HEADER IMMUNE SYSTEM 22-AUG-19 6U3Z TITLE STRUCTURE OF VD20_5A4 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: V20_5A4 HEAVY CHAIN; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: FAB; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: V20_5A4 LIGHT CHAIN; COMPND 8 CHAIN: B, D; COMPND 9 FRAGMENT: FAB; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 3 ORGANISM_COMMON: RHESUS MACAQUE; SOURCE 4 ORGANISM_TAXID: 9544; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 10 ORGANISM_COMMON: RHESUS MACAQUE; SOURCE 11 ORGANISM_TAXID: 9544; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS FAB, ANTIBODY, HIV, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR G.DIONNE,L.SHAPIRO REVDAT 3 11-OCT-23 6U3Z 1 REMARK REVDAT 2 18-DEC-19 6U3Z 1 JRNL REVDAT 1 20-NOV-19 6U3Z 0 JRNL AUTH G.E.PHAD,P.PUSHPARAJ,K.TRAN,V.DUBROVSKAYA,M.ADORI, JRNL AUTH 2 P.MARTINEZ-MURILLO,N.VAZQUEZ BERNAT,S.SINGH,G.DIONNE, JRNL AUTH 3 S.O'DELL,K.BHULLAR,S.NARANG,C.SORINI,E.J.VILLABLANCA, JRNL AUTH 4 C.SUNDLING,B.MURRELL,J.R.MASCOLA,L.SHAPIRO,M.PANCERA, JRNL AUTH 5 M.MARTIN,M.CORCORAN,R.T.WYATT,G.B.KARLSSON HEDESTAM JRNL TITL EXTENSIVE DISSEMINATION AND INTRACLONAL MATURATION OF HIV JRNL TITL 2 ENV VACCINE-INDUCED B CELL RESPONSES. JRNL REF J.EXP.MED. V. 217 2020 JRNL REFN ESSN 1540-9538 JRNL PMID 31704807 JRNL DOI 10.1084/JEM.20191155 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 84.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.335 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 67147 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.888 REMARK 3 FREE R VALUE TEST SET COUNT : 3282 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 84.3000 - 5.6588 0.98 2820 168 0.1597 0.1970 REMARK 3 2 5.6588 - 4.4916 0.98 2806 142 0.1431 0.1868 REMARK 3 3 4.4916 - 3.9239 0.98 2763 149 0.1494 0.1952 REMARK 3 4 3.9239 - 3.5651 0.98 2803 126 0.1695 0.1618 REMARK 3 5 3.5651 - 3.3096 0.98 2771 134 0.1778 0.2150 REMARK 3 6 3.3096 - 3.1144 0.96 2725 151 0.1903 0.2435 REMARK 3 7 3.1144 - 2.9584 0.97 2762 133 0.1959 0.2630 REMARK 3 8 2.9584 - 2.8297 0.98 2783 139 0.2094 0.2353 REMARK 3 9 2.8297 - 2.7207 0.99 2761 157 0.2148 0.2671 REMARK 3 10 2.7207 - 2.6268 0.99 2779 157 0.2182 0.2513 REMARK 3 11 2.6268 - 2.5447 0.99 2803 128 0.2380 0.2779 REMARK 3 12 2.5447 - 2.4719 0.99 2802 138 0.2422 0.3237 REMARK 3 13 2.4719 - 2.4069 0.99 2777 138 0.2672 0.2698 REMARK 3 14 2.4069 - 2.3481 0.99 2804 144 0.2720 0.2974 REMARK 3 15 2.3481 - 2.2948 0.99 2804 117 0.2814 0.3234 REMARK 3 16 2.2948 - 2.2459 0.99 2798 143 0.2899 0.3215 REMARK 3 17 2.2459 - 2.2010 0.97 2745 142 0.2898 0.3376 REMARK 3 18 2.2010 - 2.1594 0.97 2749 141 0.3048 0.3343 REMARK 3 19 2.1594 - 2.1209 0.97 2741 137 0.3107 0.3547 REMARK 3 20 2.1209 - 2.0849 0.98 2802 146 0.3234 0.3531 REMARK 3 21 2.0849 - 2.0513 0.99 2731 141 0.3163 0.3433 REMARK 3 22 2.0513 - 2.0197 0.98 2790 156 0.3205 0.3670 REMARK 3 23 2.0197 - 1.9990 0.98 2746 155 0.3305 0.3158 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.275 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.152 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.22 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6754 REMARK 3 ANGLE : 0.968 9199 REMARK 3 CHIRALITY : 0.036 1052 REMARK 3 PLANARITY : 0.004 1168 REMARK 3 DIHEDRAL : 12.185 2385 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6U3Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243800. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : CRYOGENICALLY-COOLED SINGLE REMARK 200 CRYSTAL SI(220) SIDE BOUNCE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67170 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 84.310 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 1.19800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.420 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 5F9W, 5DD5, 2BX5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG3000, 0.2 M SODIUM CHLORIDE, REMARK 280 0.1 M TRIS, PH 7, 0.01 M PRASEODYMIUM(III) ACETATE HYDRATE, REMARK 280 CRYOPROTECTANT: 26% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 87.60350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.36650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 87.60350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 54.36650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 223 REMARK 465 CYS A 224 REMARK 465 HIS A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 HIS A 230 REMARK 465 CYS B 214 REMARK 465 SER C 223 REMARK 465 CYS C 224 REMARK 465 HIS C 225 REMARK 465 HIS C 226 REMARK 465 HIS C 227 REMARK 465 HIS C 228 REMARK 465 HIS C 229 REMARK 465 HIS C 230 REMARK 465 CYS D 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 222 CG CD CE NZ REMARK 470 GLU B 213 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS C 96 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 15 -16.86 80.37 REMARK 500 ASN A 32 -171.37 63.43 REMARK 500 ASP A 152 63.71 61.88 REMARK 500 ALA B 51 -40.67 70.67 REMARK 500 SER B 52 -0.09 -140.42 REMARK 500 ASN B 138 66.96 60.91 REMARK 500 ASN B 152 -5.09 74.75 REMARK 500 HIS B 198 147.33 -172.73 REMARK 500 ARG B 211 104.70 -54.88 REMARK 500 ASN C 32 -173.57 61.63 REMARK 500 ASP C 152 65.63 65.58 REMARK 500 THR C 199 -75.49 -112.53 REMARK 500 ALA D 51 -37.93 70.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT D 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 304 DBREF 6U3Z A 1 230 PDB 6U3Z 6U3Z 1 230 DBREF 6U3Z B 1 214 PDB 6U3Z 6U3Z 1 214 DBREF 6U3Z C 1 230 PDB 6U3Z 6U3Z 1 230 DBREF 6U3Z D 1 214 PDB 6U3Z 6U3Z 1 214 SEQRES 1 A 230 GLN VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 A 230 PRO SER GLU THR LEU SER LEU THR CYS ALA VAL SER GLY SEQRES 3 A 230 ALA SER ILE SER SER ASN TYR TRP SER TRP ILE ARG GLN SEQRES 4 A 230 PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY ARG ILE TYR SEQRES 5 A 230 