HEADER TRANSLATION/INHIBITOR 13-AUG-19 6U09 TITLE DISCOVERY OF LYSINE-TARGETED EIF4E INHIBITORS THROUGH COVALENT DOCKING COMPND MOL_ID: 1; COMPND 2 MOLECULE: EUKARYOTIC TRANSLATION INITIATION FACTOR 4E; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: MRNA CAP-BINDING PROTEIN,EIF-4F 25 KDA SUBUNIT; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: COVALENT LYSINE INHIBITOR SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: EIF4E; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CAP-BINDING SITE, ANTI-NEOPLASTIC, INHIBITOR, TRANSLATION INITIATION KEYWDS 2 BLOCKING, TRANSLATION-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR X.B.WAN,B.K.SHOICHET,J.TAUNTON REVDAT 4 11-OCT-23 6U09 1 REMARK REVDAT 3 08-APR-20 6U09 1 JRNL REVDAT 2 18-DEC-19 6U09 1 REMARK REVDAT 1 23-OCT-19 6U09 0 JRNL AUTH X.WAN,T.YANG,A.CUESTA,X.PANG,T.E.BALIUS,J.J.IRWIN, JRNL AUTH 2 B.K.SHOICHET,J.TAUNTON JRNL TITL DISCOVERY OF LYSINE-TARGETED EIF4E INHIBITORS THROUGH JRNL TITL 2 COVALENT DOCKING. JRNL REF J.AM.CHEM.SOC. V. 142 4960 2020 JRNL REFN ESSN 1520-5126 JRNL PMID 32105459 JRNL DOI 10.1021/JACS.9B10377 REMARK 2 REMARK 2 RESOLUTION. 1.79 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX PHENIX-1.13-2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.79 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 73.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 71772 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 3466 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 73.5250 - 5.2335 0.97 2839 149 0.1812 0.2271 REMARK 3 2 5.2335 - 4.1541 0.96 2773 141 0.1592 0.1940 REMARK 3 3 4.1541 - 3.6290 0.96 2805 156 0.1592 0.2121 REMARK 3 4 3.6290 - 3.2972 0.95 2774 128 0.1734 0.2097 REMARK 3 5 3.2972 - 3.0608 0.95 2790 137 0.1807 0.2286 REMARK 3 6 3.0608 - 2.8804 0.95 2758 118 0.1828 0.2509 REMARK 3 7 2.8804 - 2.7361 0.95 2772 117 0.1954 0.2488 REMARK 3 8 2.7361 - 2.6170 0.95 2788 165 0.1895 0.2483 REMARK 3 9 2.6170 - 2.5163 0.95 2721 139 0.1948 0.2775 REMARK 3 10 2.5163 - 2.4294 0.94 2730 172 0.1982 0.2577 REMARK 3 11 2.4294 - 2.3535 0.95 2748 152 0.1925 0.2365 REMARK 3 12 2.3535 - 2.2862 0.94 2697 145 0.1945 0.2442 REMARK 3 13 2.2862 - 2.2260 0.94 2740 131 0.1978 0.2302 REMARK 3 14 2.2260 - 2.1717 0.94 2778 130 0.2100 0.2620 REMARK 3 15 2.1717 - 2.1223 0.93 2637 149 0.2091 0.2570 REMARK 3 16 2.1223 - 2.0771 0.94 2854 110 0.2160 0.2514 REMARK 3 17 2.0771 - 2.0356 0.92 2691 114 0.2170 0.2531 REMARK 3 18 2.0356 - 1.9972 0.93 2623 161 0.2307 0.3073 REMARK 3 19 1.9972 - 1.9615 0.93 2769 151 0.2407 0.2563 REMARK 3 20 1.9615 - 1.9282 0.92 2625 143 0.2561 0.3027 REMARK 3 21 1.9282 - 1.8971 0.92 2651 140 0.2758 0.2826 REMARK 3 22 1.8971 - 1.8680 0.92 2760 131 0.2784 0.3316 REMARK 3 23 1.8680 - 1.8405 0.91 2619 144 0.3036 0.3419 REMARK 3 24 1.8405 - 1.8146 0.91 2625 112 0.3149 0.3592 REMARK 3 25 1.8146 - 1.7900 0.91 2739 131 0.3269 0.3870 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 31 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 30 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5491 -11.8262 7.3469 REMARK 3 T TENSOR REMARK 3 T11: 0.3227 T22: 0.3752 REMARK 3 T33: 0.4187 T12: 0.0873 REMARK 3 T13: -0.0171 T23: -0.1061 REMARK 3 L TENSOR REMARK 3 L11: 5.0671 L22: 5.3586 REMARK 3 L33: 2.8957 L12: 0.6992 REMARK 3 L13: -2.8952 L23: 0.3364 REMARK 3 S TENSOR REMARK 3 S11: -0.1680 S12: 0.1108 S13: -0.3446 REMARK 3 S21: -0.3574 S22: 0.2635 S23: -0.6712 REMARK 3 S31: 0.0737 S32: 0.7708 S33: -0.1053 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.8139 -2.8930 15.0390 REMARK 3 T TENSOR REMARK 3 T11: 0.2571 T22: 0.3276 REMARK 3 T33: 0.4325 T12: -0.0021 REMARK 3 T13: -0.0121 T23: -0.0628 REMARK 3 L TENSOR REMARK 3 L11: 9.9529 L22: 0.6136 REMARK 3 L33: 0.6321 L12: -1.3575 REMARK 3 L13: -1.3020 L23: 0.4143 REMARK 3 S TENSOR REMARK 3 S11: -0.0795 S12: 0.3886 S13: -0.2459 REMARK 3 S21: -0.0264 S22: -0.1280 S23: 0.3818 REMARK 3 S31: 0.0518 S32: -0.4415 S33: 0.1726 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 57 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1537 -6.9852 12.0786 REMARK 3 T TENSOR REMARK 3 T11: 0.2618 T22: 0.2528 REMARK 3 T33: 0.5462 T12: -0.0410 REMARK 3 T13: -0.0337 T23: -0.1360 REMARK 3 L TENSOR REMARK 3 L11: 7.7010 L22: 0.0681 REMARK 3 L33: 2.6172 L12: -0.4524 REMARK 3 L13: -4.2771 L23: 0.1966 REMARK 3 S TENSOR REMARK 3 S11: 0.0724 S12: 0.5102 S13: 0.1124 REMARK 3 S21: 0.0256 S22: -0.2437 S23: 0.5583 REMARK 3 S31: -0.2958 S32: -0.6703 S33: 0.2336 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.6493 0.4793 10.4727 REMARK 3 T TENSOR REMARK 3 T11: 0.2002 T22: 0.1627 REMARK 3 T33: 0.2468 T12: -0.0199 REMARK 3 T13: -0.0305 T23: -0.0247 REMARK 3 L TENSOR REMARK 3 L11: 2.7375 L22: 2.7050 REMARK 3 L33: 3.1442 L12: -0.6995 REMARK 3 L13: -0.9348 L23: 0.3024 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: 0.1708 S13: -0.1545 REMARK 3 S21: -0.1525 S22: -0.0173 S23: 0.2620 REMARK 3 S31: -0.1462 S32: -0.1752 S33: 0.0266 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6443 -10.9147 25.8141 REMARK 3 T TENSOR REMARK 3 T11: 0.3824 T22: 0.2466 REMARK 3 T33: 0.3031 T12: 0.0144 REMARK 3 T13: 0.0766 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: 6.7869 L22: 3.5575 REMARK 3 L33: 2.2640 L12: 0.6974 REMARK 3 L13: -2.0322 L23: 0.5678 REMARK 3 S TENSOR REMARK 3 S11: -0.0637 S12: -0.0713 S13: -0.5168 REMARK 3 S21: 0.5930 S22: 0.0111 S23: 0.2895 REMARK 3 S31: 0.5426 S32: -0.6825 S33: 0.0421 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 111 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2217 3.8412 25.5615 REMARK 3 T TENSOR REMARK 3 T11: 0.2114 T22: 0.1449 REMARK 3 T33: 0.2190 T12: -0.0033 REMARK 3 T13: -0.0102 T23: -0.0309 REMARK 3 L TENSOR REMARK 3 L11: 1.7089 L22: 2.5913 REMARK 3 L33: 3.0777 L12: -0.1894 REMARK 3 L13: -0.5032 L23: -0.0976 REMARK 3 S TENSOR REMARK 3 S11: -0.0204 S12: -0.2242 S13: 0.0618 REMARK 3 S21: 0.3278 S22: 0.0439 S23: -0.0015 REMARK 3 S31: -0.1244 S32: 0.1253 S33: -0.0073 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1775 1.0463 35.9222 REMARK 3 T TENSOR REMARK 3 T11: 0.4124 T22: 0.3081 REMARK 3 T33: 0.4049 T12: 0.0138 REMARK 3 T13: 0.1160 T23: -0.0625 REMARK 3 L TENSOR REMARK 3 L11: 0.9328 L22: 6.1739 REMARK 3 L33: 4.2433 L12: 2.3820 REMARK 3 L13: -0.0355 L23: 0.6120 REMARK 3 S TENSOR REMARK 3 S11: 0.2501 S12: -0.4991 S13: 0.8436 REMARK 3 S21: 0.8388 S22: -0.3587 S23: 1.1292 REMARK 3 S31: -0.2760 S32: -0.8220 S33: -0.0597 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.9964 4.4646 68.9868 REMARK 3 T TENSOR REMARK 3 T11: 0.2895 T22: 0.3693 REMARK 3 T33: 0.4253 T12: -0.0040 REMARK 3 T13: -0.1023 T23: 0.0422 REMARK 3 L TENSOR REMARK 3 L11: 4.6655 L22: 5.2290 REMARK 3 L33: 4.2509 L12: -0.9382 REMARK 3 L13: 1.6749 L23: -3.4389 REMARK 3 S TENSOR REMARK 3 S11: 0.4116 S12: -0.1168 S13: -0.3200 REMARK 3 S21: 0.1198 S22: -0.6095 S23: -0.4952 REMARK 3 S31: 0.7003 S32: 0.3775 S33: -0.1521 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0970 28.4005 62.5589 REMARK 3 T TENSOR REMARK 3 T11: 0.2598 T22: 0.2907 REMARK 3 T33: 0.4240 T12: 0.0051 REMARK 3 T13: -0.0627 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.3897 L22: 6.4344 REMARK 3 L33: 0.5030 L12: -2.0330 REMARK 3 L13: -0.2987 L23: -0.2036 REMARK 3 S TENSOR REMARK 3 S11: -0.0011 S12: 0.1381 S13: 0.4627 REMARK 3 S21: 0.2073 S22: -0.2131 S23: -0.2212 REMARK 3 S31: -0.3133 S32: -0.1166 S33: 0.2367 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1768 17.0557 66.2749 REMARK 3 T TENSOR REMARK 3 T11: 0.1573 T22: 0.2120 REMARK 3 T33: 0.2287 T12: -0.0009 REMARK 3 T13: -0.0314 T23: -0.0237 REMARK 3 L TENSOR REMARK 3 L11: 3.0392 L22: 2.3097 REMARK 3 L33: 3.4112 L12: -0.0139 REMARK 3 L13: 0.2975 L23: -0.7658 REMARK 3 S TENSOR REMARK 3 S11: -0.0197 S12: -0.2906 S13: 0.0316 REMARK 3 S21: 0.2151 S22: -0.0161 S23: 0.1042 REMARK 3 S31: -0.2690 S32: -0.1900 S33: 0.0472 