HEADER TRANSPORT PROTEIN 26-AUG-19 6U4X TITLE CRYSTAL STRUCTURE OF EQUINE SERUM ALBUMIN COMPLEX WITH IBUPROFEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERUM ALBUMIN; COMPND 3 CHAIN: A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; SOURCE 3 ORGANISM_COMMON: HORSE; SOURCE 4 ORGANISM_TAXID: 9796 KEYWDS ALBUMIN, IBUPROFEN, NSAID, SA, ESA, CENTER FOR STRUCTURAL GENOMICS OF KEYWDS 2 INFECTIOUS DISEASES, CSGID, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.P.CZUB,K.B.HANDING,B.S.VENKATARAMANY,E.H.STEEN,I.G.SHABALIN, AUTHOR 2 K.J.SATCHELL,A.JOACHIMIAK,W.MINOR,CENTER FOR STRUCTURAL GENOMICS OF AUTHOR 3 INFECTIOUS DISEASES (CSGID) REVDAT 5 11-OCT-23 6U4X 1 REMARK REVDAT 4 22-JUL-20 6U4X 1 JRNL REVDAT 3 15-JUL-20 6U4X 1 JRNL REVDAT 2 18-DEC-19 6U4X 1 REMARK REVDAT 1 04-SEP-19 6U4X 0 JRNL AUTH M.P.CZUB,K.B.HANDING,B.S.VENKATARAMANY,D.R.COOPER, JRNL AUTH 2 I.G.SHABALIN,W.MINOR JRNL TITL ALBUMIN-BASED TRANSPORT OF NONSTEROIDAL ANTI-INFLAMMATORY JRNL TITL 2 DRUGS IN MAMMALIAN BLOOD PLASMA. JRNL REF J.MED.CHEM. V. 63 6847 2020 JRNL REFN ISSN 0022-2623 JRNL PMID 32469516 JRNL DOI 10.1021/ACS.JMEDCHEM.0C00225 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0253 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.66 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.3 REMARK 3 NUMBER OF REFLECTIONS : 27866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1507 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.25 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.31 REMARK 3 REFLECTION IN BIN (WORKING SET) : 846 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 34.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 47 REMARK 3 BIN FREE R VALUE : 0.4330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4568 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 266 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 43.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12000 REMARK 3 B22 (A**2) : 0.12000 REMARK 3 B33 (A**2) : -0.38000 REMARK 3 B12 (A**2) : 0.06000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.361 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.242 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.190 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 15.326 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.923 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4780 ; 0.002 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 4394 ; 0.002 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6474 ; 1.148 ; 1.651 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10280 ; 1.139 ; 1.586 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 583 ; 5.103 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 233 ;33.157 ;23.648 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 850 ;13.783 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;14.484 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 610 ; 0.048 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5225 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 923 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 60 REMARK 3 ORIGIN FOR THE GROUP (A): 48.2440 43.0120 73.4250 REMARK 3 T TENSOR REMARK 3 T11: 0.1136 T22: 0.1070 REMARK 3 T33: 0.0994 T12: -0.0280 REMARK 3 T13: 0.0088 T23: 0.0458 REMARK 3 L TENSOR REMARK 3 L11: 3.3772 L22: 6.8701 REMARK 3 L33: 3.0711 L12: 1.9741 REMARK 3 L13: 1.4891 L23: 1.6087 REMARK 3 S TENSOR REMARK 3 S11: -0.0746 S12: 0.1213 S13: 0.4454 REMARK 3 S21: -0.3904 S22: -0.0347 S23: 0.3275 REMARK 3 S31: -0.3757 S32: -0.1248 S33: 0.1093 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 61 A 98 REMARK 3 ORIGIN FOR THE GROUP (A): 33.9320 44.2320 71.0850 REMARK 3 T TENSOR REMARK 3 T11: 0.1912 T22: 0.1823 REMARK 3 T33: 0.1741 T12: 0.0097 REMARK 3 T13: 0.0505 T23: 0.0718 REMARK 3 L TENSOR REMARK 3 L11: 6.1487 L22: 3.4440 REMARK 3 L33: 8.1716 L12: 0.8101 REMARK 3 L13: 2.5056 L23: 1.3533 REMARK 3 S TENSOR REMARK 3 S11: -0.0475 S12: 0.6405 S13: 0.3297 REMARK 3 S21: -0.4668 S22: -0.0004 S23: 0.0640 REMARK 3 S31: -0.1610 S32: -0.0262 S33: 0.0479 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 99 A 208 REMARK 3 ORIGIN FOR THE GROUP (A): 48.9780 25.7330 64.5070 REMARK 3 T TENSOR REMARK 3 T11: 0.2716 T22: 0.1667 REMARK 3 T33: 0.0825 T12: -0.0569 REMARK 3 T13: 0.0162 T23: -0.0003 REMARK 3 L TENSOR REMARK 3 L11: 3.7497 L22: 2.6255 REMARK 3 L33: 3.1240 L12: 0.3243 REMARK 3 L13: -0.8306 L23: -0.5183 REMARK 3 S TENSOR REMARK 3 S11: -0.0656 S12: 0.5249 S13: -0.1815 REMARK 3 S21: -0.6741 S22: 0.0273 S23: -0.3067 REMARK 3 S31: 0.1754 S32: 0.2010 S33: 0.0383 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 209 A 318 REMARK 3 ORIGIN FOR THE GROUP (A): 48.1640 16.6420 89.4790 REMARK 3 T TENSOR REMARK 3 T11: 0.1267 T22: 0.1485 REMARK 3 T33: 0.0528 T12: -0.0506 REMARK 3 T13: -0.0740 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 1.4253 L22: 4.1470 REMARK 3 L33: 0.9809 L12: 1.0777 REMARK 3 L13: -0.2576 L23: -0.8168 REMARK 3 S TENSOR REMARK 3 S11: 0.0813 S12: -0.1551 S13: 0.0346 REMARK 3 S21: 0.2108 S22: -0.0124 S23: -0.1521 REMARK 3 S31: 0.0560 S32: 0.2250 S33: -0.0690 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 319 A 385 REMARK 3 ORIGIN FOR THE GROUP (A): 33.8120 2.4710 92.3470 REMARK 3 T TENSOR REMARK 3 T11: 0.1506 T22: 0.0642 REMARK 3 T33: 0.0897 T12: 0.0250 REMARK 3 T13: -0.0040 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 3.3387 L22: 3.5898 REMARK 3 L33: 5.3780 L12: 0.9274 REMARK 3 L13: -0.1448 L23: -1.6367 REMARK 3 S TENSOR REMARK 3 S11: -0.1719 S12: -0.2718 S13: -0.0422 REMARK 3 S21: 0.3872 S22: 0.0733 S23: 0.3528 REMARK 3 S31: -0.2226 S32: -0.1446 S33: 0.0985 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 386 A 498 REMARK 3 ORIGIN FOR THE GROUP (A): 34.5490 5.2770 66.1420 REMARK 3 T TENSOR REMARK 3 T11: 0.0646 T22: 0.0581 REMARK 3 T33: 0.0227 T12: -0.0203 REMARK 3 T13: -0.0273 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 1.6084 L22: 2.7708 REMARK 3 L33: 3.7478 L12: -0.6107 REMARK 3 L13: -0.6888 L23: 0.7465 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: -0.0882 S13: 0.0274 REMARK 3 S21: -0.0049 S22: -0.0982 S23: 0.0307 REMARK 3 S31: 0.1083 S32: -0.1226 S33: 0.1060 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 499 A 566 REMARK 3 ORIGIN FOR THE GROUP (A): 34.8640 3.5260 44.1250 REMARK 3 T TENSOR REMARK 3 T11: 0.2212 T22: 0.0281 REMARK 3 T33: 0.0530 T12: 0.0522 REMARK 3 T13: 0.0129 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 3.0657 L22: 2.3402 REMARK 3 L33: 6.8097 L12: 1.1442 REMARK 3 L13: -0.9321 L23: 0.6415 REMARK 3 S TENSOR REMARK 3 S11: 0.0827 S12: 0.1127 S13: 0.0185 REMARK 3 S21: -0.4469 S22: -0.0152 S23: -0.0279 REMARK 3 S31: -0.5837 S32: -0.1689 S33: -0.0675 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 567 A 583 REMARK 3 ORIGIN FOR THE GROUP (A): 29.4460 -1.6530 37.7620 REMARK 3 T TENSOR REMARK 3 T11: 0.3062 T22: 0.1707 REMARK 3 T33: 0.2565 T12: 0.0056 REMARK 3 T13: -0.0313 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 8.7185 L22: 21.5299 REMARK 3 L33: 4.0681 L12: 10.5221 REMARK 3 L13: -5.4952 L23: -8.8839 REMARK 3 S TENSOR REMARK 3 S11: 0.0386 S12: 0.1930 S13: -0.0530 REMARK 3 S21: -0.2569 S22: 0.0638 S23: 0.1322 REMARK 3 S31: 0.0601 S32: -0.0834 S33: -0.1025 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 4 REMARK 4 6U4X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-AUG-19. REMARK 100 THE DEPOSITION ID IS D_1000243937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : SI [111] REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34270 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.29 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 1.11700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.130 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5V0V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 UL OF 36 MG/ML PROTEIN IN 10 MM TRIS REMARK 280 PH 7.5 AND 150 MM NACL BUFFER WAS MIXED WITH 1 UL OF THE WELL REMARK 280 CONDITION (0.2 M LI2SO4, 0.1 M TRIS:HCL, 2.4 M (NH4)2SO4 FINAL REMARK 280 PH 7.4) AND EQUILIBRATED AGAINST WELL SOLUTION IN 15 WELL REMARK 280 CRYSTALLIZATION PLATE (QIAGEN). IBUPROFEN POWDER WAS ADDED TO REMARK 280 THE CRYSTALLIZATION DROP., VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.31300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 94.62600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 70.96950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 118.28250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 23.65650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 THR A 2 REMARK 465 HIS A 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 370 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 494 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 61 -7.14 81.25 REMARK 500 LEU A 80 88.55 -66.81 REMARK 500 HIS A 109 70.80 -118.44 REMARK 500 TYR A 149 105.05 -59.24 REMARK 500 ILE A 270 -59.26 -129.41 REMARK 500 VAL A 468 -30.38 -136.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IBP A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IBP A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 615 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 616 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 617 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 618 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 619 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 620 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 621 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 622 REMARK 999 REMARK 999 SEQUENCE REMARK 999 ACCORDING TO THE NCBI DATABASE, THE MUTATION R584A IS REMARK 999 CHARACTERISTIC FOR EQUUS FERUS PRZEWALSKII, A RARE SUBSPECIES OF REMARK 999 WILD HORSE FROM CENTRAL ASIA (ACCESSION CODE: XP_008524663.1) DBREF 6U4X A 1 583 UNP P35747 ALBU_HORSE 25 607 SEQADV 6U4X ALA A 560 UNP P35747 ARG 584 VARIANT SEQRES 1 A 583 ASP THR HIS LYS SER GLU ILE ALA HIS ARG PHE ASN ASP SEQRES 2 A 583 LEU GLY GLU LYS HIS PHE LYS GLY LEU VAL LEU VAL ALA SEQRES 3 A 583 PHE SER GLN TYR LEU GLN GLN CYS PRO PHE GLU ASP HIS SEQRES 4 A 583 VAL LYS LEU VAL ASN GLU VAL THR GLU PHE ALA LYS LYS SEQRES 5 A 583 CYS ALA ALA ASP GLU SER ALA GLU ASN CYS ASP LYS SER SEQRES 6 A 583 LEU HIS THR LEU PHE GLY ASP LYS LEU CYS THR VAL ALA SEQRES 7 A 583 THR LEU ARG ALA THR TYR GLY GLU LEU ALA ASP CYS CYS SEQRES 8 A 583 GLU LYS GLN GLU PRO GLU ARG ASN GLU CYS PHE LEU THR SEQRES 9 A 583 HIS LYS ASP ASP HIS PRO ASN LEU PRO LYS LEU LYS PRO SEQRES 10 A 583 GLU PRO ASP ALA GLN CYS ALA ALA PHE GLN GLU ASP PRO SEQRES 11 A 583 ASP LYS PHE LEU GLY LYS TYR LEU TYR GLU VAL ALA ARG SEQRES 12 A 583 ARG HIS PRO TYR PHE TYR GLY PRO GLU LEU LEU PHE HIS SEQRES 13 A 583 ALA GLU GLU TYR LYS ALA ASP PHE THR GLU CYS CYS PRO SEQRES 14 A 583 ALA ASP ASP LYS LEU ALA CYS LEU ILE PRO LYS LEU ASP SEQRES 15 A 583 ALA LEU LYS GLU ARG ILE LEU LEU SER SER ALA LYS GLU SEQRES 16 A 583 ARG LEU LYS CYS SER SER PHE GLN ASN PHE GLY GLU ARG SEQRES 17 A 583 ALA VAL LYS ALA TRP SER VAL ALA ARG LEU SER GLN LYS SEQRES 18 A 583 PHE PRO LYS ALA ASP PHE ALA GLU VAL SER LYS ILE VAL SEQRES 19 A 583 THR ASP LEU THR LYS VAL HIS LYS GLU CYS CYS HIS GLY SEQRES 20 A 583 ASP LEU LEU GLU CYS ALA ASP ASP ARG ALA ASP LEU ALA SEQRES 21 A 583 LYS TYR ILE CYS GLU HIS GLN ASP SER ILE SER GLY LYS SEQRES 22 A 583 LEU LYS ALA CYS CYS ASP LYS PRO LEU LEU GLN LYS SER SEQRES 23 A 583 HIS CYS ILE ALA GLU VAL LYS GLU ASP ASP LEU PRO SER SEQRES 24 A 583 ASP LEU PRO ALA LEU ALA ALA ASP PHE ALA GLU ASP LYS SEQRES 25 A 583 GLU ILE CYS LYS HIS TYR LYS ASP ALA LYS ASP VAL PHE SEQRES 26 A 583 LEU GLY THR PHE LEU TYR GLU TYR SER ARG ARG HIS PRO SEQRES 27 A 583 ASP TYR SER VAL SER LEU LEU LEU ARG ILE ALA LYS THR SEQRES 28 A 583 TYR GLU ALA THR LEU GLU LYS CYS CYS ALA GLU ALA ASP SEQRES 29 A 583 PRO PRO ALA CYS TYR ARG THR VAL PHE ASP GLN PHE THR SEQRES 30 A 583 PRO LEU VAL GLU GLU PRO LYS SER LEU VAL LYS LYS ASN SEQRES 31 A 583 CYS ASP LEU PHE GLU GLU VAL GLY GLU TYR ASP PHE GLN SEQRES 32 A 583 ASN ALA LEU ILE VAL ARG TYR THR LYS LYS ALA PRO GLN SEQRES 33 A 583 VAL SER THR PRO THR LEU VAL GLU ILE GLY ARG THR LEU SEQRES 34 A 583 GLY LYS VAL GLY SER ARG CYS CYS LYS LEU PRO GLU SER SEQRES 35 A 583 GLU ARG LEU PRO CYS SER GLU ASN HIS LEU ALA LEU ALA SEQRES 36 A 583 LEU ASN ARG LEU CYS VAL LEU HIS GLU LYS THR PRO VAL SEQRES 37 A 583 SER GLU LYS ILE THR LYS CYS CYS THR ASP SER LEU ALA SEQRES 38 A 583 GLU ARG ARG PRO CYS PHE SER ALA LEU GLU LEU ASP GLU SEQRES 39 A 583 GLY TYR VAL PRO LYS GLU PHE LYS ALA GLU THR PHE THR SEQRES 40 A 583 PHE HIS ALA ASP ILE CYS THR LEU PRO GLU ASP GLU LYS SEQRES 41 A 583 GLN ILE LYS LYS GLN SER ALA LEU ALA GLU LEU VAL LYS SEQRES 42 A 583 HIS LYS PRO LYS ALA THR LYS GLU GLN LEU LYS THR VAL SEQRES 43 A 583 LEU GLY ASN PHE SER ALA PHE VAL ALA LYS CYS CYS GLY SEQRES 44 A 583 ALA GLU ASP LYS GLU ALA CYS PHE ALA GLU GLU GLY PRO SEQRES 45 A 583 LYS LEU VAL ALA SER SER GLN LEU ALA LEU ALA HET UNL A 601 11 HET UNX A 602 1 HET UNX A 603 1 HET UNX A 604 1 HET UNX A 605 1 HET UNX A 606 1 HET UNX A 607 1 HET UNX A 608 1 HET UNX A 609 1 HET UNX A 610 1 HET IBP A 611 15 HET IBP A 612 15 HET SO4 A 613 5 HET SO4 A 614 5 HET SO4 A 615 5 HET SO4 A 616 5 HET SO4 A 617 5 HET SO4 A 618 5 HET SO4 A 619 5 HET SO4 A 620 5 HET SO4 A 621 5 HET SO4 A 622 5 HETNAM UNL UNKNOWN LIGAND HETNAM UNX UNKNOWN ATOM OR ION HETNAM IBP IBUPROFEN HETNAM SO4 SULFATE ION HETSYN IBP 2-(4-ISOBUTYLPHENYL)PROPIONIC ACID FORMUL 3 UNX 9(X) FORMUL 12 IBP 2(C13 H18 O2) FORMUL 14 SO4 10(O4 S 2-) FORMUL 24 HOH *266(H2 O) HELIX 1 AA1 SER A 5 GLY A 15 1 11 HELIX 2 AA2 GLY A 15 LEU A 31 1 17 HELIX 3 AA3 PRO A 35 ASP A 56 1 22 HELIX 4 AA4 SER A 65 CYS A 75 1 11 HELIX 5 AA5 TYR A 84 CYS A 91 1 8 HELIX 6 AA6 PRO A 96 HIS A 105 1 10 HELIX 7 AA7 GLU A 118 ASP A 129 1 12 HELIX 8 AA8 ASP A 129 HIS A 145 1 17 HELIX 9 AA9 TYR A 149 CYS A 168 1 20 HELIX 10 AB1 LYS A 173 PHE A 205 1 33 HELIX 11 AB2 GLY A 206 PHE A 222 1 17 HELIX 12 AB3 ASP A 226 HIS A 246 1 21 HELIX 13 AB4 ASP A 248 HIS A 266 1 19 HELIX 14 AB5 GLN A 267 ILE A 270 5 4 HELIX 15 AB6 ALA A 276 LYS A 280 5 5 HELIX 16 AB7 PRO A 281 GLU A 291 1 11 HELIX 17 AB8 ALA A 303 ALA A 309 1 7 HELIX 18 AB9 GLU A 313 ALA A 321 1 9 HELIX 19 AC1 ALA A 321 HIS A 337 1 17 HELIX 20 AC2 SER A 341 CYS A 360 1 20 HELIX 21 AC3 ASP A 364 ARG A 370 1 7 HELIX 22 AC4 THR A 371 ASP A 374 5 4 HELIX 23 AC5 GLN A 375 ALA A 414 1 40 HELIX 24 AC6 SER A 418 CYS A 437 1 20 HELIX 25 AC7 PRO A 440 THR A 466 1 27 HELIX 26 AC8 SER A 469 ASP A 478 1 10 HELIX 27 AC9 GLU A 482 LEU A 490 1 9 HELIX 28 AD1 LYS A 502 THR A 507 1 6 HELIX 29 AD2 HIS A 509 THR A 514 5 6 HELIX 30 AD3 PRO A 516 LYS A 535 1 20 HELIX 31 AD4 THR A 539 GLY A 559 1 21 HELIX 32 AD5 ASP A 562 LEU A 582 1 21 SSBOND 1 CYS A 53 CYS A 62 1555 1555 2.04 SSBOND 2 CYS A 75 CYS A 91 1555 1555 2.04 SSBOND 3 CYS A 90 CYS A 101 1555 1555 2.05 SSBOND 4 CYS A 123 CYS A 168 1555 1555 2.04 SSBOND 5 CYS A 167 CYS A 176 1555 1555 2.05 SSBOND 6 CYS A 199 CYS A 245 1555 1555 2.04 SSBOND 7 CYS A 244 CYS A 252 1555 1555 2.03 SSBOND 8 CYS A 264 CYS A 278 1555 1555 2.03 SSBOND 9 CYS A 277 CYS A 288 1555 1555 2.05 SSBOND 10 CYS A 315 CYS A 360 1555 1555 2.04 SSBOND 11 CYS A 359 CYS A 368 1555 1555 2.03 SSBOND 12 CYS A 391 CYS A 437 1555 1555 2.04 SSBOND 13 CYS A 436 CYS A 447 1555 1555 2.05 SSBOND 14 CYS A 460 CYS A 476 1555 1555 2.04 SSBOND 15 CYS A 475 CYS A 486 1555 1555 2.07 SSBOND 16 CYS A 513 CYS A 558 1555 1555 2.04 SSBOND 17 CYS A 557 CYS A 566 1555 1555 2.05 CISPEP 1 GLU A 95 PRO A 96 0 -4.10 SITE 1 AC1 7 ARG A 409 TYR A 410 LYS A 413 LEU A 452 SITE 2 AC1 7 LEU A 459 PHE A 487 HOH A 780 SITE 1 AC2 6 LYS A 17 LYS A 20 GLY A 21 LEU A 24 SITE 2 AC2 6 ASP A 131 LEU A 154 SITE 1 AC3 7 SER A 341 SER A 343 ARG A 347 PRO A 383 SITE 2 AC3 7 GLU A 449 ARG A 484 HOH A 770 SITE 1 AC4 4 ALA A 303 LEU A 304 ALA A 305 ARG A 336 SITE 1 AC5 5 LYS A 412 THR A 539 LYS A 540 HOH A 704 SITE 2 AC5 5 HOH A 722 SITE 1 AC6 4 HIS A 9 ASN A 12 ASP A 13 GLU A 57 SITE 1 AC7 5 LYS A 224 PRO A 298 SER A 299 GLU A 569 SITE 2 AC7 5 GLU A 570 SITE 1 AC8 3 SER A 65 HIS A 67 HOH A 701 SITE 1 AC9 3 LYS A 180 ALA A 183 ARG A 187 SITE 1 AD1 2 PRO A 516 GLU A 517 SITE 1 AD2 4 GLY A 206 GLU A 207 HOH A 710 HOH A 739 SITE 1 AD3 4 ASN A 111 GLU A 265 HIS A 266 SER A 269 CRYST1 95.232 95.232 141.939 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010501 0.006063 0.000000 0.00000 SCALE2 0.000000 0.012125 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007045 0.00000