ASP PRO THR ASP SER THR ASP TYR ASN PRO SER LEU GLU SEQRES 6 A 230 SER ARG ALA THR ILE SER LYS ASP THR SER LYS ASN HIS SEQRES 7 A 230 PHE SER LEU THR LEU SER SER VAL THR ALA ALA ASP THR SEQRES 8 A 230 ALA VAL TYR PHE CYS ALA ARG GLY LEU TRP SER GLY TYR SEQRES 9 A 230 PHE PHE TRP PHE ASP VAL TRP GLY PRO GLY VAL LEU VAL SEQRES 10 A 230 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 A 230 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 A 230 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 A 230 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 A 230 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 A 230 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 A 230 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 A 230 LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO SEQRES 18 A 230 LYS SER CYS HIS HIS HIS HIS HIS HIS SEQRES 1 B 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 B 214 SER VAL GLY ASP SER VAL THR VAL THR CYS ARG ALA SER SEQRES 3 B 214 GLN GLY ILE ASP LYS GLU LEU SER TRP TYR GLN GLN LYS SEQRES 4 B 214 PRO GLY LYS ALA PRO THR LEU LEU ILE TYR ALA ALA SER SEQRES 5 B 214 SER LEU GLN THR GLY VAL SER SER ARG PHE SER GLY SER SEQRES 6 B 214 GLY SER GLY THR ASP TYR THR LEU THR ILE SER SER LEU SEQRES 7 B 214 GLN PRO GLU ASP VAL ALA THR TYR TYR CYS LEU GLN ASP SEQRES 8 B 214 TYR ALA THR PRO TYR SER PHE GLY GLN GLY THR LYS VAL SEQRES 9 B 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 B 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 B 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 B 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 B 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 B 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 B 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 B 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 B 214 PHE ASN ARG GLY GLU CYS SEQRES 1 C 230 GLN VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL LYS SEQRES 2 C 230 PRO SER GLU THR LEU SER LEU THR CYS ALA VAL SER GLY SEQRES 3 C 230 ALA SER ILE SER SER ASN TYR TRP SER TRP ILE ARG GLN SEQRES 4 C 230 PRO PRO GLY LYS GLY LEU GLU TRP ILE GLY ARG ILE TYR SEQRES 5 C 230 ASP PRO THR ASP SER THR ASP TYR ASN PRO SER LEU GLU SEQRES 6 C 230 SER ARG ALA THR ILE SER LYS ASP THR SER LYS ASN HIS SEQRES 7 C 230 PHE SER LEU THR LEU SER SER VAL THR ALA ALA ASP THR SEQRES 8 C 230 ALA VAL TYR PHE CYS ALA ARG GLY LEU TRP SER GLY TYR SEQRES 9 C 230 PHE PHE TRP PHE ASP VAL TRP GLY PRO GLY VAL LEU VAL SEQRES 10 C 230 THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE SEQRES 11 C 230 PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR SEQRES 12 C 230 ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU SEQRES 13 C 230 PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER SEQRES 14 C 230 GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY SEQRES 15 C 230 LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SEQRES 