HEADER HYDROLASE 13-AUG-19 6TZZ TITLE CRYSTAL STRUCTURE OF TETRAHYMENA THERMOPHILA LIPIN PHOSPHATIDIC ACID TITLE 2 PHOSPHATASE WITH MAGNESIUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR ELONGATION AND DEFORMATION PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LIPIN PHOSPHATIDIC ACID PHOSPHATASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TETRAHYMENA THERMOPHILA; SOURCE 3 ORGANISM_TAXID: 5911; SOURCE 4 GENE: TTHERM_00215970; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: RIPL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPSUMO KEYWDS LIPIN, PHOSPHATIDIC ACID PHOSPHATASE, IMMUNOGLOBULIN-LIKE, HALOACID KEYWDS 2 DEHALOGENASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR V.I.KHAYYO,M.V.AIROLA REVDAT 2 13-MAR-24 6TZZ 1 LINK REVDAT 1 18-MAR-20 6TZZ 0 JRNL AUTH V.I.KHAYYO,R.M.HOFFMANN,H.WANG,J.A.BELL,J.E.BURKE,K.REUE, JRNL AUTH 2 M.V.AIROLA JRNL TITL CRYSTAL STRUCTURE OF A LIPIN/PAH PHOSPHATIDIC ACID JRNL TITL 2 PHOSPHATASE JRNL REF NAT COMMUN V. 11 1309 2020 JRNL REFN ESSN 2041-1723 JRNL DOI 10.1038/S41467-020-15124-Z REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.460 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 14630 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.242 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 760 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.4920 - 5.1282 1.00 2846 158 0.2540 0.2766 REMARK 3 2 5.1282 - 4.0711 1.00 2781 155 0.2020 0.2797 REMARK 3 3 4.0711 - 3.5567 1.00 2757 151 0.2413 0.2762 REMARK 3 4 3.5567 - 3.2316 1.00 2739 150 0.2515 0.3052 REMARK 3 5 3.2316 - 3.0000 1.00 2747 146 0.3027 0.3407 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 70.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 21:321 OR RESID 501:520 OR REMARK 3 RESID 401:401 ) ) OR ( CHAIN B AND ( RESID 501:509 REMARK 3 OR RESID 20:321 OR RESID 401:401 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.161 1.958 1.164 REMARK 3 T TENSOR REMARK 3 T11: 0.1509 T22: 0.1140 REMARK 3 T33: 0.4523 T12: -0.0110 REMARK 3 T13: -0.0237 T23: 0.0473 REMARK 3 L TENSOR REMARK 3 L11: 0.5824 L22: 0.0764 REMARK 3 L33: 0.3873 L12: -0.0309 REMARK 3 L13: -0.0858 L23: 0.2774 REMARK 3 S TENSOR REMARK 3 S11: 0.0122 S12: 0.0178 S13: 0.0573 REMARK 3 S21: 0.0160 S22: 0.0206 S23: -0.0369 REMARK 3 S31: -0.0751 S32: 0.1617 S33: 0.0428 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 21 THROUGH 46 OR REMARK 3 RESID 54 THROUGH 85 OR RESID 93 THROUGH REMARK 3 226 OR RESID 242 THROUGH 321)) REMARK 3 SELECTION : (CHAIN B AND (RESID 21 THROUGH 154 OR REMARK 3 RESID 168 THROUGH 321)) REMARK 3 ATOM PAIRS NUMBER : 1542 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6TZZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243646. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91839 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.6.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23065 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.580 REMARK 200 RESOLUTION RANGE LOW (A) : 47.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.25000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 1.24700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MG(NO3)2, 10% PEG 3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 82.70500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.82200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 82.70500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.82200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ILE A 2 REMARK 465 ASN A 3 REMARK 465 GLY A 4 REMARK 465 ILE A 5 REMARK 465 LYS A 6 REMARK 465 ASN A 7 REMARK 465 LEU A 8 REMARK 465 PHE A 9 REMARK 465 SER A 10 REMARK 465 TYR A 11 REMARK 465 LEU A 12 REMARK 465 PHE A 13 REMARK 465 ASP A 14 REMARK 465 SER A 15 REMARK 465 LYS A 16 REMARK 465 ASP A 17 REMARK 465 TYR A 18 REMARK 465 SER A 19 REMARK 465 THR A 20 REMARK 465 THR A 48 REMARK 465 LEU A 49 REMARK 465 LYS A 50 REMARK 465 VAL A 51 REMARK 465 LEU A 52 REMARK 465 ASP A 53 REMARK 465 ASN A 87 REMARK 465 ALA A 88 REMARK 465 LYS A 89 REMARK 465 ASN A 90 REMARK 465 GLU A 91 REMARK 465 ASP A 155 REMARK 465 VAL A 156 REMARK 465 LYS A 157 REMARK 465 GLY A 158 REMARK 465 HIS A 159 REMARK 465 ILE A 160 REMARK 465 SER A 161 REMARK 465 THR A 162 REMARK 465 ILE A 163 REMARK 465 ILE A 164 REMARK 465 GLY A 165 REMARK 465 LYS A 166 REMARK 465 GLU A 167 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ILE B 2 REMARK 465 ASN B 3 REMARK 465 GLY B 4 REMARK 465 ILE B 5 REMARK 465 LYS B 6 REMARK 465 ASN B 7 REMARK 465 LEU B 8 REMARK 465 PHE B 9 REMARK 465 SER B 10 REMARK 465 TYR B 11 REMARK 465 LEU B 12 REMARK 465 PHE B 13 REMARK 465 ASP B 14 REMARK 465 SER B 15 REMARK 465 LYS B 16 REMARK 465 ASP B 17 REMARK 465 TYR B 18 REMARK 465 SER B 19 REMARK 465 GLY B 47 REMARK 465 THR B 48 REMARK 465 LEU B 49 REMARK 465 LYS B 50 REMARK 465 VAL B 51 REMARK 465 LEU B 52 REMARK 465 ASP B 53 REMARK 465 LEU B 86 REMARK 465 ASN B 87 REMARK 465 ALA B 88 REMARK 465 LYS B 89 REMARK 465 ASN B 90 REMARK 465 GLU B 91 REMARK 465 ILE B 92 REMARK 465 ASP B 155 REMARK 465 VAL B 156 REMARK 465 LYS B 157 REMARK 465 GLY B 158 REMARK 465 HIS B 159 REMARK 465 ILE B 160 REMARK 465 SER B 161 REMARK 465 THR B 162 REMARK 465 ILE B 163 REMARK 465 ILE B 164 REMARK 465 GLY B 165 REMARK 465 LYS B 166 REMARK 465 ILE B 227 REMARK 465 ILE B 228 REMARK 465 SER B 229 REMARK 465 SER B 230 REMARK 465 LEU B 231 REMARK 465 ASN B 232 REMARK 465 ARG B 