HEADER TRANSFERASE/DNA 06-SEP-19 6U8W TITLE CRYSTAL STRUCTURE OF DNMT3B(K777A)-DNMT3L IN COMPLEX WITH CPGPT DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 3B; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: DNMT3B,DNA METHYLTRANSFERASE HSAIIIB,M.HSAIIIB; COMPND 5 EC: 2.1.1.37; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (CYTOSINE-5)-METHYLTRANSFERASE 3-LIKE; COMPND 10 CHAIN: B, C; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: CPGPT DNA (25-MER); COMPND 14 CHAIN: E, F; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DNMT3B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: DE3; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: DNMT3L; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 16 EXPRESSION_SYSTEM_VARIANT: DE3; SOURCE 17 MOL_ID: 3; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 20 ORGANISM_COMMON: HUMAN; SOURCE 21 ORGANISM_TAXID: 9606 KEYWDS DNMT3B, DNMT3L, DNA METHYLATION, METHYLTRANSFERASE, TRANSFERASE-DNA KEYWDS 2 COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.GAO,Z.M.ZHANG,J.SONG REVDAT 4 25-DEC-24 6U8W 1 REMARK LINK REVDAT 3 11-OCT-23 6U8W 1 REMARK REVDAT 2 15-JUL-20 6U8W 1 JRNL REVDAT 1 10-JUN-20 6U8W 0 JRNL AUTH L.GAO,M.EMPERLE,Y.GUO,S.A.GRIMM,W.REN,S.ADAM,H.URYU, JRNL AUTH 2 Z.M.ZHANG,D.CHEN,J.YIN,M.DUKATZ,H.ANTENEH,R.Z.JURKOWSKA, JRNL AUTH 3 J.LU,Y.WANG,P.BASHTRYKOV,P.A.WADE,G.G.WANG,A.JELTSCH,J.SONG JRNL TITL COMPREHENSIVE STRUCTURE-FUNCTION CHARACTERIZATION OF DNMT3B JRNL TITL 2 AND DNMT3A REVEALS DISTINCTIVE DE NOVO DNA METHYLATION JRNL TITL 3 MECHANISMS. JRNL REF NAT COMMUN V. 11 3355 2020 JRNL REFN ESSN 2041-1723 JRNL PMID 32620778 JRNL DOI 10.1038/S41467-020-17109-4 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.963 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 43857 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.508 REMARK 3 FREE R VALUE TEST SET COUNT : 1977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3765 - 7.1003 0.99 2975 142 0.1850 0.2274 REMARK 3 2 7.1003 - 5.6385 1.00 3019 133 0.2080 0.2110 REMARK 3 3 5.6385 - 4.9266 1.00 2985 146 0.1873 0.2289 REMARK 3 4 4.9266 - 4.4765 1.00 3001 146 0.1842 0.1826 REMARK 3 5 4.4765 - 4.1558 1.00 2981 140 0.1738 0.1900 REMARK 3 6 4.1558 - 3.9109 1.00 3014 152 0.2092 0.2212 REMARK 3 7 3.9109 - 3.7151 1.00 2997 134 0.2140 0.2234 REMARK 3 8 3.7151 - 3.5535 1.00 2994 140 0.2403 0.2282 REMARK 3 9 3.5535 - 3.4167 1.00 3047 148 0.2648 0.3147 REMARK 3 10 3.4167 - 3.2988 1.00 2930 134 0.2661 0.2815 REMARK 3 11 3.2988 - 3.1957 1.00 3010 140 0.2870 0.3269 REMARK 3 12 3.1957 - 3.1044 1.00 2976 142 0.2959 0.3145 REMARK 3 13 3.1044 - 3.0226 0.99 2967 138 0.3156 0.3617 REMARK 3 14 3.0226 - 2.9489 0.99 2984 142 0.3912 0.4400 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.458 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.431 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 76.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 99.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 8752 REMARK 3 ANGLE : 0.685 12130 REMARK 3 CHIRALITY : 0.042 1325 REMARK 3 PLANARITY : 0.005 1393 REMARK 3 DIHEDRAL : 24.235 3175 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6U8W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1000243381. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9774 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43944 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.949 REMARK 200 RESOLUTION RANGE LOW (A) : 48.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.73300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.340 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5YX2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 71.