data_6UFA # _entry.id 6UFA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.336 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6UFA WWPDB D_1000244520 # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'same peptide but without zinc' _pdbx_database_related.db_id 6UF9 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6UFA _pdbx_database_status.recvd_initial_deposition_date 2019-09-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mulligan, V.K.' 1 0000-0001-6038-8922 'Kang, C.S.' 2 0000-0003-0959-0783 'Antselovich, I.' 3 0000-0002-2208-9937 'Sawaya, M.R.' 4 0000-0003-0874-9043 'Yeates, T.O.' 5 0000-0001-5709-9839 'Baker, D.' 6 0000-0001-7896-6217 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Protein Sci.' _citation.journal_id_ASTM PRCIEI _citation.journal_id_CSD 0795 _citation.journal_id_ISSN 1469-896X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 29 _citation.language ? _citation.page_first 2433 _citation.page_last 2445 _citation.title 'Computational design of mixed chirality peptide macrocycles with internal symmetry.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/pro.3974 _citation.pdbx_database_id_PubMed 33058266 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mulligan, V.K.' 1 0000-0001-6038-8922 primary 'Kang, C.S.' 2 0000-0003-0959-0783 primary 'Sawaya, M.R.' 3 ? primary 'Rettie, S.' 4 ? primary 'Li, X.' 5 ? primary 'Antselovich, I.' 6 ? primary 'Craven, T.W.' 7 ? primary 'Watkins, A.M.' 8 ? primary 'Labonte, J.W.' 9 ? primary 'DiMaio, F.' 10 ? primary 'Yeates, T.O.' 11 0000-0001-5709-9839 primary 'Baker, D.' 12 ? # _cell.angle_alpha 106.103 _cell.angle_alpha_esd ? _cell.angle_beta 94.813 _cell.angle_beta_esd ? _cell.angle_gamma 89.429 _cell.angle_gamma_esd ? _cell.entry_id 6UFA _cell.details ? _cell.formula_units_Z ? _cell.length_a 20.960 _cell.length_a_esd ? _cell.length_b 20.980 _cell.length_b_esd ? _cell.length_c 26.880 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UFA _symmetry.cell_setting ? _symmetry.Int_Tables_number 2 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P -1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'S4-1, Tim, Zinc-bound form' 2907.329 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 3 water nat water 18.015 35 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'KL(DGN)(DGL)(AIB)H(DLY)(DLE)QE(AIB)(DHI)KL(DGN)(DGL)(AIB)H(DLY)(DLE)QE(AIB)(DHI)' _entity_poly.pdbx_seq_one_letter_code_can KLQEAHKLQEAHKLQEAHKLQEAH _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 LEU n 1 3 DGN n 1 4 DGL n 1 5 AIB n 1 6 HIS n 1 7 DLY n 1 8 DLE n 1 9 GLN n 1 10 GLU n 1 11 AIB n 1 12 DHI n 1 13 LYS n 1 14 LEU n 1 15 DGN n 1 16 DGL n 1 17 AIB n 1 18 HIS n 1 19 DLY n 1 20 DLE n 1 21 GLN n 1 22 GLU n 1 23 AIB n 1 24 DHI n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 24 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'ab initio design' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6UFA _struct_ref.pdbx_db_accession 6UFA _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6UFA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 24 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6UFA _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 24 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 DGL 'D-peptide linking' . 'D-GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 DGN 'D-peptide linking' . D-GLUTAMINE ? 