HEADER BIOSYNTHETIC PROTEIN 16-AUG-19 6U1Q TITLE CRYSTAL STRUCTURE OF VPSO (VC0937) KINASE DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: VPSO; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE; SOURCE 3 ORGANISM_TAXID: 666; SOURCE 4 GENE: VPSO; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KINASE, POLYSACCHARIDE SYNTHESIS, AUTO-PHOSPHORYLATION, TYROSINE KEYWDS 2 KINASE, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.M.TRIPATHI,C.SCHWECHHEIMER,K.HERBERT,M.E.PORCELLA,E.R.BROWN, AUTHOR 2 F.H.YILDIZ,S.M.RUBIN REVDAT 4 15-NOV-23 6U1Q 1 REMARK REVDAT 3 11-OCT-23 6U1Q 1 REMARK REVDAT 2 07-OCT-20 6U1Q 1 JRNL REVDAT 1 19-AUG-20 6U1Q 0 JRNL AUTH C.SCHWECHHEIMER,K.HEBERT,S.TRIPATHI,P.K.SINGH,K.A.FLOYD, JRNL AUTH 2 E.R.BROWN,M.E.PORCELLA,J.OSORIO,J.T.M.KIBLEN,F.A.PAGLIAI, JRNL AUTH 3 K.DRESCHER,S.M.RUBIN,F.H.YILDIZ JRNL TITL A TYROSINE PHOSPHOREGULATORY SYSTEM CONTROLS JRNL TITL 2 EXOPOLYSACCHARIDE BIOSYNTHESIS AND BIOFILM FORMATION IN JRNL TITL 3 VIBRIO CHOLERAE. JRNL REF PLOS PATHOG. V. 16 08745 2020 JRNL REFN ESSN 1553-7374 JRNL PMID 32841296 JRNL DOI 10.1371/JOURNAL.PPAT.1008745 REMARK 2 REMARK 2 RESOLUTION. 2.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 16990 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 810 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8580 - 5.2128 1.00 2856 159 0.1694 0.2093 REMARK 3 2 5.2128 - 4.1386 1.00 2770 148 0.1414 0.1957 REMARK 3 3 4.1386 - 3.6158 0.99 2745 132 0.1697 0.2361 REMARK 3 4 3.6158 - 3.2853 0.98 2720 123 0.1827 0.2407 REMARK 3 5 3.2853 - 3.0499 0.94 2603 115 0.2316 0.2900 REMARK 3 6 3.0499 - 2.8701 0.91 2486 133 0.2743 0.3686 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.350 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 504 THROUGH 532 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.0286 82.1981 4.7805 REMARK 3 T TENSOR REMARK 3 T11: 0.4105 T22: 0.6003 REMARK 3 T33: 0.5163 T12: 0.1447 REMARK 3 T13: -0.0331 T23: 0.1668 REMARK 3 L TENSOR REMARK 3 L11: 9.5635 L22: 7.5139 REMARK 3 L33: 4.8533 L12: 7.2736 REMARK 3 L13: 2.0916 L23: 4.2801 REMARK 3 S TENSOR REMARK 3 S11: -0.7333 S12: 0.6831 S13: 0.0759 REMARK 3 S21: -0.4067 S22: 0.4551 S23: 0.5896 REMARK 3 S31: -0.1496 S32: -0.2692 S33: 0.3116 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 533 THROUGH 697 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.1447 101.1572 0.0195 REMARK 3 T TENSOR REMARK 3 T11: 0.6388 T22: 0.3534 REMARK 3 T33: 0.3903 T12: 0.0467 REMARK 3 T13: -0.0839 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 6.7130 L22: 5.3766 REMARK 3 L33: 4.4396 L12: -3.2053 REMARK 3 L13: -0.0284 L23: -0.3297 REMARK 3 S TENSOR REMARK 3 S11: 0.0207 S12: 0.0543 S13: 0.6631 REMARK 3 S21: -0.2149 S22: 0.0635 S23: 0.1095 REMARK 3 S31: -0.9231 S32: -0.2101 S33: -0.0656 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 698 THROUGH 711 ) REMARK 3 ORIGIN FOR THE GROUP (A): 49.7640 88.0288 -0.6654 REMARK 3 T TENSOR REMARK 3 T11: 0.4203 T22: 0.4669 REMARK 3 T33: 0.5093 T12: 0.0516 REMARK 3 T13: -0.0388 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 5.8074 L22: 9.6935 REMARK 3 L33: 2.4167 L12: 4.0298 REMARK 3 L13: 0.1219 L23: -1.8974 REMARK 3 S TENSOR REMARK 3 S11: 0.0861 S12: 0.7803 S13: -0.8930 REMARK 3 S21: -0.1047 S22: 0.8668 S23: -1.3639 REMARK 3 S31: 0.2164 S32: 0.3501 S33: -0.8278 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 508 THROUGH 532 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.0093 75.4273 8.4598 REMARK 3 T TENSOR REMARK 3 T11: 0.5382 T22: 0.7166 REMARK 3 T33: 0.5197 T12: 0.0911 REMARK 3 T13: 0.1517 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 4.3865 L22: 6.3109 REMARK 3 L33: 1.0500 L12: 4.9386 REMARK 3 L13: 1.7526 L23: 1.3887 REMARK 3 S TENSOR REMARK 3 S11: 0.2544 S12: -0.2463 S13: 0.7542 REMARK 3 S21: 0.5148 S22: -0.6007 S23: 0.9513 REMARK 3 S31: 0.0233 S32: 0.0647 S33: 0.5177 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 533 THROUGH 563 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8014 66.4525 11.8612 REMARK 3 T TENSOR REMARK 3 T11: 0.3210 T22: 0.6199 REMARK 3 T33: 0.4892 T12: 0.0066 REMARK 3 T13: 0.1095 T23: -0.0190 REMARK 3 L TENSOR REMARK 3 L11: 5.7191 L22: 3.9303 REMARK 3 L33: 5.8597 L12: -1.9387 REMARK 3 L13: -1.0200 L23: -1.4173 REMARK 3 S TENSOR REMARK 3 S11: 0.2370 S12: 0.0730 S13: 0.4769 REMARK 3 S21: -0.2438 S22: 0.1580 S23: -0.1277 REMARK 3 S31: 0.1517 S32: -0.6024 S33: -0.4203 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 564 THROUGH 653 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8748 71.6053 14.4990 REMARK 3 T TENSOR REMARK 3 T11: 0.3839 T22: 0.8436 REMARK 3 T33: 0.6806 T12: 0.1062 REMARK 3 T13: 0.1202 T23: 0.0394 REMARK 3 L TENSOR REMARK 3 L11: 9.1504 L22: 4.3204 REMARK 3 L33: 6.0280 L12: -2.1266 REMARK 3 L13: -1.8961 L23: 0.4729 REMARK 3 S TENSOR REMARK 3 S11: 0.5019 S12: -0.2488 S13: 0.8801 REMARK 3 S21: -0.0148 S22: 0.0903 S23: 0.4034 REMARK 3 S31: -0.6061 S32: -0.9679 S33: -0.5950 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 654 THROUGH 697 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6503 59.1181 22.0011 REMARK 3 T TENSOR REMARK 3 T11: 0.3823 T22: 0.7943 REMARK 3 T33: 0.4056 T12: -0.0816 REMARK 3 T13: 0.0918 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 4.4784 L22: 6.5468 REMARK 3 L33: 9.0158 L12: -1.8122 REMARK 3 L13: 1.7612 L23: -0.3014 REMARK 3 S TENSOR REMARK 3 S11: -0.1934 S12: -0.9733 S13: -0.1357 REMARK 3 S21: 0.3256 S22: 0.3050 S23: 0.4713 REMARK 3 S31: 0.2946 S32: -0.2546 S33: -0.1128 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 698 THROUGH 710 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.5031 62.7653 15.6543 REMARK 3 T TENSOR REMARK 3 T11: 0.3621 T22: 0.4142 REMARK 3 T33: 0.4946 T12: -0.0133 REMARK 3 T13: 0.1461 T23: -0.1340 REMARK 3 L TENSOR REMARK 3 L11: 6.9693 L22: 3.3025 REMARK 3 L33: 6.9393 L12: -2.3895 REMARK 3 L13: -2.8070 L23: -2.0099 REMARK 3 S TENSOR REMARK 3 S11: 0.5118 S12: 0.2490 S13: 0.2771 REMARK 3 S21: 0.4593 S22: 0.4253 S23: -0.1595 REMARK 3 S31: -0.1569 S32: 0.2362 S33: -0.6630 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 508 THROUGH 710 OR REMARK 3 RESID 801)) REMARK 3 SELECTION : (CHAIN B AND (RESID 508 THROUGH 576 OR REMARK 3 (RESID 577 AND (NAME N OR NAME CA OR NAME REMARK 3 C OR NAME O OR NAME CB )) OR RESID 578 REMARK 3 THROUGH 637 OR (RESID 638 AND (NAME N OR REMARK 3 NAME CA OR NAME C OR NAME O OR NAME CB )) REMARK 3 OR RESID 639 THROUGH 699 OR (RESID 700 REMARK 3 AND (NAME N OR NAME CA OR NAME C OR NAME REMARK 3 O OR NAME CB )) OR RESID 701 THROUGH 710 REMARK 3 OR RESID 801)) REMARK 3 ATOM PAIRS NUMBER : 1240 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6U1Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243743. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17506 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.870 REMARK 200 RESOLUTION RANGE LOW (A) : 44.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.03 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.66000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4JLV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM THIOCYANATE, PH 6.9, 20% REMARK 280 PEG 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 14.79667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.59333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 14.79667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.59333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 503 REMARK 465 LYS A 712 REMARK 465 LYS A 713 REMARK 465 ALA A 714 REMARK 465 SER A 715 REMARK 465 ARG A 716 REMARK 465 TYR A 717 REMARK 465 SER A 718 REMARK 465 GLY A 719 REMARK 465 TYR A 720 REMARK 465 TYR A 721 REMARK 465 HIS A 722 REMARK 465 TYR A 723 REMARK 465 GLN A 724 REMARK 465 ALA A 725 REMARK 465 TYR A 726 REMARK 465 TYR A 727 REMARK 465 GLY A 728 REMARK 465 GLU A 729 REMARK 465 GLU A 730 REMARK 465 THR A 731 REMARK 465 LYS A 732 REMARK 465 SER A 733 REMARK 465 GLY A 734 REMARK 465 ALA A 735 REMARK 465 ALA A 736 REMARK 465 LYS A 737 REMARK 465 LYS B 503 REMARK 465 LEU B 504 REMARK 465 ASP B 505 REMARK 465 ALA B 506 REMARK 465 LYS B 507 REMARK 465 ALA B 711 REMARK 465 LYS B 712 REMARK 465 LYS B 713 REMARK 465 ALA B 714 REMARK 465 SER B 715 REMARK 465 ARG B 716 REMARK 465 TYR B 717 REMARK 465 SER B 718 REMARK 465 GLY B 719 REMARK 465 TYR B 720 REMARK 465 TYR B 721 REMARK 465 HIS B 722 REMARK 465 TYR B 723 REMARK 465 GLN B 724 REMARK 465 ALA B 725 REMARK 465 TYR B 726 REMARK 465 TYR B 727 REMARK 465 GLY B 728 REMARK 465 GLU B 729 REMARK 465 GLU B 730 REMARK 465 THR B 731 REMARK 465 LYS B 732 REMARK 465 SER B 733 REMARK 465 GLY B 734 REMARK 465 ALA B 735 REMARK 