233 REMARK 465 GLU B 234 REMARK 465 VAL B 235 REMARK 465 VAL B 236 REMARK 465 TYR B 237 REMARK 465 LYS B 238 REMARK 465 LYS B 239 REMARK 465 ALA B 240 REMARK 465 ASP B 241 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 26 OH TYR A 198 2.00 REMARK 500 OD1 ASP B 26 OH TYR B 198 2.04 REMARK 500 O HOH A 519 O HOH A 520 2.14 REMARK 500 OE1 GLU B 167 OH TYR B 200 2.16 REMARK 500 OH TYR A 189 O PRO A 216 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 517 O HOH B 507 4455 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 240 -128.52 53.24 REMARK 500 SER A 293 33.66 70.91 REMARK 500 LYS A 312 41.67 -94.03 REMARK 500 SER B 293 37.57 72.77 REMARK 500 LYS B 312 36.99 -96.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 146 OD2 REMARK 620 2 ASP A 148 O 90.7 REMARK 620 3 ASN A 268 OD1 83.5 80.7 REMARK 620 4 HOH A 515 O 169.5 79.4 91.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 146 OD2 REMARK 620 2 ASP B 148 O 85.6 REMARK 620 3 ASN B 268 OD1 63.1 66.3 REMARK 620 4 HOH B 509 O 149.5 119.9 139.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6TZY RELATED DB: PDB REMARK 900 SAME PROTEIN WITH CALCIUM BOUND COFACTOR IN ACTIVE SITE DBREF 6TZZ A 1 321 UNP I7MFJ3 I7MFJ3_TETTS 1 321 DBREF 6TZZ B 1 321 UNP I7MFJ3 I7MFJ3_TETTS 1 321 SEQADV 6TZZ SER A 0 UNP I7MFJ3 EXPRESSION TAG SEQADV 6TZZ SER B 0 UNP I7MFJ3 EXPRESSION TAG SEQRES 1 A 322 SER MET ILE ASN GLY ILE LYS ASN LEU PHE SER TYR LEU SEQRES 2 A 322 PHE ASP SER LYS ASP TYR SER THR PHE SER GLY VAL VAL SEQRES 3 A 322 ASP ILE ILE VAL VAL ARG GLN PRO ASP ASP SER LEU LYS SEQRES 4 A 322 SER MET PRO PHE HIS ILE ARG PHE GLY THR LEU LYS VAL SEQRES 5 A 322 LEU ASP ASN GLN ASN ILE ASN ILE GLN ILE THR VAL ASN SEQRES 6 A 322 ASP LYS LYS ILE GLU ASP VAL PHE MET LEU MET LEU PRO SEQRES 7 A 322 GLU GLY ALA CYS TYR PHE PRO GLU LEU ASN ALA LYS ASN SEQRES 8 A 322 GLU ILE GLN LYS LYS LEU ARG PRO SER SER ALA ILE LEU SEQRES 9 A 322 LYS LYS PHE ASN LEU LYS ASN GLY TYR ASN LYS ILE GLN SEQRES 10 A 322 PHE ILE ALA GLU SER ASP LEU GLN GLY LYS GLN LEU ILE SEQRES 11 A 322 GLU GLY LYS ILE TYR LEU TYR ASN TYR ASP THR LYS LEU SEQRES 12 A 322 VAL ILE SER ASP VAL ASP GLY THR VAL THR LYS SER ASP SEQRES 13 A 322 VAL LYS GLY HIS ILE SER THR ILE ILE GLY LYS GLU TRP SEQRES 14 A 322 THR HIS ASP ASP ILE ALA GLU LEU TYR THR ASN ILE GLN SEQRES 15 A 322 LYS ASN GLY TYR LYS MET VAL TYR LEU SER SER ARG PRO SEQRES 16 A 322 LEU TYR PHE TYR ASN TYR THR GLN GLY TYR LEU LYS GLY SEQRES 17 A 322 ILE ILE GLN ASN GLY PHE THR MET PRO ASP GLY PRO ILE SEQRES 18 A 322 LEU LEU SER PRO ASP GLN ILE ILE SER SER LEU ASN ARG SEQRES 19 A 322 GLU VAL VAL TYR LYS LYS ALA ASP GLU PHE LYS GLY ALA SEQRES 20 A 322 LEU LEU LYS ASP LEU ARG ARG VAL PHE PRO GLU GLU VAL