HEADER HYDROLASE 21-AUG-19 6U2Z TITLE CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE L1 FROM TITLE 2 STENOTROPHOMONAS MALTOPHILIA IN THE COMPLEX WITH THE HYDROLYZED TITLE 3 MOXALACTAM AND TWO COPPER IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE METALLO-BETA-LACTAMASE L1 (BETA-LACTAMASE TYPE II) COMPND 3 (EC 3.5.2.6) (PENICILLINASE); COMPND 4 CHAIN: A; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STENOTROPHOMONAS MALTOPHILIA (STRAIN K279A); SOURCE 3 ORGANISM_TAXID: 522373; SOURCE 4 STRAIN: K279A; SOURCE 5 GENE: SMLT2667; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21DE3; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: GOLD; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS LACTAM ANTIBIOTICS, MOXALACTAM, STRUCTURAL GENOMICS, CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK,CENTER FOR STRUCTURAL GENOMICS AUTHOR 2 OF INFECTIOUS DISEASES (CSGID) REVDAT 4 29-NOV-23 6U2Z 1 REMARK REVDAT 3 11-OCT-23 6U2Z 1 COMPND HETNAM REVDAT 2 18-DEC-19 6U2Z 1 REMARK REVDAT 1 04-SEP-19 6U2Z 0 JRNL AUTH Y.KIM,N.MALTSEVA,M.ENDRES,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE L1 FROM JRNL TITL 2 STENOTROPHOMONAS MALTOPHILIA IN THE COMPLEX WITH THE JRNL TITL 3 HYDROLYZED MOXALACTAM AND TWO COPPER IONS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 13167 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 648 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3400 - 4.0700 0.99 2645 151 0.1523 0.2005 REMARK 3 2 4.0700 - 3.2300 1.00 2530 116 0.1846 0.2174 REMARK 3 3 3.2300 - 2.8200 1.00 2458 131 0.2155 0.2575 REMARK 3 4 2.8200 - 2.5600 1.00 2468 127 0.2267 0.2895 REMARK 3 5 2.5600 - 2.3800 0.99 2418 123 0.2268 0.2564 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2091 REMARK 3 ANGLE : 0.551 2858 REMARK 3 CHIRALITY : 0.041 317 REMARK 3 PLANARITY : 0.004 377 REMARK 3 DIHEDRAL : 14.651 1241 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 23 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7074 19.3253 7.8085 REMARK 3 T TENSOR REMARK 3 T11: 0.3312 T22: 0.2685 REMARK 3 T33: 0.3235 T12: 0.0284 REMARK 3 T13: 0.0109 T23: 0.0236 REMARK 3 L TENSOR REMARK 3 L11: 0.9768 L22: 0.7366 REMARK 3 L33: 0.9480 L12: -0.3226 REMARK 3 L13: -0.5814 L23: 0.3426 REMARK 3 S TENSOR REMARK 3 S11: 0.0061 S12: 0.2246 S13: -0.4207 REMARK 3 S21: -0.1917 S22: -0.1443 S23: 0.0279 REMARK 3 S31: 0.0847 S32: -0.0218 S33: 0.1481 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.4586 25.9623 9.9898 REMARK 3 T TENSOR REMARK 3 T11: 0.3122 T22: 0.3055 REMARK 3 T33: 0.2718 T12: 0.0261 REMARK 3 T13: 0.0121 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 0.8319 L22: 1.3707 REMARK 3 L33: 0.8869 L12: -0.5264 REMARK 3 L13: -0.3205 L23: 0.2667 REMARK 3 S TENSOR REMARK 3 S11: -0.1129 S12: -0.1098 S13: 0.0146 REMARK 3 S21: 0.1948 S22: 0.0224 S23: -0.0682 REMARK 3 S31: 0.0899 S32: 0.0492 S33: 0.0796 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.9754 33.9842 0.9724 REMARK 3 T TENSOR REMARK 3 T11: 0.2576 T22: 0.2510 REMARK 3 T33: 0.2650 T12: 0.0044 REMARK 3 T13: -0.0112 T23: -0.0264 REMARK 3 L TENSOR REMARK 3 L11: 1.1223 L22: 1.3669 REMARK 3 L33: 0.8222 L12: 0.1570 REMARK 3 L13: 0.0470 L23: -0.3522 REMARK 3 S TENSOR REMARK 3 S11: 0.0075 S12: 0.1092 S13: 