'C5 H10 N2 O3' 146.144 DHI 'D-peptide linking' . D-HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 DLE 'D-peptide linking' . D-LEUCINE ? 'C6 H13 N O2' 131.173 DLY 'D-peptide linking' . D-LYSINE ? 'C6 H14 N2 O2' 146.188 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6UFA _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.95 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 36.79 _exptl_crystal.description 'square plate' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.1 M sodium malonate, 0.1 M HEPES, pH 7, 0.5% (w/v) Jeffamine ED-2003' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-03-22 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Si (111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.729300 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.729300 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 7.559 _reflns.entry_id 6UFA _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 0.770 _reflns.d_resolution_low 20.88 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 46103 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 88.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.597 _reflns.pdbx_Rmerge_I_obs 0.039 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.300 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.093 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.046 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? _reflns.pdbx_CC_star ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split _reflns_shell.pdbx_CC_star 0.770 0.790 ? 3.950 ? ? ? ? 2954 77.200 ? ? ? ? 0.236 ? ? ? ? ? ? ? ? 3.244 ? ? ? ? 0.283 ? ? 1 1 0.962 ? ? 0.790 0.810 ? 5.050 ? ? ? ? 3320 87.900 ? ? ? ? 0.202 ? ? ? ? ? ? ? ? 3.631 ? ? ? ? 0.236 ? ? 2 1 0.974 ? ? 0.810 0.840 ? 6.170 ? ? ? ? 3240 88.600 ? ? ? ? 0.159 ? ? ? ? ? ? ? ? 3.564 ? ? ? ? 0.186 ? ? 3 1 0.982 ? ? 0.840 0.860 ? 6.630 ? ? ? ? 3109 88.600 ? ? ? ? 0.141 ? ? ? ? ? ? ? ? 3.405 ? ? ? ? 0.167 ? ? 4 1 0.985 ? ? 0.860 0.890 ? 8.380 ? ? ? ? 3092 89.900 ? ? ? ? 0.117 ? ? ? ? ? ? ? ? 3.707 ? ? ? ? 0.137 ? ? 5 1 0.991 ? ? 0.890 0.920 ? 10.630 ? ? ? ? 2949 89.500 ? ? ? ? 0.089 ? ? ? ? ? ? ? ? 3.696 ? ? ? ? 0.104 ? ? 6 1 0.994 ? ? 0.920 0.960 ? 12.330 ? ? ? ? 2886 88.900 ? ? ? ? 0.073 ? ? ? ? ? ? ? ? 3.567 ? ? ? ? 0.085 ? ? 7 1 0.995 ? ? 0.960 0.990 ? 14.200 ? ? ? ? 2745 89.100 ? ? ? ? 0.065 ? ? ? ? ? ? ? ? 3.554 ? ? ? ? 0.077 ? ? 8 1 0.996 ? ? 0.990 1.040 ? 15.880 ? ? ? ? 2660 90.600 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 3.771 ? ? ? ? 0.071 ? ? 9 1 0.997 ? ? 1.040 1.090 ? 17.550 ? ? ? ? 2561 90.800 ? ? ? ? 0.054 ? ? ? ? ? ? ? ? 3.711 ? ? ? ? 0.063 ? ? 10 1 0.997 ? ? 1.090 1.150 ? 19.460 ? ? ? ? 2383 88.900 ? ? ? ? 0.048 ? ? ? ? ? ? ? ? 3.643 ? ? ? ? 0.056 ? ? 11 1 0.997 ? ? 1.150 1.220 ? 21.620 ? ? ? ? 2201 87.200 ? ? ? ? 0.043 ? ? ? ? ? ? ? ? 3.591 ? ? ? ? 0.051 ? ? 12 1 0.998 ? ? 1.220 1.300 ? 22.950 ? ? ? ? 2241 93.100 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 3.768 ? ? ? ? 0.048 ? ? 13 1 0.998 ? ? 1.300 1.410 ? 24.800 ? ? ? ? 2036 91.100 ? ? ? ? 0.039 ? ? ? ? ? ? ? ? 3.728 ? ? ? ? 0.046 ? ? 14 1 0.998 ? ? 1.410 1.540 ? 25.710 ? ? ? ? 1824 90.400 ? ? ? ? 0.038 ? ? ? ? ? ? ? ? 3.637 ? ? ? ? 0.044 ? ? 15 1 0.998 ? ? 1.540 1.720 ? 27.090 ? ? ? ? 1579 85.500 ? ? ? ? 0.035 ? ? ? ? ? ? ? ? 3.523 ? ? ? ? 0.041 ? ? 16 1 0.998 ? ? 1.720 1.990 ? 29.200 ? ? ? ? 1529 94.600 ? ? ? ? 0.034 ? ? ? ? ? ? ? ? 3.581 ? ? ? ? 0.039 ? ? 17 1 0.998 ? ? 