data_6UF9 # _entry.id 6UF9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.336 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6UF9 WWPDB D_1000244519 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6UF9 _pdbx_database_status.recvd_initial_deposition_date 2019-09-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mulligan, V.K.' 1 0000-0001-6038-8922 'Kang, C.S.' 2 0000-0003-0959-0783 'Antselovich, I.' 3 0000-0002-2208-9937 'Sawaya, M.R.' 4 0000-0003-0874-9043 'Yeates, T.O.' 5 0000-0001-5709-9839 'Baker, D.' 6 0000-0001-7896-6217 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Protein Sci.' _citation.journal_id_ASTM PRCIEI _citation.journal_id_CSD 0795 _citation.journal_id_ISSN 1469-896X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 29 _citation.language ? _citation.page_first 2433 _citation.page_last 2445 _citation.title 'Computational design of mixed chirality peptide macrocycles with internal symmetry.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/pro.3974 _citation.pdbx_database_id_PubMed 33058266 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mulligan, V.K.' 1 0000-0001-6038-8922 primary 'Kang, C.S.' 2 0000-0003-0959-0783 primary 'Sawaya, M.R.' 3 ? primary 'Rettie, S.' 4 ? primary 'Li, X.' 5 ? primary 'Antselovich, I.' 6 ? primary 'Craven, T.W.' 7 ? primary 'Watkins, A.M.' 8 ? primary 'Labonte, J.W.' 9 ? primary 'DiMaio, F.' 10 ? primary 'Yeates, T.O.' 11 0000-0001-5709-9839 primary 'Baker, D.' 12 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6UF9 _cell.details ? _cell.formula_units_Z ? _cell.length_a 27.770 _cell.length_a_esd ? _cell.length_b 28.350 _cell.length_b_esd ? _cell.length_c 12.220 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UF9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'S4-1, Tim apo-form' 2907.329 1 ? ? ? 'The asymmetric unit contains half of the molecule. The second half is generated by a crystallographic symmetry operator.' 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 water nat water 18.015 17 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'KL(DGN)(DGL)(AIB)H(DLY)(DLE)QE(AIB)(DHI)KL(DGN)(DGL)(AIB)H(DLY)(DLE)QE(AIB)(DHI)' _entity_poly.pdbx_seq_one_letter_code_can KLQEAHKLQEAHKLQEAHKLQEAH _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 LEU n 1 3 DGN n 1 4 DGL n 1 5 AIB n 1 6 HIS n 1 7 DLY n 1 8 DLE n 1 9 GLN n 1 10 GLU n 1 11 AIB n 1 12 DHI n 1 13 LYS n 1 14 LEU n 1 15 DGN n 1 16 DGL n 1 17 AIB n 1 18 HIS n 1 19 DLY n 1 20 DLE n 1 21 GLN n 1 22 GLU n 1 23 AIB n 1 24 DHI n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 24 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'ab initio design' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6UF9 _struct_ref.pdbx_db_accession 6UF9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6UF9 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 24 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6UF9 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 24 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 DGL 'D-peptide linking' . 'D-GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 DGN 'D-peptide linking' . D-GLUTAMINE ? 'C5 H10 N2 O3' 146.144 DHI 'D-peptide linking' . D-HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 DLE 'D-peptide linking' . D-LEUCINE ? 'C6 H13 N O2' 131.173 DLY 'D-peptide linking' . D-LYSINE ? 