SEQRES 21 A 322 ASN PRO ILE PHE ALA GLY PHE GLY ASN ARG ASP THR ASP SEQRES 22 A 322 ALA THR ALA CYS LEU TYR ALA GLY VAL ILE ILE ASP ASN SEQRES 23 A 322 ILE PHE ILE ILE ASN GLU GLN SER GLN VAL GLU ILE LEU SEQRES 24 A 322 GLY LYS GLN GLU LYS SER SER TYR LYS LYS ILE ASN GLU SEQRES 25 A 322 LYS ILE GLN GLU LEU PHE PRO ARG LEU PRO SEQRES 1 B 322 SER MET ILE ASN GLY ILE LYS ASN LEU PHE SER TYR LEU SEQRES 2 B 322 PHE ASP SER LYS ASP TYR SER THR PHE SER GLY VAL VAL SEQRES 3 B 322 ASP ILE ILE VAL VAL ARG GLN PRO ASP ASP SER LEU LYS SEQRES 4 B 322 SER MET PRO PHE HIS ILE ARG PHE GLY THR LEU LYS VAL SEQRES 5 B 322 LEU ASP ASN GLN ASN ILE ASN ILE GLN ILE THR VAL ASN SEQRES 6 B 322 ASP LYS LYS ILE GLU ASP VAL PHE MET LEU MET LEU PRO SEQRES 7 B 322 GLU GLY ALA CYS TYR PHE PRO GLU LEU ASN ALA LYS ASN SEQRES 8 B 322 GLU ILE GLN LYS LYS LEU ARG PRO SER SER ALA ILE LEU SEQRES 9 B 322 LYS LYS PHE ASN LEU LYS ASN GLY TYR ASN LYS ILE GLN SEQRES 10 B 322 PHE ILE ALA GLU SER ASP LEU GLN GLY LYS GLN LEU ILE SEQRES 11 B 322 GLU GLY LYS ILE TYR LEU TYR ASN TYR ASP THR LYS LEU SEQRES 12 B 322 VAL ILE SER ASP VAL ASP GLY THR VAL THR LYS SER ASP SEQRES 13 B 322 VAL LYS GLY HIS ILE SER THR ILE ILE GLY LYS GLU TRP SEQRES 14 B 322 THR HIS ASP ASP ILE ALA GLU LEU TYR THR ASN ILE GLN SEQRES 15 B 322 LYS ASN GLY TYR LYS MET VAL TYR LEU SER SER ARG PRO SEQRES 16 B 322 LEU TYR PHE TYR ASN TYR THR GLN GLY TYR LEU LYS GLY SEQRES 17 B 322 ILE ILE GLN ASN GLY PHE THR MET PRO ASP GLY PRO ILE SEQRES 18 B 322 LEU LEU SER PRO ASP GLN ILE ILE SER SER LEU ASN ARG SEQRES 19 B 322 GLU VAL VAL TYR LYS LYS ALA ASP GLU PHE LYS GLY ALA SEQRES 20 B 322 LEU LEU LYS ASP LEU ARG ARG VAL PHE PRO GLU GLU VAL SEQRES 21 B 322 ASN PRO ILE PHE ALA GLY PHE GLY ASN ARG ASP THR ASP SEQRES 22 B 322 ALA THR ALA CYS LEU TYR ALA GLY VAL ILE ILE ASP ASN SEQRES 23 B 322 ILE PHE ILE ILE ASN GLU GLN SER GLN VAL GLU ILE LEU SEQRES 24 B 322 GLY LYS GLN GLU LYS SER SER TYR LYS LYS ILE ASN GLU SEQRES 25 B 322 LYS ILE GLN GLU LEU PHE PRO ARG LEU PRO HET MG A 401 1 HET MG B 401 1 HETNAM MG MAGNESIUM ION FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *29(H2 O) HELIX 1 AA1 SER A 99 PHE A 106 1 8 HELIX 2 AA2 ASP A 172 ASN A 183 1 12 HELIX 3 AA3 PRO A 194 TYR A 196 5 3 HELIX 4 AA4 PHE A 197 ILE A 208 1 12 HELIX 5 AA5 GLU A 234 LYS A 239 1 6 HELIX 6 AA6 GLU A 242 ARG A 253 1 12 HELIX 7 AA7 ARG A 269 ALA A 279 1 11 HELIX 8 AA8 ILE A 282 ASP A 284 5 3 HELIX 9 AA9 SER A 305 LYS A 312 1 8 HELIX 10 AB1 LYS A 312 PHE A 317 1 6 HELIX 11 AB2 SER B 99 PHE B 106 1 8 HELIX 12 AB3 ASP B 172 ASN B 183 1 12 HELIX 13 AB4 PRO B 194 TYR B 196 5 3 HELIX 14 AB5 PHE B 197 GLY B 207 1 11 HELIX 15 AB6 PHE B 243 VAL B 254 1 12 HELIX 16 AB7 ARG B 269 ALA B 279 1 11 HELIX 17 AB8 ILE B 282 ASP B 284 5 3 HELIX 18 AB9 SER B 305 LYS B 312 1 8 HELIX 19 AC1 LYS B 312 PHE B 317 1 6 SHEET 1 AA1 2 GLY A 23 VAL A 24 0 SHEET 2 AA1 2 ILE A 44 ARG A 45 -1 O ARG A 45 N GLY A 23 SHEET 1 AA2 8 LEU A 37 SER A 39 0 SHEET 2 AA2 8 ILE A 27 ARG A 31 -1 N VAL A 30 O LYS A 38 SHEET 3 AA2 8 GLY A 125 ASN A 137 1 O TYR A 134 N VAL A 29 SHEET 4 AA2 8 GLY A 111 SER A 121 -1 N ALA A 119 O GLN A 127 SHEET 5 AA2 8 ASN A 58 VAL A 63 -1 N THR A 62 O GLN A 116 SHEET 6 AA2 8 LYS A 66 MET A 75 -1 O LYS A 66 N VAL A 63 SHEET 7 AA2 8 CYS A 81 GLU A 85 -1 O TYR A 82 N LEU A 74 SHEET 8 AA2 8 GLN A 93 LYS A 95 -1 O GLN A 93 N GLU A 85 SHEET 1 AA3 7 ILE A 220 LEU A 222 0 SHEET 2 AA3 7 LYS A 186 SER A 191 1 N SER A 191 O LEU A 221 SHEET 3 AA3 7 LEU A 142 ASP A 146 1 N VAL A 143 O VAL A 188 SHEET 4 AA3 7 ILE A 262 GLY A 267 1 O ALA A 264 N ILE A 144 SHEET 5 AA3 7 ILE A 286 ILE A 289 1 O PHE A 287 N GLY A 267 SHEET 6 AA3 7 VAL A 295 ILE A 297 -1 O GLU A 296 N ILE A 288 SHEET 7 AA3 7 GLU A 302 SER A 304 -1 O SER A 304 N VAL A 295 SHEET 1 AA4 2 GLY B 23 VAL B 24 0 SHEET 2 AA4 2 ILE B 44 ARG B 45 -1 O ARG B 45 N GLY B 23 SHEET 1 AA5 7 LEU B 37 SER B 39 0 SHEET 2 AA5 7 ILE B 27 ARG B 31 -1 N VAL B 30 O LYS B 38 SHEET 3 AA5 7 GLY B 125 ASN B 137 1 O TYR B 136 N ARG B 31 SHEET 4 AA5 7 GLY B 111 SER B 121 -1 N ALA B 119 O GLN B 127 SHEET 5 AA5 7 ASN B 58 VAL B 63 -1 N ASN B 58 O GLU B 120 SHEET 6 AA5 7 LYS B 66 MET B 75 -1 O LYS B 66 N VAL B 63 SHEET 7 AA5 7 CYS B 81 TYR B 82 -1 O TYR B 82 N LEU B 74 SHEET 1 AA6 7 ILE B 220 LEU B 222 0 SHEET 2 AA6 7 LYS B 186 SER B 191 1 N TYR B 189 O LEU B 221 SHEET 3 AA6 7 LEU B 142 ASP B 146 1 N VAL B 143 O LYS B 186 SHEET 4 AA6 7 ILE B 262 GLY B 267 1 O PHE B 263 N LEU B 142 SHEET 5 AA6 7 ILE B 286 ILE B 289 1 O PHE B 287 N GLY B 267 SHEET 6 AA6 7 VAL B 295 ILE B 297 -1 O GLU B 296 N ILE B 288 SHEET 7 AA6 7 GLU B 302 SER B 304 -1 O SER B 304 N VAL B 295 SHEET 1 AA7 2 ILE B 209 GLN B 210 0 SHEET 2 AA7 2 PHE B 213 THR B 214 -1 O PHE B 213 N GLN B 210 LINK OD2 ASP A 146 MG MG A 401 1555 1555 1.92 LINK O ASP A 148 MG MG A 401 1555 1555 2.13 LINK OD1 ASN A 268 MG MG A 401 1555 1555 2.00 LINK MG MG A 401 O HOH A 515 1555 1555 2.64 LINK OD2 ASP B 146 MG MG B 401 1555 1555 2.21 LINK O ASP B 148 MG MG B 401 1555 1555 2.10 LINK OD1 ASN B 268 MG MG B 401 1555 1555 2.93 LINK MG MG B 401 O HOH B 509 1555 1555 2.35 SITE 1 AC1 4 ASP A 146 ASP A 148 ASN A 268 HOH A 515 SITE 1 AC2 4 ASP B 146 ASP B 148 ASN B 268 HOH B 509 CRYST1 165.410 57.644 84.191 90.00 114.90 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006046 0.000000 0.002806 0.00000 SCALE2 0.000000 0.017348 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013095 0.00000