1.990 2.430 ? 30.700 ? ? ? ? 1286 92.500 ? ? ? ? 0.035 ? ? ? ? ? ? ? ? 3.530 ? ? ? ? 0.041 ? ? 18 1 0.998 ? ? 2.430 3.440 ? 31.130 ? ? ? ? 918 86.300 ? ? ? ? 0.033 ? ? ? ? ? ? ? ? 3.415 ? ? ? ? 0.038 ? ? 19 1 0.998 ? ? 3.440 20.88 ? 32.860 ? ? ? ? 573 98.300 ? ? ? ? 0.035 ? ? ? ? ? ? ? ? 3.611 ? ? ? ? 0.041 ? ? 20 1 0.997 ? ? # _refine.aniso_B[1][1] -0.086 _refine.aniso_B[1][2] 0.006 _refine.aniso_B[1][3] -0.031 _refine.aniso_B[2][2] 0.049 _refine.aniso_B[2][3] -0.005 _refine.aniso_B[3][3] 0.039 _refine.B_iso_max ? _refine.B_iso_mean 8.627 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.979 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6UFA _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 0.770 _refine.ls_d_res_low 20.001 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 46103 _refine.ls_number_reflns_R_free 4610 _refine.ls_number_reflns_R_work 41493 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 88.789 _refine.ls_percent_reflns_R_free 9.999 _refine.ls_R_factor_all 0.127 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.1318 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1263 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free 0.137 _refine.ls_wR_factor_R_work 0.130 _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'AB INITIO PHASING' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.008 _refine.pdbx_overall_ESU_R_Free 0.009 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 0.080 _refine.overall_SU_ML 0.003 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work 0.9917 _refine.pdbx_average_fsc_free 0.9909 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 0.770 _refine_hist.d_res_low 20.001 _refine_hist.number_atoms_solvent 35 _refine_hist.number_atoms_total 240 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 204 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.006 0.012 222 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.002 0.017 218 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.594 1.646 306 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.499 1.574 504 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 2.619 5.000 28 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 53.282 27.143 7 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 1.017 10.000 2 ? r_dihedral_angle_other_2_deg ? ? 'X-RAY DIFFRACTION' ? 8.120 15.000 24 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 0.085 0.200 22 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 268 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 46 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.252 0.200 65 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.238 0.200 196 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.172 0.200 104 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.076 0.200 103 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.147 0.200 11 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.040 0.200 4 ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? 