 500 TYR C 110 108.87 -50.49 REMARK 500 PHE C 117 -100.09 -118.43 REMARK 500 ALA C 130 47.90 32.97 REMARK 500 THR C 131 -76.18 -163.98 REMARK 500 SER D 76 164.45 74.49 REMARK 500 PHE D 117 -100.48 -115.11 REMARK 500 THR E 49 -1.58 71.62 REMARK 500 SER E 76 161.13 80.90 REMARK 500 PHE E 117 -99.94 -116.67 REMARK 500 REMARK 500 REMARK: NULL DBREF 6TYO A 24 137 UNP Q8Z6A3 Q8Z6A3_SALTI 24 137 DBREF 6TYO B 24 137 UNP Q8Z6A3 Q8Z6A3_SALTI 24 137 DBREF 6TYO C 24 137 UNP Q8Z6A3 Q8Z6A3_SALTI 24 137 DBREF 6TYO D 24 137 UNP Q8Z6A3 Q8Z6A3_SALTI 24 137 DBREF 6TYO E 24 137 UNP Q8Z6A3 Q8Z6A3_SALTI 24 137 SEQRES 1 A 114 GLU TRP THR GLY ASP ASN THR ASN ALA TYR TYR SER ASP SEQRES 2 A 114 GLU VAL ILE SER GLU LEU HIS VAL GLY GLN ILE ASP THR SEQRES 3 A 114 SER PRO TYR PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SEQRES 4 A 114 SER GLY THR PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SEQRES 5 A 114 SER ILE TRP ALA PRO SER PHE LYS GLU LEU LEU ASP GLN SEQRES 6 A 114 ALA ARG TYR PHE TYR SER THR GLY GLN SER VAL ARG ILE SEQRES 7 A 114 HIS VAL GLN LYS ASN ILE TRP THR TYR PRO LEU PHE VAL SEQRES 8 A 114 ASN THR PHE SER ALA ASN ALA LEU VAL GLY LEU SER SER SEQRES 9 A 114 CYS SER ALA THR GLN CYS PHE GLY PRO LYS SEQRES 1 B 114 GLU TRP THR GLY ASP ASN THR ASN ALA TYR TYR SER ASP SEQRES 2 B 114 GLU VAL ILE SER GLU LEU HIS VAL GLY GLN ILE ASP THR SEQRES 3 B 114 SER PRO TYR PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SEQRES 4 B 114 SER GLY THR PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SEQRES 5 B 114 SER ILE TRP ALA PRO SER PHE LYS GLU LEU LEU ASP GLN SEQRES 6 B 114 ALA ARG TYR PHE TYR SER THR GLY GLN SER VAL ARG ILE SEQRES 7 B 114 HIS VAL GLN LYS ASN ILE TRP THR TYR PRO LEU PHE VAL SEQRES 8 B 114 ASN THR PHE SER ALA ASN ALA LEU VAL GLY LEU SER SER SEQRES 9 B 114 CYS SER ALA THR GLN CYS PHE GLY PRO LYS SEQRES 1 C 114 GLU TRP THR GLY ASP ASN THR ASN ALA TYR TYR SER ASP SEQRES 2 C 114 GLU VAL ILE SER GLU LEU HIS VAL GLY GLN ILE ASP THR SEQRES 3 C 114 SER PRO TYR PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SEQRES 4 C 114 SER GLY THR PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SEQRES 5 C 114 SER ILE TRP ALA PRO SER PHE LYS GLU LEU LEU ASP GLN SEQRES 6 C 114 ALA ARG TYR PHE TYR SER THR GLY GLN SER VAL ARG ILE SEQRES 7 C 114 HIS VAL GLN LYS ASN ILE TRP THR TYR PRO LEU PHE VAL SEQRES 8 C 114 