16 C 230 SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS SEQRES 17 C 230 LYS PRO SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO SEQRES 18 C 230 LYS SER CYS HIS HIS HIS HIS HIS HIS SEQRES 1 D 214 ASP ILE GLN MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 D 214 SER VAL GLY ASP SER VAL THR VAL THR CYS ARG ALA SER SEQRES 3 D 214 GLN GLY ILE ASP LYS GLU LEU SER TRP TYR GLN GLN LYS SEQRES 4 D 214 PRO GLY LYS ALA PRO THR LEU LEU ILE TYR ALA ALA SER SEQRES 5 D 214 SER LEU GLN THR GLY VAL SER SER ARG PHE SER GLY SER SEQRES 6 D 214 GLY SER GLY THR ASP TYR THR LEU THR ILE SER SER LEU SEQRES 7 D 214 GLN PRO GLU ASP VAL ALA THR TYR TYR CYS LEU GLN ASP SEQRES 8 D 214 TYR ALA THR PRO TYR SER PHE GLY GLN GLY THR LYS VAL SEQRES 9 D 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 D 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 D 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 D 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 D 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 D 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 D 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 D 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 D 214 PHE ASN ARG GLY GLU CYS HET PR B 301 1 HET GOL B 302 6 HET CL C 301 1 HET CL C 302 1 HET GOL C 303 6 HET CL D 301 1 HET CL D 302 1 HET ACT D 303 4 HET GOL D 304 6 HETNAM PR PRASEODYMIUM ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETNAM ACT ACETATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 PR PR 3+ FORMUL 6 GOL 3(C3 H8 O3) FORMUL 7 CL 4(CL 1-) FORMUL 12 ACT C2 H3 O2 1- FORMUL 14 HOH *282(H2 O) HELIX 1 AA1 THR A 87 THR A 91 5 5 HELIX 2 AA2 SER A 135 LYS A 137 5 3 HELIX 3 AA3 SER A 164 ALA A 166 5 3 HELIX 4 AA4 SER A 195 LEU A 197 5 3 HELIX 5 AA5 LYS A 209 ASN A 212 5 4 HELIX 6 AA6 GLN B 79 VAL B 83 5 5 HELIX 7 AA7 SER B 121 LYS B 126 1 6 HELIX 8 AA8 LYS B 183 GLU B 187 1 5 HELIX 9 AA9 THR C 87 THR C 91 5 5 HELIX 10 AB1 SER C 135 LYS C 137 5 3 HELIX 11 AB2 SER C 164 ALA C 166 5 3 HELIX 12 AB3 SER C 195 LEU C 197 5 3 HELIX 13 AB4 LYS C 209 ASN C 212 5 4 HELIX 14 AB5 GLN D 79 VAL D 83 5 5 HELIX 15 AB6 SER D 121 LYS D 126 1 6 HELIX 16 AB7 LYS D 183 GLU D 187 1 5 SHEET 1 AA1 4 GLN A 3 SER A 7 0 SHEET 2 AA1 4 LEU A 18 SER A 25 -1 O ALA A 23 N GLN A 5 SHEET 3 AA1 4 HIS A 78 LEU A 83 -1 O LEU A 83 N LEU A 18 SHEET 4 AA1 4 ALA A 68 ASP A 73 -1 N ASP A 73 O HIS A 78 SHEET 1 AA2 6 LEU A 11 VAL A 12 0 SHEET 2 AA2 6 VAL A 115 VAL A 119 1 O THR A 118 N VAL A 12 SHEET 3 AA2 6 ALA A 92 SER A 102 -1 N TYR A 94 O VAL A 115 SHEET 4 AA2 6 TYR A 33 GLN A 39 -1 N ILE A 37 O PHE A 95 SHEET 5 AA2 6 GLU A 46 TYR A 52 -1 O GLU A 46 N ARG A 38 SHEET 6 AA2 6 SER A 57 TYR A 60 -1 O ASP A 59 N ARG A 50 SHEET 1 AA3 4 LEU A 11 VAL A 12 0 SHEET 2 AA3 4 VAL A 115 VAL A 119 1 O THR A 118 N VAL A 12 SHEET 3 AA3 4 ALA A 92 SER A 102 -1 N TYR A 94 O VAL A 115 SHEET 4 AA3 4 PHE A 105 TRP A 111 -1 O TRP A 107 N LEU A 100 SHEET 1 AA4 4 SER A 128 LEU A 132 0 SHEET 2 AA4 4 THR A 143 TYR A 153 -1 O LEU A 149 N PHE A 130 SHEET 3 AA4 4 TYR A 184 PRO A 193 -1 O VAL A 192 N ALA A 144 SHEET 4 AA4 4 VAL A 171 THR A 173 -1 N HIS A 172 O VAL A 189 SHEET 1 AA5 4 THR A 139 SER A 140 0 SHEET 2 AA5 4 THR A 143 TYR A 153 -1 O THR A 143 N SER A 140 SHEET 3 AA5 4 TYR A 184 PRO A 193 -1 O VAL A 192 N ALA A 144 SHEET 4 AA5 4 VAL A 177 LEU A 178 -1 N VAL A 177 O SER A 185 SHEET 1 AA6 3 THR A 159 TRP A 162 0 SHEET 2 AA6 3 ILE A 203 HIS A 208 -1 O ASN A 205 N SER A 161 SHEET 3 AA6 3 THR A 213 ARG A 218 -1 O VAL A 215 N VAL A 206 SHEET 1 AA7 4 MET B 4 SER B 7 0 SHEET 2 AA7 4 VAL B 19 ALA B 25 -1 O ARG B 24 N THR B 5 SHEET 3 AA7 4 ASP B 70 ILE B 75 -1 O LEU B 73 N VAL B 21 SHEET 4 AA7 4 PHE B 62 SER B 67 -1 N SER B 63 O THR B 74 SHEET 1 AA812 SER B 53 LEU B 54 0 SHEET 2 AA812 THR B 45 TYR B 49 -1 N TYR B 49 O SER B 53 SHEET 3 AA812 LEU B 33 GLN B 38 -1 N TRP B 35 O LEU B 47 SHEET 4 AA812 ALA B 84 GLN B 90 -1 O TYR B 87 N TYR B 36 SHEET 5 AA812 THR B 102 LYS B 107 -1 O VAL B 104 N ALA B 84 SHEET 6 AA812 SER B 10 SER B 14 1 N LEU B 11 O GLU B 105 SHEET 7 AA812 SER D 10 SER D 14 -1 O SER D 10 N SER B 12 SHEET 8 AA812 THR D 102 LYS D 107 1 O GLU D 105 N LEU D 11 SHEET 9 AA812 ALA D 84 GLN D 90 -1 N ALA D 84 O VAL D 104 SHEET 10 AA812 LEU D 33 GLN D 38 -1 N SER D 34 O LEU D 89 SHEET 11 AA812 THR D 45 TYR D 49 -1 O LEU D 47 N TRP D 35 SHEET 12 AA812 SER D 53 LEU D 54 -1 O SER D 53 N TYR D 49 SHEET 1 AA9 8 SER B 97 PHE B 98 0 SHEET 2 AA9 8 ALA B 84 GLN B 90 -1 N GLN B 90 O SER B 97 SHEET 3 AA9 8 THR B 102 LYS B 107 -1 O VAL B 104 N ALA B 84 SHEET 4 AA9 8 SER B 10 SER B 14 1 N LEU B 11 O GLU B 105 SHEET 5 AA9 8 SER D 10 SER D 14 -1 O SER D 10 N SER B 12 SHEET 6 AA9 8 THR D 102 LYS D 107 1 O GLU D 105 N LEU D 11 SHEET 7 AA9 8 ALA D 84 GLN D 90 -1 N ALA D 84 O VAL D 104 SHEET 8 AA9 8 SER D 97 PHE D 98 -1 O SER D 97 N GLN D 90 SHEET 1 AB1 4 SER B 114 PHE B 118 0 SHEET 2 AB1 4 THR B 129 PHE B 139 -1 O LEU B 135 N PHE B 116 SHEET 3 AB1 4 TYR B 173 SER B 182 -1 O LEU B 179 N VAL B 132 SHEET 4 AB1 4 SER B 159 VAL B 163 -1 N GLN B 160 O THR B 178 SHEET 1 AB2 4 ALA B 153 LEU B 154 0 SHEET 2 AB2 4 LYS B 145 VAL B 150 -1 N VAL B 150 O ALA B 153 SHEET 3 AB2 4 VAL B 191 THR B 197 -1 O ALA B 193 N LYS B 149 SHEET 4 AB2 4 VAL B 205 ASN B 210 -1 O VAL B 205 N VAL B 196 SHEET 1 AB3 4 GLN C 3 SER C 7 0 SHEET 2 AB3 4 LEU C 18 SER C 25 -1 O ALA C 23 N GLN C 5 SHEET 3 AB3 4 HIS C 78 LEU C 83 -1 O LEU C 83 N LEU C 18 SHEET 4 AB3 4 ALA C 68 ASP C 73 -1 N ASP C 73 O HIS C 78 SHEET 1 AB4 6 LEU C 11 VAL C 12 0 SHEET 2 AB4 6 VAL C 115 VAL C 119 1 O THR C 118 N VAL C 12 SHEET 3 AB4 6 ALA C 92 SER C 102 -1 N ALA C 92 O VAL C 117 SHEET 4 AB4 6 TYR C 33 GLN C 39 -1 N ILE C 37 O PHE C 95 SHEET 5 AB4 6 GLU C 46 TYR C 52 -1 O ILE C 48 N TRP C 36 SHEET 6 AB4 6 SER C 57 TYR C 60 -1 O ASP C 59 N ARG C 50 SHEET 1 AB5 4 LEU C 11 VAL C 12 0 SHEET 2 AB5 4 VAL C 115 VAL C 119 1 O THR C 118 N VAL C 12 SHEET 3 AB5 4 ALA C 92 SER C 102 -1 N ALA C 92 O VAL C 117 SHEET 4 AB5 4 PHE C 105 TRP C 111 -1 O PHE C 105 N SER C 102 SHEET 1 AB6 4 SER C 128 LEU C 132 0 SHEET 2 AB6 4 THR C 143 TYR C 153 -1 O LEU C 149 N PHE C 130 SHEET 3 AB6 4 TYR C 184 PRO C 193 -1 O VAL C 192 N ALA C 144 SHEET 4 AB6 4 VAL C 171 THR C 173 -1 N HIS C 172 O VAL C 189 SHEET 1 AB7 4 THR C 139 SER C 140 0 SHEET 2 AB7 4 THR C 143 TYR C 153 -1 O THR C 143 N SER C 140 SHEET 3 AB7 4 TYR C 184 PRO C 193 -1 O VAL C 192 N ALA C 144 SHEET 4 AB7 4 VAL C 177 LEU C 178 -1 N VAL C 177 O SER C 185 SHEET 1 AB8 3 THR C 159 TRP C 162 0 SHEET 2 AB8 3 ILE C 203 HIS C 208 -1 O ASN C 205 N SER C 161 SHEET 3 AB8 3 THR C 213 ARG C 218 -1 O VAL C 215 N VAL C 206 SHEET 1 AB9 4 MET D 4 SER D 7 0 SHEET 2 AB9 4 VAL D 19 ALA D 25 -1 O THR D 22 N SER D 7 SHEET 3 AB9 4 ASP D 70 ILE D 75 -1 O LEU D 73 N VAL D 21 SHEET 4 AB9 4 PHE D 62 SER D 67 -1 N SER D 63 O THR D 74 SHEET 1 AC1 4 SER D 114 PHE D 118 0 SHEET 2 AC1 4 THR D 129 PHE D 139 -1 O LEU D 135 N PHE D 116 SHEET 3 AC1 4 TYR D 173 SER D 182 -1 O LEU D 179 N VAL D 132 SHEET 4 AC1 4 SER D 159 VAL D 163 -1 N GLN D 160 O THR D 178 SHEET 1 AC2 4 ALA D 153 LEU D 154 0 SHEET 2 AC2 4 LYS D 145 VAL D 150 -1 N VAL D 150 O ALA D 153 SHEET 3 AC2 4 VAL D 191 THR D 197 -1 O GLU D 195 N GLN D 147 SHEET 4 AC2 4 VAL D 205 ASN D 210 -1 O VAL D 205 N VAL D 196 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.07 SSBOND 2 CYS A 148 CYS A 204 1555 1555 2.03 SSBOND 3 CYS B 23 CYS B 88 1555 1555 2.03 SSBOND 4 CYS B 134 CYS B 194 1555 1555 2.05 SSBOND 5 CYS C 22 CYS C 96 1555 1555 2.06 SSBOND 6 CYS C 148 CYS C 204 1555 1555 2.03 SSBOND 7 CYS D 23 CYS D 88 1555 1555 1.93 SSBOND 8 CYS D 134 CYS D 194 1555 1555 2.04 CISPEP 1 PHE A 154 PRO A 155 0 -4.74 CISPEP 2 GLU A 156 PRO A 157 0 1.08 CISPEP 3 SER B 7 PRO B 8 0 -3.25 CISPEP 4 THR B 94 PRO B 95 0 -1.70 CISPEP 5 TYR B 140 PRO B 141 0 0.31 CISPEP 6 PHE C 154 PRO C 155 0 -10.02 CISPEP 7 GLU C 156 PRO C 157 0 14.25 CISPEP 8 SER D 7 PRO D 8 0 -1.32 CISPEP 9 THR D 94 PRO D 95 0 -0.91 CISPEP 10 TYR D 140 PRO D 141 0 4.82 SITE 1 AC1 10 PHE A 174 PRO A 175 SER A 185 LEU A 186 SITE 2 AC1 10 SER A 187 GLN B 160 SER B 162 SER B 176 SITE 3 AC1 10 SER B 177 THR B 178 SITE 1 AC2 1 VAL C 129 SITE 1 AC3 3 ARG C 98 GLY D 57 HOH D 486 SITE 1 AC4 6 ARG C 67 SER C 85 HOH C 401 LEU D 201 SITE 2 AC4 6 SER D 202 SER D 203 SITE 1 AC5 1 SER D 14 SITE 1 AC6 2 ASP D 30 GLY D 68 SITE 1 AC7 5 SER C 15 THR C 17 SER C 85 VAL D 115 SITE 2 AC7 5 LYS D 207 SITE 1 AC8 9 PHE C 174 PRO C 175 LEU C 186 SER C 187 SITE 2 AC8 9 GLN D 160 SER D 162 SER D 176 SER D 177 SITE 3 AC8 9 THR D 178 CRYST1 175.207 108.733 55.418 90.00 105.78 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005708 0.000000 0.001612 0.00000 SCALE2 0.000000 0.009197 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018751 0.00000