0.085 0.200 5 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.115 0.200 13 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.055 0.200 9 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.639 0.540 100 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 0.638 0.539 100 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 0.944 0.818 126 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 0.940 0.817 127 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 1.552 0.878 120 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 1.546 0.875 121 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 2.138 1.191 178 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 2.132 1.187 179 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 1.874 8.181 239 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 1.776 7.839 234 ? r_lrange_other ? ? 'X-RAY DIFFRACTION' ? 1.231 3.000 438 ? r_rigid_bond_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 0.770 0.790 3823 . 295 2653 77.1122 . 0.181 . 0.189 . 0.180 . . . . . 0.134 20 . 0.980 0.976 'X-RAY DIFFRACTION' 0.790 0.812 3764 . 331 2986 88.1243 . 0.146 . 0.155 . 0.145 . . . . . 0.110 20 . 0.986 0.986 'X-RAY DIFFRACTION' 0.812 0.835 3653 . 324 2914 88.6395 . 0.129 . 0.133 . 0.129 . . . . . 0.097 20 . 0.989 0.989 'X-RAY DIFFRACTION' 0.835 0.861 3496 . 310 2785 88.5297 . 0.126 . 0.137 . 0.125 . . . . . 0.095 20 . 0.990 0.989 'X-RAY DIFFRACTION' 0.861 0.889 3435 . 309 2786 90.1019 . 0.107 . 0.120 . 0.106 . . . . . 0.083 20 . 0.993 0.991 'X-RAY DIFFRACTION' 0.889 0.920 3289 . 295 2650 89.5409 . 0.090 . 0.094 . 0.089 . . . . . 0.073 20 . 0.995 0.995 'X-RAY DIFFRACTION' 0.920 0.955 3233 . 288 2595 89.1741 . 0.087 . 0.094 . 0.086 . . . . . 0.073 20 . 0.996 0.995 'X-RAY DIFFRACTION' 0.955 0.994 3075 . 274 2469 89.2032 . 0.080 . 0.083 . 0.079 . . . . . 0.071 20 . 0.996 0.996 'X-RAY DIFFRACTION' 0.994 1.038 2938 . 266 2390 90.4016 . 0.080 . 0.087 . 0.079 . . . . . 0.074 20 . 0.997 0.996 'X-RAY DIFFRACTION' 1.038 1.088 2816 . 256 2306 90.9801 . 0.082 . 0.080 . 0.083 . . . . . 0.082 20 . 0.996 0.996 'X-RAY DIFFRACTION' 1.088 1.147 2674 . 239 2152 89.4166 . 0.084 . 0.100 . 0.082 . . . . . 0.086 20 . 0.996 0.995 'X-RAY DIFFRACTION' 1.147 1.216 2527 . 220 1976 86.9015 . 0.086 . 0.090 . 0.086 . . . . . 0.097 20 . 0.996 0.996 'X-RAY DIFFRACTION' 1.216 1.300 2400 . 223 2012 93.1250 . 0.092 . 0.096 . 0.092 . . . . . 0.106 20 . 0.996 0.995 'X-RAY DIFFRACTION' 1.300 1.403 2227 . 204 1834 91.5132 . 0.093 . 0.099 . 0.093 . . . . . 0.113 20 . 0.995 0.995 'X-RAY DIFFRACTION' 1.403 1.537 2017 . 182 1640 90.3322 . 0.107 . 0.101 . 0.108 . . . . . 0.140 20 . 0.994 0.994 'X-RAY DIFFRACTION' 1.537 1.717 1854 . 158 1421 85.1672 . 0.127 . 0.130 . 0.127 . . . . . 0.170 20 . 0.991 0.991 'X-RAY DIFFRACTION' 1.717 1.980 1629 . 155 1396 95.2118 . 0.151 . 0.153 . 0.151 . . . . . 0.211 20 . 0.987 0.986 'X-RAY DIFFRACTION' 1.980 2.419 1377 . 128 1146 92.5200 . 0.164 . 0.177 . 0.163 . . . . . 0.234 20 . 0.985 0.984 'X-RAY DIFFRACTION' 2.419 3.396 1083 . 93 845 86.6113 . 0.193 . 0.226 . 0.189 . . . . . 0.292 20 . 0.977 0.971 'X-RAY DIFFRACTION' 3.396 20.001 597 . 59 532 98.9950 . 0.202 . 0.160 . 0.206 . . . . . 0.348 20 . 0.975 0.983 # _struct.entry_id 6UFA _struct.title 'S4 symmetric peptide design number 1, Tim zinc-bound form' _struct.pdbx_descriptor 'S4-1, Tim, Zinc-bound form' _struct.pdbx_model_details 'S2 symmetric cyclic peptide' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6UFA _struct_keywords.text 'cyclic peptide, centrosymmetric macrocycle, L and D-amino acids, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id DGN _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 3 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id GLN _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 21 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id DGN _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 3 _struct_conf.end_auth_comp_id GLN _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 21 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LYS 1 N ? ? ? 1_555 A DHI 24 C ? ? A LYS 1 A DHI 24 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale2 covale both ? A LEU 2 C ? ? ? 1_555 A DGN 3 N ? ? A LEU 2 A DGN 3 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale3 covale both ? A DGN 3 C ? ? ? 1_555 A DGL 4 N ? ? A DGN 3 A DGL 4 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale4 covale both ? A DGL 4 C ? ? ? 1_555 A AIB 5 N ? ? A DGL 4 A AIB 5 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale5 covale both ? A AIB 5 C ? ? ? 1_555 A HIS 6 N ? ? A AIB 5 A HIS 6 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale6 covale both ? A HIS 6 C ? ? ? 1_555 A DLY 7 N ? ? A HIS 6 A DLY 7 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale7 covale both ? A DLY 7 C ? ? ? 1_555 A DLE 8 N ? ? A DLY 7 A DLE 8 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale8 covale both ? A DLE 8 C ? ? ? 1_555 A GLN 9 N ? ? A DLE 8 A GLN 9 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale9 covale both ? A GLU 10 C ? ? ? 1_555 A AIB 11 N ? ? A GLU 10 A AIB 11 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale10 covale both ? A AIB 11 C ? ? ? 1_555 A DHI 12 N ? ? A AIB 11 A DHI 12 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale11 covale both ? A DHI 12 C ? ? ? 1_555 A LYS 13 N ? ? A DHI 12 A LYS 13 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale12 covale both ? A LEU 14 C ? ? ? 1_555 A DGN 15 N ? ? A LEU 14 A DGN 15 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale13 covale both ? A DGN 15 C ? ? ? 1_555 A DGL 16 N ? ? A DGN 15 A DGL 16 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale14 covale both ? A DGL 16 C ? ? ? 1_555 A AIB 17 N ? ? A DGL 16 A AIB 17 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale15 covale both ? A AIB 17 C ? ? ? 1_555 A HIS 18 N ? ? A AIB 17 A HIS 18 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale16 covale both ? A HIS 18 C ? ? ? 1_555 A DLY 19 N ? ? A HIS 18 A DLY 19 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale17 covale both ? A DLY 19 C ? ? ? 1_555 A DLE 20 N ? ? A DLY 19 A DLE 20 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale18 covale both ? A DLE 20 C ? ? ? 1_555 A GLN 21 N ? ? A DLE 20 A GLN 21 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale19 covale both ? A GLU 22 C ? ? ? 1_555 A AIB 23 N ? ? A GLU 22 A AIB 23 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale20 covale both ? A AIB 23 C ? ? ? 1_555 A DHI 24 N ? ? A AIB 23 A DHI 24 1_555 ? ? ? ? ? ? ? 1.340 ? ? metalc1 metalc ? ? A HIS 6 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 6 A ZN 101 1_555 ? ? ? ? ? ? ? 2.019 ? ? metalc2 metalc ? ? A DHI 12 ND1 ? ? ? 1_555 B ZN . ZN ? ? A DHI 12 A ZN 101 1_555 ? ? ? ? ? ? ? 2.021 ? ? metalc3 metalc ? ? A HIS 18 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 18 A ZN 101 1_555 ? ? ? ? ? ? ? 2.020 ? ? metalc4 metalc ? ? A DHI 24 ND1 ? ? ? 1_555 B ZN . ZN ? ? A DHI 24 A ZN 101 1_555 ? ? ? ? ? ? ? 2.017 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _atom_sites.entry_id 6UFA _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.047710 _atom_sites.fract_transf_matrix[1][2] -0.000475 _atom_sites.fract_transf_matrix[1][3] 0.004044 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.047667 _atom_sites.fract_transf_matrix[2][3] 0.013769 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.038860 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 LEU 2 2 2 LEU LEU A . n A 1 3 DGN 3 3 3 DGN DGN A . n A 1 4 DGL 4 4 4 DGL DGL A . n A 1 5 AIB 5 5 5 AIB AIB A . n A 1 6 HIS 6 6 6 HIS HIS A . n A 1 7 DLY 7 7 7 DLY DLY A . n A 1 8 DLE 8 8 8 DLE DLE A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 AIB 11 11 11 AIB AIB A . n A 1 12 DHI 12 12 12 DHI DHI A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 DGN 15 15 15 DGN DGN A . n A 1 16 DGL 16 16 16 DGL DGL A . n A 1 17 AIB 17 17 17 AIB AIB A . n A 1 18 HIS 18 18 18 HIS HIS A . n A 1 19 DLY 19 19 19 DLY DLY A . n A 1 20 DLE 20 20 20 DLE DLE A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 AIB 23 23 23 AIB AIB A . n A 1 24 DHI 24 24 24 DHI DHI A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 101 26 ZN ZN A . C 3 HOH 1 201 52 HOH HOH A . C 3 HOH 2 202 61 HOH HOH A . C 3 HOH 3 203 37 HOH HOH A . C 3 HOH 4 204 38 HOH HOH A . C 3 HOH 5 205 60 HOH HOH A . C 3 HOH 6 206 33 HOH HOH A . C 3 HOH 7 207 32 HOH HOH A . C 3 HOH 8 208 27 HOH HOH A . C 3 HOH 9 209 47 HOH HOH A . C 3 HOH 10 210 57 HOH HOH A . C 3 HOH 11 211 46 HOH HOH A . C 3 HOH 12 212 29 HOH HOH A . C 3 HOH 13 213 30 HOH HOH A . C 3 HOH 14 214 40 HOH HOH A . C 3 HOH 15 215 39 HOH HOH A . C 3 HOH 16 216 28 HOH HOH A . C 3 HOH 17 217 34 HOH HOH A . C 3 HOH 18 218 45 HOH HOH A . C 3 HOH 19 219 44 HOH HOH A . C 3 HOH 20 220 35 HOH HOH A . C 3 HOH 21 221 42 HOH HOH A . C 3 HOH 22 222 49 HOH HOH A . C 3 HOH 23 223 31 HOH HOH A . C 3 HOH 24 224 59 HOH HOH A . C 3 HOH 25 225 51 HOH HOH A . C 3 HOH 26 226 36 HOH HOH A . C 3 HOH 27 227 55 HOH HOH A . C 3 HOH 28 228 43 HOH HOH A . C 3 HOH 29 229 48 HOH HOH A . C 3 HOH 30 230 54 HOH HOH A . C 3 HOH 31 231 50 HOH HOH A . C 3 HOH 32 232 56 HOH HOH A . C 3 HOH 33 233 53 HOH HOH A . C 3 HOH 34 234 41 HOH HOH A . C 3 HOH 35 235 58 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 6 ? A HIS 6 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 ND1 ? A DHI 12 ? A DHI 12 ? 1_555 112.1 ? 2 ND1 ? A HIS 6 ? A HIS 6 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 ND1 ? A HIS 18 ? A HIS 18 ? 1_555 107.5 ? 3 ND1 ? A DHI 12 ? A DHI 12 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 ND1 ? A HIS 18 ? A HIS 18 ? 1_555 110.1 ? 4 ND1 ? A HIS 6 ? A HIS 6 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 ND1 ? A DHI 24 ? A DHI 24 ? 1_555 111.1 ? 5 ND1 ? A DHI 12 ? A DHI 12 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 ND1 ? A DHI 24 ? A DHI 24 ? 1_555 106.8 ? 6 ND1 ? A HIS 18 ? A HIS 18 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 ND1 ? A DHI 24 ? A DHI 24 ? 1_555 109.3 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2020-12-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0253 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20180126 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? 20180126 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXT ? ? ? . 5 # _pdbx_entry_details.entry_id 6UFA _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Department of Energy (DOE, United States)' 'United States' DE-FC02-02ER63421 1 'Department of Energy (DOE, United States)' 'United States' DE-AC02-06CH11357 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #