HEADER VIRUS 20-AUG-19 6U2V TITLE AAV8 BACULOVIRUS-SF9 PRODUCED, FULL CAPSID COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ADENO-ASSOCIATED VIRUS - 8; SOURCE 3 ORGANISM_TAXID: 202813; SOURCE 4 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS ADENO-ASSOCIATED VIRUS, AAV, GENE THERAPY VECTOR, POST TRANSLATIONAL KEYWDS 2 MODIFICATION, CAPSID, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR N.K.PAULK,N.POWELEIT REVDAT 3 20-MAR-24 6U2V 1 JRNL REMARK REVDAT 2 14-OCT-20 6U2V 1 JRNL REVDAT 1 03-JUN-20 6U2V 0 JRNL AUTH N.G.RUMACHIK,S.A.MALAKER,N.POWELEIT,L.H.MAYNARD,C.M.ADAMS, JRNL AUTH 2 R.D.LEIB,G.CIROLIA,D.THOMAS,S.STAMNES,K.HOLT,P.SINN,A.P.MAY, JRNL AUTH 3 N.K.PAULK JRNL TITL METHODS MATTER: STANDARD PRODUCTION PLATFORMS FOR JRNL TITL 2 RECOMBINANT AAV PRODUCE CHEMICALLY AND FUNCTIONALLY DISTINCT JRNL TITL 3 VECTORS. JRNL REF MOL THER METHODS CLIN DEV V. 18 98 2020 JRNL REFN ESSN 2329-0501 JRNL PMID 32995354 JRNL DOI 10.1016/J.OMTM.2020.05.018 REMARK 2 REMARK 2 RESOLUTION. 3.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CISTEM, UCSF CHIMERA, PHENIX, REMARK 3 CISTEM, CISTEM, CISTEM, CISTEM REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.600 REMARK 3 NUMBER OF PARTICLES : 404 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6U2V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243787. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ADENO-ASSOCIATED VIRUS - 8 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : RECOMBINANT AAV8 VECTOR, REMARK 245 PRODUCED IN SUSPENSION SPODOPTERA FRUGIPERDA (SF9) CELLS REMARK 245 INFECTED WITH LIVE BACULOVIRUS EXPRESSING AAV COMPONENTS. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 395 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6600.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.499556 -0.312387 -0.807996 443.73647 REMARK 350 BIOMT2 2 -0.305195 0.809451 -0.501642 273.05403 REMARK 350 BIOMT3 2 0.810740 0.497195 0.309027 -169.28206 REMARK 350 BIOMT1 3 -0.310180 -0.810649 -0.496625 716.88822 REMARK 350 BIOMT2 3 -0.806204 0.501137 -0.314478 443.57057 REMARK 350 BIOMT3 3 0.503809 0.302836 -0.808991 273.92128 REMARK 350 BIOMT1 4 -0.310180 -0.806204 0.503809 441.96882 REMARK 350 BIOMT2 4 -0.810649 0.501137 0.302836 275.90155 REMARK 350 BIOMT3 4 -0.496625 -0.314478 -0.808991 717.11807 REMARK 350 BIOMT1 5 0.499556 -0.305195 0.810740 -1.09247 REMARK 350 BIOMT2 5 -0.312387 0.809451 0.497195 1.75986 REMARK 350 BIOMT3 5 -0.807996 -0.501642 0.309027 547.82541 REMARK 350 BIOMT1 6 0.305227 -0.807359 0.504983 273.41674 REMARK 350 BIOMT2 6 -0.807359 -0.500602 -0.312361 717.87218 REMARK 350 BIOMT3 6 0.504983 -0.312361 -0.804626 441.02360 REMARK 350 BIOMT1 7 0.808290 -0.497792 0.314436 102.92001 REMARK 350 BIOMT2 7 -0.503783 -0.308308 0.806938 275.80349 REMARK 350 BIOMT3 7 -0.304744 -0.810647 -0.499982 716.02018 REMARK 350 BIOMT1 8 0.810636 -0.499102 -0.306214 272.43555 REMARK 350 BIOMT2 8 0.496643 0.309020 0.811081 -168.52848 REMARK 350 BIOMT3 8 -0.310186 -0.809570 0.498378 444.08168 REMARK 350 BIOMT1 9 0.309022 -0.809479 -0.499248 547.69865 REMARK 350 BIOMT2 9 0.811365 0.498257 -0.305657 -1.07206 REMARK 350 BIOMT3 9 0.496177 -0.310618 0.810756 1.01786 REMARK 350 BIOMT1 10 -0.003338 -0.999992 0.002099 548.30505 REMARK 350 BIOMT2 10 0.005448 -0.002117 -0.999983 546.75368 REMARK 350 BIOMT3 10 0.999980 -0.003326 0.005455 -0.87213 REMARK 350 BIOMT1 11 -0.809921 0.499548 0.307374 274.68783 REMARK 350 BIOMT2 11 0.499548 0.312869 0.807814 -169.48558 REMARK 350 BIOMT3 11 0.307374 0.807814 -0.502948 105.58438 REMARK 350 BIOMT1 12 -0.307860 0.810194 0.498806 -0.33306 REMARK 350 BIOMT2 12 0.808994 0.498841 -0.310945 0.86399 REMARK 350 BIOMT3 12 -0.500751 0.307804 -0.809015 547.69467 REMARK 350 BIOMT1 13 0.003342 0.999988 -0.003533 -0.15390 REMARK 350 BIOMT2 13 -0.000202 -0.003532 -0.999994 548.69197 REMARK 350 BIOMT3 13 -0.999994 0.003342 0.000191 546.49193 REMARK 350 BIOMT1 14 -0.306387 0.806641 -0.505427 274.97772 REMARK 350 BIOMT2 14 -0.809758 -0.499987 -0.307090 716.91872 REMARK 350 BIOMT3 14 -0.500418 0.315186 0.806374 103.63832 REMARK 350 BIOMT1 15 -0.809011 0.497353 -0.313276 444.83925 REMARK 350 BIOMT2 15 -0.500895 -0.304441 0.810197 273.06058 REMARK 350 BIOMT3 15 0.307580 0.812377 0.495417 -168.85754 REMARK 350 BIOMT1 16 -0.495306 0.307811 -0.812357 547.41296 REMARK 350 BIOMT2 16 0.307811 -0.812268 -0.495453 547.96480 REMARK 350 BIOMT3 16 -0.812357 -0.495453 0.307574 547.72119 REMARK 350 BIOMT1 17 -0.999986 -0.000015 -0.005245 549.19412 REMARK 350 BIOMT2 17 -0.000015 -0.999984 0.005649 546.62988 REMARK 350 BIOMT3 17 -0.005245 0.005649 0.999970 -0.10361 REMARK 350 BIOMT1 18 -0.503797 0.309763 0.806372 106.34766 REMARK 350 BIOMT2 18 0.309763 -0.806625 0.503391 272.61734 REMARK 350 BIOMT3 18 0.806372 0.503391 0.310422 -170.16571 REMARK 350 BIOMT1 19 0.307545 0.809042 0.500867 -169.12765 REMARK 350 BIOMT2 19 0.809042 -0.499406 0.309911 104.60318 REMARK 350 BIOMT3 19 0.500867 0.309911 -0.808139 272.55493 REMARK 350 BIOMT1 20 0.312793 0.807835 -0.499563 103.46570 REMARK 350 BIOMT2 20 0.807835 -0.502894 -0.307409 274.77727 REMARK 350 BIOMT3 20 -0.499563 -0.307409 -0.809899 716.23344 REMARK 