HEADER VIRUS 06-SEP-19 6U95 TITLE ADENO-ASSOCIATED VIRUS STRAIN AAVHU.37 CAPSID ICOSAHEDRAL STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AAVHU.37 CAP; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ADENO-ASSOCIATED VIRUS; SOURCE 3 ORGANISM_TAXID: 272636; SOURCE 4 GENE: CAP; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293T KEYWDS CAPSID, BLOOD-BRAIN BARRIER PENETRATION, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR J.T.KAELBER,S.A.YOST,E.FIRLAR,A.C.MERCER REVDAT 4 20-MAR-24 6U95 1 REMARK REVDAT 3 03-FEB-21 6U95 1 JRNL REVDAT 2 19-FEB-20 6U95 1 JRNL REVDAT 1 18-SEP-19 6U95 0 JRNL AUTH J.T.KAELBER,S.A.YOST,K.A.WEBBER,E.FIRLAR,Y.LIU,O.DANOS, JRNL AUTH 2 A.C.MERCER JRNL TITL STRUCTURE OF THE AAVHU.37 CAPSID BY CRYOELECTRON MICROSCOPY. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 76 58 2020 JRNL REFN ESSN 2053-230X JRNL PMID 32039886 JRNL DOI 10.1107/S2053230X20000308 REMARK 2 REMARK 2 RESOLUTION. 2.56 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, CRYOSPARC, COOT, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : FOURIER SPACE REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 2QA0 REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.560 REMARK 3 NUMBER OF PARTICLES : 41850 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: 2.8 UNMASKED, 2.53 MASKED, 2.56 WITH NOISE REMARK 3 -SUBSTITUTION ("TRUE FSC"). 2.7 3-BIT UNMASKED. REMARK 4 REMARK 4 6U95 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-19. REMARK 100 THE DEPOSITION ID IS D_1000243878. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ADENO-ASSOCIATED VIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : WHATMAN #1 FILTER PAPER, 4.5S REMARK 245 BLOT. 3.5 MICROLITERS SPECIMEN REMARK 245 APPLIED. REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : VIRIONS CONTAINING GFP-ENCODING REMARK 245 SSDNA WERE ASSEMBLED IN TRANSFECTED HEK293T HELPER CELLS. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 131.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 130000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 2 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 2 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 3 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 4 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 5 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 7 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 8 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 8 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 9 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 10 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 12 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 12 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 13 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 13 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 13 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 14 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 14 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 14 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 15 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 15 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 15 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 17 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 17 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 18 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 18 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 18 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 19 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 19 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 19 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 20 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 20 