'C6 H14 N2 O2' 146.188 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6UF9 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.64 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 25.20 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '3.15 M ammonium sulfate, 0.1 M citric acid, pH 5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-03-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si (111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 15.470 _reflns.entry_id 6UF9 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.100 _reflns.d_resolution_low 19.838 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 4233 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.311 _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 13.010 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.881 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.099 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.100 1.130 ? 3.830 ? ? ? ? 300 98.400 ? ? ? ? 0.511 ? ? ? ? ? ? ? ? 7.190 ? ? ? ? 0.551 ? ? 1 1 0.912 ? 1.130 1.160 ? 5.530 ? ? ? ? 286 99.300 ? ? ? ? 0.394 ? ? ? ? ? ? ? ? 9.266 ? ? ? ? 0.418 ? ? 2 1 0.957 ? 1.160 1.190 ? 5.950 ? ? ? ? 290 99.000 ? ? ? ? 0.365 ? ? ? ? ? ? ? ? 9.324 ? ? ? ? 0.386 ? ? 3 1 0.965 ? 1.190 1.230 ? 6.960 ? ? ? ? 287 99.000 ? ? ? ? 0.304 ? ? ? ? ? ? ? ? 9.443 ? ? ? ? 0.322 ? ? 4 1 0.983 ? 1.230 1.270 ? 7.010 ? ? ? ? 257 100.000 ? ? ? ? 0.326 ? ? ? ? ? ? ? ? 10.000 ? ? ? ? 0.344 ? ? 5 1 0.976 ? 1.270 1.310 ? 8.730 ? ? ? ? 267 100.000 ? ? ? ? 0.217 ? ? ? ? ? ? ? ? 9.603 ? ? ? ? 0.230 ? ? 6 1 0.995 ? 1.310 1.360 ? 10.580 ? ? ? ? 266 100.000 ? ? ? ? 0.209 ? ? ? ? ? ? ? ? 10.241 ? ? ? ? 0.220 ? ? 7 1 0.983 ? 1.360 1.420 ? 11.770 ? ? ? ? 243 100.000 ? ? ? ? 0.178 ? ? ? ? ? ? ? ? 11.074 ? ? ? ? 0.187 ? ? 8 1 0.993 ? 1.420 1.480 ? 13.150 ? ? ? ? 237 100.000 ? ? ? ? 0.159 ? ? ? ? ? ? ? ? 10.907 ? ? ? ? 0.167 ? ? 9 1 0.990 ? 1.480 1.560 ? 14.210 ? ? ? ? 228 100.000 ? ? ? ? 0.151 ? ? ? ? ? ? ? ? 10.807 ? ? ? ? 0.159 ? ? 10 1 0.987 ? 1.560 1.640 ? 15.910 ? ? ? ? 217 100.000 ? ? ? ? 0.128 ? ? ? ? ? ? ? ? 11.382 ? ? ? ? 0.134 ? ? 11 1 0.993 ? 1.640 1.740 ? 17.550 ? ? ? ? 216 100.000 ? ? ? ? 0.110 ? ? ? ? ? ? ? ? 10.648 ? ? ? ? 0.116 ? ? 12 1 0.998 ? 1.740 1.860 ? 18.780 ? ? ? ? 195 100.000 ? ? ? ? 0.102 ? ? ? ? ? ? ? ? 11.287 ? ? ? ? 0.107 ? ? 13 1 0.994 ? 1.860 2.010 ? 22.050 ? ? ? ? 189 100.000 ? ? ? ? 0.089 ? ? ? ? ? ? ? ? 12.275 ? ? ? ? 0.093 ? ? 14 1 0.997 ? 2.010 2.200 ? 22.830 ? ? ? ? 171 100.000 ? ? ? ? 0.089 ? ? ? ? ? ? ? ? 11.942 ? ? ? ? 0.093 ? ? 15 1 0.997 ? 2.200 2.460 ? 23.460 ? ? ? ? 159 100.000 ? ? ? ? 0.080 ? ? ? ? ? ? ? ? 11.799 ? ? ? ? 0.083 ? ? 16 1 0.998 ? 2.460 2.840 ? 23.070 ? ? ? ? 138 100.000 ? ? ? ? 0.074 ? ? ? ? ? ? ? ? 11.399 ? ? ? ? 0.078 ? ? 17 1 0.996 ? 2.840 3.480 ? 22.390 ? ? ? ? 123 100.000 ? ? ? ? 0.078 ? ? ? ? ? ? ? ? 10.439 ? ? ? ? 0.082 ? ? 18 1 0.997 ? 3.480 4.920 ? 24.460 ? ? ? ? 99 100.000 ? ? ? ? 0.081 ? ? ? ? ? ? ? ? 11.687 ? ? ? ? 0.085 ? ? 19 1 0.993 ? 4.920 19.838 ? 21.370 ? ? ? ? 65 100.000 ? ? ? ? 0.116 ? ? ? ? ? ? ? ? 9.308 ? ? ? ? 0.124 ? ? 20 1 0.992 ? # _refine.aniso_B[1][1] 0.214 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] -0.021 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] -0.193 _refine.B_iso_max ? _refine.B_iso_mean 16.929 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.987 _refine.correlation_coeff_Fo_to_Fc_free 0.979 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6UF9 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.100 _refine.ls_d_res_low 19.838 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 4233 _refine.ls_number_reflns_R_free 424 _refine.ls_number_reflns_R_work 3809 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.647 _refine.ls_percent_reflns_R_free 10.017 _refine.ls_R_factor_all 0.132 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.1734 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1280 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free 0.188 _refine.ls_wR_factor_R_work 0.144 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.038 _refine.pdbx_overall_ESU_R_Free 0.040 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.347 _refine.overall_SU_ML 0.028 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work 0.9624 _refine.pdbx_average_fsc_free 0.9447 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.100 _refine_hist.d_res_low 19.838 _refine_hist.number_atoms_solvent 17 _refine_hist.number_atoms_total 129 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 102 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.013 146 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.017 150 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.994 1.659 201 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.767 1.606 355 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.809 5.000 19 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 1.713 10.000 1 ? r_dihedral_angle_other_1_deg ? ? 'X-RAY DIFFRACTION' ? 41.051 27.500 4 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 3.789 10.000 1 ? r_dihedral_angle_other_2_deg ? ? 'X-RAY DIFFRACTION' ? 20.887 15.000 21 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 0.152 0.200 15 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 156 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 24 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.254 0.200 32 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.254 0.200 108 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.207 0.200 56 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.136 0.200 55 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.148 0.200 17 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.007 0.200 1 ? r_symmetry_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.620 0.200 27 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.314 0.200 40 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.216 0.200 15 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 1.363 1.039 57 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.361 1.038 57 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 1.809 1.570 70 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 1.798 1.567 71 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 4.291 1.717 89 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 4.035 1.622 82 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 5.627 2.419 126 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 5.062 2.202 115 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 6.851 20.456 148 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 5.026 17.611 140 ? r_lrange_other ? ? 'X-RAY DIFFRACTION' ? 4.235 3.000 296 ? r_rigid_bond_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.100 1.128 306 . 30 269 97.7124 . 0.253 . 0.321 . 0.247 . . . . . 0.222 20 . 0.897 0.818 'X-RAY DIFFRACTION' 1.128 1.159 285 . 29 254 99.2982 . 0.201 . 0.235 . 0.197 . . . . . 0.171 20 . 0.934 0.918 'X-RAY DIFFRACTION' 1.159 1.193 294 . 29 262 98.9796 . 0.197 . 0.283 . 0.188 . . . . . 0.168 20 . 0.936 0.917 'X-RAY DIFFRACTION' 1.193 1.229 285 . 28 254 98.9474 . 0.193 . 0.267 . 0.184 . . . . . 0.163 20 . 0.944 0.946 'X-RAY DIFFRACTION' 1.229 1.269 258 . 26 232 100.0000 . 0.175 . 0.217 . 0.170 . . . . . 0.151 20 . 0.945 0.928 'X-RAY DIFFRACTION' 1.269 1.314 265 . 26 239 100.0000 . 0.153 . 0.206 . 0.147 . . . . . 0.137 20 . 0.964 0.955 'X-RAY DIFFRACTION' 1.314 1.363 269 . 27 242 100.0000 . 0.149 . 0.234 . 0.141 . . . . . 0.129 20 . 0.970 0.948 'X-RAY DIFFRACTION' 1.363 1.419 239 . 24 215 100.0000 . 0.121 . 0.186 . 0.116 . . . . . 0.110 20 . 0.980 0.959 'X-RAY DIFFRACTION' 1.419 1.481 243 . 24 219 100.0000 . 0.121 . 0.232 . 0.111 . . . . . 0.109 20 . 0.980 0.956 'X-RAY DIFFRACTION' 1.481 1.553 232 . 23 209 100.0000 . 0.129 . 0.184 . 0.122 . . . . . 0.120 20 . 0.978 0.961 'X-RAY DIFFRACTION' 1.553 1.637 209 . 21 188 100.0000 . 0.111 . 0.112 . 0.110 . . . . . 0.114 20 . 0.979 0.972 'X-RAY DIFFRACTION' 1.637 1.735 220 . 22 198 100.0000 . 0.122 . 0.179 . 0.116 . . . . . 0.127 20 . 0.982 0.967 'X-RAY DIFFRACTION' 1.735 1.854 191 . 19 172 100.0000 . 0.130 . 0.139 . 0.129 . . . . . 0.146 20 . 0.977 0.973 'X-RAY DIFFRACTION' 1.854 2.001 187 . 19 168 100.0000 . 0.128 . 0.185 . 0.121 . . . . . 0.145 20 . 0.978 0.965 'X-RAY DIFFRACTION' 2.001 2.190 172 . 17 155 100.0000 . 0.133 . 0.197 . 0.127 . . . . . 0.155 20 . 0.981 0.956 'X-RAY DIFFRACTION' 2.190 2.445 164 . 17 147 100.0000 . 0.108 . 0.131 . 0.105 . . . . . 0.121 20 . 0.985 0.984 'X-RAY DIFFRACTION' 2.445 2.816 136 . 13 123 100.0000 . 0.123 . 0.189 . 0.116 . . . . . 0.162 20 . 0.984 0.974 'X-RAY DIFFRACTION' 2.816 3.431 120 . 12 108 100.0000 . 0.124 . 0.128 . 0.124 . . . . . 0.184 20 . 0.984 0.985 'X-RAY DIFFRACTION' 3.431 4.782 103 . 11 92 100.0000 . 0.111 . 0.156 . 0.106 . . . . . 0.161 20 . 0.992 0.979 'X-RAY DIFFRACTION' 4.782 19.838 69 . 7 62 100.0000 . 0.139 . 0.130 . 0.140 . . . . . 0.233 20 . 0.984 0.989 # _struct.entry_id 6UF9 _struct.title 'S4 symmetric peptide design number 1, Tim apo form' _struct.pdbx_descriptor 'S4-1, Tim apo-form' _struct.pdbx_model_details 'S2 symmetric cyclic peptide' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6UF9 _struct_keywords.text 'cyclic peptide, centrosymmetric macrocycle, L- and D-amino acids, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LYS 1 N ? ? ? 1_555 A DHI 12 C ? ? A LYS 1 A DHI 12 2_555 ? ? ? ? ? ? ? 1.345 ? ? covale2 covale both ? A LEU 2 C ? ? ? 1_555 A DGN 3 N ? ? A LEU 2 A DGN 3 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale3 covale both ? A DGN 3 C ? ? ? 1_555 A DGL 4 N ? ? A DGN 3 A DGL 4 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale4 covale both ? A DGL 4 C ? ? ? 1_555 A AIB 5 N ? ? A DGL 4 A AIB 5 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale5 covale both ? A AIB 5 C ? ? ? 1_555 A HIS 6 N ? ? A AIB 5 A HIS 6 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A HIS 6 C ? ? ? 