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 96 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.8765 24.9385 50.7605 REMARK 3 T TENSOR REMARK 3 T11: 0.2602 T22: 0.2742 REMARK 3 T33: 0.3430 T12: -0.0634 REMARK 3 T13: 0.0114 T23: 0.0475 REMARK 3 L TENSOR REMARK 3 L11: 2.3384 L22: 4.4343 REMARK 3 L33: 9.2359 L12: 1.0007 REMARK 3 L13: 0.1522 L23: -0.9720 REMARK 3 S TENSOR REMARK 3 S11: -0.1596 S12: 0.1362 S13: 0.3971 REMARK 3 S21: -0.0980 S22: 0.0726 S23: -0.2308 REMARK 3 S31: -0.9928 S32: -0.0480 S33: 0.1210 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 111 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.6298 16.1690 53.5291 REMARK 3 T TENSOR REMARK 3 T11: 0.2072 T22: 0.4155 REMARK 3 T33: 0.3584 T12: -0.0405 REMARK 3 T13: -0.0332 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 2.8770 L22: 0.8052 REMARK 3 L33: 2.4874 L12: -0.1511 REMARK 3 L13: -1.7866 L23: 0.0497 REMARK 3 S TENSOR REMARK 3 S11: 0.0226 S12: 0.1665 S13: 0.3615 REMARK 3 S21: -0.1843 S22: 0.0045 S23: 0.4807 REMARK 3 S31: -0.1130 S32: -0.5353 S33: -0.0367 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 126 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1900 14.1955 53.1952 REMARK 3 T TENSOR REMARK 3 T11: 0.1421 T22: 0.2127 REMARK 3 T33: 0.2241 T12: -0.0144 REMARK 3 T13: -0.0150 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 2.0044 L22: 2.7173 REMARK 3 L33: 3.1980 L12: 0.1347 REMARK 3 L13: 0.0447 L23: -0.4079 REMARK 3 S TENSOR REMARK 3 S11: -0.0042 S12: 0.2344 S13: 0.0166 REMARK 3 S21: -0.2628 S22: -0.0616 S23: -0.0613 REMARK 3 S31: 0.1143 S32: -0.0256 S33: 0.0764 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 173 THROUGH 186 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1348 7.1030 45.1771 REMARK 3 T TENSOR REMARK 3 T11: 0.3272 T22: 0.2756 REMARK 3 T33: 0.2000 T12: -0.0161 REMARK 3 T13: -0.0268 T23: -0.0920 REMARK 3 L TENSOR REMARK 3 L11: 7.6240 L22: 4.7504 REMARK 3 L33: 5.2126 L12: 0.2778 REMARK 3 L13: -2.7950 L23: -0.4003 REMARK 3 S TENSOR REMARK 3 S11: 0.1018 S12: 0.9028 S13: -0.2673 REMARK 3 S21: -0.3838 S22: -0.0918 S23: 0.0559 REMARK 3 S31: 0.4299 S32: -0.5336 S33: 0.0917 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 187 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6522 15.6772 42.6426 REMARK 3 T TENSOR REMARK 3 T11: 0.2781 T22: 0.3824 REMARK 3 T33: 0.3029 T12: -0.0381 REMARK 3 T13: -0.0578 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 4.3332 L22: 3.2929 REMARK 3 L33: 3.6627 L12: 2.5929 REMARK 3 L13: -0.8205 L23: -0.9467 REMARK 3 S TENSOR REMARK 3 S11: -0.1906 S12: 0.6737 S13: 0.2436 REMARK 3 S21: -0.5219 S22: 0.3438 S23: 0.2647 REMARK 3 S31: 0.0998 S32: -0.1720 S33: -0.1826 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 28 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.1771 9.8796 81.1133 REMARK 3 T TENSOR REMARK 3 T11: 0.2029 T22: 0.4152 REMARK 3 T33: 0.3123 T12: 0.0645 REMARK 3 T13: -0.0419 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 3.1995 L22: 3.0754 REMARK 3 L33: 3.9747 L12: 0.2425 REMARK 3 L13: -0.2452 L23: -0.0745 REMARK 3 S TENSOR REMARK 3 S11: 0.3160 S12: -0.6775 S13: -0.3492 REMARK 3 S21: 0.2408 S22: -0.2543 S23: 0.0221 REMARK 3 S31: -0.0129 S32: 0.4154 S33: -0.0357 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 56 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4216 -2.0871 83.5981 REMARK 3 T TENSOR REMARK 3 T11: 0.3345 T22: 0.5783 REMARK 3 T33: 0.5822 T12: 0.1052 REMARK 3 T13: 0.0392 T23: 0.0612 REMARK 3 L TENSOR REMARK 3 L11: 3.9284 L22: 8.1236 REMARK 3 L33: 0.8103 L12: 3.0713 REMARK 3 L13: 0.6512 L23: 0.3248 REMARK 3 S TENSOR REMARK 3 S11: 0.0348 S12: -0.2623 S13: -1.0391 REMARK 3 S21: 0.0986 S22: -0.2231 S23: 0.1308 REMARK 3 S31: 0.5716 S32: 0.4463 S33: 0.1067 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 67 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0372 8.1200 81.0677 REMARK 3 T TENSOR REMARK 3 T11: 0.2099 T22: 0.4744 REMARK 