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL (PH 8.0), 200 MM MGCL2, REMARK 280 8% PEG 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.62300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.24600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 178 REMARK 465 ASN B 319 REMARK 465 SER B 352 REMARK 465 SER B 353 REMARK 465 LYS B 354 REMARK 465 LEU B 355 REMARK 465 ALA B 356 REMARK 465 ALA B 357 REMARK 465 LYS B 358 REMARK 465 TRP B 359 REMARK 465 THR B 380 REMARK 465 GLU B 381 REMARK 465 LEU B 382 REMARK 465 THR B 383 REMARK 465 SER B 384 REMARK 465 SER B 385 REMARK 465 LEU B 386 REMARK 465 MET C 178 REMARK 465 ASP C 311 REMARK 465 VAL C 312 REMARK 465 HIS C 313 REMARK 465 GLY C 314 REMARK 465 GLY C 315 REMARK 465 SER C 316 REMARK 465 LEU C 317 REMARK 465 GLN C 318 REMARK 465 ASN C 319 REMARK 465 GLN C 348 REMARK 465 ASN C 349 REMARK 465 LYS C 350 REMARK 465 GLN C 351 REMARK 465 SER C 352 REMARK 465 SER C 353 REMARK 465 LYS C 354 REMARK 465 LEU C 355 REMARK 465 ALA C 356 REMARK 465 ALA C 357 REMARK 465 LYS C 358 REMARK 465 TRP C 359 REMARK 465 THR C 380 REMARK 465 GLU C 381 REMARK 465 LEU C 382 REMARK 465 THR C 383 REMARK 465 SER C 384 REMARK 465 SER C 385 REMARK 465 LEU C 386 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 563 CG CD1 CD2 REMARK 470 ARG A 571 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 573 CZ NH1 NH2 REMARK 470 LYS A 633 CG CD CE NZ REMARK 470 LYS A 634 CG CD CE NZ REMARK 470 LYS A 662 NZ REMARK 470 LYS A 685 CG CD CE NZ REMARK 470 LYS A 725 CD CE NZ REMARK 470 LYS A 750 CD CE NZ REMARK 470 LYS A 769 NZ REMARK 470 LYS A 785 CD CE NZ REMARK 470 LEU A 788 CG CD1 CD2 REMARK 470 LYS A 796 CE NZ REMARK 470 GLU A 853 CG CD OE1 OE2 REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 470 LYS B 200 CG CD CE NZ REMARK 470 LYS B 201 CG CD CE NZ REMARK 470 LEU B 206 CD1 CD2 REMARK 470 GLU B 210 CG CD OE1 OE2 REMARK 470 SER B 211 OG REMARK 470 SER B 213 OG REMARK 470 ASP B 214 CG OD1 OD2 REMARK 470 GLN B 217 CD OE1 NE2 REMARK 470 ASP B 223 CG OD1 OD2 REMARK 470 LYS B 230 CG CD CE NZ REMARK 470 GLU B 234 CD OE1 OE2 REMARK 470 LEU B 248 CG CD1 CD2 REMARK 470 HIS B 250 CG ND1 CD2 CE1 NE2 REMARK 470 THR B 251 OG1 CG2 REMARK 470 LYS B 273 CG CD CE NZ REMARK 470 SER B 276 CB OG REMARK 470 ARG B 278 CB CG CD NE CZ NH1 NH2 REMARK 470 ASN B 287 CG OD1 ND2 REMARK 470 LEU B 288 CG CD1 CD2 REMARK 470 LYS B 292 CG CD CE NZ REMARK 470 GLU B 293 CG CD OE1 OE2 REMARK 470 ASP B 311 CG OD1 OD2 REMARK 470 VAL B 312 CG1 CG2 REMARK 470 HIS B 313 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 316 OG REMARK 470 LEU B 317 CG CD1 CD2 REMARK 470 GLN B 318 CG CD OE1 NE2 REMARK 470 ARG B 331 CG CD NE CZ NH1 NH2 REMARK 470 SER B 332 OG REMARK 470 ARG B 333 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 334 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 337 CG CD1 CD2 REMARK 470 VAL B 338 CG1 CG2 REMARK 470 SER B 339 OG REMARK 470 GLU B 340 CG CD OE1 OE2 REMARK 470 GLU B 341 CG CD OE1 OE2 REMARK 470 GLU B 342 CG CD OE1 OE2 REMARK 470 LEU B 343 CG CD1 CD2 REMARK 470 LEU B 345 CG CD1 CD2 REMARK 470 ASN B 349 OD1 ND2 REMARK 470 LYS B 350 CG CD CE NZ REMARK 470 GLN B 351 CG CD OE1 NE2 REMARK 470 THR B 361 OG1 CG2 REMARK 470 LYS B 362 CG CD CE NZ REMARK 470 LEU B 363 CG CD1 CD2 REMARK 470 VAL B 364 CG1 CG2 REMARK 470 LYS B 365 CG CD CE NZ REMARK 470 ASN B 366 CG OD1 ND2 REMARK 470 CYS B 367 CB SG REMARK 470 LEU B 369 CB CG CD1 CD2 REMARK 470 GLU B 373 CG CD OE1 OE2 REMARK 470 LYS B 376 CG CD CE NZ REMARK 470 PHE C 179 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU C 180 CG CD OE1 OE2 REMARK 470 ASP C 198 CB CG OD1 OD2 REMARK 470 LYS C 200 CG CD CE NZ REMARK 470 LYS C 201 CG CD CE NZ REMARK 470 GLU C 202 CG CD OE1 OE2 REMARK 470 GLU C 210 CG CD OE1 OE2 REMARK 470 SER C 213 OG REMARK 470 ASP C 214 CG OD1 OD2 REMARK 470 VAL C 221 CG1 CG2 REMARK 470 VAL C 222 CG1 CG2 REMARK 470 LYS C 230 CG CD CE NZ REMARK 470 GLU C 234 CD OE1 OE2 REMARK 470 LEU C 