HEADER TRANSCRIPTION 04-SEP-19 6U80 TITLE DISCOVERY AND OPTIMIZATION OF SALICYCLIC ACID-DERIVED SULFONAMIDE TITLE 2 INHIBITORS OF THE WDR5:MYC PROTEIN-PROTEIN INTERACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: WD REPEAT-CONTAINING PROTEIN 5; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BMP2-INDUCED 3-KB GENE PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: WDR5, BIG3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI K-12; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333 KEYWDS WDR5, MYC, RBBP5, STRUCTURE-BASED DESIGN, HIGH-THROUGHPUT SCREENING, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR B.ZHAO,F.WANG REVDAT 4 11-OCT-23 6U80 1 REMARK REVDAT 3 08-JAN-20 6U80 1 JRNL REVDAT 2 18-DEC-19 6U80 1 JRNL REVDAT 1 04-DEC-19 6U80 0 JRNL AUTH J.D.MACDONALD,S.CHACON SIMON,C.HAN,F.WANG,J.G.SHAW, JRNL AUTH 2 J.E.HOWES,J.SAI,J.P.YUH,D.CAMPER,B.M.ALICIE,J.ALVARADO, JRNL AUTH 3 S.NIKHAR,W.PAYNE,E.R.AHO,J.A.BAUER,B.ZHAO,J.PHAN,L.R.THOMAS, JRNL AUTH 4 O.W.ROSSANESE,W.P.TANSEY,A.G.WATERSON,S.R.STAUFFER,S.W.FESIK JRNL TITL DISCOVERY AND OPTIMIZATION OF SALICYLIC ACID-DERIVED JRNL TITL 2 SULFONAMIDE INHIBITORS OF THE WD REPEAT-CONTAINING PROTEIN JRNL TITL 3 5-MYC PROTEIN-PROTEIN INTERACTION. JRNL REF J.MED.CHEM. V. 62 11232 2019 JRNL REFN ISSN 0022-2623 JRNL PMID 31724864 JRNL DOI 10.1021/ACS.JMEDCHEM.9B01411 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.15.2_3472 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.5 REMARK 3 NUMBER OF REFLECTIONS : 75677 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.203 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 3666 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.6800 - 4.5835 0.92 2780 145 0.1460 0.1646 REMARK 3 2 4.5835 - 3.6414 0.61 1832 92 0.1345 0.1623 REMARK 3 3 3.6414 - 3.1820 0.87 2590 160 0.1458 0.1575 REMARK 3 4 3.1820 - 2.8915 0.95 2874 156 0.1650 0.2140 REMARK 3 5 2.8915 - 2.6845 0.94 2841 162 0.1692 0.1878 REMARK 3 6 2.6845 - 2.5264 0.94 2873 138 0.1767 0.2124 REMARK 3 7 2.5264 - 2.4000 0.95 2849 143 0.1815 0.2234 REMARK 3 8 2.4000 - 2.2956 0.93 2812 135 0.1822 0.2186 REMARK 3 9 2.2956 - 2.2072 0.82 2455 138 0.1792 0.1999 REMARK 3 10 2.2072 - 2.1311 0.95 2864 126 0.1788 0.2189 REMARK 3 11 2.1311 - 2.0645 0.95 2947 117 0.1701 0.2155 REMARK 3 12 2.0645 - 2.0055 0.94 2871 129 0.1733 0.2141 REMARK 3 13 2.0055 - 1.9527 0.94 2835 120 0.1758 0.2240 REMARK 3 14 1.9527 - 1.9051 0.93 2862 103 0.1752 0.2296 REMARK 3 15 1.9051 - 1.8618 0.84 2505 152 0.1820 0.2204 REMARK 3 16 1.8618 - 1.8222 0.93 2809 169 0.1847 0.2316 REMARK 3 17 1.8222 - 1.7858 0.93 2838 149 0.1806 0.2087 REMARK 3 18 1.7858 - 1.7521 0.94 2822 135 0.1887 0.2575 REMARK 3 19 1.7521 - 1.7208 0.94 2851 154 0.1876 0.2461 REMARK 3 20 1.7208 - 1.6916 0.93 2803 135 0.1946 0.2570 REMARK 3 21 1.6916 - 1.6643 0.94 2873 168 0.1978 0.2465 REMARK 3 22 1.6643 - 1.6387 0.94 2808 132 0.2084 0.2308 REMARK 3 23 1.6387 - 1.6146 0.94 2868 153 0.2122 0.2771 REMARK 3 24 1.6146 - 1.5919 0.94 2884 143 0.2167 0.2621 REMARK 3 25 1.5919 - 1.5704 0.94 2832 161 0.2226 0.2541 REMARK 3 26 1.5704 - 1.5500 0.94 2833 151 0.2352 0.2665 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2547 46.8491 2.4339 REMARK 3 T TENSOR REMARK 3 T11: 0.3374 T22: 0.1385 REMARK 3 T33: 0.1443 T12: 0.0222 REMARK 3 T13: 0.0327 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.5592 L22: 0.3264 REMARK 3 L33: 0.3449 L12: -0.1856 REMARK 3 L13: 0.3935 L23: 0.0042 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.2596 S13: -0.0091 REMARK 3 S21: 0.1674 S22: 0.0015 S23: 0.0472 REMARK 3 S31: -0.1398 S32: 0.0818 S33: 0.0373 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 190 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1263 31.4787 -13.2585 REMARK 3 T TENSOR REMARK 3 T11: 0.2143 T22: 0.1461 REMARK 3 T33: 0.1000 T12: 0.0053 REMARK 3 T13: -0.0108 T23: 0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.5199 L22: 0.8703 REMARK 3 L33: 0.7758 L12: 0.1976 REMARK 3 L13: 0.0892 L23: 0.0476 REMARK 3 S TENSOR REMARK 3 S11: 0.0301 S12: 0.0083 S13: -0.0027 REMARK 3 S21: -0.0035 S22: -0.0411 S23: -0.0511 REMARK 3 S31: 0.0424 S32: 0.0757 S33: 0.0132 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 191 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6530 23.2283 -11.9918 REMARK 3 T TENSOR REMARK 3 T11: 0.2384 T22: 0.1385 REMARK 3 T33: 0.1433 T12: -0.0203 REMARK 3 T13: -0.0152 T23: 0.0181 REMARK 3 L TENSOR REMARK 3 L11: 0.9261 L22: 0.6540 REMARK 3 L33: 1.6417 L12: -0.2079 REMARK 3 L13: 0.0274 L23: 0.0811 REMARK 3 S TENSOR REMARK 3 S11: -0.0194 S12: -0.0108 S13: -0.1407 REMARK 3 S21: 0.0357 S22: -0.0229 S23: 0.0767 REMARK 3 S31: 0.0245 S32: -0.1705 S33: 0.0309 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 234 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.2577 40.5973 -6.3657 REMARK 3 T TENSOR REMARK 3 T11: 0.2377 T22: 0.1217 REMARK 3 T33: 0.1090 T12: 0.0201 REMARK 3 T13: 0.0053 T23: 0.0208 