0.0178 REMARK 3 S21: 0.1157 S22: -0.0712 S23: -0.0502 REMARK 3 S31: -0.0502 S32: -0.0226 S33: 0.0804 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3783 36.4047 -8.5493 REMARK 3 T TENSOR REMARK 3 T11: 0.2917 T22: 0.3209 REMARK 3 T33: 0.3158 T12: -0.0015 REMARK 3 T13: -0.0436 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 1.6001 L22: 1.0943 REMARK 3 L33: 1.1551 L12: -0.1753 REMARK 3 L13: -0.4893 L23: 0.0794 REMARK 3 S TENSOR REMARK 3 S11: 0.0623 S12: -0.0409 S13: 0.1759 REMARK 3 S21: -0.1318 S22: 0.0095 S23: 0.0190 REMARK 3 S31: 0.1461 S32: -0.0227 S33: -0.0629 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 236 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.0037 24.4723 -7.7872 REMARK 3 T TENSOR REMARK 3 T11: 0.2877 T22: 0.3096 REMARK 3 T33: 0.3272 T12: -0.0056 REMARK 3 T13: -0.0148 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 1.5157 L22: 2.2045 REMARK 3 L33: 1.4518 L12: -0.2670 REMARK 3 L13: 0.2224 L23: -0.1422 REMARK 3 S TENSOR REMARK 3 S11: 0.1778 S12: 0.3466 S13: -0.0722 REMARK 3 S21: -0.0615 S22: 0.1313 S23: -0.0825 REMARK 3 S31: 0.1783 S32: -0.1110 S33: -0.3700 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1095 14.0437 -7.1593 REMARK 3 T TENSOR REMARK 3 T11: 0.3490 T22: 0.2608 REMARK 3 T33: 0.4159 T12: -0.0321 REMARK 3 T13: 0.0380 T23: -0.0657 REMARK 3 L TENSOR REMARK 3 L11: 1.6864 L22: 1.4753 REMARK 3 L33: 2.1049 L12: 0.0078 REMARK 3 L13: -0.3477 L23: -0.0069 REMARK 3 S TENSOR REMARK 3 S11: 0.0423 S12: 0.0439 S13: -0.3990 REMARK 3 S21: 0.0669 S22: -0.1178 S23: -0.2265 REMARK 3 S31: 0.7369 S32: -0.1307 S33: 0.0812 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 267 THROUGH 288 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9235 27.9660 -14.4085 REMARK 3 T TENSOR REMARK 3 T11: 0.5034 T22: 0.4295 REMARK 3 T33: 0.4010 T12: -0.0090 REMARK 3 T13: -0.0338 T23: -0.0505 REMARK 3 L TENSOR REMARK 3 L11: 3.0317 L22: 1.0800 REMARK 3 L33: 0.5427 L12: -1.0581 REMARK 3 L13: -0.6109 L23: -0.1455 REMARK 3 S TENSOR REMARK 3 S11: 0.4002 S12: 0.3593 S13: -0.1627 REMARK 3 S21: -0.2846 S22: -0.2361 S23: 0.0363 REMARK 3 S31: 0.4394 S32: -0.1357 S33: -0.1508 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6U2Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243827. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-APR-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97911 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13193 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.18100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.66700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: PDBID 6U0Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM MALONATE PH 7.0, 20% W/V REMARK 280 POLYETHYLENE GLYCOL 3,350, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 32.93100 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.86200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 32.93100 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 65.86200 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 32.93100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 65.86200 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 32.93100 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 65.86200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 52.11700 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 90.26929 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 32.93100 REMARK 350 BIOMT1 4 0.500000 -0.866025 0.000000 52.11700 REMARK 350 BIOMT2 4 -0.866025 -0.500000 0.000000 90.26929 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 32.93100 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 17 REMARK 465 ASN A 18 REMARK 465 ALA A 19 REMARK 465 SER A 20 REMARK 465 ALA A 21 REMARK 465 ALA A 22 REMARK 465 THR A 289 REMARK 465 ARG A 290 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 23 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 74 156.75 65.58 REMARK 500 ALA A 106 54.32 -94.41 REMARK 500 HIS A 110 -30.45 -134.78 REMARK 500 ASP A 192 -167.02 -105.11 REMARK 500 TYR A 220 73.56 -152.04 REMARK 500 CYS A 239 88.96 -152.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 302 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 105 NE2 REMARK 620 2 HIS A 107 ND1 97.3 REMARK 620 3 HIS A 181 NE2 107.0 111.1 REMARK 620 4 HOH A 416 O 114.2 107.6 117.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 301 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 109 OD2 REMARK 620 2 HIS A 110 NE2 87.1 REMARK 620 3 HIS A 246 NE2 86.6 94.3 REMARK 620 4 3P7 A 300 N8 99.2 173.7 85.8 REMARK 620 5 3P7 A 300 O82 163.8 109.1 93.1 64.7 REMARK 620 6 HOH A 416 O 84.8 107.3 156.2 73.8 89.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3P7 A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6U0Y RELATED DB: PDB REMARK 900 THE SAME PROTEIN, THE APO FORM REMARK 900 RELATED ID: 6U0Z RELATED DB: PDB REMARK 900 THE SAME PROTEIN, IN THE COMPLEX WITH THE HYDROLYZED PENICILLIN G REMARK 900 RELATED ID: 6U10 RELATED DB: PDB REMARK 900 THE SAME PROTEIN, IN THE COMPLEX WITH THE INHIBITOR CAPTOPRIL REMARK 900 RELATED ID: 6U13 RELATED DB: PDB REMARK 900 THE SAME PROTEIN, IN THE COMPLEX WITH THE HYDROLYZED MOXALACTAM REMARK 900 RELATED ID: 6U2Y RELATED DB: PDB REMARK 900 THE SAME PROTEIN, IN THE COMPLEX WITH THE HYDROLYZED MOXALACTAM AND REMARK 900 TWO NI IONS REMARK 900 RELATED ID: CSGID-IDP97218 RELATED DB: TARGETTRACK DBREF 6U2Z A 19 290 UNP B2FTM1 B2FTM1_STRMK 19 290 SEQADV 6U2Z SER A 17 UNP B2FTM1 EXPRESSION TAG SEQADV 6U2Z ASN A 18 UNP B2FTM1 EXPRESSION TAG SEQRES 1 A 274 SER ASN ALA SER ALA ALA GLU ALA PRO LEU PRO GLN LEU SEQRES 2 A 274 ARG ALA TYR THR VAL ASP ALA SER TRP LEU GLN PRO MET SEQRES 3 A 274 ALA PRO LEU GLN VAL ALA ASP HIS THR TRP GLN ILE GLY SEQRES 4 A 274 THR GLU ASP LEU THR ALA LEU LEU VAL GLN THR ALA GLU SEQRES 5 A 274 GLY ALA VAL LEU LEU ASP GLY GLY MET PRO GLN MET ALA SEQRES 6 A 274 GLY HIS LEU LEU ASP ASN MET LYS LEU ARG GLY VAL ALA SEQRES 7 A 274 PRO GLN ASP LEU ARG LEU ILE LEU LEU SER HIS ALA HIS SEQRES 8 A 274 ALA ASP HIS ALA GLY PRO VAL ALA GLU LEU LYS ARG ARG SEQRES 9 A 274 THR GLY ALA HIS VAL ALA ALA ASN ALA GLU THR ALA VAL SEQRES 10 A 274 LEU LEU ALA ARG GLY GLY SER ASN ASP LEU HIS PHE GLY SEQRES 11 A 274 ASP GLY ILE THR TYR PRO PRO ALA SER ALA ASP ARG ILE SEQRES 12 A 274 ILE MET ASP GLY GLU VAL VAL THR VAL GLY GLY ILE ALA SEQRES 13 A 274 PHE THR ALA HIS PHE MET PRO GLY HIS THR PRO GLY SER SEQRES 14 A 274 THR ALA TRP THR TRP THR ASP THR ARG