248 CG CD1 CD2 REMARK 470 HIS C 250 CG ND1 CD2 CE1 NE2 REMARK 470 THR C 251 OG1 CG2 REMARK 470 ASP C 253 CG OD1 OD2 REMARK 470 LYS C 273 CG CD CE NZ REMARK 470 SER C 276 OG REMARK 470 ARG C 278 CB CG CD NE CZ NH1 NH2 REMARK 470 LEU C 288 CG CD1 CD2 REMARK 470 LYS C 292 CE NZ REMARK 470 GLU C 293 CG CD OE1 OE2 REMARK 470 ARG C 331 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 333 CG CD NE CZ NH1 NH2 REMARK 470 LEU C 337 CG CD1 CD2 REMARK 470 GLU C 340 CG CD OE1 OE2 REMARK 470 GLU C 341 CD OE1 OE2 REMARK 470 GLU C 342 CG CD OE1 OE2 REMARK 470 LEU C 343 CG CD1 CD2 REMARK 470 LEU C 345 CG CD1 CD2 REMARK 470 LEU C 346 CG CD1 CD2 REMARK 470 THR C 361 OG1 CG2 REMARK 470 LYS C 362 CG CD CE NZ REMARK 470 LEU C 363 CG CD1 CD2 REMARK 470 VAL C 364 CG1 CG2 REMARK 470 LYS C 365 CG CD CE NZ REMARK 470 ASN C 366 CG OD1 ND2 REMARK 470 CYS C 367 CB SG REMARK 470 LEU C 369 CG CD1 CD2 REMARK 470 LEU C 371 CB CG CD1 CD2 REMARK 470 LYS C 376 CG CD CE NZ REMARK 470 LEU D 563 CG CD1 CD2 REMARK 470 ARG D 571 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 573 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 633 CG CD CE NZ REMARK 470 LYS D 634 NZ REMARK 470 LYS D 662 NZ REMARK 470 LYS D 685 CG CD CE NZ REMARK 470 GLU D 686 CG CD OE1 OE2 REMARK 470 LYS D 785 CD CE NZ REMARK 470 LYS D 796 CE NZ REMARK 470 LYS D 828 CE NZ REMARK 470 LYS D 847 NZ REMARK 470 GLU D 853 CG CD OE1 OE2 REMARK 470 DG E 422 O5' REMARK 470 DG F 422 O5' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 SG CYS D 651 C6 PYO E 427 1.85 REMARK 500 SG CYS A 651 C6 PYO F 427 1.86 REMARK 500 O LEU A 754 NZ LYS A 770 2.17 REMARK 500 OG SER C 194 O GLU C 197 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 626 -162.36 -10.96 REMARK 500 ASP A 627 134.28 -25.55 REMARK 500 ASP A 689 48.16 -91.27 REMARK 500 PHE B 196 -12.16 72.34 REMARK 500 VAL B 222 -53.52 -125.70 REMARK 500 MET B 304 137.28 -170.91 REMARK 500 PRO B 370 45.45 -76.21 REMARK 500 PHE C 196 -6.62 74.00 REMARK 500 ARG C 333 -160.20 -128.89 REMARK 500 HIS C 334 131.79 -34.47 REMARK 500 ASN D 626 -160.50 -20.66 REMARK 500 ASP D 627 132.53 -24.57 REMARK 500 ALA D 660 31.93 -97.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 VAL A 625 ASN A 626 -147.61 REMARK 500 VAL D 625 ASN D 626 -145.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAH D 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG E 426 and PYO REMARK 800 E 427 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide PYO E 427 and CYS D REMARK 800 651 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide PYO E 427 and DG REMARK 800 E 428 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide DG F 426 and PYO REMARK 800 F 427 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-nucleotide PYO F 427 and DG REMARK 800 F 428 DBREF 6U8W A 563 853 UNP Q9UBC3 DNM3B_HUMAN 563 853 DBREF 6U8W B 178 386 UNP Q9UJW3 DNM3L_HUMAN 178 386 DBREF 6U8W C 178 386 UNP Q9UJW3 DNM3L_HUMAN 178 386 DBREF 6U8W D 563 853 UNP Q9UBC3 DNM3B_HUMAN 563 853 DBREF 6U8W E 422 446 PDB 6U8W 6U8W 422 446 DBREF 6U8W F 422 446 PDB 6U8W 6U8W 422 446 SEQADV 6U8W ALA A 777 UNP Q9UBC3 LYS 777 ENGINEERED MUTATION SEQADV 6U8W ALA D 777 UNP Q9UBC3 LYS 777 ENGINEERED MUTATION SEQRES 1 A 291 LEU TYR PRO ALA ILE PRO ALA ALA ARG ARG ARG PRO ILE SEQRES 2 A 291 ARG VAL LEU SER LEU PHE ASP GLY ILE ALA THR GLY TYR SEQRES 3 A 291 LEU VAL LEU LYS GLU LEU GLY ILE LYS VAL GLY LYS TYR SEQRES 4 A 291 VAL ALA SER GLU VAL CYS GLU GLU SER ILE ALA VAL GLY SEQRES 5 A 291 THR VAL LYS HIS GLU GLY ASN ILE LYS TYR VAL ASN ASP SEQRES 6 A 291 VAL ARG ASN ILE THR LYS LYS ASN ILE GLU GLU TRP GLY SEQRES 7 A 291 PRO PHE ASP LEU VAL ILE GLY GLY SER PRO CYS ASN ASP SEQRES 8 A 291 LEU SER ASN VAL ASN PRO ALA ARG LYS GLY LEU TYR GLU SEQRES 9 A 291 GLY THR GLY ARG LEU PHE PHE GLU PHE TYR HIS LEU LEU SEQRES 10 A 291 ASN TYR SER ARG PRO LYS GLU GLY ASP ASP ARG PRO PHE SEQRES 11 A 291 PHE TRP MET PHE GLU ASN VAL VAL ALA MET LYS VAL GLY SEQRES 12 A 291 ASP LYS ARG ASP ILE SER ARG PHE LEU GLU CYS ASN PRO SEQRES 13 A 291 VAL MET ILE ASP ALA ILE LYS VAL SER ALA ALA HIS ARG SEQRES 14 A 291 ALA ARG TYR PHE TRP GLY ASN LEU PRO GLY MET ASN ARG SEQRES 15 A 291 PRO VAL ILE ALA SER LYS ASN ASP LYS LEU GLU LEU GLN SEQRES 16 A 291 ASP CYS LEU GLU TYR ASN ARG ILE ALA LYS LEU LYS LYS SEQRES 17 A 291 VAL GLN THR ILE THR THR ALA SER ASN SER ILE LYS GLN SEQRES 18 A 291 GLY LYS ASN GLN LEU PHE PRO VAL VAL MET ASN GLY LYS SEQRES 19 A 291 GLU ASP VAL LEU TRP CYS THR GLU LEU GLU ARG ILE PHE SEQRES 20 A 291 GLY PHE PRO VAL HIS TYR THR ASP VAL SER ASN MET GLY SEQRES 21 A 291 ARG GLY ALA ARG GLN LYS LEU LEU GLY ARG SER TRP SER SEQRES 22 A 291 VAL PRO VAL ILE ARG HIS LEU PHE ALA PRO LEU LYS ASP SEQRES 23 A 291 TYR PHE ALA CYS GLU SEQRES 1 B 209 MET PHE GLU THR VAL PRO VAL TRP ARG ARG GLN PRO VAL SEQRES 2 B 209 ARG VAL LEU SER LEU PHE GLU ASP ILE LYS LYS GLU LEU SEQRES 3 B 209 THR SER LEU GLY PHE LEU GLU SER GLY SER ASP PRO GLY SEQRES 4 B 209 GLN LEU LYS HIS VAL VAL ASP VAL THR ASP THR VAL ARG SEQRES 5 B 209 LYS ASP VAL GLU GLU TRP GLY PRO PHE ASP LEU VAL TYR SEQRES 6 B 209 GLY ALA THR PRO PRO LEU GLY HIS THR CYS ASP ARG PRO SEQRES 7 B 209 PRO SER TRP TYR LEU PHE GLN PHE HIS ARG LEU LEU GLN SEQRES 8 B 209 TYR ALA ARG PRO LYS PRO GLY SER PRO ARG PRO PHE PHE SEQRES 9 B 209 TRP MET PHE VAL ASP ASN LEU VAL LEU ASN LYS GLU ASP SEQRES 10 B 209 LEU ASP VAL ALA SER ARG PHE LEU GLU MET GLU PRO VAL SEQRES 11 B 209 THR ILE PRO ASP VAL HIS GLY GLY SER LEU GLN ASN ALA SEQRES 12 B 209 VAL ARG VAL TRP SER ASN ILE PRO ALA ILE ARG SER ARG SEQRES 13 B 209 HIS TRP ALA LEU VAL SER GLU GLU GLU LEU SER LEU LEU SEQRES 14 B 209 ALA GLN ASN LYS GLN SER SER LYS LEU ALA ALA LYS TRP SEQRES 15 B 209 PRO THR LYS LEU VAL LYS ASN CYS PHE LEU PRO LEU ARG SEQRES 16 B 209 GLU TYR PHE LYS TYR PHE SER THR GLU LEU THR SER SER SEQRES 17 B 209 LEU SEQRES 1 C 209 MET PHE GLU THR VAL PRO VAL TRP ARG ARG GLN PRO VAL SEQRES 2 C 209 ARG VAL LEU SER LEU PHE GLU ASP ILE LYS LYS GLU LEU SEQRES 3 C 209 THR SER LEU GLY PHE LEU GLU SER GLY SER ASP PRO GLY SEQRES 4 C 209 GLN LEU LYS HIS VAL VAL ASP VAL THR ASP THR VAL ARG SEQRES 5 C 209 LYS ASP VAL GLU GLU TRP GLY PRO PHE ASP LEU VAL TYR SEQRES 6 C 209 GLY ALA THR PRO PRO LEU GLY HIS THR CYS ASP ARG PRO SEQRES 7 C 209 PRO SER TRP TYR LEU PHE GLN PHE HIS ARG LEU LEU GLN SEQRES 8 C 209 TYR ALA ARG PRO LYS PRO GLY SER PRO ARG PRO PHE PHE SEQRES 9 C 209 TRP MET PHE VAL ASP ASN LEU VAL LEU ASN LYS GLU ASP SEQRES 10 C 209 LEU ASP VAL ALA SER ARG PHE LEU GLU MET GLU PRO VAL SEQRES 11 C 209 THR ILE PRO ASP VAL HIS GLY GLY SER LEU GLN ASN ALA SEQRES 12 C 209 VAL ARG VAL TRP SER ASN ILE PRO ALA ILE ARG SER ARG SEQRES 13 C 209 HIS TRP ALA LEU VAL SER GLU GLU GLU LEU SER LEU LEU SEQRES 14 C 209 ALA GLN ASN LYS GLN SER SER LYS LEU ALA ALA LYS TRP SEQRES 15 C 209 PRO THR LYS LEU VAL LYS ASN CYS PHE LEU PRO LEU ARG SEQRES 16 C 209 GLU TYR PHE LYS TYR PHE SER THR GLU LEU THR SER SER SEQRES 17 C 209 LEU SEQRES 1 D 291 LEU TYR PRO ALA ILE PRO ALA ALA ARG ARG ARG PRO ILE SEQRES 2 D 291 ARG VAL LEU SER LEU PHE ASP GLY ILE ALA THR GLY TYR SEQRES 3 D 291 LEU VAL LEU LYS GLU LEU GLY ILE LYS VAL GLY LYS TYR SEQRES 4 D 291 VAL ALA SER GLU VAL CYS GLU GLU SER ILE ALA VAL GLY SEQRES 5 D 291 THR VAL LYS HIS GLU GLY ASN ILE LYS TYR VAL ASN ASP SEQRES 6 D 291 VAL ARG ASN ILE THR LYS LYS ASN ILE GLU GLU TRP GLY SEQRES 7 D 291 PRO PHE ASP LEU VAL ILE GLY GLY SER PRO CYS ASN ASP SEQRES 8 D 291 LEU SER ASN VAL ASN PRO ALA ARG LYS GLY LEU TYR GLU SEQRES 9 D 291 GLY THR GLY ARG LEU PHE PHE GLU PHE TYR HIS LEU LEU SEQRES 10 D 291 ASN TYR SER ARG PRO LYS GLU GLY ASP ASP ARG PRO PHE SEQRES 11 D 291 PHE TRP MET PHE GLU ASN VAL VAL ALA MET LYS VAL GLY SEQRES 12 D 291 ASP LYS ARG ASP ILE SER ARG PHE LEU GLU CYS ASN PRO SEQRES 13 D 291 VAL MET ILE ASP ALA ILE LYS VAL SER ALA ALA HIS ARG SEQRES 14 D 291 ALA ARG TYR PHE TRP GLY ASN LEU PRO GLY MET ASN ARG SEQRES 15 D 291 PRO VAL ILE ALA SER LYS ASN ASP LYS LEU GLU LEU GLN SEQRES 16 D 291 ASP CYS LEU GLU TYR ASN ARG ILE ALA LYS LEU LYS LYS SEQRES 17 D 291 VAL GLN THR ILE THR THR ALA SER ASN SER ILE LYS GLN SEQRES 18 D 291 GLY LYS ASN GLN LEU PHE PRO VAL VAL MET ASN GLY LYS SEQRES 19 D 291 GLU ASP VAL LEU TRP CYS THR GLU LEU GLU ARG ILE PHE SEQRES 20 D 291 GLY PHE PRO VAL HIS TYR THR ASP VAL SER ASN MET GLY SEQRES 21 D 291 ARG GLY ALA ARG GLN LYS LEU LEU GLY ARG SER TRP SER SEQRES 22 D 291 VAL PRO VAL ILE ARG HIS LEU PHE ALA PRO LEU LYS ASP SEQRES 23 D 291 TYR PHE ALA CYS GLU SEQRES 1 E 25 DG DC DA DT DG PYO DG DT DT DC DT DA DA SEQRES 2 E 25 DT DT DA DG DA DA DC DG DC DA DT DG SEQRES 1 F 25 DG DC DA DT DG PYO DG DT DT DC DT DA DA SEQRES 2 F 25 DT DT DA DG DA DA DC DG DC DA DT DG HET PYO E 427 19 HET PYO F 427 19 HET SAH A 901 26 HET MG A 902 1 HET SAH D 901 26 HET MG D 902 1 HETNAM PYO 1-(BETA-D-RIBOFURANOSYL)-PYRIMIDIN-2-ONE-5'-PHOSPHATE HETNAM SAH S-ADENOSYL-L-HOMOCYSTEINE HETNAM MG MAGNESIUM ION FORMUL 5 PYO 2(C9 H13 N2 O8 P) FORMUL 7 SAH 2(C14 H20 N6 O5 S) FORMUL 8 MG 2(MG 2+) FORMUL 11 HOH *11(H2 O) HELIX 1 AA1 ALA A 585 LEU A 594 1 10 HELIX 2 AA2 CYS A 607 GLU A 619 1 13 HELIX 3 AA3 ASP A 627 ILE A 631 5 5 HELIX 4 AA4 THR A 632 GLY A 640 1 9 HELIX 5 AA5 GLU A 666 ARG A 670 5 5 HELIX 6 AA6 LEU A 671 ARG A 683 1 13 HELIX 7 AA7 LYS A 703 GLU A 715 1 13 HELIX 8 AA8 ILE A 724 VAL A 726 5 3 HELIX 9 AA9 GLU A 755 CYS A 759 5 5 HELIX 10 AB1 ALA A 777 LYS A 782 5 6 HELIX 11 AB2 TRP A 801 GLY A 810 1 10 HELIX 12 AB3 GLY A 822 ARG A 832 1 11 HELIX 13 AB4 SER A 835 ALA A 844 1 10 HELIX 14 AB5 PRO A 845 TYR A 849 5 5 HELIX 15 AB6 PRO B 183 ARG B 187 5 5 HELIX 16 AB7 ILE B 199 GLY B 207 1 9 HELIX 17 AB8 ASP B 223 THR B 227 5 5 HELIX 18 AB9 VAL B 228 TRP B 235 1 8 HELIX 19 AC1 SER B 257 ARG B 271 1 15 HELIX 20 AC2 ASN B 291 GLU B 303 1 13 HELIX 21 AC3 ILE B 327 SER B 332 5 6 HELIX 22 AC4 SER B 339 LEU B 346 1 8 HELIX 23 AC5 ALA B 347 GLN B 351 5 5 HELIX 24 AC6 THR B 361 LEU B 369 1 9 HELIX 25 AC7 PRO B 370 ARG B 372 5 3 HELIX 26 AC8 PRO C 183 ARG C 187 5 5 HELIX 27 AC9 ILE C 199 LEU C 206 1 8 HELIX 28 AD1 ASP C 214 GLY C 216 5 3 HELIX 29 AD2 VAL C 228 TRP C 235 1 8 HELIX 30 AD3 SER C 257 ARG C 271 1 15 HELIX 31 AD4 ASN C 291 LEU C 302 1 12 HELIX 32 AD5 ILE C 327 ARG C 331 5 5 HELIX 33 AD6 SER C 339 ALA C 347 1 9 HELIX 34 AD7 LEU C 363 PHE C 375 5 13 HELIX 35 AD8 PRO D 568 ARG D 572 5 5 HELIX 36 AD9 ALA D 585 GLY D 595 1 11 HELIX 37 AE1 CYS D 607 GLU D 619 1 13 HELIX 38 AE2 ASP D 627 ILE D 631 5 5 HELIX 39 AE3 THR D 632 GLY D 640 1 9 HELIX 40 AE4 ARG D 670 ARG D 683 1 14 HELIX 41 AE5 LYS D 703 GLU D 715 1 13 HELIX 42 AE6 ILE D 724 VAL D 726 5 3 HELIX 43 AE7 GLU D 755 CYS D 759 5 5 HELIX 44 AE8 TRP D 801 GLY D 810 1 10 HELIX 45 AE9 GLY D 822 ARG D 832 1 11 HELIX 46 AF1 SER D 835 ALA D 844 1 10 HELIX 47 AF2 PRO D 845 TYR D 849 5 5 SHEET 1 AA1 7 ILE A 622 TYR A 624 0 SHEET 2 AA1 7 VAL A 598 SER A 604 1 N ALA A 603 O LYS A 623 SHEET 3 AA1 7 ILE A 575 LEU A 580 1 N VAL A 577 O LYS A 600 SHEET 4 AA1 7 LEU A 644 GLY A 648 1 O LEU A 644 N LEU A 578 SHEET 5 AA1 7 PHE A 693 VAL A 699 1 O MET A 695 N VAL A 645 SHEET 6 AA1 7 ALA A 732 GLY A 737 -1 O TRP A 736 N PHE A 696 SHEET 7 AA1 7 VAL A 719 ASP A 722 -1 N ILE A 721 O ARG A 733 SHEET 1 AA2 3 ILE A 765 ALA A 766 0 SHEET 2 AA2 3 VAL A 791 MET A 793 -1 O VAL A 792 N ILE A 765 SHEET 3 AA2 3 LYS A 796 ASP A 798 -1 O LYS A 796 N MET A 793 SHEET 1 AA3 6 LEU B 218 VAL B 221 0 SHEET 2 AA3 6 VAL B 192 LEU B 195 1 N SER B 194 O LYS B 219 SHEET 3 AA3 6 LEU B 240 ALA B 244 1 O TYR B 242 N LEU B 193 SHEET 4 AA3 6 PHE B 281 ASP B 286 1 O MET B 283 N GLY B 243 SHEET 5 AA3 6 VAL B 321 SER B 325 -1 O TRP B 324 N PHE B 284 SHEET 6 AA3 6 VAL B 307 ILE B 309 -1 N VAL B 307 O VAL B 323 SHEET 1 AA4 6 LEU C 218 VAL C 221 0 SHEET 2 AA4 6 VAL C 192 LEU C 195 1 N SER C 194 O LYS C 219 SHEET 3 AA4 6 LEU C 240 ALA C 244 1 O TYR C 242 N LEU C 193 SHEET 4 AA4 6 PHE C 281 ASP C 286 1 O MET C 283 N GLY C 243 SHEET 5 AA4 6 VAL C 321 SER C 325 -1 O TRP C 324 N PHE C 284 SHEET 6 AA4 6 VAL C 307 ILE C 309 -1 N VAL C 307 O VAL C 323 SHEET 1 AA5 7 LYS D 623 TYR D 624 0 SHEET 2 AA5 7 VAL D 598 SER D 604 1 N ALA D 603 O LYS D 623 SHEET 3 AA5 7 ILE D 575 LEU D 580 1 N VAL D 577 O LYS D 600 SHEET 4 AA5 7 LEU D 644 GLY D 648 1 O ILE D 646 N LEU D 580 SHEET 5 AA5 7 PHE D 693 VAL D 699 1 O GLU D 697 N GLY D 647 SHEET 6 AA5 7 ALA D 732 GLY D 737 -1 O TRP D 736 N PHE D 696 SHEET 7 AA5 7 ILE D 721 ASP D 722 -1 N ILE D 721 O ARG D 733 SHEET 1 AA6 3 ILE D 765 ALA D 766 0 SHEET 2 AA6 3 VAL D 791 MET D 793 -1 O VAL D 792 N ILE D 765 SHEET 3 AA6 3 LYS D 796 ASP D 798 -1 O ASP D 798 N VAL D 791 LINK O3' DG E 426 P PYO E 427 1555 1555 1.61 LINK O3' PYO E 427 P DG E 428 1555 1555 1.61 LINK O3' DG F 426 P PYO F 427 1555 1555 1.61 LINK O3' PYO F 427 P DG F 428 1555 1555 1.61 CISPEP 1 GLY A 640 PRO A 641 0 -0.95 CISPEP 2 GLY D 640 PRO D 641 0 1.68 SITE 1 AC1 16 PHE A 581 ASP A 582 GLY A 583 ILE A 584 SITE 2 AC1 16 THR A 586 SER A 604 GLU A 605 VAL A 606 SITE 3 AC1 16 CYS A 607 ASP A 627 VAL A 628 GLY A 648 SITE 4 AC1 16 LEU A 671 ARG A 832 SER A 833 TRP A 834 SITE 1 AC2 3 ASN A 717 GLY A 737 MET A 742 SITE 1 AC3 14 PHE D 581 ASP D 582 GLY D 583 ILE D 584 SITE 2 AC3 14 THR D 586 SER D 604 GLU D 605 CYS D 607 SITE 3 AC3 14 ASP D 627 VAL D 628 GLY D 648 ARG D 832 SITE 4 AC3 14 SER D 833 TRP D 834 SITE 1 AC4 4 CYS D 716 ASN D 717 GLY D 737 MET D 742 SITE 1 AC5 15 SER D 649 CYS D 651 SER D 655 GLU D 697 SITE 2 AC5 15 VAL D 699 ARG D 731 ARG D 733 GLN D 772 SITE 3 AC5 15 THR D 773 GLY D 831 ARG D 832 DT E 425 SITE 4 AC5 15 DG E 428 DG F 442 DC F 443 SITE 1 AC6 16 SER D 649 PRO D 650 ASN D 652 ASP D 653 SITE 2 AC6 16 LEU D 654 SER D 655 GLU D 697 ASN D 698 SITE 3 AC6 16 VAL D 699 ARG D 731 ARG D 733 THR D 773 SITE 4 AC6 16 GLY D 831 ARG D 832 DG E 426 DG E 428 SITE 1 AC7 19 SER D 649 CYS D 651 ASN D 652 SER D 655 SITE 2 AC7 19 VAL D 657 ASN D 658 GLU D 697 VAL D 699 SITE 3 AC7 19 ARG D 731 ARG D 733 THR D 773 THR D 776 SITE 4 AC7 19 ASN D 779 GLY D 831 ARG D 832 DG E 426 SITE 5 AC7 19 DT E 429 DC F 441 DG F 442 SITE 1 AC8 16 SER A 649 CYS A 651 SER A 655 VAL A 657 SITE 2 AC8 16 GLU A 697 VAL A 699 ARG A 731 ARG A 733 SITE 3 AC8 16 GLN A 772 THR A 773 GLY A 831 ARG A 832 SITE 4 AC8 16 DG E 442 DC E 443 DT F 425 DG F 428 SITE 1 AC9 17 SER A 649 CYS A 651 SER A 655 VAL A 657 SITE 2 AC9 17 ASN A 658 GLU A 697 VAL A 699 ARG A 731 SITE 3 AC9 17 ARG A 733 THR A 773 THR A 776 ASN A 779 SITE 4 AC9 17 GLY A 831 ARG A 832 DC E 441 DG F 426 SITE 5 AC9 17 DT F 429 CRYST1 193.506 193.506 49.869 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005168 0.002984 0.000000 0.00000 SCALE2 0.000000 0.005967 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020053 0.00000 TER 2299 GLU A 853 TER 3704 SER B 379 TER 5048 SER C 379 TER 7350 GLU D 853 HETATM 7451 P PYO E 427 51.890 46.221 17.723 1.00 89.75 P HETATM 7452 OP1 PYO E 427 52.873 45.231 17.088 1.00 85.90 O HETATM 7453 OP2 PYO E 427 52.437 47.400 18.545 1.00 87.33 O HETATM 7454 O5' PYO E 427 50.962 46.813 16.574 1.00 99.61 O HETATM 7455 C5' PYO E 427 50.510 46.001 15.499 1.00 90.85 C HETATM 7456 C4' PYO E 427 50.110 46.851 14.320 1.00 88.29 C HETATM 7457 O4' PYO E 427 51.276 47.457 13.736 1.00 87.09 O HETATM 7458 C3' PYO E 427 49.454 46.134 13.147 1.00 95.52 C HETATM 7459 C1' PYO E 427 50.951 47.892 12.444 1.00 85.06 C HETATM 7460 O3' PYO E 427 48.062 45.933 13.340 1.00 90.35 O HETATM 7461 C2' PYO