3 T33: 0.2945 T12: -0.0280 REMARK 3 T13: -0.0186 T23: 0.0591 REMARK 3 L TENSOR REMARK 3 L11: 1.9753 L22: 2.0170 REMARK 3 L33: 2.7335 L12: 0.2588 REMARK 3 L13: -0.3125 L23: -0.7716 REMARK 3 S TENSOR REMARK 3 S11: -0.0127 S12: -0.1053 S13: -0.3974 REMARK 3 S21: -0.0718 S22: 0.1415 S23: 0.0859 REMARK 3 S31: 0.2448 S32: -0.2298 S33: -0.1144 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 96 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0439 0.1936 96.9479 REMARK 3 T TENSOR REMARK 3 T11: 0.4211 T22: 0.7841 REMARK 3 T33: 0.3866 T12: -0.0251 REMARK 3 T13: -0.0913 T23: 0.1685 REMARK 3 L TENSOR REMARK 3 L11: 2.5189 L22: 5.3271 REMARK 3 L33: 2.2458 L12: -0.3807 REMARK 3 L13: -2.2301 L23: -0.8901 REMARK 3 S TENSOR REMARK 3 S11: 0.0458 S12: -0.4857 S13: -0.2509 REMARK 3 S21: 0.5227 S22: -0.0418 S23: -0.1217 REMARK 3 S31: 0.6493 S32: 0.2950 S33: -0.0014 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 111 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3551 9.0526 93.7887 REMARK 3 T TENSOR REMARK 3 T11: 0.3441 T22: 0.8175 REMARK 3 T33: 0.4068 T12: -0.0222 REMARK 3 T13: 0.0446 T23: 0.0751 REMARK 3 L TENSOR REMARK 3 L11: 5.9403 L22: 1.9836 REMARK 3 L33: 4.0208 L12: -1.2919 REMARK 3 L13: 4.2239 L23: -1.3275 REMARK 3 S TENSOR REMARK 3 S11: 0.1644 S12: -0.5103 S13: -0.1644 REMARK 3 S21: 0.1952 S22: 0.0724 S23: 0.5075 REMARK 3 S31: 0.2005 S32: -0.4491 S33: -0.2913 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 126 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3409 14.1658 92.0456 REMARK 3 T TENSOR REMARK 3 T11: 0.2866 T22: 0.5954 REMARK 3 T33: 0.2453 T12: -0.0021 REMARK 3 T13: 0.0299 T23: 0.0390 REMARK 3 L TENSOR REMARK 3 L11: 1.8780 L22: 2.8261 REMARK 3 L33: 3.1672 L12: -0.1419 REMARK 3 L13: -0.5235 L23: -0.5063 REMARK 3 S TENSOR REMARK 3 S11: 0.0981 S12: -0.7535 S13: -0.1344 REMARK 3 S21: 0.3630 S22: -0.0099 S23: 0.0447 REMARK 3 S31: -0.4569 S32: -0.1591 S33: -0.0481 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 156 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3888 10.5511 101.8306 REMARK 3 T TENSOR REMARK 3 T11: 0.3669 T22: 0.7048 REMARK 3 T33: 0.2777 T12: -0.0255 REMARK 3 T13: 0.0647 T23: 0.0420 REMARK 3 L TENSOR REMARK 3 L11: 3.1110 L22: 2.5303 REMARK 3 L33: 3.0891 L12: 0.0651 REMARK 3 L13: 0.8112 L23: -0.3771 REMARK 3 S TENSOR REMARK 3 S11: -0.0035 S12: -0.8367 S13: 0.0536 REMARK 3 S21: 0.6861 S22: -0.0516 S23: 0.3257 REMARK 3 S31: -0.0578 S32: -0.2020 S33: 0.0125 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 29 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3965 3.1499 -1.3727 REMARK 3 T TENSOR REMARK 3 T11: 0.4536 T22: 0.3409 REMARK 3 T33: 0.2424 T12: -0.0561 REMARK 3 T13: -0.0808 T23: -0.0289 REMARK 3 L TENSOR REMARK 3 L11: 4.9179 L22: 4.3571 REMARK 3 L33: 3.8756 L12: 0.2496 REMARK 3 L13: -3.0165 L23: -2.7199 REMARK 3 S TENSOR REMARK 3 S11: -0.2420 S12: 0.1220 S13: -0.2818 REMARK 3 S21: -0.3961 S22: 0.2853 S23: 0.1215 REMARK 3 S31: 0.4918 S32: -0.7926 S33: -0.1140 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 43 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.1842 22.5711 -8.3100 REMARK 3 T TENSOR REMARK 3 T11: 0.3835 T22: 0.4102 REMARK 3 T33: 0.5980 T12: 0.0724 REMARK 3 T13: 0.1658 T23: 0.0290 REMARK 3 L TENSOR REMARK 3 L11: 7.7313 L22: 5.6875 REMARK 3 L33: 3.6736 L12: 3.4415 REMARK 3 L13: 0.0944 L23: 0.0705 REMARK 3 S TENSOR REMARK 3 S11: -0.0665 S12: 0.3894 S13: 0.2832 REMARK 3 S21: -0.7533 S22: 0.0037 S23: -1.2504 REMARK 3 S31: 0.1696 S32: 0.9601 S33: -0.0454 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 61 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.5889 19.8476 -4.1650 REMARK 3 T TENSOR REMARK 3 T11: 0.4315 T22: 0.2053 REMARK 3 T33: 0.2455 T12: 0.0472 REMARK 3 T13: 0.0146 T23: -0.0085 REMARK 3 L TENSOR REMARK 3 L11: 2.2120 L22: 3.5645 REMARK 3 L33: 2.2529 L12: 0.6417 REMARK 3 L13: -0.7263 L23: -0.5985 REMARK 3 S TENSOR REMARK 3 S11: 0.0687 S12: -0.1949 