ASP GLY LYS PRO SEQRES 15 A 274 VAL ARG ILE ALA TYR ALA ASP SER LEU SER ALA PRO GLY SEQRES 16 A 274 TYR GLN LEU LYS GLY ASN PRO ARG TYR PRO ARG LEU ILE SEQRES 17 A 274 GLU ASP TYR LYS ARG SER PHE ALA THR VAL ARG ALA LEU SEQRES 18 A 274 PRO CYS ASP LEU LEU LEU THR PRO HIS PRO GLY ALA SER SEQRES 19 A 274 ASN TRP ASN TYR ALA VAL GLY SER LYS ALA SER ALA GLU SEQRES 20 A 274 ALA LEU THR CYS ASN ALA TYR ALA ASP ALA ALA GLU LYS SEQRES 21 A 274 LYS PHE ASP ALA GLN LEU ALA ARG GLU THR ALA GLY THR SEQRES 22 A 274 ARG HET 3P7 A 300 29 HET CU A 301 1 HET CU A 302 1 HET EDO A 303 4 HETNAM 3P7 (2R)-2-[(1R)-1-{[(2R)-2-CARBOXY-2-(4-HYDROXYPHENYL) HETNAM 2 3P7 ACETYL]AMINO}-1-METHOXY-2-OXOETHYL]-5-METHYLIDENE-5,6- HETNAM 3 3P7 DIHYDRO-2H-1,3 -OXAZINE-4-CARBOXYLIC ACID HETNAM CU COPPER (II) ION HETNAM EDO 1,2-ETHANEDIOL HETSYN 3P7 MOXALACTAM DERIVATIVE (OPEN FORM) HETSYN EDO ETHYLENE GLYCOL FORMUL 2 3P7 C18 H18 N2 O9 FORMUL 3 CU 2(CU 2+) FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *61(H2 O) HELIX 1 AA1 ASP A 35 GLN A 40 5 6 HELIX 2 AA2 MET A 77 GLN A 79 5 3 HELIX 3 AA3 MET A 80 ARG A 91 1 12 HELIX 4 AA4 ALA A 94 GLN A 96 5 3 HELIX 5 AA5 HIS A 107 GLY A 112 1 6 HELIX 6 AA6 PRO A 113 GLY A 122 1 10 HELIX 7 AA7 ASN A 128 ARG A 137 1 10 HELIX 8 AA8 ARG A 222 ALA A 236 1 15 HELIX 9 AA9 HIS A 246 ASN A 251 5 6 HELIX 10 AB1 ASN A 253 ALA A 260 5 8 HELIX 11 AB2 THR A 266 ALA A 287 1 22 SHEET 1 AA1 7 LEU A 45 GLN A 46 0 SHEET 2 AA1 7 THR A 51 GLN A 53 -1 O GLN A 53 N LEU A 45 SHEET 3 AA1 7 LEU A 62 THR A 66 -1 O LEU A 63 N TRP A 52 SHEET 4 AA1 7 GLY A 69 LEU A 73 -1 O VAL A 71 N VAL A 64 SHEET 5 AA1 7 LEU A 98 LEU A 102 1 O LEU A 102 N LEU A 72 SHEET 6 AA1 7 HIS A 124 ALA A 127 1 O HIS A 124 N ILE A 101 SHEET 7 AA1 7 ARG A 158 ILE A 159 1 O ARG A 158 N ALA A 127 SHEET 1 AA2 5 VAL A 165 VAL A 168 0 SHEET 2 AA2 5 ILE A 171 PHE A 177 -1 O PHE A 173 N VAL A 166 SHEET 3 AA2 5 THR A 186 ARG A 194 -1 O ALA A 187 N HIS A 176 SHEET 4 AA2 5 LYS A 197 TYR A 203 -1 O TYR A 203 N TRP A 188 SHEET 5 AA2 5 LEU A 241 LEU A 243 1 O LEU A 241 N ALA A 202 SSBOND 1 CYS A 239 CYS A 267 1555 1555 2.04 LINK NE2 HIS A 105 CU CU A 302 1555 1555 2.04 LINK ND1 HIS A 107 CU CU A 302 1555 1555 2.18 LINK OD2 ASP A 109 CU CU A 301 1555 1555 2.32 LINK NE2 HIS A 110 CU CU A 301 1555 1555 2.08 LINK NE2 HIS A 181 CU CU A 302 1555 1555 2.21 LINK NE2 HIS A 246 CU CU A 301 1555 1555 2.23 LINK N8 3P7 A 300 CU CU A 301 1555 1555 2.62 LINK O82 3P7 A 300 CU CU A 301 1555 1555 2.33 LINK CU CU A 301 O HOH A 416 1555 1555 2.21 LINK CU CU A 302 O HOH A 416 1555 1555 2.08 SITE 1 AC1 14 TYR A 32 HIS A 107 ASP A 109 HIS A 110 SITE 2 AC1 14 PHE A 145 HIS A 181 SER A 206 SER A 208 SITE 3 AC1 14 PRO A 210 HIS A 246 CU A 301 CU A 302 SITE 4 AC1 14 HOH A 409 HOH A 416 SITE 1 AC2 6 ASP A 109 HIS A 110 HIS A 246 3P7 A 300 SITE 2 AC2 6 CU A 302 HOH A 416 SITE 1 AC3 6 HIS A 105 HIS A 107 HIS A 181 3P7 A 300 SITE 2 AC3 6 CU A 301 HOH A 416 SITE 1 AC4 8 ASP A 142 LEU A 143 HIS A 181 THR A 182 SITE 2 AC4 8 PRO A 183 HOH A 415 HOH A 420 HOH A 443 CRYST1 104.234 104.234 98.793 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009594 0.005539 0.000000 0.00000 SCALE2 0.000000 0.011078 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010122 0.00000