REMARK 3 L TENSOR REMARK 3 L11: 1.3835 L22: 0.6649 REMARK 3 L33: 0.9745 L12: 0.1740 REMARK 3 L13: 0.0820 L23: -0.2483 REMARK 3 S TENSOR REMARK 3 S11: 0.0296 S12: 0.0715 S13: 0.0093 REMARK 3 S21: 0.0557 S22: 0.0481 S23: 0.0800 REMARK 3 S31: -0.1031 S32: -0.0378 S33: -0.0499 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 24 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4472 20.8580 9.7637 REMARK 3 T TENSOR REMARK 3 T11: 0.3585 T22: 0.2063 REMARK 3 T33: 0.1571 T12: 0.0113 REMARK 3 T13: 0.0308 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 0.2682 L22: 0.0771 REMARK 3 L33: 0.0041 L12: 0.1450 REMARK 3 L13: 0.0277 L23: 0.0194 REMARK 3 S TENSOR REMARK 3 S11: -0.0252 S12: 0.1856 S13: -0.0538 REMARK 3 S21: -0.1297 S22: 0.0083 S23: -0.0820 REMARK 3 S31: 0.1371 S32: -0.0329 S33: -0.0060 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 48 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.4025 14.7359 25.8413 REMARK 3 T TENSOR REMARK 3 T11: 0.2482 T22: 0.1333 REMARK 3 T33: 0.1077 T12: 0.0106 REMARK 3 T13: -0.0276 T23: 0.0161 REMARK 3 L TENSOR REMARK 3 L11: 0.3798 L22: 1.0331 REMARK 3 L33: 0.4470 L12: 0.2064 REMARK 3 L13: -0.2411 L23: -0.4568 REMARK 3 S TENSOR REMARK 3 S11: 0.0162 S12: 0.0190 S13: 0.0229 REMARK 3 S21: -0.0795 S22: 0.0254 S23: 0.0976 REMARK 3 S31: 0.0737 S32: 0.0118 S33: -0.0369 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 180 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.8435 -1.1709 24.0283 REMARK 3 T TENSOR REMARK 3 T11: 0.3740 T22: 0.1435 REMARK 3 T33: 0.1640 T12: 0.0327 REMARK 3 T13: 0.0119 T23: 0.0200 REMARK 3 L TENSOR REMARK 3 L11: 1.6144 L22: 0.2959 REMARK 3 L33: 0.9804 L12: 0.6553 REMARK 3 L13: 0.3920 L23: 0.1792 REMARK 3 S TENSOR REMARK 3 S11: -0.0218 S12: 0.0597 S13: -0.1649 REMARK 3 S21: -0.3048 S22: 0.0162 S23: -0.0989 REMARK 3 S31: 0.0384 S32: 0.1345 S33: -0.0281 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 234 THROUGH 303 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4311 9.8131 19.5602 REMARK 3 T TENSOR REMARK 3 T11: 0.2713 T22: 0.1676 REMARK 3 T33: 0.1518 T12: 0.0346 REMARK 3 T13: 0.0283 T23: 0.0456 REMARK 3 L TENSOR REMARK 3 L11: 1.4901 L22: 1.2183 REMARK 3 L33: 0.6705 L12: -0.0043 REMARK 3 L13: -0.4216 L23: 0.1135 REMARK 3 S TENSOR REMARK 3 S11: -0.0785 S12: -0.0468 S13: -0.1859 REMARK 3 S21: -0.0552 S22: -0.0467 S23: -0.1518 REMARK 3 S31: 0.1753 S32: -0.0105 S33: 0.1109 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 304 