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 20 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 22 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 22 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 23 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 24 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 24 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 25 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 25 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 25 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 27 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 27 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 28 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 28 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 28 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 29 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 29 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 29 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 30 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 30 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 30 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 32 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 32 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 33 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 33 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 34 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 35 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 35 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 36 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 37 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 37 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 38 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 38 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 38 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 39 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 39 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 39 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 40 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 40 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 40 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 41 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 42 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 43 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 43 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 44 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 44 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 44 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 45 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 45 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 45 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 47 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 47 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 48 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 48 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 48 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 49 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 49 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 50 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 50 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 52 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 52 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 53 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 53 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 53 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 54 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 54 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 55 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 57 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 58 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 58 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 59 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 59 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 59 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 60 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 60 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 60 0.309017 0.809017 -0.500000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ASP A 4 REMARK 465 GLY A 5 REMARK 465 TYR A 6 REMARK 465 LEU A 7 REMARK 465 PRO A 8 REMARK 465 ASP A 9 REMARK 465 TRP A 10 REMARK 465 LEU A 11 REMARK 465 GLU A 12 REMARK 465 ASP A 13 REMARK 465 ASN A 14 REMARK 465 LEU A 15 REMARK 465 SER A 16 REMARK 465 GLU A 17 REMARK 465 GLY A 18 REMARK 465 ILE A 19 REMARK 465 ARG A 20 REMARK 465 GLU A 21 REMARK 465 TRP A 22 REMARK 465 TRP A 23 REMARK 465 ASP A 24 REMARK 465 LEU A 25 REMARK 465 LYS A 26 REMARK 465 PRO A 27 REMARK 465 GLY A 28 REMARK 465 ALA A 29 REMARK 465 PRO A 30 REMARK 465 LYS A 31 REMARK 465 PRO A 32 REMARK 465 LYS A 33 REMARK 465 ALA A 34 REMARK 465 ASN A 35 REMARK 465 GLN A 36 REMARK 465 GLN A 37 REMARK 465 LYS A 38 REMARK 465 GLN A 39 REMARK 465 ASP A 40 REMARK 465 ASP A 41 REMARK 465 GLY A 42 REMARK 465 ARG A 43 REMARK 465 GLY A 44 REMARK 465 LEU A 45 REMARK 465 VAL A 46 REMARK 465 LEU A 47 REMARK 465 PRO A 48 REMARK 465 GLY A 49 REMARK 465 TYR A 50 REMARK 465 LYS A 51 REMARK 465 TYR A 52 REMARK 465 LEU A 53 REMARK 465 GLY A 54 REMARK 465 PRO A 55 REMARK 465 PHE A 56 REMARK 465 ASN A 57 REMARK 465 GLY A 58 REMARK 465 LEU A 59 REMARK 465 ASP A 60 REMARK 465 LYS A 61 REMARK 465 GLY A 62 REMARK 465 GLU A 63 REMARK 465 PRO A 64 REMARK 465 VAL A 65 REMARK 465 ASN A 66 REMARK 465 ALA A 67 REMARK 465 ALA A 68 REMARK 465 ASP A 69 REMARK 465 ALA A 70 REMARK 465 ALA A 71 REMARK 465 ALA A 72 REMARK 465 LEU A 73 REMARK 465 GLU A 74 REMARK 465 HIS A 75 REMARK 465 ASP A 76 REMARK 465 LYS A 77 REMARK 465 ALA A 78 REMARK 465 TYR A 79 REMARK 465 ASP A 80 REMARK 465 GLN A 81 REMARK 465 GLN A 82 REMARK 465 LEU A 83 REMARK 465 LYS A 84 REMARK 465 ALA A 85 REMARK 465 GLY A 86 REMARK 465 ASP A 87 REMARK 465 ASN A 88 REMARK 465 PRO A 89 REMARK 465 TYR A 90 REMARK 465 LEU A 91 REMARK 465 ARG A 92 REMARK 465 TYR A 93 REMARK 465 ASN A 94 REMARK 465 HIS A 95 REMARK 465 ALA A 96 REMARK 465 ASP A 97 REMARK 465 ALA A 98 REMARK 465 GLU A 99 REMARK 465 PHE A 100 REMARK 465 GLN A 101 REMARK 465 GLU A 102 REMARK 465 ARG A 103 REMARK 465 LEU A 104 REMARK 465 GLN A 105 REMARK 465 GLU A 106 REMARK 465 ASP A 107 REMARK 465 THR A 108 REMARK 465 SER A 109 REMARK 465 PHE A 110 REMARK 465 GLY A 111 REMARK 465 GLY A 112 REMARK 465 ASN A 113 REMARK 465 LEU A 114 REMARK 465 GLY A 115 REMARK 465 ARG A 116 REMARK 465 ALA A 117 REMARK 465 VAL A 118 REMARK 465 PHE A 119 REMARK 465 GLN A 120 REMARK 465 ALA A 121 REMARK 465 LYS A 122 REMARK 465 LYS A 123 REMARK 465 ARG A 124 REMARK 465 VAL A 125 REMARK 465 LEU A 126 REMARK 465 GLU A 127 REMARK 465 PRO A 128 REMARK 465 LEU A 129 REMARK 465 GLY A 130 REMARK 465 LEU A 131 REMARK 465 VAL A 132 REMARK 465 GLU A 133 REMARK 465 GLU A 134 REMARK 465 ALA A 135 REMARK 465 ALA A 136 REMARK 465 LYS A 137 REMARK 465 THR A 138 REMARK 465 ALA A 139 REMARK 465 PRO A 140 REMARK 465 GLY A 141 REMARK 465 LYS A 142 REMARK 465 LYS A 143 REMARK 465 ARG A 144 REMARK 465 PRO A 145 REMARK 465 VAL A 146 REMARK 465 GLU A 147 REMARK 465 PRO A 148 REMARK 465 SER A 149 REMARK 465 PRO A 150 REMARK 465 GLN A 151 REMARK 465 ARG A 152 REMARK 465 SER A 153 REMARK 465 PRO A 154 REMARK 465 ASP A 155 REMARK 465 SER A 156 REMARK 465 SER A 157 REMARK 465 THR A 158 REMARK 465 GLY A 159 REMARK 465 ILE A 160 REMARK 465 GLY A 161 REMARK 465 LYS A 162 