S13: 0.1012 REMARK 3 S21: -0.1408 S22: -0.1031 S23: -0.2487 REMARK 3 S31: -0.0989 S32: 0.2026 S33: 0.0166 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 96 THROUGH 110 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0984 12.9088 -20.2626 REMARK 3 T TENSOR REMARK 3 T11: 0.7812 T22: 0.4446 REMARK 3 T33: 0.4743 T12: 0.0471 REMARK 3 T13: 0.2154 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 5.9314 L22: 1.5843 REMARK 3 L33: 1.9329 L12: -0.2981 REMARK 3 L13: -0.5383 L23: 0.3063 REMARK 3 S TENSOR REMARK 3 S11: -0.0724 S12: 0.5105 S13: 0.2771 REMARK 3 S21: -0.8459 S22: 0.1649 S23: -0.7493 REMARK 3 S31: 0.3540 S32: 1.0318 S33: -0.0921 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 111 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9335 31.9026 -17.0371 REMARK 3 T TENSOR REMARK 3 T11: 0.8845 T22: 0.2510 REMARK 3 T33: 0.3905 T12: 0.0426 REMARK 3 T13: 0.0472 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 0.7986 L22: 1.0827 REMARK 3 L33: 2.0321 L12: 0.0230 REMARK 3 L13: -0.3712 L23: 0.0401 REMARK 3 S TENSOR REMARK 3 S11: 0.2589 S12: 0.1197 S13: 0.3174 REMARK 3 S21: -0.5652 S22: -0.2768 S23: -0.0837 REMARK 3 S31: -0.4064 S32: -0.1768 S33: -0.1014 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 126 THROUGH 155 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9477 17.6526 -15.1990 REMARK 3 T TENSOR REMARK 3 T11: 0.6556 T22: 0.2537 REMARK 3 T33: 0.2155 T12: -0.0422 REMARK 3 T13: -0.0100 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.9628 L22: 0.8973 REMARK 3 L33: 3.6913 L12: -0.5084 REMARK 3 L13: 0.2873 L23: 0.8981 REMARK 3 S TENSOR REMARK 3 S11: 0.0147 S12: 0.3445 S13: -0.0685 REMARK 3 S21: -1.1578 S22: 0.0811 S23: -0.1202 REMARK 3 S31: 0.1657 S32: -0.4826 S33: -0.0126 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 156 THROUGH 172 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7462 22.6354 -21.2309 REMARK 3 T TENSOR REMARK 3 T11: 1.1341 T22: 0.3315 REMARK 3 T33: 0.1379 T12: 0.0005 REMARK 3 T13: 0.2221 T23: 0.0572 REMARK 3 L TENSOR REMARK 3 L11: 3.0667 L22: 0.1732 REMARK 3 L33: 1.1176 L12: -0.6600 REMARK 3 L13: 0.1320 L23: 0.0530 REMARK 3 S TENSOR REMARK 3 S11: -0.0044 S12: 0.5474 S13: 0.4720 REMARK 3 S21: -1.3599 S22: -0.1763 S23: -0.4921 REMARK 3 S31: 0.1177 S32: 0.3307 S33: -0.4393 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 173 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0046 21.7069 -24.4959 REMARK 3 T TENSOR REMARK 3 T11: 0.9845 T22: 0.4729 REMARK 3 T33: 0.2288 T12: 0.0633 REMARK 3 T13: -0.1899 T23: 0.0655 REMARK 3 L TENSOR REMARK 3 L11: 3.3410 L22: 1.6998 REMARK 3 L33: 2.2002 L12: 0.5137 REMARK 3 L13: -1.7063 L23: 1.0976 REMARK 3 S TENSOR REMARK 3 S11: 0.5805 S12: 0.6949 S13: 0.1021 REMARK 3 S21: -1.4606 S22: 0.1316 S23: 0.7640 REMARK 3 S31: 0.4041 S32: -0.9005 S33: 0.0732 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 196 THROUGH 217 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0421 22.7317 -29.7538 REMARK 3 T TENSOR REMARK 3 T11: 1.0355 T22: 0.5884 REMARK 3 T33: 0.2590 T12: 0.0480 REMARK 3 T13: 0.1080 T23: 0.0883 REMARK 3 L TENSOR REMARK 3 L11: 3.7547 L22: 3.3841 REMARK 3 L33: 1.9449 L12: -2.5677 REMARK 3 L13: 1.9788 L23: -0.2196 REMARK 3 S TENSOR REMARK 3 S11: 0.3196 S12: 0.5902 S13: 0.2187 REMARK 3 S21: -1.0686 S22: -0.3460 S23: -0.7139 REMARK 3 S31: -0.2186 S32: 0.7723 S33: 0.0387 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6U09 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243664. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12011 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 202752 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.130 REMARK 200 RESOLUTION RANGE LOW (A) : 146.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 66.2 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.13 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 1.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 2.29300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4DT6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, MPD, PEG 6K, NDSB-256, PH 7.2, REMARK 280 BATCH MODE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 VAL A 28 REMARK 465 ALA A 29 REMARK 465 THR A 205 REMARK 465 LYS A 206 REMARK 465 SER A 207 REMARK 465 GLY A 208 REMARK 465 SER A 209 REMARK 465 THR A 210 REMARK 465 VAL B 28 REMARK 465 ALA B 29 REMARK 465 ASN B 30 REMARK 465 THR B 205 REMARK 465 LYS B 206 REMARK 465 SER B 207 REMARK 465 GLY B 208 REMARK 465 SER B 209 REMARK 465 THR B 210 REMARK 465 LYS C 206 REMARK 465 SER C 207 REMARK 465 GLY C 208 REMARK 465 SER C 209 REMARK 465 THR C 210 REMARK 465 THR C 211 REMARK 465 VAL D 28 REMARK 465 SER D 207 REMARK 465 GLY D 208 REMARK 465 SER D 209 REMARK 465 THR D 210 REMARK 465 THR D 211 REMARK 465 LYS D 212 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 32 CG CD OE1 OE2 REMARK 470 GLN A 57 CG CD OE1 NE2 REMARK 470 ARG A 109 CG CD NE CZ NH1 NH2 REMARK 470 THR A 211 OG1 CG2 REMARK 470 LYS A 212 CG CD CE NZ REMARK 470 LYS B 49 CG CD CE NZ REMARK 470 ARG B 61 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 LYS B 108 CG CD CE NZ REMARK 470 LYS B 159 CG CD CE NZ REMARK 470 LYS B 212 CG CD CE NZ REMARK 470 VAL C 28 CG1 CG2 REMARK 470 GLU C 32 CG CD OE1 OE2 REMARK 470 LYS C 49 CG CD CE NZ REMARK 470 LYS C 52 CG CD CE NZ REMARK 470 LYS C 54 CG CD CE NZ REMARK 470 THR C 55 OG1 CG2 REMARK 470 GLN C 57 CG CD OE1 NE2 REMARK 470 LYS C 159 CG CD CE NZ REMARK 470 GLU C 185 CG CD OE1 OE2 REMARK 470 LYS C 192 CG CD CE NZ REMARK 470 GLN C 198 CG CD OE1 NE2 REMARK 470 THR C 205 OG1 CG2 REMARK 470 LYS C 212 CG CD CE NZ REMARK 470 VAL C 216 CG1 CG2 REMARK 470 ASN D 30 CG OD1 ND2 REMARK 470 GLU D 32 CG CD OE1 OE2 REMARK 470 HIS D 33 CG ND1 CD2 CE1 NE2 REMARK 470 ASN D 50 CG OD1 ND2 REMARK 470 LYS D 52 CG CD CE NZ REMARK 470 LYS D 54 CG CD CE NZ REMARK 470 THR D 55 OG1 CG2 REMARK 470 TRP D 56 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 56 CZ3 CH2 REMARK 470 GLN D 57 CG CD OE1 NE2 REMARK 470 LEU D 60 CG CD1 CD2 REMARK 470 LYS D 119 CG CD CE NZ REMARK 470 LYS D 159 CG CD CE NZ REMARK 470 LYS D 192 CG CD CE NZ REMARK 470 VAL D 194 CG1 CG2 REMARK 470 LYS D 206 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 67 25.39 -147.51 REMARK 500 ASP A 143 -135.55 53.57 REMARK 500 ASP B 67 30.23 -148.32 REMARK 500 ASP B 143 -122.11 46.45 REMARK 500 LYS B 212 131.95 -170.77 REMARK 500 ASP C 67 23.66 -143.88 REMARK 500 ASP C 143 -136.55 61.98 REMARK 500 THR D 55 -153.58 -111.00 REMARK 500 TRP D 56 -129.21 45.70 REMARK 500 ASP D 67 24.23 -145.21 REMARK 500 ASP D 143 -131.40 55.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EI9 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide EI9 B 301 and LYS B REMARK 800 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide EI9 C 301 and LYS C REMARK 800 162 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide EI9 D 301 and LYS D REMARK 800 162 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6U06 RELATED DB: PDB REMARK 900 THE SAME PROTEIN, DIFFERENT LIGANDS DBREF 6U09 A 28 217 UNP P63073 IF4E_MOUSE 28 217 DBREF 6U09 B 28 217 UNP P63073 IF4E_MOUSE 28 217 DBREF 6U09 C 28 217 UNP P63073 IF4E_MOUSE 28 217 DBREF 6U09 D 28 217 UNP P63073 IF4E_MOUSE 28 217 SEQRES 1 A 190 VAL ALA ASN PRO GLU HIS TYR ILE LYS HIS PRO LEU GLN SEQRES 2 A 190 ASN ARG TRP ALA LEU TRP PHE PHE LYS ASN ASP LYS SER SEQRES 3 A 190 LYS THR TRP GLN ALA ASN LEU ARG LEU ILE SER LYS PHE SEQRES 4 A 190 ASP THR VAL GLU ASP PHE TRP ALA LEU TYR ASN HIS ILE SEQRES 5 A 190 GLN LEU SER SER ASN LEU MET PRO GLY CYS ASP TYR SER SEQRES 6 A 190 LEU PHE LYS ASP GLY ILE GLU PRO MET TRP GLU ASP GLU SEQRES 7 A 190 LYS ASN LYS ARG GLY GLY ARG TRP LEU ILE THR LEU ASN SEQRES 8 A 190 LYS GLN GLN ARG ARG SER ASP LEU ASP ARG PHE TRP LEU SEQRES 9 A 190 GLU THR LEU LEU CYS LEU ILE GLY GLU SER PHE ASP ASP SEQRES 10 A 190 TYR SER ASP ASP VAL CYS GLY ALA VAL VAL ASN VAL ARG SEQRES 11 A 190 ALA LYS GLY ASP LYS ILE ALA ILE TRP THR THR GLU CYS SEQRES 12 A 190 GLU ASN ARG ASP ALA VAL THR HIS ILE GLY ARG VAL TYR SEQRES 13 A 190 LYS GLU ARG LEU GLY LEU PRO PRO LYS ILE VAL ILE GLY SEQRES 14 A 190 TYR GLN SER HIS ALA ASP THR ALA THR LYS SER GLY SER SEQRES 15 A 190 THR THR LYS ASN ARG PHE VAL VAL SEQRES 1 B 190 VAL ALA ASN PRO GLU HIS TYR ILE LYS HIS PRO LEU GLN SEQRES 2 B 190 ASN ARG TRP ALA LEU TRP PHE PHE LYS ASN ASP LYS SER SEQRES 3 B 190 LYS THR TRP GLN ALA ASN LEU ARG LEU ILE SER LYS PHE SEQRES 4 B 190 ASP THR VAL GLU ASP PHE TRP ALA LEU TYR ASN HIS ILE SEQRES 5 B 190 GLN LEU SER SER ASN LEU MET PRO GLY CYS ASP TYR SER SEQRES 6 B 190 LEU PHE LYS ASP GLY ILE GLU PRO MET TRP GLU ASP GLU SEQRES 7 B 190 LYS ASN LYS ARG GLY GLY ARG TRP LEU ILE THR LEU ASN SEQRES 8 B 190 LYS GLN GLN ARG ARG SER ASP LEU ASP ARG PHE TRP LEU SEQRES 9 B 190 GLU THR LEU LEU CYS LEU ILE GLY GLU SER PHE ASP ASP SEQRES 10 B 190 TYR SER ASP ASP VAL CYS GLY ALA VAL VAL ASN VAL ARG SEQRES 11 B 190 ALA LYS GLY ASP LYS ILE ALA ILE TRP THR THR GLU CYS SEQRES 12 B 190 GLU ASN ARG ASP ALA VAL THR HIS ILE GLY ARG VAL TYR SEQRES 13 B 190 LYS GLU ARG LEU GLY LEU PRO PRO LYS ILE VAL ILE GLY SEQRES 14 B 190 TYR GLN SER HIS ALA ASP THR ALA THR LYS SER GLY SER SEQRES 15 B 190 THR THR LYS ASN ARG PHE VAL VAL SEQRES 1 C 190 VAL ALA ASN PRO GLU HIS TYR ILE LYS HIS PRO LEU GLN SEQRES 2 C 190 ASN ARG TRP ALA LEU TRP PHE PHE LYS ASN ASP LYS SER SEQRES 3 C 190 LYS THR TRP GLN ALA ASN LEU ARG LEU ILE SER LYS PHE SEQRES 4 C 190 ASP THR VAL GLU ASP PHE TRP ALA LEU TYR ASN HIS ILE SEQRES 5 C 190 GLN LEU SER SER ASN LEU MET PRO GLY CYS ASP TYR SER SEQRES 6 C 190 LEU PHE LYS ASP GLY ILE GLU PRO MET TRP GLU ASP GLU SEQRES 7 C 190 LYS ASN LYS ARG GLY GLY ARG TRP LEU ILE THR LEU ASN SEQRES 8 C 190 LYS GLN GLN ARG ARG SER ASP LEU ASP ARG PHE TRP LEU SEQRES 9 C 190 GLU THR LEU LEU CYS LEU ILE GLY GLU SER PHE ASP ASP SEQRES 10 C 190 TYR SER ASP ASP VAL CYS GLY ALA VAL VAL ASN VAL ARG SEQRES 11 C 190 ALA LYS GLY ASP LYS ILE ALA ILE TRP THR THR GLU CYS SEQRES 12 C 190 GLU ASN ARG ASP ALA VAL THR HIS ILE GLY ARG VAL TYR SEQRES 13 C 190 LYS GLU ARG LEU GLY LEU PRO PRO LYS ILE VAL ILE GLY SEQRES 14 C 190 TYR GLN SER HIS ALA ASP THR ALA THR LYS SER GLY SER SEQRES 15 C 190 THR THR LYS ASN ARG PHE VAL VAL SEQRES 1 D 190 VAL ALA ASN PRO GLU HIS TYR ILE LYS HIS PRO LEU GLN SEQRES 2 D 190 ASN ARG TRP ALA LEU TRP PHE PHE LYS ASN ASP LYS SER SEQRES 3 D 190 LYS THR TRP GLN ALA ASN LEU ARG LEU ILE SER LYS PHE SEQRES 4 D 190 ASP THR VAL GLU ASP PHE TRP ALA LEU TYR ASN HIS ILE SEQRES 5 D 190 GLN LEU SER SER ASN LEU MET PRO GLY CYS ASP TYR SER SEQRES 6 D 190 LEU PHE LYS ASP GLY ILE GLU PRO MET TRP GLU ASP GLU SEQRES 7 D 190 LYS ASN LYS ARG GLY GLY ARG TRP LEU ILE THR LEU ASN SEQRES 8 D 190 LYS GLN GLN ARG ARG SER ASP LEU ASP ARG PHE TRP LEU SEQRES 9 D 190 GLU THR LEU LEU CYS LEU ILE GLY GLU SER PHE ASP ASP SEQRES 10 D 190 TYR SER ASP ASP VAL CYS GLY ALA VAL VAL ASN VAL ARG SEQRES 11 D 190 ALA LYS GLY ASP LYS ILE ALA ILE TRP THR THR GLU CYS SEQRES 12 D 190 GLU ASN ARG ASP ALA VAL THR HIS ILE GLY ARG VAL TYR SEQRES 13 D 190 LYS GLU ARG LEU GLY LEU PRO PRO LYS ILE VAL ILE GLY SEQRES 14 D 190 TYR GLN SER HIS ALA ASP THR ALA THR LYS SER GLY SER SEQRES 15 D 190 THR THR LYS ASN ARG PHE VAL VAL HET EI9 A 301 31 HET EI9 B 301 31 HET EI9 C 301 31 HET EI9 D 301 31 HETNAM EI9 3-{(1-OXO-1,2-DIHYDROISOQUINOLIN-7-YL)[(PYRIDIN-4-YL) HETNAM 2 EI9 METHYL]SULFAMOYL}BENZENE-1-SULFONYL FLUORIDE FORMUL 5 EI9 4(C21 H16 F N3 O5 S2) FORMUL 9 HOH *243(H2 O) HELIX 1 AA1 ASN A 30 TYR A 34 5 5 HELIX 2 AA2 TRP A 56 ALA A 58 5 3 HELIX 3 AA3 VAL A 69 ASN A 77 1 9 HELIX 4 AA4 LEU A 81 LEU A 85 5 5 HELIX 5 AA5 GLN A 120 ASP A 125 1 6 HELIX 6 AA6 ASP A 125 GLY A 139 1 15 HELIX 7 AA7 PHE A 142 ASP A 147 5 6 HELIX 8 AA8 ASN A 172 LEU A 187 1 16 HELIX 9 AA9 HIS A 200 ALA A 204 1 5 HELIX 10 AB1 THR B 55 ASN B 59 1 5 HELIX 11 AB2 VAL B 