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0384 22.1153 17.0711 REMARK 3 T TENSOR REMARK 3 T11: 0.2741 T22: 0.1603 REMARK 3 T33: 0.1115 T12: 0.0426 REMARK 3 T13: 0.0084 T23: 0.0400 REMARK 3 L TENSOR REMARK 3 L11: 1.9193 L22: 0.7446 REMARK 3 L33: 0.6099 L12: 0.0618 REMARK 3 L13: 0.3537 L23: -0.0693 REMARK 3 S TENSOR REMARK 3 S11: 0.0372 S12: 0.0616 S13: 0.0900 REMARK 3 S21: -0.1217 S22: -0.0698 S23: -0.0635 REMARK 3 S31: 0.0231 S32: 0.1250 S33: 0.0136 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6U80 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1000244110. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 75823 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : 0.07200 REMARK 200 FOR THE DATA SET : 13.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.40100 REMARK 200 R SYM FOR SHELL (I) : 0.40800 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6DY7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: BIS-TRIS, AMMONIUM ACETATE, PEG 3350, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 211 REMARK 465 ASP A 212 REMARK 465 ILE B 210 REMARK 465 ASP B 211 REMARK 465 ASP B 212 REMARK 465 ASP B 213 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 LYS A 32 NZ REMARK 470 LEU A 102 CG CD1 CD2 REMARK 470 LYS A 159 CG CD CE NZ REMARK 470 LYS A 162 CE NZ REMARK 470 LYS A 207 CE NZ REMARK 470 ILE A 210 CG1 CG2 CD1 REMARK 470 ASP A 213 CG OD1 OD2 REMARK 470 ASN A 214 CG OD1 ND2 REMARK 470 LYS A 227 CE NZ REMARK 470 LYS A 247 CD CE NZ REMARK 470 LYS A 256 CD CE NZ REMARK 470 GLU A 292 CD OE1 OE2 REMARK 470 LYS B 27 NZ REMARK 470 LYS B 87 CE NZ REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 ARG B 181 CD NE CZ NH1 NH2 REMARK 470 LYS B 207 CG CD CE NZ REMARK 470 LYS B 227 CE NZ REMARK 470 LYS B 239 CE NZ REMARK 470 SER B 244 OG REMARK 470 LYS B 245 CG CD CE NZ REMARK 470 LYS B 247 CG CD CE NZ REMARK 470 LYS B 259 CE NZ REMARK 470 LYS B 272 CE NZ REMARK 470 GLN B 289 CD OE1 NE2 REMARK 470 GLN B 298 CD OE1 NE2 REMARK 470 GLU B 313 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 234 39.58 -80.73 REMARK 500 LYS A 259 -43.44 -133.54 REMARK 500 LEU A 321 -167.60 -79.21 REMARK 500 ASP A 324 -63.22 -107.07 REMARK 500 LEU B 234 40.12 -78.82 REMARK 500 ASN B 257 89.81 -155.30 REMARK 500 LYS B 259 -48.59 -135.90 REMARK 500 LYS B 259 -48.59 -133.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 895 DISTANCE = 7.03 ANGSTROMS REMARK 525 HOH B 855 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B 856 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH B 857 DISTANCE = 5.93 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q1J A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue Q1J B 401 DBREF 6U80 A 24 334 UNP P61964 WDR5_HUMAN 24 334 DBREF 6U80 B 24 334 UNP P61964 WDR5_HUMAN 24 334 SEQRES 1 A 311 THR GLN SER LYS PRO THR PRO VAL LYS PRO ASN TYR ALA SEQRES 2 A 311 LEU LYS PHE THR LEU ALA GLY HIS THR LYS ALA VAL SER SEQRES 3 A 311 SER VAL LYS PHE SER PRO ASN GLY GLU TRP LEU ALA SER SEQRES 4 A 311 SER SER ALA ASP LYS LEU ILE LYS ILE TRP GLY ALA TYR SEQRES 5 A 311 ASP GLY LYS PHE GLU LYS THR ILE SER GLY HIS LYS LEU SEQRES 6 A 311 GLY ILE SER ASP VAL ALA TRP SER SER ASP SER ASN LEU SEQRES 7 A 311 LEU VAL SER ALA SER ASP ASP LYS THR LEU LYS ILE TRP SEQRES 8 A 311 ASP VAL SER SER GLY LYS CYS LEU LYS THR LEU LYS GLY SEQRES 9 A 311 HIS SER ASN TYR VAL PHE CYS CYS ASN PHE ASN PRO GLN SEQRES 10 A 311 SER ASN LEU ILE VAL SER GLY SER PHE ASP GLU SER VAL SEQRES 11 A 311 ARG ILE TRP ASP VAL LYS THR GLY LYS CYS LEU LYS THR SEQRES 12 A 311 LEU PRO ALA HIS SER ASP PRO VAL SER ALA VAL HIS PHE SEQRES 13 A 311 ASN ARG ASP GLY SER LEU ILE VAL SER SER SER TYR ASP SEQRES 14 A 311 GLY LEU CYS ARG ILE TRP ASP THR ALA SER GLY GLN CYS SEQRES 15 A 311 LEU LYS THR LEU ILE ASP ASP ASP ASN PRO PRO VAL SER SEQRES 16 A 311 PHE VAL LYS PHE SER PRO ASN GLY LYS TYR ILE LEU ALA SEQRES 17 A 311 ALA THR LEU ASP ASN THR LEU LYS LEU TRP ASP TYR SER SEQRES 18 A 311 LYS GLY LYS CYS LEU LYS THR TYR THR GLY HIS LYS ASN SEQRES 19 A 311 GLU LYS TYR CYS ILE PHE ALA ASN PHE SER VAL THR GLY SEQRES 20 A 311 GLY LYS TRP ILE VAL SER GLY SER GLU ASP ASN LEU VAL SEQRES 21 A 311 TYR ILE TRP ASN LEU GLN THR LYS GLU ILE VAL GLN LYS SEQRES 22 A 311 LEU GLN GLY HIS THR ASP VAL VAL ILE SER THR ALA CYS SEQRES 23 A 311 HIS PRO THR GLU ASN ILE ILE ALA SER ALA ALA LEU GLU SEQRES 24 A 311 ASN ASP LYS THR ILE LYS LEU TRP LYS SER ASP CYS SEQRES 1 B 311 THR GLN SER LYS PRO THR PRO VAL LYS PRO ASN TYR ALA SEQRES 2 B 311 LEU LYS PHE THR LEU ALA GLY HIS THR LYS ALA VAL SER SEQRES 3 B 311 SER VAL LYS PHE SER PRO ASN GLY GLU TRP LEU ALA SER SEQRES 4 B 311 SER SER ALA ASP LYS LEU ILE LYS ILE TRP GLY ALA TYR SEQRES 5 B 311 ASP GLY LYS PHE GLU LYS THR ILE SER GLY HIS LYS LEU SEQRES 6 B 311 GLY ILE SER ASP VAL ALA TRP SER SER ASP SER ASN LEU SEQRES 7 B 311 LEU VAL SER ALA SER ASP ASP LYS THR LEU LYS ILE TRP SEQRES 8 B 311 ASP VAL SER SER GLY LYS CYS LEU LYS THR LEU LYS GLY SEQRES 9 B 311 HIS SER ASN TYR VAL PHE CYS CYS ASN PHE ASN PRO GLN SEQRES 10 B 311 SER ASN LEU ILE VAL SER GLY SER PHE ASP GLU SER VAL SEQRES 11 B 311 ARG ILE TRP ASP VAL LYS THR GLY LYS CYS LEU LYS THR SEQRES 12 B 311 LEU PRO ALA HIS SER ASP PRO VAL SER ALA VAL HIS PHE SEQRES 13 B 311 ASN ARG ASP GLY SER LEU ILE VAL SER SER SER TYR ASP SEQRES 14 B 311 GLY LEU CYS ARG ILE TRP ASP THR ALA SER GLY GLN CYS SEQRES 15 B 311 LEU LYS THR LEU ILE ASP ASP ASP ASN PRO PRO VAL SER SEQRES 16 B 311 PHE VAL LYS PHE SER PRO ASN GLY LYS TYR ILE LEU ALA SEQRES 17 B 311 ALA THR LEU ASP ASN THR LEU LYS LEU TRP ASP TYR SER SEQRES 18 B 311 LYS GLY LYS CYS LEU LYS THR TYR THR GLY HIS LYS ASN SEQRES 19 B 311 GLU LYS TYR CYS ILE PHE ALA ASN PHE SER VAL THR GLY SEQRES 20 B 311 GLY LYS TRP ILE VAL SER GLY SER GLU ASP ASN LEU VAL SEQRES 21 B 311 TYR ILE TRP ASN LEU GLN THR LYS GLU ILE VAL GLN LYS SEQRES 22 B 311 LEU GLN GLY HIS THR ASP VAL VAL ILE SER THR ALA CYS SEQRES 23 B 311 HIS PRO THR GLU ASN ILE ILE ALA SER ALA ALA LEU GLU SEQRES 24 B 311 ASN ASP LYS THR ILE LYS LEU TRP LYS SER ASP CYS HET Q1J A 401 26 HET Q1J B 401 26 HETNAM Q1J 5-BROMO-N-(4-HYDROXY[1,1'-BIPHENYL]-3-YL)-2- HETNAM 2 Q1J METHOXYBENZENE-1-SULFONAMIDE FORMUL 3 Q1J 2(C19 H16 BR N O4 S) FORMUL 5 HOH *752(H2 O) SHEET 1 AA1 4 ALA A 36 LEU A 41 0 SHEET 2 AA1 4 ILE A 327 LYS A 331 -1 O ILE A 327 N LEU A 41 SHEET 3 AA1 4 ILE A 315 ALA A 320 -1 N ILE A 316 O TRP A 330 SHEET 4 AA1 4 VAL A 304 CYS A 309 -1 N ALA A 308 O ALA A 317 SHEET 1 AA2 4 VAL A 48 PHE A 53 0 SHEET 2 AA2 4 TRP A 59 SER A 64 -1 O ALA A 61 N LYS A 52 SHEET 3 AA2 4 ILE A 69 GLY A 73 -1 O TRP A 72 N LEU A 60 SHEET 4 AA2 4 PHE A 79 ILE A 83 -1 O ILE A 83 N ILE A 69 SHEET 1 AA3 4 ILE A 90 TRP A 95 0 SHEET 2 AA3 4 LEU A 101 SER A 106 -1 O ALA A 105 N SER A 91 SHEET 3 AA3 4 THR A 110 ASP A 115 -1 O TRP A 114 N LEU A 102 SHEET 4 AA3 4 LYS A 120 LYS A 126 -1 O LEU A 122 N ILE A 113 SHEET 1 AA4 4 VAL A 132 PHE A 137 0 SHEET 2 AA4 4 LEU A 143 SER A 148 -1 O VAL A 145 N ASN A 136 SHEET 3 AA4 4 VAL A 153 ASP A 157 -1 O TRP A 156 N ILE A 144 SHEET 4 AA4 4 CYS A 163 LEU A 167 -1 O LEU A 167 N VAL A 153 SHEET 1 AA5 4 VAL A 174 PHE A 179 0 SHEET 2 AA5 4 LEU A 185 SER A 190 -1 O VAL A 187 N HIS A 178 SHEET 3 AA5 4 CYS A 195 ASP A 199 -1 O TRP A 198 N ILE A 186 SHEET 4 AA5 4 CYS A 205 LEU A 209 -1 O LEU A 206 N ILE A 197 SHEET 1 AA6 4 VAL A 217 PHE A 222 0 SHEET 2 AA6 4 TYR A 228 THR A 233 -1 O LEU A 230 N LYS A 221 SHEET 3 AA6 4 THR A 237 ASP A 242 -1 O TRP A 241 N ILE A 229 SHEET 4 AA6 4 LYS A 247 TYR A 252 -1 O LYS A 247 N ASP A 242 SHEET 1 AA7 4 ALA A 264 SER A 267 0 SHEET 2 AA7 4 TRP A 273 SER A 276 -1 O TRP A 273 N SER A 267 SHEET 3 AA7 4 VAL A 283 ASN A 287 -1 O TYR A 284 N SER A 276 SHEET 4 AA7 4 ILE A 293 LEU A 297 -1 O VAL A 294 N ILE A 285 SHEET 1 AA8 4 ALA B 36 LEU B 41 0 SHEET 2 AA8 4 ILE B 327 LYS B 331 -1 O ILE B 327 N LEU B 41 SHEET 3 AA8 4 ILE B 315 ALA B 320 -1 N ILE B 316 O TRP B 330 SHEET 4 AA8 4 VAL B 304 CYS B 309 -1 N ALA B 308 O ALA B 317 SHEET 1 AA9 4 VAL B 48 PHE B 53 0 SHEET 2 AA9 4 TRP B 59 SER B 64 -1 O SER B 63 N SER B 49 SHEET 3 AA9 4 LEU B 68 GLY B 73 -1 O TRP B 72 N LEU B 60 SHEET 4 AA9 4 PHE B 79 SER B 84 -1 O ILE B 83 N ILE B 69 SHEET 1 AB1 4 ILE B 90 TRP B 95 0 SHEET 2 AB1 4 LEU B 101 SER B 106 -1 O ALA B 105 N SER B 91 SHEET 3 AB1 4 THR B 110 ASP B 115 -1 O TRP B 114 N LEU B 102 SHEET 4 AB1 4 CYS B 121 LYS B 126 -1 O LEU B 125 N LEU B 111 SHEET 1 AB2 4 VAL B 132 PHE B 137 0 SHEET 2 AB2 4 LEU B 143 SER B 148 -1 O VAL B 145 N ASN B 136 SHEET 3 AB2 4 VAL B 153 ASP B 157 -1 O TRP B 156 N ILE B 144 SHEET 4 AB2 4 CYS B 163 LEU B 167 -1 O LEU B 167 N VAL B 153 SHEET 1 AB3 4 VAL B 174 PHE B 179 0 SHEET 2 AB3 4 LEU B 185 SER B 190 -1 O VAL B 187 N HIS B 178 SHEET 3 AB3 4 CYS B 195 ASP B 199 -1 O TRP B 198 N ILE B 186 SHEET 4 AB3 4 CYS B 205 LEU B 209 -1 O LEU B 206 N ILE B 197 SHEET 1 AB4 4 VAL B 217 PHE B 222 0 SHEET 2 AB4 4 TYR B 228 THR B 233 -1 O LEU B 230 N LYS B 221 SHEET 3 AB4 4 THR B 237 ASP B 242 -1 O TRP B 241 N ILE B 229 SHEET 4 AB4 4 LYS B 247 TYR B 252 -1 O LEU B 249 N LEU B 240 SHEET 1 AB5 4 ALA B 264 SER B 267 0 SHEET 2 AB5 4 TRP B 273 SER B 276 -1 O TRP B 273 N SER B 267 SHEET 3 AB5 4 VAL B 283 ASN B 287 -1 O TYR B 284 N SER B 276 SHEET 4 AB5 4 ILE B 293 LEU B 297 -1 O VAL B 294 N ILE B 285 SITE 1 AC1 13 SER A 223 PRO A 224 ASN A 225 TYR A 228 SITE 2 AC1 13 LYS A 250 PHE A 266 SER A 267 LYS A 272 SITE 3 AC1 13 TRP A 273 LEU A 288 GLN A 289 HOH A 676 SITE 4 AC1 13 HOH B 503 SITE 1 AC2 13 ASP A 76 SER B 223 PRO B 224 ASN B 225 SITE 2 AC2 13 TYR B 228 PHE B 266 SER B 267 VAL B 268 SITE 3 AC2 13 LYS B 272 TRP B 273 LEU B 288 HOH B 593 SITE 4 AC2 13 HOH B 777 CRYST1 47.265 46.812 68.797 89.21 87.78 75.17 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021157 -0.005600 -0.000798 0.00000 SCALE2 0.000000 0.022098 -0.000088 0.00000 SCALE3 0.000000 0.000000 0.014547 0.00000