REMARK 465 LYS A 163 REMARK 465 GLY A 164 REMARK 465 GLN A 165 REMARK 465 GLN A 166 REMARK 465 PRO A 167 REMARK 465 ALA A 168 REMARK 465 LYS A 169 REMARK 465 LYS A 170 REMARK 465 ARG A 171 REMARK 465 LEU A 172 REMARK 465 ASN A 173 REMARK 465 PHE A 174 REMARK 465 GLY A 175 REMARK 465 GLN A 176 REMARK 465 THR A 177 REMARK 465 GLY A 178 REMARK 465 ASP A 179 REMARK 465 SER A 180 REMARK 465 GLU A 181 REMARK 465 SER A 182 REMARK 465 VAL A 183 REMARK 465 PRO A 184 REMARK 465 ASP A 185 REMARK 465 PRO A 186 REMARK 465 GLN A 187 REMARK 465 PRO A 188 REMARK 465 ILE A 189 REMARK 465 GLY A 190 REMARK 465 GLU A 191 REMARK 465 PRO A 192 REMARK 465 PRO A 193 REMARK 465 ALA A 194 REMARK 465 GLY A 195 REMARK 465 PRO A 196 REMARK 465 SER A 197 REMARK 465 GLY A 198 REMARK 465 LEU A 199 REMARK 465 GLY A 200 REMARK 465 SER A 201 REMARK 465 GLY A 202 REMARK 465 THR A 203 REMARK 465 MET A 204 REMARK 465 ALA A 205 REMARK 465 ALA A 206 REMARK 465 GLY A 207 REMARK 465 GLY A 208 REMARK 465 GLY A 209 REMARK 465 ALA A 210 REMARK 465 PRO A 211 REMARK 465 MET A 212 REMARK 465 ALA A 213 REMARK 465 ASP A 214 REMARK 465 ASN A 215 REMARK 465 ASN A 216 REMARK 465 GLU A 217 REMARK 465 GLY A 218 REMARK 465 ALA A 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLN A 462 O - C - N ANGL. DEV. = -10.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 565 33.33 -98.20 REMARK 500 HIS A 632 72.29 52.05 REMARK 500 ALA A 658 -179.62 -68.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-20693 RELATED DB: EMDB REMARK 900 ADENO-ASSOCIATED VIRUS STRAIN AAVHU.37 CAPSID ICOSAHEDRAL STRUCTURE DBREF 6U95 A 2 738 UNP Q6JC19 Q6JC19_9VIRU 2 738 SEQRES 1 A 737 ALA ALA ASP GLY TYR LEU PRO ASP TRP LEU GLU ASP ASN SEQRES 2 A 737 LEU SER GLU GLY ILE ARG GLU TRP TRP ASP LEU LYS PRO SEQRES 3 A 737 GLY ALA PRO LYS PRO LYS ALA ASN GLN GLN LYS GLN ASP SEQRES 4 A 737 ASP GLY ARG GLY LEU VAL LEU PRO GLY TYR LYS TYR LEU SEQRES 5 A 737 GLY PRO PHE ASN GLY LEU ASP LYS GLY GLU PRO VAL ASN SEQRES 6 A 737 ALA ALA ASP ALA ALA ALA LEU GLU HIS ASP LYS ALA TYR SEQRES 7 A 737 ASP GLN GLN LEU LYS ALA GLY ASP ASN PRO TYR LEU ARG SEQRES 8 A 737 TYR ASN HIS ALA ASP ALA GLU PHE GLN GLU ARG LEU GLN SEQRES 9 A 737 GLU ASP THR SER PHE GLY GLY ASN LEU GLY ARG ALA VAL SEQRES 10 A 737 PHE GLN ALA LYS LYS ARG VAL LEU GLU PRO LEU GLY LEU SEQRES 11 A 737 VAL GLU GLU ALA ALA LYS THR ALA PRO GLY LYS LYS ARG SEQRES 12 A 737 PRO VAL GLU PRO SER PRO GLN ARG SER PRO ASP SER SER SEQRES 13 A 737 THR GLY ILE GLY LYS LYS GLY GLN GLN PRO ALA LYS LYS SEQRES 14 A 737 ARG LEU ASN PHE GLY GLN THR GLY ASP SER GLU SER VAL SEQRES 15 A 737 PRO ASP PRO GLN PRO ILE GLY GLU PRO PRO ALA GLY PRO SEQRES 16 A 737 SER GLY LEU GLY SER GLY THR MET ALA ALA GLY GLY GLY SEQRES 17 A 737 ALA PRO MET ALA ASP ASN ASN GLU GLY ALA ASP GLY VAL SEQRES 18 A 737 GLY SER SER SER GLY ASN TRP HIS CYS ASP SER THR TRP SEQRES 19 A 737 LEU GLY ASP ARG VAL ILE THR THR SER THR ARG THR TRP SEQRES 20 A 737 ALA LEU PRO THR TYR ASN ASN HIS LEU TYR LYS GLN ILE SEQRES 21 A 737 SER ASN GLY THR SER GLY GLY SER THR ASN ASP ASN THR SEQRES 22 A 737 TYR PHE GLY TYR SER THR PRO TRP GLY TYR PHE ASP PHE SEQRES 23 A 737 ASN ARG PHE HIS CYS HIS PHE SER PRO ARG ASP TRP GLN SEQRES 24 A 737 ARG LEU ILE ASN ASN ASN TRP GLY PHE ARG PRO LYS ARG SEQRES 25 A 737 LEU SER PHE LYS LEU PHE ASN ILE GLN VAL LYS GLU VAL SEQRES 26 A 737 THR GLN ASN GLU GLY THR LYS THR ILE ALA ASN ASN LEU SEQRES 27 A 737 THR SER THR ILE GLN VAL PHE THR ASP SER GLU TYR GLN SEQRES 28 A 737 LEU PRO TYR VAL LEU GLY SER ALA HIS GLN GLY CYS LEU SEQRES 29 A 737 PRO PRO PHE PRO ALA ASP VAL PHE MET ILE PRO GLN TYR SEQRES 30 A 737 GLY TYR LEU THR LEU ASN ASN GLY SER GLN ALA VAL GLY SEQRES 31 A 737 ARG SER SER PHE TYR CYS LEU GLU TYR PHE PRO SER GLN SEQRES 32 A 737 MET LEU ARG THR GLY ASN ASN PHE GLU PHE SER TYR THR