ASN THR PHE SER ALA ASN ALA LEU VAL GLY LEU SER SER SEQRES 9 C 114 CYS SER ALA THR GLN CYS PHE GLY PRO LYS SEQRES 1 D 114 GLU TRP THR GLY ASP ASN THR ASN ALA TYR TYR SER ASP SEQRES 2 D 114 GLU VAL ILE SER GLU LEU HIS VAL GLY GLN ILE ASP THR SEQRES 3 D 114 SER PRO TYR PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SEQRES 4 D 114 SER GLY THR PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SEQRES 5 D 114 SER ILE TRP ALA PRO SER PHE LYS GLU LEU LEU ASP GLN SEQRES 6 D 114 ALA ARG TYR PHE TYR SER THR GLY GLN SER VAL ARG ILE SEQRES 7 D 114 HIS VAL GLN LYS ASN ILE TRP THR TYR PRO LEU PHE VAL SEQRES 8 D 114 ASN THR PHE SER ALA ASN ALA LEU VAL GLY LEU SER SER SEQRES 9 D 114 CYS SER ALA THR GLN CYS PHE GLY PRO LYS SEQRES 1 E 114 GLU TRP THR GLY ASP ASN THR ASN ALA TYR TYR SER ASP SEQRES 2 E 114 GLU VAL ILE SER GLU LEU HIS VAL GLY GLN ILE ASP THR SEQRES 3 E 114 SER PRO TYR PHE CYS ILE LYS THR VAL LYS ALA ASN GLY SEQRES 4 E 114 SER GLY THR PRO VAL VAL ALA CYS ALA VAL SER LYS GLN SEQRES 5 E 114 SER ILE TRP ALA PRO SER PHE LYS GLU LEU LEU ASP GLN SEQRES 6 E 114 ALA ARG TYR PHE TYR SER THR GLY GLN SER VAL ARG ILE SEQRES 7 E 114 HIS VAL GLN LYS ASN ILE TRP THR TYR PRO LEU PHE VAL SEQRES 8 E 114 ASN THR PHE SER ALA ASN ALA LEU VAL GLY LEU SER SER SEQRES 9 E 114 CYS SER ALA THR GLN CYS PHE GLY PRO LYS HET NAG F 1 29 HET GAL F 2 21 HET PKM F 3 42 HET NAG G 1 29 HET GAL G 2 21 HET PKM G 3 42 HET NAG H 1 29 HET GAL H 2 21 HET PKM H 3 42 HET NAG I 1 29 HET GAL I 2 21 HET PKM I 3 42 HET NAG J 1 29 HET GAL J 2 21 HET PKM J 3 42 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM PKM 4-O-ACETYL-5-ACETAMIDO-3,5-DIDEOXY-D-GLYCERO-ALPHA-D- HETNAM 2 PKM GALACTO-NON-2-ULOPYRANOSONIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN PKM 4-O-ACETYL-5-(ACETYLAMINO)-3,5-DIDEOXY-D-GLYCERO-ALPHA- HETSYN 2 PKM D-GALACTO-NON-2-ULOPYRANOSONIC ACID; 4-O-ACETYL-5- HETSYN 3 PKM ACETAMIDO-3,5-DIDEOXY-D-GLYCERO-ALPHA-D-GALACTO-NON-2- HETSYN 4 PKM ULOSONIC ACID; 4-O-ACETYL-5-ACETAMIDO-3,5-DIDEOXY-D- HETSYN 5 PKM GLYCERO-D-GALACTO-NON-2-ULOSONIC ACID; 4-O-ACETYL-5- HETSYN 6 PKM ACETAMIDO-3,5-DIDEOXY-D-GLYCERO-GALACTO-NON-2-ULOSONIC HETSYN 7 PKM ACID FORMUL 6 NAG 5(C8 H15 N O6) FORMUL 6 GAL 5(C6 H12 O6) FORMUL 6 PKM 5(C13 H21 N O10) FORMUL 11 HOH *398(H2 O) HELIX 1 AA1 TRP A 78 PRO A 80 5 3 HELIX 2 AA2 SER A 81 GLY A 96 1 16 HELIX 3 AA3 TYR A 110 PHE A 117 1 8 HELIX 4 AA4 TRP B 78 PRO B 80 5 3 HELIX 5 AA5 SER B 81 GLY B 96 1 16 HELIX 6 AA6 TYR B 110 PHE B 117 1 8 HELIX 7 AA7 TRP C 78 PRO C 80 5 3 HELIX 8 AA8 SER C 81 GLY C 96 1 16 HELIX 9 AA9 TYR C 110 PHE C 117 1 8 HELIX 10 AB1 TRP D 78 PRO D 80 5 3 HELIX 11 AB2 SER D 81 GLY D 96 1 16 HELIX 12 AB3 TYR D 110 PHE D 117 1 8 HELIX 13 AB4 TRP E 78 PRO E 80 5 3 HELIX 14 AB5 SER E 81 GLY E 96 1 16 HELIX 15 AB6 TYR E 110 PHE E 117 1 8 SHEET 1 AA1 7 ALA A 32 ILE A 47 0 SHEET 2 AA1 7 ALA B 121 SER B 127 -1 O LEU B 125 N VAL A 44 SHEET 3 AA1 7 VAL B 67 VAL B 72 1 N CYS B 70 O LEU B 122 SHEET 4 AA1 7 SER B 50 LYS B 59 -1 N THR B 57 O VAL B 67 SHEET 5 AA1 7 ALA B 32 ILE B 47 -1 N ILE B 47 O SER B 50 SHEET 6 AA1 7 VAL B 99 GLN B 104 -1 O VAL B 99 N GLU B 37 SHEET 7 AA1 7 ALA B 121 SER B 127 -1 O SER B 126 N ARG B 100 SHEET 1 AA2 7 ALA C 32 ILE C 47 0 SHEET 2 AA2 7 ALA A 121 SER A 127 -1 N LEU A 125 O VAL C 44 SHEET 3 AA2 7 VAL A 67 VAL A 72 1 N CYS A 70 O LEU A 122 SHEET 4 AA2 7 SER A 50 LYS A 59 -1 N ILE A 55 O ALA A 69 SHEET 5 AA2 7 ALA A 32 ILE A 47 -1 N VAL A 38 O VAL A 58 SHEET 6 AA2 7 VAL A 99 GLN A 104 -1 O VAL A 99 N GLU A 37 SHEET 7 AA2 7 ALA A 121 SER A 127 -1 O SER A 126 N ARG A 100 SHEET 1 AA3 7 ALA D 32 ILE D 47 0 SHEET 2 AA3 7 ALA C 121 SER C 127 -1 N LEU C 125 O VAL D 44 SHEET 3 AA3 7 VAL C 67 VAL C 72 1 N CYS C 70 O LEU C 122 SHEET 4 AA3 7 SER C 50 LYS C 59 -1 N THR C 57 O VAL C 67 SHEET 5 AA3 7 ALA C 32 ILE C 47 -1 N SER C 40 O LYS C 56 SHEET 6 AA3 7 VAL C 99 GLN C 104 -1 O VAL C 103 N ALA C 32 SHEET 7 AA3 7 ALA C 121 SER C 127 -1 O VAL C 123 N HIS C 102 SHEET 1 AA4 7 ALA E 32 ILE E 47 0 SHEET 2 AA4 7 ALA D 121 SER D 127 -1 N SER D 127 O LEU E 42 SHEET 3 AA4 7 VAL D 67 VAL D 72 1 N CYS D 70 O LEU D 122 SHEET 4 AA4 7 SER D 50 LYS D 59 -1 N ILE D 55 O ALA D 69 SHEET 5 AA4 7 ALA D 32 ILE D 47 -1 N SER D 40 O LYS D 56 SHEET 6 AA4 7 VAL D 99 GLN D 104 -1 O VAL D 99 N GLU D 37 SHEET 7 AA4 7 ALA D 121 SER D 127 -1 O VAL D 123 N HIS D 102 SHEET 1 AA5 7 ALA E 121 SER E 127 0 SHEET 2 AA5 7 VAL E 67 VAL E 72 1 N CYS E 70 O LEU E 122 SHEET 3 AA5 7 SER E 50 LYS E 59 -1 N THR E 57 O VAL E 67 SHEET 4 AA5 7 ALA E 32 ILE E 47 -1 N VAL E 38 O VAL E 58 SHEET 5 AA5 7 VAL E 99 GLN E 104 -1 O VAL E 103 N ALA E 32 SHEET 6 AA5 7 ALA E 121 SER E 127 -1 O SER E 126 N ARG E 100 SHEET 7 AA5 7 ALA B 32 ILE B 47 -1 N VAL B 44 O LEU E 125 SSBOND 1 CYS A 54 CYS A 70 1555 1555 2.11 SSBOND 2 CYS A 128 CYS A 133 1555 1555 1.99 SSBOND 3 CYS B 54 CYS B 70 1555 1555 2.09 SSBOND 4 CYS B 128 CYS B 133 1555 1555 2.04 SSBOND 5 CYS C 54 CYS C 70 1555 1555 2.10 SSBOND 6 CYS C 128 CYS C 133 1555 1555 2.06 SSBOND 7 CYS D 54 CYS D 70 1555 1555 2.08 SSBOND 8 CYS D 128 CYS D 133 1555 1555 2.06 SSBOND 9 CYS E 54 CYS E 70 1555 1555 2.00 SSBOND 10 CYS E 128 CYS E 133 1555 1555 2.03 LINK O4 NAG F 1 C1 GAL F 2 1555 1555 1.40 LINK O3 GAL F 2 C2 PKM F 3 1555 1555 1.45 LINK O4 NAG G 1 C1 GAL G 2 1555 1555 1.40 LINK O3 GAL G 2 C2 PKM G 3 1555 1555 1.44 LINK O4 NAG H 1 C1 GAL H 2 1555 1555 1.41 LINK O3 GAL H 2 C2 PKM H 3 1555 1555 1.45 LINK O4 NAG I 1 C1 GAL I 2 1555 1555 1.40 LINK O3 GAL I 2 C2 PKM I 3 1555 1555 1.45 LINK O4 NAG J 1 C1 GAL J 2 1555 1555 1.41 LINK O3 GAL J 2 C2 PKM J 3 1555 1555 1.44 CRYST1 68.580 98.208 104.602 90.00 90.00 90.00 P 21 21 21 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014582 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010182 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009560 0.00000 CONECT 250 356 CONECT 356 250 CONECT 821 854 CONECT 854 821 CONECT 1136 1242 CONECT 1242 1136 CONECT 1707 1740 CONECT 1740 1707 CONECT 2022 2128 CONECT 2128 2022 CONECT 2593 2626 CONECT 2626 2593 CONECT 2908 3014 CONECT 3014 2908 CONECT 3479 3512 CONECT 3512 3479 CONECT 3794 3900 CONECT 3900 3794 CONECT 4365 4398 CONECT 4398 4365 CONECT 4431 4432 4440 4443 4446 CONECT 4432 4431 4433 4439 4447 CONECT 4433 4432 4434 4441 4448 CONECT 4434 4433 4435 4442 4449 CONECT 4435 4434 4436 4443 4450 CONECT 4436 4435 4444 4451 4452 CONECT 4437 4438 4439 4445 CONECT 4438 4437 4453 4454 4455 CONECT 4439 4432 4437 4456 CONECT 4440 4431 4457 CONECT 4441 4433 4458 CONECT 4442 4434 4460 CONECT 4443 4431 4435 CONECT 4444 4436 4459 CONECT 4445 4437 CONECT 4446 4431 CONECT 4447 4432 CONECT 4448 4433 CONECT 4449 4434 CONECT 4450 4435 CONECT 4451 4436 CONECT 4452 4436 CONECT 4453 4438 CONECT 4454 4438 CONECT 4455 4438 CONECT 4456 4439 CONECT 4457 4440 CONECT 4458 4441 CONECT 4459 4444 CONECT 4460 4442 4461 4469 4471 CONECT 4461 4460 4462 4466 4472 CONECT 4462 4461 4463 4467 4473 CONECT 4463 4462 4464 4468 4474 CONECT 4464 4463 4465 4469 4475 CONECT 4465 4464 4470 4476 4477 CONECT 4466 4461 4478 CONECT 4467 4462 4485 CONECT 4468 4463 4479 CONECT 4469 4460 4464 CONECT 4470 4465 4480 CONECT 4471 4460 CONECT 4472 4461 CONECT 4473 4462 CONECT 4474 4463 CONECT 4475 4464 CONECT 4476 4465 CONECT 4477 4465 CONECT 4478 4466 CONECT 4479 4468 CONECT 4480 4470 CONECT 4481 4484 4485 4499 CONECT 4482 4483 4494 4495 CONECT 4483 4482 4504 4505 4506 CONECT 4484 4481 CONECT 4485 4467 4481 4486 4500 CONECT 4486 4485 4487 4507 4508 CONECT 4487 4486 4488 4489 4509 CONECT 4488 4487 4496 CONECT 4489 4487 4490 4495 4510 CONECT 4490 4489 4491 4500 4511 CONECT 4491 4490 4492 4501 4512 CONECT 4492 4491 4493 4502 4513 CONECT 4493 4492 4503 4514 4515 CONECT 4494 4482 CONECT 4495 4482 4489 4516 CONECT 4496 4488 4497 4498 CONECT 4497 4496 CONECT 4498 4496 4517 4518 4519 CONECT 4499 4481 CONECT 4500 4485 4490 CONECT 4501 4491 4520 CONECT 4502 4492 4521 CONECT 4503 4493 4522 CONECT 4504 4483 CONECT 4505 4483 CONECT 4506 4483 CONECT 4507 4486 CONECT 4508 4486 CONECT 4509 4487 CONECT 4510 4489 CONECT 4511 4490 CONECT 4512 4491 CONECT 4513 4492 CONECT 4514 4493 CONECT 4515 4493 CONECT 4516 4495 CONECT 4517 4498 CONECT 4518 4498 CONECT 4519 4498 CONECT 4520 4501 CONECT 4521 4502 CONECT 4522 4503 CONECT 4523 4524 4532 4535 4538 CONECT 4524 4523 4525 4531 4539 CONECT 4525 4524 4526 4533 4540 CONECT 4526 4525 4527 4534 4541 CONECT 4527 4526 4528 4535 4542 CONECT 4528 4527 4536 4543 4544 CONECT 4529 4530 4531 4537 CONECT 4530 4529 4545 4546 4547 CONECT 4531 4524 4529 4548 CONECT 4532 4523 4549 CONECT 4533 4525 4550 CONECT 4534 4526 4552 CONECT 4535 4523 4527 CONECT 4536 4528 4551 CONECT 4537 4529 CONECT 4538 4523 CONECT 4539 4524 CONECT 4540 4525 CONECT 4541 4526 CONECT 4542 4527 CONECT 4543 4528 CONECT 4544 4528 CONECT 4545 4530 CONECT 4546 4530 CONECT 4547 4530 CONECT 4548 4531 CONECT 4549 4532 CONECT 4550 4533 CONECT 4551 4536 CONECT 4552 4534 4553 4561 4563 CONECT 4553 4552 4554 4558 4564 CONECT 4554 4553 4555 4559 4565 CONECT 4555 4554 4556 4560 4566 CONECT 4556 4555 4557 4561 4567 CONECT 4557 4556 4562 4568 4569 CONECT 4558 4553 4570 CONECT 4559 4554 4577 CONECT 4560 4555 4571 CONECT 4561 4552 4556 CONECT 4562 4557 4572 CONECT 4563 4552 CONECT 4564 4553 CONECT 4565 4554 CONECT 4566 4555 CONECT 4567 4556 CONECT 4568 4557 CONECT 4569 4557 CONECT 4570 4558 CONECT 4571 4560 CONECT 4572 4562 CONECT 4573 4576 4577 4591 CONECT 4574 4575 4586 4587 CONECT 4575 4574 4596 4597 4598 CONECT 4576 4573 CONECT 4577 4559 4573 4578 4592 CONECT 4578 4577 4579 4599 4600 CONECT 4579 4578 4580 4581 4601 CONECT 4580 4579 4588 CONECT 4581 4579 4582 4587 4602 CONECT 4582 4581 4583 4592 4603 CONECT 4583 4582 4584 4593 4604 CONECT 4584 4583 4585 4594 4605 CONECT 4585 4584 4595 4606 4607 CONECT 4586 4574 CONECT 4587 4574 4581 4608 CONECT 4588 4580 4589 4590 CONECT 4589 4588 CONECT 4590 4588 4609 4610 4611 CONECT 4591 4573 CONECT 4592 4577 4582 CONECT 4593 4583 4612 CONECT 4594 4584 4613 CONECT 4595 4585 4614 CONECT 4596 4575 CONECT 4597 4575 CONECT 4598 4575 CONECT 4599 4578 CONECT 4600 4578 CONECT 4601 4579 CONECT 4602 4581 CONECT 4603 4582 CONECT 4604 4583 CONECT 4605 4584 CONECT 4606 4585 CONECT 4607 4585 CONECT 4608 4587 CONECT 4609 4590 CONECT 4610 4590 CONECT 4611 4590 CONECT 4612 4593 CONECT 4613 4594 CONECT 4614 4595 CONECT 4615 4616 4624 4627 4630 CONECT 4616 4615 4617 4623 4631 CONECT 4617 4616 4618 4625 4632 CONECT 4618 4617 4619 4626 4633 CONECT 4619 4618 4620 4627 4634 CONECT 4620 4619 4628 4635 4636 CONECT 4621 4622 4623 4629 CONECT 4622 4621 4637 4638 4639 CONECT 4623 4616 4621 4640 CONECT 4624 4615 4641 CONECT 4625 4617 4642 CONECT 4626 4618 4644 CONECT 4627 4615 4619 CONECT 4628 4620 4643 CONECT 4629 4621 CONECT 4630 4615 CONECT 4631 4616 CONECT 4632 4617 CONECT 4633 4618 CONECT 4634 4619 CONECT 4635 4620 CONECT 4636 4620 CONECT 4637 4622 CONECT 4638 4622 CONECT 4639 4622 CONECT 4640 4623 CONECT 4641 4624 CONECT 4642 4625 CONECT 4643 4628 CONECT 4644 4626 4645 4653 4655 CONECT 4645 4644 4646 4650 4656 CONECT 4646 4645 4647 4651 4657 CONECT 4647 4646 4648 4652 4658 CONECT 4648 4647 4649 4653 4659 CONECT 4649 4648 4654 4660 4661 CONECT 4650 4645 4662 CONECT 4651 4646 4669 CONECT 4652 4647 4663 CONECT 4653 4644 4648 CONECT 4654 4649 4664 CONECT 4655 4644 CONECT 4656 4645 CONECT 4657 4646 CONECT 4658 4647 CONECT 4659 4648 CONECT 4660 4649 CONECT 4661 4649 CONECT 4662 4650 CONECT 4663 4652 CONECT 4664 4654 CONECT 4665 4668 4669 4683 CONECT 4666 4667 4678 4679 CONECT 4667 4666 4688 4689 4690 CONECT 4668 4665 CONECT 4669 4651 4665 4670 4684 CONECT 4670 4669 4671 4691 4692 CONECT 4671 4670 4672 4673 4693 CONECT 4672 4671 4680 CONECT 4673 4671 4674 4679 4694 CONECT 4674 4673 4675 4684 4695 CONECT 4675 4674 4676 4685 4696 CONECT 4676 4675 4677 4686 4697 CONECT 4677 4676 4687 