69 ILE B 79 1 11 HELIX 12 AB3 LEU B 81 LEU B 85 5 5 HELIX 13 AB4 GLN B 120 ASP B 125 1 6 HELIX 14 AB5 ASP B 125 GLY B 139 1 15 HELIX 15 AB6 PHE B 142 ASP B 147 5 6 HELIX 16 AB7 ASN B 172 LEU B 187 1 16 HELIX 17 AB8 HIS B 200 ALA B 204 1 5 HELIX 18 AB9 ASN C 30 ILE C 35 1 6 HELIX 19 AC1 TRP C 56 ALA C 58 5 3 HELIX 20 AC2 VAL C 69 ILE C 79 1 11 HELIX 21 AC3 LEU C 81 LEU C 85 5 5 HELIX 22 AC4 GLN C 120 ASP C 125 1 6 HELIX 23 AC5 ASP C 125 GLY C 139 1 15 HELIX 24 AC6 PHE C 142 ASP C 147 5 6 HELIX 25 AC7 ASN C 172 GLY C 188 1 17 HELIX 26 AC8 HIS C 200 ALA C 204 1 5 HELIX 27 AC9 ASN D 30 ILE D 35 1 6 HELIX 28 AD1 THR D 55 ASN D 59 5 5 HELIX 29 AD2 VAL D 69 ASN D 77 1 9 HELIX 30 AD3 LEU D 81 LEU D 85 5 5 HELIX 31 AD4 GLN D 120 ASP D 125 1 6 HELIX 32 AD5 ASP D 125 GLY D 139 1 15 HELIX 33 AD6 PHE D 142 ASP D 147 5 6 HELIX 34 AD7 ASN D 172 GLY D 188 1 17 HELIX 35 AD8 HIS D 200 THR D 205 1 6 SHEET 1 AA1 8 LEU A 60 THR A 68 0 SHEET 2 AA1 8 PRO A 38 PHE A 48 -1 N PHE A 47 O ARG A 61 SHEET 3 AA1 8 ASP A 90 LYS A 95 -1 O PHE A 94 N ALA A 44 SHEET 4 AA1 8 VAL A 149 ASN A 155 -1 O ALA A 152 N LEU A 93 SHEET 5 AA1 8 LYS A 162 THR A 167 -1 O TRP A 166 N CYS A 150 SHEET 6 AA1 8 GLY A 111 THR A 116 -1 N ILE A 115 O ILE A 163 SHEET 7 AA1 8 GLY A 196 SER A 199 -1 O GLN A 198 N ARG A 112 SHEET 8 AA1 8 PHE A 215 VAL A 216 -1 O PHE A 215 N TYR A 197 SHEET 1 AA2 8 LEU B 60 THR B 68 0 SHEET 2 AA2 8 PRO B 38 PHE B 48 -1 N LEU B 45 O ILE B 63 SHEET 3 AA2 8 ASP B 90 LYS B 95 -1 O SER B 92 N TRP B 46 SHEET 4 AA2 8 VAL B 149 ASN B 155 -1 O CYS B 150 N LYS B 95 SHEET 5 AA2 8 LYS B 162 THR B 167 -1 O TRP B 166 N CYS B 150 SHEET 6 AA2 8 GLY B 111 THR B 116 -1 N ILE B 115 O ILE B 163 SHEET 7 AA2 8 GLY B 196 SER B 199 -1 O GLY B 196 N LEU B 114 SHEET 8 AA2 8 PHE B 215 VAL B 216 -1 O PHE B 215 N TYR B 197 SHEET 1 AA3 8 LEU C 60 THR C 68 0 SHEET 2 AA3 8 PRO C 38 PHE C 48 -1 N PHE C 47 O ARG C 61 SHEET 3 AA3 8 ASP C 90 LYS C 95 -1 O SER C 92 N TRP C 46 SHEET 4 AA3 8 VAL C 149 ASN C 155 -1 O VAL C 154 N TYR C 91 SHEET 5 AA3 8 LYS C 162 THR C 167 -1 O TRP C 166 N GLY C 151 SHEET 6 AA3 8 GLY C 111 THR C 116 -1 N ILE C 115 O ILE C 163 SHEET 7 AA3 8 ILE C 195 SER C 199 -1 O GLY C 196 N LEU C 114 SHEET 8 AA3 8 PHE C 215 VAL C 217 -1 O PHE C 215 N TYR C 197 SHEET 1 AA4 8 ARG D 61 THR D 68 0 SHEET 2 AA4 8 PRO D 38 LYS D 49 -1 N PHE D 47 O ARG D 61 SHEET 3 AA4 8 CYS D 89 LYS D 95 -1 O SER D 92 N TRP D 46 SHEET 4 AA4 8 VAL D 149 ASN D 155 -1 O ALA D 152 N LEU D 93 SHEET 5 AA4 8 ASP D 161 THR D 167 -1 O TRP D 166 N GLY D 151 SHEET 6 AA4 8 GLY D 111 LEU D 117 -1 N ILE D 115 O ILE D 163 SHEET 7 AA4 8 GLY D 196 SER D 199 -1 O GLN D 198 N ARG D 112 SHEET 8 AA4 8 PHE D 215 VAL D 216 -1 O PHE D 215 N TYR D 197 LINK NZ LYS A 162 S2 EI9 A 301 1555 1555 1.60 LINK NZ LYS B 162 S2 EI9 B 301 1555 1555 1.60 LINK NZ LYS C 162 S2 EI9 C 301 1555 1555 1.60 LINK NZ LYS D 162 S2 EI9 D 301 1555 1555 1.60 SITE 1 AC1 14 TRP A 56 ASP A 90 SER A 92 PRO A 100 SITE 2 AC1 14 MET A 101 TRP A 102 GLU A 103 ARG A 112 SITE 3 AC1 14 VAL A 153 ASN A 155 ARG A 157 LYS A 162 SITE 4 AC1 14 TRP A 166 HOH A 413 SITE 1 AC2 17 TRP B 56 ASP B 90 SER B 92 PRO B 100 SITE 2 AC2 17 MET B 101 TRP B 102 GLU B 103 ARG B 112 SITE 3 AC2 17 ILE B 115 VAL B 153 VAL B 154 ASN B 155 SITE 4 AC2 17 ARG B 157 ASP B 161 ILE B 163 TRP B 166 SITE 5 AC2 17 HOH B 442 SITE 1 AC3 14 TRP C 56 ASP C 90 SER C 92 PRO C 100 SITE 2 AC3 14 MET C 101 TRP C 102 GLU C 103 ARG C 112 SITE 3 AC3 14 ILE C 115 VAL C 154 ASN C 155 ARG C 157 SITE 4 AC3 14 ASP C 161 ILE C 163 SITE 1 AC4 14 ASP D 90 SER D 92 PRO D 100 MET D 101 SITE 2 AC4 14 TRP D 102 GLU D 103 ARG D 112 ILE D 115 SITE 3 AC4 14 VAL D 154 ASN D 155 ARG D 157 ASP D 161 SITE 4 AC4 14 ILE D 163 TRP D 166 CRYST1 38.100 38.240 147.790 95.50 87.28 101.85 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026247 0.005505 -0.000767 0.00000 SCALE2 0.000000 0.026720 0.002360 0.00000 SCALE3 0.000000 0.000000 0.006800 0.00000