E 427 49.783 47.029 11.938 1.00 87.13 C HETATM 7462 O2' PYO E 427 48.691 47.885 11.637 1.00 85.11 O HETATM 7463 N1 PYO E 427 52.151 47.803 11.578 1.00 83.39 N HETATM 7464 C6 PYO E 427 52.307 46.741 10.581 1.00 81.92 C HETATM 7465 C2 PYO E 427 53.205 48.825 11.728 1.00 78.76 C HETATM 7466 C5 PYO E 427 53.530 46.703 9.716 1.00 78.76 C HETATM 7467 O2 PYO E 427 53.073 49.702 12.553 1.00 78.76 O HETATM 7468 N3 PYO E 427 54.434 48.778 10.869 1.00 78.76 N HETATM 7469 C4 PYO E 427 54.596 47.733 9.880 1.00 78.76 C TER 7861 DG E 446 HETATM 7962 P PYO F 427 14.129 68.019 -5.554 1.00 89.45 P HETATM 7963 OP1 PYO F 427 12.746 68.362 -4.987 1.00 83.68 O HETATM 7964 OP2 PYO F 427 14.850 69.046 -6.443 1.00 84.01 O HETATM 7965 O5' PYO F 427 15.100 67.654 -4.346 1.00101.41 O HETATM 7966 C5' PYO F 427 14.700 66.749 -3.326 1.00 89.16 C HETATM 7967 C4' PYO F 427 15.623 66.840 -2.137 1.00 88.18 C HETATM 7968 O4' PYO F 427 15.579 68.168 -1.591 1.00 85.67 O HETATM 7969 C3' PYO F 427 15.293 65.947 -0.947 1.00 95.14 C HETATM 7970 C1' PYO F 427 16.076 68.131 -0.282 1.00 85.60 C HETATM 7971 O3' PYO F 427 15.822 64.638 -1.088 1.00 89.13 O HETATM 7972 C2' PYO F 427 15.865 66.711 0.262 1.00 87.60 C HETATM 7973 O2' PYO F 427 17.128 66.183 0.639 1.00 88.96 O HETATM 7974 N1 PYO F 427 15.387 69.165 0.525 1.00 83.91 N HETATM 7975 C6 PYO F 427 14.335 68.827 1.490 1.00 83.98 C HETATM 7976 C2 PYO F 427 15.789 70.573 0.336 1.00 78.76 C HETATM 7977 C5 PYO F 427 13.681 69.914 2.288 1.00 78.76 C HETATM 7978 O2 PYO F 427 16.658 70.848 -0.464 1.00 78.76 O HETATM 7979 N3 PYO F 427 15.122 71.656 1.131 1.00 78.76 N HETATM 7980 C4 PYO F 427 14.086 71.335 2.088 1.00 79.71 C TER 8372 DG F 446 HETATM 8373 N SAH A 901 18.057 73.712 6.007 1.00 53.39 N HETATM 8374 CA SAH A 901 18.952 72.796 6.708 1.00 55.80 C HETATM 8375 CB SAH A 901 18.385 71.375 6.720 1.00 45.64 C HETATM 8376 CG SAH A 901 16.942 71.205 6.244 1.00 43.61 C HETATM 8377 SD SAH A 901 16.450 69.457 6.236 1.00 64.87 S HETATM 8378 C SAH A 901 20.359 72.783 6.109 1.00 47.01 C HETATM 8379 O SAH A 901 20.835 73.779 5.560 1.00 43.95 O HETATM 8380 OXT SAH A 901 21.068 71.775 6.183 1.00 45.95 O HETATM 8381 C5' SAH A 901 15.325 69.746 7.624 1.00 58.00 C HETATM 8382 C4' SAH A 901 15.945 69.449 8.988 1.00 55.02 C HETATM 8383 O4' SAH A 901 14.968 69.521 10.012 1.00 61.39 O HETATM 8384 C3' SAH A 901 16.542 68.052 9.069 1.00 55.06 C HETATM 8385 O3' SAH A 901 17.910 68.155 9.405 1.00 42.06 O HETATM 8386 C2' SAH A 901 15.805 67.360 10.201 1.00 44.72 C HETATM 8387 O2' SAH A 901 16.697 66.617 11.000 1.00 52.43 O HETATM 8388 C1' SAH A 901 15.229 68.524 10.983 1.00 52.31 C HETATM 8389 N9 SAH A 901 14.027 68.145 11.748 1.00 54.04 N HETATM 8390 C8 SAH A 901 13.117 67.149 11.484 1.00 51.12 C HETATM 8391 N7 SAH A 901 12.176 67.157 12.460 1.00 50.62 N HETATM 8392 C5 SAH A 901 12.478 68.143 13.338 1.00 59.10 C HETATM 8393 C6 SAH A 901 11.864 68.587 14.504 1.00 55.88 C HETATM 8394 N6 SAH A 901 10.750 67.997 14.932 1.00 54.05 N HETATM 8395 N1 SAH A 901 12.416 69.640 15.208 1.00 52.60 N HETATM 8396 C2 SAH A 901 13.570 70.244 14.754 1.00 57.47 C HETATM 8397 N3 SAH A 901 14.176 69.801 13.597 1.00 52.67 N HETATM 8398 C4 SAH A 901 13.639 68.767 12.903 1.00 54.44 C HETATM 8399 MG MG A 902 9.303 87.594 -1.604 1.00 81.24 MG HETATM 8400 N SAH D 901 54.857 52.581 6.231 1.00 59.43 N HETATM 8401 CA SAH D 901 53.607 52.913 5.550 1.00 56.17 C HETATM 8402 CB SAH D 901 52.639 51.731 5.573 1.00 48.50 C HETATM 8403 CG SAH D 901 53.234 50.375 5.947 1.00 51.61 C HETATM 8404 SD SAH D 901 51.971 49.076 5.867 1.00 59.64 S HETATM 8405 C SAH D 901 52.930 54.147 6.147 1.00 51.67 C HETATM 8406 O SAH D 901 53.580 54.993 6.766 1.00 47.22 O HETATM 8407 OXT SAH D 901 51.718 54.340 6.008 1.00 48.94 O HETATM 8408 C5' SAH D 901 52.830 48.238 4.511 1.00 61.04 C HETATM 8409 C4' SAH D 901 52.236 48.550 3.137 1.00 58.66 C HETATM 8410 O4' SAH D 901 52.774 47.702 2.133 1.00 67.88 O HETATM 8411 C3' SAH D 901 50.725 48.357 3.085 1.00 53.97 C HETATM 8412 O3' SAH D 901 50.101 49.587 2.779 1.00 43.59 O HETATM 8413 C2' SAH D 901 50.476 47.385 1.945 1.00 47.83 C HETATM 8414 O2' SAH D 901 49.389 47.808 1.151 1.00 50.75 O HETATM 8415 C1' SAH D 901 51.775 47.442 1.163 1.00 55.55 C HETATM 8416 N9 SAH D 901 52.016 46.207 0.390 1.00 51.18 N HETATM 8417 C8 SAH D 901 51.556 44.937 0.645 1.00 49.22 C HETATM 8418 N7 SAH D 901 52.012 44.111 -0.329 1.00 47.89 N HETATM 8419 C5 SAH D 901 52.750 44.839 -1.200 1.00 61.07 C HETATM 8420 C6 SAH D 901 53.439 44.505 -2.362 1.00 56.69 C HETATM 8421 N6 SAH D 901 53.441 43.247 -2.794 1.00 56.78 N HETATM 8422 N1 SAH D 901 54.120 45.482 -3.060 1.00 51.21 N HETATM 8423 C2 SAH D 901 54.112 46.784 -2.604 1.00 58.59 C HETATM 8424 N3 SAH D 901 53.428 47.111 -1.452 1.00 57.51 N HETATM 8425 C4 SAH D 901 52.756 46.156 -0.762 1.00 54.33 C HETATM 8426 MG MG D 902 71.163 51.731 13.754 1.00 75.59 MG HETATM 8427 O HOH A1001 13.950 66.253 3.891 1.00 88.68 O HETATM 8428 O HOH A1002 42.632 60.133 -14.660 1.00 58.79 O HETATM 8429 O HOH A1003 37.343 70.396 12.518 1.00 42.92 O HETATM 8430 O HOH A1004 33.342 78.043 1.650 1.00 66.10 O HETATM 8431 O HOH A1005 27.849 83.351 20.828 1.00 68.30 O HETATM 8432 O HOH A1006 15.065 86.009 -9.194 1.00 74.98 O HETATM 8433 O HOH D1001 41.883 67.476 -0.388 1.00 49.79 O HETATM 8434 O HOH D1002 52.140 57.468 -10.992 1.00 56.73 O HETATM 8435 O HOH D1003 50.592 45.221 8.471 1.00 88.10 O HETATM 8436 O HOH D1004 58.176 65.762 -8.765 1.00 63.55 O HETATM 8437 O HOH F 501 15.599 58.542 -12.573 1.00 64.06 O CONECT 7437 7451 CONECT 7451 7437 7452 7453 7454 CONECT 7452 7451 CONECT 7453 7451 CONECT 7454 7451 7455 CONECT 7455 7454 7456 CONECT 7456 7455 7457 7458 CONECT 7457 7456 7459 CONECT 7458 7456 7460 7461 CONECT 7459 7457 7461 7463 CONECT 7460 7458 7470 CONECT 7461 7458 7459 7462 CONECT 7462 7461 CONECT 7463 7459 7464 7465 CONECT 7464 7463 7466 CONECT 7465 7463 7467 7468 CONECT 7466 7464 7469 CONECT 7467 7465 CONECT 7468 7465 7469 CONECT 7469 7466 7468 CONECT 7470 7460 CONECT 7948 7962 CONECT 7962 7948 7963 7964 7965 CONECT 7963 7962 CONECT 7964 7962 CONECT 7965 7962 7966 CONECT 7966 7965 7967 CONECT 7967 7966 7968 7969 CONECT 7968 7967 7970 CONECT 7969 7967 7971 7972 CONECT 7970 7968 7972 7974 CONECT 7971 7969 7981 CONECT 7972 7969 7970 7973 CONECT 7973 7972 CONECT 7974 7970 7975 7976 CONECT 7975 7974 7977 CONECT 7976 7974 7978 7979 CONECT 7977 7975 7980 CONECT 7978 7976 CONECT 7979 7976 7980 CONECT 7980 7977 7979 CONECT 7981 7971 CONECT 8373 8374 CONECT 8374 8373 8375 8378 CONECT 8375 8374 8376 CONECT 8376 8375 8377 CONECT 8377 8376 8381 CONECT 8378 8374 8379 8380 CONECT 8379 8378 CONECT 8380 8378 CONECT 8381 8377 8382 CONECT 8382 8381 8383 8384 CONECT 8383 8382 8388 CONECT 8384 8382 8385 8386 CONECT 8385 8384 CONECT 8386 8384 8387 8388 CONECT 8387 8386 CONECT 8388 8383 8386 8389 CONECT 8389 8388 8390 8398 CONECT 8390 8389 8391 CONECT 8391 8390 8392 CONECT 8392 8391 8393 8398 CONECT 8393 8392 8394 8395 CONECT 8394 8393 CONECT 8395 8393 8396 CONECT 8396 8395 8397 CONECT 8397 8396 8398 CONECT 8398 8389 8392 8397 CONECT 8400 8401 CONECT 8401 8400 8402 8405 CONECT 8402 8401 8403 CONECT 8403 8402 8404 CONECT 8404 8403 8408 CONECT 8405 8401 8406 8407 CONECT 8406 8405 CONECT 8407 8405 CONECT 8408 8404 8409 CONECT 8409 8408 8410 8411 CONECT 8410 8409 8415 CONECT 8411 8409 8412 8413 CONECT 8412 8411 CONECT 8413 8411 8414 8415 CONECT 8414 8413 CONECT 8415 8410 8413 8416 CONECT 8416 8415 8417 8425 CONECT 8417 8416 8418 CONECT 8418 8417 8419 CONECT 8419 8418 8420 8425 CONECT 8420 8419 8421 8422 CONECT 8421 8420 CONECT 8422 8420 8423 CONECT 8423 8422 8424 CONECT 8424 8423 8425 CONECT 8425 8416 8419 8424 MASTER 477 0 6 47 32 0 32 6 8409 6 94 84 END