4698 4699 CONECT 4678 4666 CONECT 4679 4666 4673 4700 CONECT 4680 4672 4681 4682 CONECT 4681 4680 CONECT 4682 4680 4701 4702 4703 CONECT 4683 4665 CONECT 4684 4669 4674 CONECT 4685 4675 4704 CONECT 4686 4676 4705 CONECT 4687 4677 4706 CONECT 4688 4667 CONECT 4689 4667 CONECT 4690 4667 CONECT 4691 4670 CONECT 4692 4670 CONECT 4693 4671 CONECT 4694 4673 CONECT 4695 4674 CONECT 4696 4675 CONECT 4697 4676 CONECT 4698 4677 CONECT 4699 4677 CONECT 4700 4679 CONECT 4701 4682 CONECT 4702 4682 CONECT 4703 4682 CONECT 4704 4685 CONECT 4705 4686 CONECT 4706 4687 CONECT 4707 4708 4716 4719 4722 CONECT 4708 4707 4709 4715 4723 CONECT 4709 4708 4710 4717 4724 CONECT 4710 4709 4711 4718 4725 CONECT 4711 4710 4712 4719 4726 CONECT 4712 4711 4720 4727 4728 CONECT 4713 4714 4715 4721 CONECT 4714 4713 4729 4730 4731 CONECT 4715 4708 4713 4732 CONECT 4716 4707 4733 CONECT 4717 4709 4734 CONECT 4718 4710 4736 CONECT 4719 4707 4711 CONECT 4720 4712 4735 CONECT 4721 4713 CONECT 4722 4707 CONECT 4723 4708 CONECT 4724 4709 CONECT 4725 4710 CONECT 4726 4711 CONECT 4727 4712 CONECT 4728 4712 CONECT 4729 4714 CONECT 4730 4714 CONECT 4731 4714 CONECT 4732 4715 CONECT 4733 4716 CONECT 4734 4717 CONECT 4735 4720 CONECT 4736 4718 4737 4745 4747 CONECT 4737 4736 4738 4742 4748 CONECT 4738 4737 4739 4743 4749 CONECT 4739 4738 4740 4744 4750 CONECT 4740 4739 4741 4745 4751 CONECT 4741 4740 4746 4752 4753 CONECT 4742 4737 4754 CONECT 4743 4738 4761 CONECT 4744 4739 4755 CONECT 4745 4736 4740 CONECT 4746 4741 4756 CONECT 4747 4736 CONECT 4748 4737 CONECT 4749 4738 CONECT 4750 4739 CONECT 4751 4740 CONECT 4752 4741 CONECT 4753 4741 CONECT 4754 4742 CONECT 4755 4744 CONECT 4756 4746 CONECT 4757 4760 4761 4775 CONECT 4758 4759 4770 4771 CONECT 4759 4758 4780 4781 4782 CONECT 4760 4757 CONECT 4761 4743 4757 4762 4776 CONECT 4762 4761 4763 4783 4784 CONECT 4763 4762 4764 4765 4785 CONECT 4764 4763 4772 CONECT 4765 4763 4766 4771 4786 CONECT 4766 4765 4767 4776 4787 CONECT 4767 4766 4768 4777 4788 CONECT 4768 4767 4769 4778 4789 CONECT 4769 4768 4779 4790 4791 CONECT 4770 4758 CONECT 4771 4758 4765 4792 CONECT 4772 4764 4773 4774 CONECT 4773 4772 CONECT 4774 4772 4793 4794 4795 CONECT 4775 4757 CONECT 4776 4761 4766 CONECT 4777 4767 4796 CONECT 4778 4768 4797 CONECT 4779 4769 4798 CONECT 4780 4759 CONECT 4781 4759 CONECT 4782 4759 CONECT 4783 4762 CONECT 4784 4762 CONECT 4785 4763 CONECT 4786 4765 CONECT 4787 4766 CONECT 4788 4767 CONECT 4789 4768 CONECT 4790 4769 CONECT 4791 4769 CONECT 4792 4771 CONECT 4793 4774 CONECT 4794 4774 CONECT 4795 4774 CONECT 4796 4777 CONECT 4797 4778 CONECT 4798 4779 CONECT 4799 4800 4808 4811 4814 CONECT 4800 4799 4801 4807 4815 CONECT 4801 4800 4802 4809 4816 CONECT 4802 4801 4803 4810 4817 CONECT 4803 4802 4804 4811 4818 CONECT 4804 4803 4812 4819 4820 CONECT 4805 4806 4807 4813 CONECT 4806 4805 4821 4822 4823 CONECT 4807 4800 4805 4824 CONECT 4808 4799 4825 CONECT 4809 4801 4826 CONECT 4810 4802 4828 CONECT 4811 4799 4803 CONECT 4812 4804 4827 CONECT 4813 4805 CONECT 4814 4799 CONECT 4815 4800 CONECT 4816 4801 CONECT 4817 4802 CONECT 4818 4803 CONECT 4819 4804 CONECT 4820 4804 CONECT 4821 4806 CONECT 4822 4806 CONECT 4823 4806 CONECT 4824 4807 CONECT 4825 4808 CONECT 4826 4809 CONECT 4827 4812 CONECT 4828 4810 4829 4837 4839 CONECT 4829 4828 4830 4834 4840 CONECT 4830 4829 4831 4835 4841 CONECT 4831 4830 4832 4836 4842 CONECT 4832 4831 4833 4837 4843 CONECT 4833 4832 4838 4844 4845 CONECT 4834 4829 4846 CONECT 4835 4830 4853 CONECT 4836 4831 4847 CONECT 4837 4828 4832 CONECT 4838 4833 4848 CONECT 4839 4828 CONECT 4840 4829 CONECT 4841 4830 CONECT 4842 4831 CONECT 4843 4832 CONECT 4844 4833 CONECT 4845 4833 CONECT 4846 4834 CONECT 4847 4836 CONECT 4848 4838 CONECT 4849 4852 4853 4867 CONECT 4850 4851 4862 4863 CONECT 4851 4850 4872 4873 4874 CONECT 4852 4849 CONECT 4853 4835 4849 4854 4868 CONECT 4854 4853 4855 4875 4876 CONECT 4855 4854 4856 4857 4877 CONECT 4856 4855 4864 CONECT 4857 4855 4858 4863 4878 CONECT 4858 4857 4859 4868 4879 CONECT 4859 4858 4860 4869 4880 CONECT 4860 4859 4861 4870 4881 CONECT 4861 4860 4871 4882 4883 CONECT 4862 4850 CONECT 4863 4850 4857 4884 CONECT 4864 4856 4865 4866 CONECT 4865 4864 CONECT 4866 4864 4885 4886 4887 CONECT 4867 4849 CONECT 4868 4853 4858 CONECT 4869 4859 4888 CONECT 4870 4860 4889 CONECT 4871 4861 4890 CONECT 4872 4851 CONECT 4873 4851 CONECT 4874 4851 CONECT 4875 4854 CONECT 4876 4854 CONECT 4877 4855 CONECT 4878 4857 CONECT 4879 4858 CONECT 4880 4859 CONECT 4881 4860 CONECT 4882 4861 CONECT 4883 4861 CONECT 4884 4863 CONECT 4885 4866 CONECT 4886 4866 CONECT 4887 4866 CONECT 4888 4869 CONECT 4889 4870 CONECT 4890 4871 MASTER 257 0 15 15 35 0 0 6 5068 5 480 45 END