HEADER    TRANSLATION                             16-AUG-19   6U1L              
TITLE     STRUCTURE OF TWO-DOMAIN TRANSLATIONAL REGULATOR YIH1 REVEALS A        
TITLE    2 POSSIBLE MECHANISM OF ACTION                                         
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PROTEIN IMPACT HOMOLOG;                                    
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 /  
SOURCE   3 S288C);                                                              
SOURCE   4 ORGANISM_COMMON: BAKER'S YEAST;                                      
SOURCE   5 ORGANISM_TAXID: 559292;                                              
SOURCE   6 STRAIN: ATCC 204508 / S288C;                                         
SOURCE   7 GENE: YIH1, YCR059C, YCR59C;                                         
SOURCE   8 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   9 EXPRESSION_SYSTEM_TAXID: 562                                         
KEYWDS    TRANSLATIONAL REGULATION, TRANSLATION                                 
EXPDTA    SOLUTION NMR                                                          
NUMMDL    10                                                                    
AUTHOR    E.HARJES,G.B.JAMESON,P.J.B.EDWARDS,A.K.GORONCY,T.LOO,G.E.NORRIS       
REVDAT   4   22-MAY-24 6U1L    1       REMARK                                   
REVDAT   3   14-JUN-23 6U1L    1       REMARK                                   
REVDAT   2   17-FEB-21 6U1L    1       JRNL                                     
REVDAT   1   10-FEB-21 6U1L    0                                                
JRNL        AUTH   E.HARJES,G.B.JAMESON,Y.H.TU,N.BURR,T.S.LOO,A.K.GORONCY,      
JRNL        AUTH 2 P.J.B.EDWARDS,S.HARJES,B.MUNRO,C.GOBL,E.SATTLEGGER,          
JRNL        AUTH 3 G.E.NORRIS                                                   
JRNL        TITL   EXPERIMENTALLY BASED STRUCTURAL MODEL OF YIH1 PROVIDES       
JRNL        TITL 2 INSIGHT INTO ITS FUNCTION IN CONTROLLING THE KEY             
JRNL        TITL 3 TRANSLATIONAL REGULATOR GCN2.                                
JRNL        REF    FEBS LETT.                    V. 595   324 2021              
JRNL        REFN                   ISSN 0014-5793                               
JRNL        PMID   33156522                                                     
JRNL        DOI    10.1002/1873-3468.13990                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : X-PLOR NIH                                           
REMARK   3   AUTHORS     : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE             
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: EXPLICIT WATER                            
REMARK   4                                                                      
REMARK   4 6U1L COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-AUG-19.                  
REMARK 100 THE DEPOSITION ID IS D_1000243731.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 7.2                                
REMARK 210  IONIC STRENGTH                 : 30                                 
REMARK 210  PRESSURE                       : 1 ATM                              
REMARK 210  SAMPLE CONTENTS                : 1 MM U-13C-15N YIH1, 90% H2O/10%   
REMARK 210                                   D2O                                
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 3D HNCA; 3D HNCACB; 3D 1H-15N      
REMARK 210                                   NOESY; 2D 1H-15N HSQC; 2D 1H-13C   
REMARK 210                                   HSQC ALIPHATIC; 3D H(CCO)NH; 3D    
REMARK 210                                   HCCH-TOCSY                         
REMARK 210  SPECTROMETER FIELD STRENGTH    : 700 MHZ                            
REMARK 210  SPECTROMETER MODEL             : AVANCE                             
REMARK 210  SPECTROMETER MANUFACTURER      : BRUKER                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : CNS, CARA, CANDID                  
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 40                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 10                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   HZ2  LYS A   169     OD1  ASP A   199              1.60            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ASP A   2      -74.62   -133.54                                   
REMARK 500  1 PRO A  20      -82.50    -78.28                                   
REMARK 500  1 SER A  31      -56.75      7.44                                   
REMARK 500  1 HIS A  40       42.60     73.26                                   
REMARK 500  1 GLU A  41     -109.06    -69.36                                   
REMARK 500  1 TYR A  42      -18.85   -176.87                                   
REMARK 500  1 HIS A  52       40.07    -99.71                                   
REMARK 500  1 TYR A  53      167.37    -44.21                                   
REMARK 500  1 PRO A  54      -52.91    -20.99                                   
REMARK 500  1 GLU A  57      -69.34   -140.56                                   
REMARK 500  1 ALA A  58      165.52    169.76                                   
REMARK 500  1 LEU A  70       30.32    -80.57                                   
REMARK 500  1 VAL A  92       43.34    -89.70                                   
REMARK 500  1 CYS A  99      -70.98    165.35                                   
REMARK 500  1 TYR A 112     -156.13     64.14                                   
REMARK 500  1 VAL A 113       82.52     70.12                                   
REMARK 500  1 SER A 138       13.76   -166.41                                   
REMARK 500  1 ASP A 139       78.25   -114.03                                   
REMARK 500  1 ARG A 144      108.06    -59.23                                   
REMARK 500  1 THR A 156     -136.66   -107.16                                   
REMARK 500  1 SER A 157     -176.53    -64.98                                   
REMARK 500  1 ASP A 200       16.91   -169.30                                   
REMARK 500  1 ASP A 218       71.05     57.96                                   
REMARK 500  1 ILE A 235      -55.49     70.89                                   
REMARK 500  1 ALA A 254        3.47    -59.22                                   
REMARK 500  1 ASP A 257       81.73   -151.55                                   
REMARK 500  2 ASP A   3       42.14    -73.42                                   
REMARK 500  2 TYR A  19       77.82   -152.13                                   
REMARK 500  2 PRO A  20      -76.94    -56.00                                   
REMARK 500  2 ASP A  21      -17.80    -48.90                                   
REMARK 500  2 LEU A  23       60.95   -101.10                                   
REMARK 500  2 HIS A  40      -25.28   -149.06                                   
REMARK 500  2 GLU A  41       78.75     37.83                                   
REMARK 500  2 TYR A  42      -48.67   -141.84                                   
REMARK 500  2 HIS A  52       48.09   -105.30                                   
REMARK 500  2 TYR A  53      166.85    -44.20                                   
REMARK 500  2 PRO A  54      -55.09    -23.66                                   
REMARK 500  2 GLU A  57      -76.85   -147.75                                   
REMARK 500  2 ALA A  58      164.90    163.58                                   
REMARK 500  2 PRO A  59     -174.56    -68.28                                   
REMARK 500  2 SER A  69      -64.07   -153.29                                   
REMARK 500  2 SER A  97     -157.27   -161.04                                   
REMARK 500  2 CYS A  99      -65.95    163.72                                   
REMARK 500  2 GLU A 114      -55.36   -127.22                                   
REMARK 500  2 GLU A 117       50.66   -155.71                                   
REMARK 500  2 PRO A 121     -172.34    -67.11                                   
REMARK 500  2 SER A 138       26.19   -171.36                                   
REMARK 500  2 ASP A 139       76.76   -114.83                                   
REMARK 500  2 ARG A 144      105.13    -59.48                                   
REMARK 500  2 THR A 156     -134.30    -90.57                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     285 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 6BQI   RELATED DB: PDB                                   
REMARK 900 6BQI HAVE TWO DOMAINS TOGETHER, THIS ONE IS THE FIRST                
REMARK 900 RELATED ID: 30375   RELATED DB: BMRB                                 
DBREF  6U1L A    1   258  UNP    P25637   YIH1_YEAST       1    258             
SEQRES   1 A  258  MET ASP ASP ASP HIS GLU GLN LEU VAL GLU GLU LEU GLU          
SEQRES   2 A  258  ALA VAL GLU ALA ILE TYR PRO ASP LEU LEU SER LYS LYS          
SEQRES   3 A  258  GLN GLU ASP GLY SER ILE ILE VAL VAL LYS VAL PRO GLN          
SEQRES   4 A  258  HIS GLU TYR MET THR LEU GLN ILE SER PHE PRO THR HIS          
SEQRES   5 A  258  TYR PRO SER GLU GLU ALA PRO ASN VAL ILE GLU VAL GLY          
SEQRES   6 A  258  VAL CYS THR SER LEU ALA LYS ARG ASP LEU TYR ASP THR          
SEQRES   7 A  258  LYS TYR LEU GLN HIS LEU PHE GLN GLU VAL MET ASP SER          
SEQRES   8 A  258  VAL PHE HIS ARG GLY SER VAL CYS LEU PHE ASP PHE LEU          
SEQRES   9 A  258  THR GLU LEU ASP GLY VAL LEU TYR VAL GLU PRO GLU GLU          
SEQRES  10 A  258  GLU THR GLU PRO VAL GLN GLN SER ASP ILE PRO THR ASP          
SEQRES  11 A  258  PRO PHE GLU GLY TRP THR ALA SER ASP PRO ILE THR ASP          
SEQRES  12 A  258  ARG GLY SER THR PHE MET ALA PHE ALA ALA HIS VAL THR          
SEQRES  13 A  258  SER GLU GLU GLN ALA PHE ALA MET LEU ASP LEU LEU LYS          
SEQRES  14 A  258  THR ASP SER LYS MET ARG LYS ALA ASN HIS VAL MET SER          
SEQRES  15 A  258  ALA TRP ARG ILE LYS GLN ASP GLY SER ALA ALA THR TYR          
SEQRES  16 A  258  GLN ASP SER ASP ASP ASP GLY GLU THR ALA ALA GLY SER          
SEQRES  17 A  258  ARG MET LEU HIS LEU ILE THR ILE MET ASP VAL TRP ASN          
SEQRES  18 A  258  VAL ILE VAL VAL VAL ALA ARG TRP PHE GLY GLY ALA HIS          
SEQRES  19 A  258  ILE GLY PRO ASP ARG PHE LYS HIS ILE ASN SER THR ALA          
SEQRES  20 A  258  ARG GLU ALA VAL VAL ARG ALA GLY PHE ASP SER                  
HELIX    1 AA1 ASP A    3  TYR A   19  1                                  17    
HELIX    2 AA2 ASP A   77  ASP A   90  1                                  14    
HELIX    3 AA3 SER A   91  HIS A   94  5                                   4    
HELIX    4 AA4 CYS A   99  LEU A  111  1                                  13    
HELIX    5 AA5 SER A  157  THR A  170  1                                  14    
HELIX    6 AA6 GLU A  203  MET A  217  1                                  15    
HELIX    7 AA7 GLY A  236  ALA A  254  1                                  19    
SHEET    1 AA1 4 LEU A  23  LYS A  25  0                                        
SHEET    2 AA1 4 ILE A  32  LYS A  36 -1  O  VAL A  34   N  SER A  24           
SHEET    3 AA1 4 THR A  44  SER A  48 -1  O  LEU A  45   N  VAL A  35           
SHEET    4 AA1 4 ASN A  60  GLY A  65 -1  O  ASN A  60   N  SER A  48           
SHEET    1 AA2 4 THR A 136  THR A 142  0                                        
SHEET    2 AA2 4 SER A 146  HIS A 154 -1  O  ALA A 152   N  THR A 136           
SHEET    3 AA2 4 VAL A 222  PHE A 230 -1  O  TRP A 229   N  THR A 147           
SHEET    4 AA2 4 HIS A 179  ALA A 183 -1  N  MET A 181   O  VAL A 226           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1