350 BIOMT1 21 -0.499996 -0.309051 -0.809006 716.85494 REMARK 350 BIOMT2 21 0.313546 0.806183 -0.501755 104.52054 REMARK 350 BIOMT3 21 0.807275 -0.504536 -0.306187 274.54083 REMARK 350 BIOMT1 22 -0.811349 -0.496203 0.309023 547.55112 REMARK 350 BIOMT2 22 -0.496203 0.305148 -0.812814 548.72186 REMARK 350 BIOMT3 22 0.309023 -0.812814 -0.493799 546.82445 REMARK 350 BIOMT1 23 -0.003338 0.005448 0.999980 -0.27634 REMARK 350 BIOMT2 23 -0.999992 -0.002117 -0.003326 549.45537 REMARK 350 BIOMT3 23 0.002099 -0.999983 0.005455 545.59828 REMARK 350 BIOMT1 24 0.807394 0.502637 0.308985 -169.54852 REMARK 350 BIOMT2 24 -0.501603 0.309018 0.808024 105.70738 REMARK 350 BIOMT3 24 0.310661 -0.807381 0.501623 272.55685 REMARK 350 BIOMT1 25 0.500442 0.308266 -0.809030 273.66299 REMARK 350 BIOMT2 25 0.310209 0.808574 0.499978 -169.27747 REMARK 350 BIOMT3 25 0.808287 -0.501178 0.309018 105.03413 REMARK 350 BIOMT1 26 -0.311632 0.811090 0.494993 1.49768 REMARK 350 BIOMT2 26 -0.808554 -0.499991 0.310240 547.69956 REMARK 350 BIOMT3 26 0.499125 -0.303548 0.811624 -1.96476 REMARK 350 BIOMT1 27 -0.001908 0.999996 -0.002113 0.89308 REMARK 350 BIOMT2 27 0.000201 0.002113 0.999998 -0.12812 REMARK 350 BIOMT3 27 0.999998 0.001907 -0.000205 -0.76314 REMARK 350 BIOMT1 28 -0.307860 0.808994 -0.500751 273.45714 REMARK 350 BIOMT2 28 0.810194 0.498841 0.307804 -168.74350 REMARK 350 BIOMT3 28 0.498806 -0.310945 -0.809015 443.52805 REMARK 350 BIOMT1 29 -0.806673 0.502042 -0.311821 442.51560 REMARK 350 BIOMT2 29 0.502042 0.303731 -0.809754 274.87415 REMARK 350 BIOMT3 29 -0.311821 -0.809754 -0.497058 716.91348 REMARK 350 BIOMT1 30 -0.809005 0.503338 0.303583 274.43541 REMARK 350 BIOMT2 30 -0.498400 -0.313581 -0.808248 717.66031 REMARK 350 BIOMT3 30 -0.311624 -0.805182 0.504552 441.58379 REMARK 350 BIOMT1 31 0.001904 -0.999992 0.003547 546.47330 REMARK 350 BIOMT2 31 -0.005447 0.003536 0.999979 1.03387 REMARK 350 BIOMT3 31 -0.999983 -0.001923 -0.005440 549.47252 REMARK 350 BIOMT1 32 0.309019 -0.808276 0.501195 273.66593 REMARK 350 BIOMT2 32 0.806923 0.501748 0.311647 -169.69600 REMARK 350 BIOMT3 32 -0.503371 0.308121 0.807267 106.13921 REMARK 350 BIOMT1 33 0.807394 -0.501603 0.310661 105.24267 REMARK 350 BIOMT2 33 0.502637 0.309018 -0.807381 272.61317 REMARK 350 BIOMT3 33 0.308985 0.808024 0.501623 -169.74695 REMARK 350 BIOMT1 34 0.808290 -0.503783 -0.304744 273.95874 REMARK 350 BIOMT2 34 -0.497792 -0.308308 -0.810647 716.70515 REMARK 350 BIOMT3 34 0.314436 0.806938 -0.499982 103.07933 REMARK 350 BIOMT1 35 0.310470 -0.811805 -0.494551 546.65427 REMARK 350 BIOMT2 35 -0.811805 -0.497106 0.306363 548.85991 REMARK 350 BIOMT3 35 -0.494551 0.306363 -0.813364 547.58141 REMARK 350 BIOMT1 36 0.809724 0.497953 0.310467 -169.30839 REMARK 350 BIOMT2 36 0.500455 -0.309728 -0.808464 443.09743 REMARK 350 BIOMT3 36 -0.306417 0.810007 -0.499997 272.28059 REMARK 350 BIOMT1 37 0.504237 0.304483 -0.808106 273.40740 REMARK 350 BIOMT2 37 -0.310921 -0.809009 -0.498831 717.45366 REMARK 350 BIOMT3 37 -0.805650 0.502787 -0.313262 442.12865 REMARK 350 BIOMT1 38 -0.496196 -0.312839 -0.809890 717.09406 REMARK 350 BIOMT2 38 -0.312839 -0.805742 0.502904 443.02635 REMARK 350 BIOMT3 38 -0.809890 0.502904 0.301938 274.94980 REMARK 350 BIOMT1 39 -0.809011 -0.500895 0.307580 548.59171 REMARK 350 BIOMT2 39 0.497353 -0.304441 0.812377 -0.93528 REMARK 350 BIOMT3 39 -0.313276 0.810197 0.495417 1.77952 REMARK 350 BIOMT1 40 -0.001908 0.000201 0.999998 0.76487 REMARK 350 BIOMT2 40 0.999996 0.002113 0.001907 -0.89135 REMARK 350 BIOMT3 40 -0.002113 0.999998 -0.000205 0.12985 REMARK 350 BIOMT1 41 -0.499996 0.313546 0.807275 104.02278 REMARK 350 BIOMT2 41 -0.309051 0.806183 -0.504536 275.79776 REMARK 350 BIOMT3 41 -0.809006 -0.501755 -0.306187 716.44474 REMARK 350 BIOMT1 42 0.309022 0.811365 0.496177 -168.88597 REMARK 350 BIOMT2 42 -0.809479 0.498257 -0.310618 444.20103 REMARK 350 BIOMT3 42 -0.499248 -0.305657 0.810756 272.28472 REMARK 350 BIOMT1 43 0.309019 0.806923 -0.503371 105.79093 REMARK 350 BIOMT2 43 -0.808276 0.501748 0.308121 273.63862 REMARK 350 BIOMT3 43 0.501195 0.311647 0.807267 -169.95734 REMARK 350 BIOMT1 44 -0.500000 0.306358 -0.810028 548.45933 REMARK 350 BIOMT2 44 -0.307104 0.811832 0.496604 -0.17802 REMARK 350 BIOMT3 44 0.809745 0.497065 -0.311832 0.88206 REMARK 350 BIOMT1 45 -0.999999 0.001434 -0.000004 547.36656 REMARK 350 BIOMT2 45 0.001434 0.999983 -0.005645 1.15640 REMARK 350 BIOMT3 45 -0.000004 -0.005645 -0.999984 548.70867 REMARK 350 BIOMT1 46 0.001904 -0.005447 -0.999983 548.42859 REMARK 350 BIOMT2 46 -0.999992 0.003536 -0.001923 547.52194 REMARK 350 BIOMT3 46 0.003547 0.999979 -0.005440 0.01719 REMARK 350 BIOMT1 47 -0.808113 -0.502190 -0.307828 717.06538 REMARK 350 BIOMT2 47 -0.502190 0.314291 0.805622 105.08018 REMARK 350 BIOMT3 47 -0.307828 0.805622 -0.506178 275.56009 REMARK 350 BIOMT1 48 -0.500000 -0.307104 0.809745 273.46069 REMARK 350 BIOMT2 48 0.306358 0.811832 0.497065 -168.31874 REMARK 350 BIOMT3 48 -0.810028 0.496604 -0.311832 444.63075 REMARK 350 BIOMT1 49 0.500442 0.310209 0.808287 -169.33887 REMARK 350 BIOMT2 49 0.308266 0.808574 -0.501178 105.15320 REMARK 350 BIOMT3 49 -0.809030 0.499978 0.309018 273.57926 REMARK 350 BIOMT1 50 0.810636 0.496643 -0.310186 0.60064 REMARK 350 BIOMT2 50 -0.499102 0.309020 -0.809570 547.56707 REMARK 350 BIOMT3 50 -0.306214 0.811081 0.498378 -1.20703 REMARK 350 BIOMT1 51 0.809724 0.500455 -0.306417 -1.22593 REMARK 350 BIOMT2 51 0.497953 -0.309728 0.810007 0.99774 REMARK 350 BIOMT3 51 0.310467 -0.808464 -0.499997 546.93225 REMARK 350 BIOMT1 52 0.003342 -0.000202 -0.999994 546.60042 REMARK 350 BIOMT2 52 0.999988 -0.003532 0.003342 0.26543 REMARK 350 BIOMT3 52 -0.003533 -0.999994 0.000191 548.58385 REMARK 350 BIOMT1 53 -0.809005 -0.498400 -0.311624 717.30906 REMARK 350 BIOMT2 53 0.503338 -0.313581 -0.805182 442.46641 REMARK 350 BIOMT3 53 0.303583 -0.808248 0.504552 273.93165 REMARK 350 BIOMT1 54 -0.504679 -0.305645 0.807391 274.98645 REMARK 350 BIOMT2 54 -0.305645 -0.811397 -0.498213 716.49395 REMARK 350 BIOMT3 54 0.807391 -0.498213 0.316077 102.53565 REMARK 350 BIOMT1 55 0.495750 0.311681 0.810609 -169.09259 REMARK 350 BIOMT2 55 -0.308973 -0.809016 0.500029 443.65131 REMARK 350 BIOMT3 55 0.811645 -0.498346 -0.304768 271.25929 REMARK 350 BIOMT1 56 -0.311632 -0.808554 0.499125 444.29209 REMARK 350 BIOMT2 56 0.811090 -0.499991 -0.303548 272.03396 REMARK 350 BIOMT3 56 0.494993 0.310240 0.811624 -169.06500 REMARK 350 BIOMT1 57 0.495750 -0.308973 0.811645 0.73770 REMARK 350 BIOMT2 57 0.311681 -0.809016 -0.498346 546.80476 REMARK 350 BIOMT3 57 0.810609 0.500029 -0.304768 -2.09949 REMARK 350 BIOMT1 58 0.999985 -0.001419 0.005249 -1.04314 REMARK 350 BIOMT2 58 -0.001419 -0.999999 -0.000004 548.56511 REMARK 350 BIOMT3 58 0.005249 -0.000004 -0.999986 545.72412 REMARK 350 BIOMT1 59 0.504237 -0.310922 -0.805650 441.41062 REMARK 350 BIOMT2 59 0.304483 -0.809009 0.502787 274.88227 REMARK 350 BIOMT3 59 -0.808106 -0.498831 -0.313262 717.33221 REMARK 350 BIOMT1 60 -0.306387 -0.809758 -0.500418 716.64293 REMARK 350 BIOMT2 60 0.806641 -0.499987 0.315186 103.97661 REMARK 350 BIOMT3 60 -0.505427 -0.307090 0.806374 275.56824 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 565 OH TYR A 615 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 254 16.03 58.21 REMARK 500 PHE A 287 32.64 -141.99 REMARK 500 HIS A 291 2.56 -67.26 REMARK 500 TYR A 380 -178.20 -170.17 REMARK 500 SER A 430 31.98 -93.19 REMARK 500 ASP A 434 6.55 -67.15 REMARK 500 GLN A 443 -179.08 -69.38 REMARK 500 ALA A 458 33.70 -95.35 REMARK 500 ASN A 540 45.64 -140.30 REMARK 500 ILE A 620 -53.67 -122.10 REMARK 500 HIS A 626 79.97 -100.04 REMARK 500 THR A 627 -169.90 -110.95 REMARK 500 HIS A 632 71.63 50.72 REMARK 500 ALA A 658 -166.69 -78.01 REMARK 500 ASN A 670 13.92 -141.23 REMARK 500 ASN A 693 43.29 -140.40 REMARK 500 ALA A 716 -169.67 -125.30 REMARK 500 THR A 731 -38.60 -130.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-20615 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-20502 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-20626 RELATED DB: EMDB REMARK 900 AAV8 BACULOVIRUS-SF9 PRODUCED, FULL CAPSID DBREF 6U2V A 220 738 UNP Q8JQF8 Q8JQF8_9VIRU 220 738 SEQRES 1 A 519 ASP GLY VAL GLY SER SER SER GLY ASN TRP HIS CYS ASP SEQRES 2 A 519 SER THR TRP LEU GLY ASP ARG VAL ILE THR THR SER THR SEQRES 3 A 519 ARG THR TRP ALA LEU PRO THR TYR ASN ASN HIS LEU TYR SEQRES 4 A 519 LYS GLN ILE SER ASN GLY THR SER GLY GLY ALA THR ASN SEQRES 5 A 519 ASP ASN THR TYR PHE GLY TYR SER THR PRO TRP GLY TYR SEQRES 6 A 519 PHE ASP PHE ASN ARG PHE HIS CYS HIS PHE SER PRO ARG SEQRES 7 A 519 ASP TRP GLN ARG LEU ILE ASN ASN ASN TRP GLY PHE ARG SEQRES 8 A 519 PRO LYS ARG LEU SER PHE LYS LEU PHE ASN ILE GLN VAL SEQRES 9 A 519 LYS GLU VAL THR GLN ASN GLU GLY THR LYS THR ILE ALA SEQRES 10 A 519 ASN ASN LEU THR SER THR ILE GLN VAL PHE THR ASP SER SEQRES 11 A 519 GLU TYR GLN LEU PRO TYR VAL LEU GLY SER ALA HIS GLN SEQRES 12 A 519 GLY CYS LEU PRO PRO PHE PRO ALA ASP VAL PHE MET ILE SEQRES 13 A 519 PRO GLN TYR GLY TYR LEU THR LEU ASN ASN GLY SER GLN SEQRES 14 A 519 ALA VAL GLY ARG SER SER PHE TYR CYS LEU GLU TYR PHE SEQRES 15 A 519 PRO SER GLN MET LEU ARG THR GLY ASN ASN PHE GLN PHE SEQRES 16 A 519 THR TYR THR PHE GLU ASP VAL PRO PHE HIS SER SER TYR SEQRES 17 A 519 ALA HIS SER GLN SER LEU ASP ARG LEU MET ASN PRO LEU SEQRES 18 A 519 ILE ASP GLN TYR LEU TYR TYR LEU SER ARG THR GLN THR SEQRES 19 A 519 THR GLY GLY THR ALA ASN THR GLN THR LEU GLY PHE SER SEQRES 20 A 519 GLN GLY GLY PRO ASN THR MET ALA ASN GLN ALA LYS ASN SEQRES 21 A 519 TRP LEU PRO GLY PRO CYS TYR ARG GLN GLN ARG VAL SER SEQRES 22 A 519 THR THR THR GLY GLN ASN ASN ASN SER ASN PHE ALA TRP SEQRES 23 A 519 THR ALA GLY THR LYS TYR HIS LEU ASN GLY ARG ASN SER SEQRES 24 A 519 LEU ALA ASN PRO GLY ILE ALA MET ALA THR HIS LYS ASP SEQRES 25 A 519 ASP GLU GLU ARG PHE PHE PRO SER ASN GLY ILE LEU ILE SEQRES 26 A 519 PHE GLY LYS GLN ASN ALA ALA ARG ASP ASN ALA ASP TYR SEQRES 27 A 519 SER ASP VAL MET LEU THR SER GLU GLU GLU ILE LYS THR SEQRES 28 A 519 THR ASN PRO VAL ALA THR GLU GLU TYR GLY ILE VAL ALA SEQRES 29 A 519 ASP ASN LEU GLN GLN GLN ASN THR ALA PRO GLN ILE GLY SEQRES 30 A 519 THR VAL ASN SER GLN GLY ALA LEU PRO GLY MET VAL TRP SEQRES 31 A 519 GLN ASN ARG ASP VAL TYR LEU GLN GLY PRO ILE TRP ALA SEQRES 32 A 519 LYS ILE PRO HIS THR ASP GLY ASN PHE HIS PRO SER PRO SEQRES 33 A 519 LEU MET GLY GLY PHE GLY LEU LYS HIS PRO PRO PRO GLN SEQRES 34 A 519 ILE LEU ILE LYS ASN THR PRO VAL PRO ALA ASP PRO PRO SEQRES 35 A 519 THR THR PHE ASN GLN SER LYS LEU ASN SER PHE ILE THR SEQRES 36 A 519 GLN TYR SER THR GLY GLN VAL SER VAL GLU ILE GLU TRP SEQRES 37 A 519 GLU LEU GLN LYS GLU ASN SER LYS ARG TRP ASN PRO GLU SEQRES 38 A 519 ILE GLN TYR THR SER ASN TYR TYR LYS SER THR SER VAL SEQRES 39 A 519 ASP PHE ALA VAL ASN THR GLU GLY VAL TYR SER GLU PRO SEQRES 40 A 519 ARG PRO ILE GLY THR ARG TYR LEU THR ARG ASN LEU HELIX 1 AA1 THR A 270 THR A 274 5 5 HELIX 2 AA2 ARG A 289 HIS A 293 5 5 HELIX 3 AA3 SER A 295 ASN A 304 1 10 HELIX 4 AA4 CYS A 397 PHE A 401 5 5 HELIX 5 AA5 SER A 432 LEU A 436 5 5 HELIX 6 AA6 THR A 472 GLN A 476 5 5 HELIX 7 AA7 THR A 494 ASN A 498 5 5 HELIX 8 AA8 ASP A 556 SER A 558 5 3 HELIX 9 AA9 GLU A 565 THR A 571 5 7 SHEET 1 AA1 5 SER A 233 TRP A 235 0 SHEET 2 AA1 5 ARG A 239 LEU A 250 -1 O ILE A 241 N THR A 234 SHEET 3 AA1 5 GLN A 675 LYS A 691 -1 O TRP A 687 N VAL A 240 SHEET 4 AA1 5 ASN A 306 ASN A 329 -1 N ARG A 310 O GLU A 688 SHEET 5 AA1 5 THR A 332 ASN A 337 -1 O THR A 334 N THR A 327 SHEET 1 AA2 5 SER A 233 TRP A 235 0 SHEET 2 AA2 5 ARG A 239 LEU A 250 -1 O ILE A 241 N THR A 234 SHEET 3 AA2 5 GLN A 675 LYS A 691 -1 O TRP A 687 N VAL A 240 SHEET 4 AA2 5 ASN A 306 ASN A 329 -1 N ARG A 310 O GLU A 688 SHEET 5 AA2 5 PHE A 412 THR A 417 -1 O TYR A 416 N LEU A 314 SHEET 1 AA3 3 LYS A 259 ASN A 263 0 SHEET 2 AA3 3 TYR A 275 SER A 279 -1 O GLY A 277 N ILE A 261 SHEET 3 AA3 3 GLY A 379 LEU A 381 -1 O TYR A 380 N TYR A 278 SHEET 1 AA4 4 GLY A 283 TYR A 284 0 SHEET 2 AA4 4 ILE A 649 ASN A 653 -1 O ILE A 651 N GLY A 283 SHEET 3 AA4 4 ILE A 343 THR A 347 -1 N GLN A 344 O LYS A 652 SHEET 4 AA4 4 GLN A 404 LEU A 406 -1 O LEU A 406 N ILE A 343 SHEET 1 AA5 2 ALA A 428 HIS A 429 0 SHEET 2 AA5 2 THR A 735 ARG A 736 1 O ARG A 736 N ALA A 428 SHEET 1 AA6 2 TYR A 446 GLN A 452 0 SHEET 2 AA6 2 GLN A 461 GLN A 467 -1 O THR A 462 N THR A 451 SHEET 1 AA7 2 ARG A 490 SER A 492 0 SHEET 2 AA7 2 PHE A 536 PRO A 538 -1 O PHE A 537 N VAL A 491 SHEET 1 AA8 2 LYS A 510 LEU A 513 0 SHEET 2 AA8 2 ARG A 516 LEU A 519 -1 O ARG A 516 N LEU A 513 SHEET 1 AA9 2 ILE A 544 GLY A 546 0 SHEET 2 AA9 2 VAL A 560 LEU A 562 -1 O MET A 561 N PHE A 545 SHEET 1 AB1 2 GLY A 580 ALA A 583 0 SHEET 2 AB1 2 ILE A 595 VAL A 598 -1 O GLY A 596 N VAL A 582 SHEET 1 AB2 2 TRP A 621 LYS A 623 0 SHEET 2 AB2 2 PHE A 640 LEU A 642 1 O LEU A 642 N ALA A 622 CISPEP 1 ASN A 521 PRO A 522 0 -0.57 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000