465 ALA B 736 REMARK 465 LYS B 737 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 577 CG CD CE NZ REMARK 470 GLU A 638 CG CD OE1 OE2 REMARK 470 ARG A 700 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 534 72.67 -100.94 REMARK 500 GLN A 590 120.67 -39.27 REMARK 500 ASP A 605 45.91 -85.11 REMARK 500 ASN A 626 55.98 -118.28 REMARK 500 HIS A 681 -39.97 -131.88 REMARK 500 GLN A 697 -157.73 -114.57 REMARK 500 ASN B 534 71.93 -101.95 REMARK 500 ASP B 605 31.33 -80.60 REMARK 500 CYS B 606 -40.40 -132.40 REMARK 500 HIS B 681 -40.41 -132.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTR A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PTR B 801 DBREF1 6U1Q A 503 737 UNP A0A2S1ZT94_VIBCL DBREF2 6U1Q A A0A2S1ZT94 503 737 DBREF1 6U1Q B 503 737 UNP A0A2S1ZT94_VIBCL DBREF2 6U1Q B A0A2S1ZT94 503 737 SEQADV 6U1Q ALA A 519 UNP A0A2S1ZT9 GLU 519 ENGINEERED MUTATION SEQADV 6U1Q ALA A 522 UNP A0A2S1ZT9 ARG 522 ENGINEERED MUTATION SEQADV 6U1Q ALA A 525 UNP A0A2S1ZT9 ARG 525 ENGINEERED MUTATION SEQADV 6U1Q ALA B 519 UNP A0A2S1ZT9 GLU 519 ENGINEERED MUTATION SEQADV 6U1Q ALA B 522 UNP A0A2S1ZT9 ARG 522 ENGINEERED MUTATION SEQADV 6U1Q ALA B 525 UNP A0A2S1ZT9 ARG 525 ENGINEERED MUTATION SEQRES 1 A 235 LYS LEU ASP ALA LYS ALA TYR PHE ASP GLU LYS LEU ARG SEQRES 2 A 235 GLU LEU THR ALA ALA VAL ALA THR ILE ALA THR SER TYR SEQRES 3 A 235 LEU LEU ALA HIS VAL ASN GLN ASP GLN HIS VAL VAL MET SEQRES 4 A 235 LEU THR SER CYS LEU PRO GLY GLU GLY LYS THR THR SER SEQRES 5 A 235 SER LEU ASN LEU ALA LEU SER LEU ALA GLN MET GLU LYS SEQRES 6 A 235 THR LEU LEU ILE ASP CYS ASP LEU ARG LYS PRO ALA ILE SEQRES 7 A 235 ALA HIS ARG PHE GLY ILE SER GLY SER GLN PRO GLY VAL SEQRES 8 A 235 THR ASN LEU LEU ASN GLY THR GLN SER LEU GLU ASP CYS SEQRES 9 A 235 VAL TYR HIS ASP GLU GLN SER GLY LEU ASP ILE LEU THR SEQRES 10 A 235 ALA GLY VAL TYR ALA SER ASN PRO LEU GLU LEU LEU SER SEQRES 11 A 235 SER SER LYS PHE SER GLU LEU LEU ALA ASP LEU ARG THR SEQRES 12 A 235 ARG TYR GLN ARG ILE VAL ILE ASP THR PRO PRO CYS LEU SEQRES 13 A 235 ALA VAL SER ASP SER PHE MET LEU ALA GLN TYR VAL ASP SEQRES 14 A 235 SER VAL ILE LEU VAL ILE ASP ALA ASN HIS THR ARG THR SEQRES 15 A 235 PRO VAL VAL ARG GLU VAL VAL GLY LYS LEU THR GLN GLN SEQRES 16 A 235 GLY SER ARG ILE ASP GLY VAL ILE LEU ASN ARG LEU ASN SEQRES 17 A 235 ALA LYS LYS ALA SER ARG TYR SER GLY TYR TYR HIS TYR SEQRES 18 A 235 GLN ALA TYR TYR GLY GLU GLU THR LYS SER GLY ALA ALA SEQRES 19 A 235 LYS SEQRES 1 B 235 LYS LEU ASP ALA LYS ALA TYR PHE ASP GLU LYS LEU ARG SEQRES 2 B 235 GLU LEU THR ALA ALA VAL ALA THR ILE ALA THR SER TYR SEQRES 3 B 235 LEU LEU ALA HIS VAL ASN GLN ASP GLN HIS VAL VAL MET SEQRES 4 B 235 LEU THR SER CYS LEU PRO GLY GLU GLY LYS THR THR SER SEQRES 5 B 235 SER LEU ASN LEU ALA LEU SER LEU ALA GLN MET GLU LYS SEQRES 6 B 235 THR LEU LEU ILE ASP CYS ASP LEU ARG LYS PRO ALA ILE SEQRES 7 B 235 ALA HIS ARG PHE GLY ILE SER GLY SER GLN PRO GLY VAL SEQRES 8 B 235 THR ASN LEU LEU ASN GLY THR GLN SER LEU GLU ASP CYS SEQRES 9 B 235 VAL TYR HIS ASP GLU GLN SER GLY LEU ASP ILE LEU THR SEQRES 10 B 235 ALA GLY VAL TYR ALA SER ASN PRO LEU GLU LEU LEU SER SEQRES 11 B 235 SER SER LYS PHE SER GLU LEU LEU ALA ASP LEU ARG THR SEQRES 12 B 235 ARG TYR GLN ARG ILE VAL ILE ASP THR PRO PRO CYS LEU SEQRES 13 B 235 ALA VAL SER ASP SER PHE MET LEU ALA GLN TYR VAL ASP SEQRES 14 B 235 SER VAL ILE LEU VAL ILE ASP ALA ASN HIS THR ARG THR SEQRES 15 B 235 PRO VAL VAL ARG GLU VAL VAL GLY LYS LEU THR GLN GLN SEQRES 16 B 235 GLY SER ARG ILE ASP GLY VAL ILE LEU ASN ARG LEU ASN SEQRES 17 B 235 ALA LYS LYS ALA SER ARG TYR SER GLY TYR TYR HIS TYR SEQRES 18 B 235 GLN ALA TYR TYR GLY GLU GLU THR LYS SER GLY ALA ALA SEQRES 19 B 235 LYS HET PTR A 801 17 HET PTR B 801 17 HETNAM PTR O-PHOSPHOTYROSINE HETSYN PTR PHOSPHONOTYROSINE FORMUL 3 PTR 2(C9 H12 N O6 P) HELIX 1 AA1 ALA A 506 ALA A 522 1 17 HELIX 2 AA2 THR A 523 VAL A 533 1 11 HELIX 3 AA3 GLY A 550 GLN A 564 1 15 HELIX 4 AA4 ALA A 579 PHE A 584 1 6 HELIX 5 AA5 GLY A 592 ASN A 598 1 7 HELIX 6 AA6 ASN A 626 SER A 632 1 7 HELIX 7 AA7 SER A 633 THR A 645 1 13 HELIX 8 AA8 SER A 661 ALA A 667 1 7 HELIX 9 AA9 GLN A 668 VAL A 670 5 3 HELIX 10 AB1 ARG A 683 GLN A 696 1 14 HELIX 11 AB2 TYR B 509 ALA B 522 1 14 HELIX 12 AB3 THR B 523 VAL B 533 1 11 HELIX 13 AB4 GLY B 550 ALA B 563 1 14 HELIX 14 AB5 ALA B 579 PHE B 584 1 6 HELIX 15 AB6 GLY B 592 ASN B 598 1 7 HELIX 16 AB7 ASN B 626 SER B 632 1 7 HELIX 17 AB8 SER B 633 THR B 645 1 13 HELIX 18 AB9 SER B 661 GLN B 668 1 8 HELIX 19 AC1 ARG B 683 GLN B 696 1 14 SHEET 1 AA1 7 TYR A 608 HIS A 609 0 SHEET 2 AA1 7 ASP A 616 LEU A 618 -1 O ILE A 617 N TYR A 608 SHEET 3 AA1 7 THR A 568 ASP A 572 1 N LEU A 570 O LEU A 618 SHEET 4 AA1 7 ARG A 649 ASP A 653 1 O VAL A 651 N ILE A 571 SHEET 5 AA1 7 VAL A 539 THR A 543 1 N LEU A 542 O ILE A 652 SHEET 6 AA1 7 SER A 672 ASP A 678 1 O ILE A 674 N MET A 541 SHEET 7 AA1 7 ILE A 701 ASN A 707 1 O ILE A 705 N ILE A 677 SHEET 1 AA2 7 TYR B 608 HIS B 609 0 SHEET 2 AA2 7 ASP B 616 LEU B 618 -1 O ILE B 617 N TYR B 608 SHEET 3 AA2 7 THR B 568 ASP B 572 1 N LEU B 570 O ASP B 616 SHEET 4 AA2 7 ARG B 649 ASP B 653 1 O VAL B 651 N ILE B 571 SHEET 5 AA2 7 VAL B 539 SER B 544 1 N VAL B 540 O ILE B 650 SHEET 6 AA2 7 SER B 672 ASP B 678 1 O VAL B 676 N THR B 543 SHEET 7 AA2 7 ILE B 701 ASN B 707 1 O ASP B 702 N VAL B 673 SITE 1 AC1 8 ARG A 515 GLY A 548 GLU A 549 GLY A 550 SITE 2 AC1 8 LYS A 551 THR A 552 THR A 553 ARG A 583 SITE 1 AC2 8 GLY B 548 GLU B 549 GLY B 550 LYS B 551 SITE 2 AC2 8 THR B 552 THR B 553 ARG B 583 LEU B 709 CRYST1 171.430 171.430 44.390 90.00 90.00 120.00 P 64 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005833 0.003368 0.000000 0.00000 SCALE2 0.000000 0.006736 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022528 0.00000