SEQRES 33 A 737 PHE GLU ASP VAL PRO PHE HIS SER SER TYR ALA HIS SER SEQRES 34 A 737 GLN SER LEU ASP ARG LEU MET ASN PRO LEU ILE ASP GLN SEQRES 35 A 737 TYR LEU TYR TYR LEU SER ARG THR GLN SER THR GLY GLY SEQRES 36 A 737 THR GLN GLY THR GLN GLN LEU LEU PHE SER GLN ALA GLY SEQRES 37 A 737 PRO ALA ASN MET SER ALA GLN ALA LYS ASN TRP LEU PRO SEQRES 38 A 737 GLY PRO CYS TYR ARG GLN GLN ARG VAL SER THR THR LEU SEQRES 39 A 737 SER GLN ASN ASN ASN SER ASN PHE ALA TRP THR GLY ALA SEQRES 40 A 737 THR LYS TYR HIS LEU ASN GLY ARG ASP SER LEU VAL ASN SEQRES 41 A 737 PRO GLY VAL ALA MET ALA THR HIS LYS ASP ASP GLU GLU SEQRES 42 A 737 ARG PHE PHE PRO SER SER GLY VAL LEU MET PHE GLY LYS SEQRES 43 A 737 GLN GLY ALA GLY ARG ASP ASN VAL ASP TYR SER SER VAL SEQRES 44 A 737 MET LEU THR SER GLU GLU GLU ILE LYS THR THR ASN PRO SEQRES 45 A 737 VAL ALA THR GLU GLN TYR GLY VAL VAL ALA ASP ASN LEU SEQRES 46 A 737 GLN GLN THR ASN THR GLY PRO ILE VAL GLY ASN VAL ASN SEQRES 47 A 737 SER GLN GLY ALA LEU PRO GLY MET VAL TRP GLN ASN ARG SEQRES 48 A 737 ASP VAL TYR LEU GLN GLY PRO ILE TRP ALA LYS ILE PRO SEQRES 49 A 737 HIS THR ASP GLY ASN PHE HIS PRO SER PRO LEU MET GLY SEQRES 50 A 737 GLY PHE GLY LEU LYS HIS PRO PRO PRO GLN ILE LEU ILE SEQRES 51 A 737 LYS ASN THR PRO VAL PRO ALA ASP PRO PRO THR THR PHE SEQRES 52 A 737 SER GLN ALA LYS LEU ALA SER PHE ILE THR GLN TYR SER SEQRES 53 A 737 THR GLY GLN VAL SER VAL GLU ILE GLU TRP GLU LEU GLN SEQRES 54 A 737 LYS GLU ASN SER LYS ARG TRP ASN PRO GLU ILE GLN TYR SEQRES 55 A 737 THR SER ASN TYR TYR LYS SER THR ASN VAL ASP PHE ALA SEQRES 56 A 737 VAL ASN THR GLU GLY THR TYR SER GLU PRO ARG PRO ILE SEQRES 57 A 737 GLY THR ARG TYR LEU THR ARG ASN LEU HELIX 1 AA1 THR A 270 THR A 274 5 5 HELIX 2 AA2 ARG A 289 HIS A 293 5 5 HELIX 3 AA3 SER A 295 ASN A 304 1 10 HELIX 4 AA4 CYS A 397 PHE A 401 5 5 HELIX 5 AA5 GLY A 469 GLN A 476 5 8 HELIX 6 AA6 THR A 494 ASN A 498 5 5 HELIX 7 AA7 ASP A 556 SER A 558 5 3 HELIX 8 AA8 GLU A 565 LYS A 569 5 5 SHEET 1 AA1 5 ASP A 232 TRP A 235 0 SHEET 2 AA1 5 ARG A 239 LEU A 250 -1 O ILE A 241 N THR A 234 SHEET 3 AA1 5 GLN A 675 LYS A 691 -1 O TRP A 687 N VAL A 240 SHEET 4 AA1 5 ASN A 306 ASN A 329 -1 N ARG A 310 O GLU A 688 SHEET 5 AA1 5 VAL A 372 MET A 374 0 SHEET 1 AA2 5 THR A 332 ASN A 337 0 SHEET 2 AA2 5 ASN A 306 ASN A 329 -1 N THR A 327 O THR A 334 SHEET 3 AA2 5 GLN A 675 LYS A 691 -1 O GLU A 688 N ARG A 310 SHEET 4 AA2 5 ARG A 239 LEU A 250 -1 N VAL A 240 O TRP A 687 SHEET 5 AA2 5 PHE A 412 THR A 417 0 SHEET 1 AA3 3 LYS A 259 ASN A 263 0 SHEET 2 AA3 3 TYR A 275 TYR A 284 -1 O GLY A 277 N ILE A 261 SHEET 3 AA3 3 GLN A 377 LEU A 381 -1 O TYR A 378 N TRP A 282 SHEET 1 AA4 5 LYS A 259 ASN A 263 0 SHEET 2 AA4 5 TYR A 275 TYR A 284 -1 O GLY A 277 N ILE A 261 SHEET 3 AA4 5 ILE A 649 ASN A 653 -1 O ILE A 651 N GLY A 283 SHEET 4 AA4 5 ILE A 343 THR A 347 -1 N GLN A 344 O LYS A 652 SHEET 5 AA4 5 GLN A 404 LEU A 406 -1 O GLN A 404 N VAL A 345 SHEET 1 AA5 2 ALA A 428 HIS A 429 0 SHEET 2 AA5 2 THR A 735 ARG A 736 1 O ARG A 736 N ALA A 428 SHEET 1 AA6 2 TYR A 447 GLN A 452 0 SHEET 2 AA6 2 GLN A 461 SER A 466 -1 O LEU A 464 N SER A 449 SHEET 1 AA7 2 CYS A 485 TYR A 486 0 SHEET 2 AA7 2 SER A 600 GLN A 601 -1 O GLN A 601 N CYS A 485 SHEET 1 AA8 2 ARG A 490 SER A 492 0 SHEET 2 AA8 2 PHE A 536 PRO A 538 -1 O PHE A 537 N VAL A 491 SHEET 1 AA9 2 LYS A 510 LEU A 513 0 SHEET 2 AA9 2 ARG A 516 LEU A 519 -1 O ARG A 516 N LEU A 513 SHEET 1 AB1 2 MET A 544 GLY A 546 0 SHEET 2 AB1 2 VAL A 560 LEU A 562 -1 O MET A 561 N PHE A 545 SHEET 1 AB2 2 GLY A 580 ALA A 583 0 SHEET 2 AB2 2 VAL A 595 VAL A 598 -1 O GLY A 596 N VAL A 582 SHEET 1 AB3 2 TRP A 621 LYS A 623 0 SHEET 2 AB3 2 PHE A 640 LEU A 642 1 O LEU A 642 N ALA A 622 CISPEP 1 ASN A 521 PRO A 522 0 1.01 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000