1_555 A DLY 7 N ? ? A HIS 6 A DLY 7 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale7 covale both ? A DLY 7 C ? ? ? 1_555 A DLE 8 N ? ? A DLY 7 A DLE 8 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale8 covale both ? A DLE 8 C ? ? ? 1_555 A GLN 9 N ? ? A DLE 8 A GLN 9 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale9 covale both ? A GLU 10 C ? ? ? 1_555 A AIB 11 N ? ? A GLU 10 A AIB 11 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale10 covale both ? A AIB 11 C ? ? ? 1_555 A DHI 12 N ? ? A AIB 11 A DHI 12 1_555 ? ? ? ? ? ? ? 1.338 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 6UF9 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.036010 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035273 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.081833 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 DGN 3 3 3 DGN DGN A . n A 1 4 DGL 4 4 4 DGL DGL A . n A 1 5 AIB 5 5 5 AIB AIB A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 DLY 7 7 7 DLY DLY A . n A 1 8 DLE 8 8 8 DLE DLE A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 AIB 11 11 11 AIB AIB A . n A 1 12 DHI 12 12 12 DHI DHI A . n A 1 13 LYS 13 13 ? ? ? A . n A 1 14 LEU 14 14 ? ? ? A . n A 1 15 DGN 15 15 ? ? ? A . n A 1 16 DGL 16 16 ? ? ? A . n A 1 17 AIB 17 17 ? ? ? A . n A 1 18 HIS 18 18 ? ? ? A . n A 1 19 DLY 19 19 ? ? ? A . n A 1 20 DLE 20 20 ? ? ? A . n A 1 21 GLN 21 21 ? ? ? A . n A 1 22 GLU 22 22 ? ? ? A . n A 1 23 AIB 23 23 ? ? ? A . n A 1 24 DHI 24 24 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 101 31 SO4 SO4 A . C 2 SO4 1 102 32 SO4 SO4 A . D 3 HOH 1 201 47 HOH HOH A . D 3 HOH 2 202 39 HOH HOH A . D 3 HOH 3 203 41 HOH HOH A . D 3 HOH 4 204 38 HOH HOH A . D 3 HOH 5 205 40 HOH HOH A . D 3 HOH 6 206 44 HOH HOH A . D 3 HOH 7 207 43 HOH HOH A . D 3 HOH 8 208 48 HOH HOH A . D 3 HOH 9 209 49 HOH HOH A . D 3 HOH 10 210 35 HOH HOH A . D 3 HOH 11 211 34 HOH HOH A . D 3 HOH 12 212 36 HOH HOH A . D 3 HOH 13 213 33 HOH HOH A . D 3 HOH 14 214 42 HOH HOH A . D 3 HOH 15 215 45 HOH HOH A . D 3 HOH 16 216 37 HOH HOH A . D 3 HOH 17 217 46 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1190 ? 1 MORE -33 ? 1 'SSA (A^2)' 2680 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2020-12-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0253 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20180126 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? 20180126 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXD ? ? ? . 5 # _pdbx_entry_details.entry_id 6UF9 _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details 'The asymmetric unit contains half of the molecule. The second half is generated by a crystallographic symmetry operator.' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 13 ? A LYS 13 2 1 Y 1 A LEU 14 ? A LEU 14 3 1 Y 1 A DGN 15 ? A DGN 15 4 1 Y 1 A DGL 16 ? A DGL 16 5 1 Y 1 A AIB 17 ? A AIB 17 6 1 Y 1 A HIS 18 ? A HIS 18 7 1 Y 1 A DLY 19 ? A DLY 19 8 1 Y 1 A DLE 20 ? A DLE 20 9 1 Y 1 A GLN 21 ? A GLN 21 10 1 Y 1 A GLU 22 ? A GLU 22 11 1 Y 1 A AIB 23 ? A AIB 23 12 1 Y 1 A DHI 24 ? A DHI 24 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Department of Energy (DOE, United States)' 'United States' DE-FC02-02ER63421 1 'Department of Energy (DOE, United States)' 'United States' DE-AC02-06CH11357 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #