data_6UFJ # _entry.id 6UFJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6UFJ pdb_00006ufj 10.2210/pdb6ufj/pdb WWPDB D_1000244527 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-12-18 2 'Structure model' 1 1 2019-12-25 3 'Structure model' 1 2 2020-01-22 4 'Structure model' 1 3 2020-02-19 5 'Structure model' 1 4 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_entity_src_syn 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' citation 5 4 'Structure model' citation_author 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 9 5 'Structure model' struct_conn 10 5 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 2 2 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 3 3 'Structure model' '_citation.title' 4 3 'Structure model' '_citation_author.identifier_ORCID' 5 4 'Structure model' '_citation.journal_volume' 6 4 'Structure model' '_citation.page_first' 7 4 'Structure model' '_citation.page_last' 8 4 'Structure model' '_citation.year' 9 4 'Structure model' '_citation_author.identifier_ORCID' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_struct_conn.conn_type_id' 13 5 'Structure model' '_struct_conn.id' 14 5 'Structure model' '_struct_conn.pdbx_dist_value' 15 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 17 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 24 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 5 'Structure model' '_struct_conn_type.id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6UFJ _pdbx_database_status.recvd_initial_deposition_date 2019-09-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Teplova, M.' 1 ? 'Falschlunger, C.' 2 ? 'Krasheninina, O.' 3 ? 'Patel, D.J.' 4 ? 'Micura, R.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_id_ASTM ACIEAY _citation.journal_id_CSD 0179 _citation.journal_id_ISSN 1521-3773 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 59 _citation.language ? _citation.page_first 2837 _citation.page_last 2843 _citation.title 'Crucial Roles of Two Hydrated Mg2+Ions in Reaction Catalysis of the Pistol Ribozyme.' _citation.year 2020 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/anie.201912522 _citation.pdbx_database_id_PubMed 31804735 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Teplova, M.' 1 ? primary 'Falschlunger, C.' 2 ? primary 'Krasheninina, O.' 3 ? primary 'Egger, M.' 4 ? primary 'Ren, A.' 5 ? primary 'Patel, D.J.' 6 ? primary 'Micura, R.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (50-MER)' 16537.918 2 ? ? ? ? 2 polymer syn ;RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(23G))-3') ; 3152.809 2 ? ? ? ? 3 polymer syn ;RNA (5'-R(*UP*CP*CP*AP*G)-3') ; 1545.984 2 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 17 ? ? ? ? 5 water nat water 18.015 2 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no ACUCGUUUGAGCGAGUAUAAACAGCUGGUUAAGCUCAAAGCGGAGAGCAGA ACUCGUUUGAGCGAGUAUAAACAGCUGGUUAAGCUCAAAGCGGAGAGCAGA A,C ? 2 polyribonucleotide no yes 'UCUGCUCUC(23G)' UCUGCUCUCX B,D ? 3 polyribonucleotide no no UCCAG UCCAG E,F ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 A n 1 2 C n 1 3 U n 1 4 C n 1 5 G n 1 6 U n 1 7 U n 1 8 U n 1 9 G n 1 10 A n 1 11 G n 1 12 C n 1 13 G n 1 14 A n 1 15 G n 1 16 U n 1 17 A n 1 18 U n 1 19 A n 1 20 A n 1 21 A n 1 22 C n 1 23 A n 1 24 G n 1 25 C n 1 26 U n 1 27 G n 1 28 G n 1 29 U n 1 30 U n 1 31 A n 1 32 A n 1 33 G n 1 34 C n 1 35 U n 1 36 C n 1 37 A n 1 38 A n 1 39 A n 1 40 G n 1 41 C n 1 42 G n 1 43 G n 1 44 A n 1 45 G n 1 46 A n 1 47 G n 1 48 C n 1 49 A n 1 50 G n 1 51 A n 2 1 U n 2 2 C n 2 3 U n 2 4 G n 2 5 C n 2 6 U n 2 7 C n 2 8 U n 2 9 C n 2 10 23G n 3 1 U n 3 2 C n 3 3 C n 3 4 A n 3 5 G n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 51 'synthetic construct' ? 32630 ? 2 1 sample 1 10 'synthetic construct' ? 32630 ? 3 1 sample 1 5 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 23G 'RNA OH 3 prime terminus' n ;GUANOSINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C10 H13 N5 O10 P2' 425.185 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 A 1 1 1 A A A . n A 1 2 C 2 2 2 C C A . n A 1 3 U 3 3 3 U U A . n A 1 4 C 4 4 4 C C A . n A 1 5 G 5 5 5 G G A . n A 1 6 U 6 6 6 U U A . n A 1 7 U 7 7 7 U U A . n A 1 8 U 8 8 8 U U A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 G 11 11 11 G G A . n A 1 12 C 12 12 12 C C A . n A 1 13 G 13 13 13 G G A . n A 1 14 A 14 14 14 A A A . n A 1 15 G 15 15 15 G G A . n A 1 16 U 16 16 16 U U A . n A 1 17 A 17 17 17 A A A . n A 1 18 U 18 18 18 U U A . n A 1 19 A 19 19 19 A A A . n A 1 20 A 20 20 20 A A A . n A 1 21 A 21 21 21 A A A . n A 1 22 C 22 22 22 C C A . n A 1 23 A 23 23 23 A A A . n A 1 24 G 24 24 24 G G A . n A 1 25 C 25 25 25 C C A . n A 1 26 U 26 26 26 U U A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 U 29 29 29 U U A . n A 1 30 U 30 30 30 U U A . n A 1 31 A 31 31 31 A A A . n A 1 32 A 32 32 32 A A A . n A 1 33 G 33 33 33 G G A . n A 1 34 C 34 34 34 C C A . n A 1 35 U 35 35 35 U U A . n A 1 36 C 36 36 36 C C A . n A 1 37 A 37 37 37 A A A . n A 1 38 A 38 38 38 A A A . n A 1 39 A 39 39 39 A A A . n A 1 40 G 40 40 40 G G A . n A 1 41 C 41 41 41 C C A . n A 1 42 G 42 42 42 G G A . n A 1 43 G 43 43 43 G G A . n A 1 44 A 44 44 44 A A A . n A 1 45 G 45 45 45 G G A . n A 1 46 A 46 46 46 A A A . n A 1 47 G 47 47 47 G G A . n A 1 48 C 48 48 48 C C A . n A 1 49 A 49 49 49 A A A . n A 1 50 G 50 50 50 G G A . n A 1 51 A 51 51 ? ? ? A . n B 2 1 U 1 1 1 U U B . n B 2 2 C 2 2 2 C C B . n B 2 3 U 3 3 3 U U B . n B 2 4 G 4 4 4 G G B . n B 2 5 C 5 5 5 C C B . n B 2 6 U 6 6 6 U U B . n B 2 7 C 7 7 7 C C B . n B 2 8 U 8 8 8 U U B . n B 2 9 C 9 9 9 C C B . n B 2 10 23G 10 10 10 23G 23G B . n C 3 1 U 1 11 11 U U E . n C 3 2 C 2 12 12 C C E . n C 3 3 C 3 13 13 C C E . n C 3 4 A 4 14 14 A A E . n C 3 5 G 5 15 15 G G E . n D 1 1 A 1 1 1 A A C . n D 1 2 C 2 2 2 C C C . n D 1 3 U 3 3 3 U U C . n D 1 4 C 4 4 4 C C C . n D 1 5 G 5 5 5 G G C . n D 1 6 U 6 6 6 U U C . n D 1 7 U 7 7 7 U U C . n D 1 8 U 8 8 8 U U C . n D 1 9 G 9 9 9 G G C . n D 1 10 A 10 10 10 A A C . n D 1 11 G 11 11 11 G G C . n D 1 12 C 12 12 12 C C C . n D 1 13 G 13 13 13 G G C . n D 1 14 A 14 14 14 A A C . n D 1 15 G 15 15 15 G G C . n D 1 16 U 16 16 16 U U C . n D 1 17 A 17 17 17 A A C . n D 1 18 U 18 18 18 U U C . n D 1 19 A 19 19 19 A A C . n D 1 20 A 20 20 20 A A C . n D 1 21 A 21 21 21 A A C . n D 1 22 C 22 22 22 C C C . n D 1 23 A 23 23 23 A A C . n D 1 24 G 24 24 24 G G C . n D 1 25 C 25 25 25 C C C . n D 1 26 U 26 26 26 U U C . n D 1 27 G 27 27 27 G G C . n D 1 28 G 28 28 28 G G C . n D 1 29 U 29 29 29 U U C . n D 1 30 U 30 30 30 U U C . n D 1 31 A 31 31 31 A A C . n D 1 32 A 32 32 32 A A C . n D 1 33 G 33 33 33 G G C . n D 1 34 C 34 34 34 C C C . n D 1 35 U 35 35 35 U U C . n D 1 36 C 36 36 36 C C C . n D 1 37 A 37 37 37 A A C . n D 1 38 A 38 38 38 A A C . n D 1 39 A 39 39 39 A A C . n D 1 40 G 40 40 40 G G C . n D 1 41 C 41 41 41 C C C . n D 1 42 G 42 42 42 G G C . n D 1 43 G 43 43 43 G G C . n D 1 44 A 44 44 44 A A C . n D 1 45 G 45 45 45 G G C . n D 1 46 A 46 46 46 A A C . n D 1 47 G 47 47 47 G G C . n D 1 48 C 48 48 48 C C C . n D 1 49 A 49 49 49 A A C . n D 1 50 G 50 50 50 G G C . n D 1 51 A 51 51 ? ? ? C . n E 2 1 U 1 1 1 U U D . n E 2 2 C 2 2 2 C C D . n E 2 3 U 3 3 3 U U D . n E 2 4 G 4 4 4 G G D . n E 2 5 C 5 5 5 C C D . n E 2 6 U 6 6 6 U U D . n E 2 7 C 7 7 7 C C D . n E 2 8 U 8 8 8 U U D . n E 2 9 C 9 9 9 C C D . n E 2 10 23G 10 10 10 23G 23G D . n F 3 1 U 1 11 11 U U F . n F 3 2 C 2 12 12 C C F . n F 3 3 C 3 13 13 C C F . n F 3 4 A 4 14 14 A A F . n F 3 5 G 5 15 15 G G F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 MG 1 101 1 MG MG A . H 4 MG 1 102 2 MG MG A . I 4 MG 1 103 8 MG MG A . J 4 MG 1 104 9 MG MG A . K 4 MG 1 105 10 MG MG A . L 4 MG 1 106 11 MG MG A . M 4 MG 1 107 12 MG MG A . N 4 MG 1 108 16 MG MG A . O 4 MG 1 109 17 MG MG A . P 4 MG 1 101 3 MG MG C . Q 4 MG 1 102 4 MG MG C . R 4 MG 1 103 5 MG MG C . S 4 MG 1 104 6 MG MG C . T 4 MG 1 105 7 MG MG C . U 4 MG 1 106 13 MG MG C . V 4 MG 1 107 14 MG MG C . W 4 MG 1 108 15 MG MG C . X 5 HOH 1 201 1 HOH HOH C . Y 5 HOH 1 101 2 HOH HOH F . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.16_3549 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.25 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6UFJ _cell.details ? _cell.formula_units_Z ? _cell.length_a 90.734 _cell.length_a_esd ? _cell.length_b 90.734 _cell.length_b_esd ? _cell.length_c 121.651 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UFJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6UFJ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.99 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 58.83 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05 M HEPES sodium, pH 7.5, 0.1 M magnesium chloride, 25-30% MPD' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-06-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97918 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6UFJ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.645 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15346 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.8 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 43.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.015 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.65 _reflns_shell.d_res_low 2.7 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 723 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.28 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 166.540 _refine.B_iso_mean 91.9876 _refine.B_iso_min 49.050 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6UFJ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.6450 _refine.ls_d_res_low 38.4930 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15194 _refine.ls_number_reflns_R_free 1519 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.4000 _refine.ls_percent_reflns_R_free 10.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1950 _refine.ls_R_factor_R_free 0.2391 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1901 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.8600 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4300 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.6450 _refine_hist.d_res_low 38.4930 _refine_hist.number_atoms_solvent 2 _refine_hist.number_atoms_total 2783 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 130 _refine_hist.pdbx_B_iso_mean_ligand 87.44 _refine_hist.pdbx_B_iso_mean_solvent 72.13 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2764 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id 'X-RAY DIFFRACTION' 1 ? ? ? ? ? 1 TORSIONAL ? A 1192 7.799 ? 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? 2 TORSIONAL ? C 1192 7.799 ? 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? 3 TORSIONAL ? B 332 7.799 ? 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? 4 TORSIONAL ? D 332 7.799 ? 2 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.6453 2.7306 . . 124 1131 91.0000 . . . 0.4342 0.0000 0.3786 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7306 2.8282 . . 136 1224 99.0000 . . . 0.5313 0.0000 0.3261 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8282 2.9414 . . 133 1218 99.0000 . . . 0.3289 0.0000 0.2939 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9414 3.0752 . . 137 1213 98.0000 . . . 0.3562 0.0000 0.2733 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0752 3.2373 . . 136 1223 97.0000 . . . 0.2519 0.0000 0.2245 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2373 3.4400 . . 134 1206 98.0000 . . . 0.2485 0.0000 0.1973 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4400 3.7054 . . 141 1258 100.0000 . . . 0.2435 0.0000 0.1882 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7054 4.0779 . . 139 1250 99.0000 . . . 0.1854 0.0000 0.1568 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0779 4.6671 . . 141 1280 100.0000 . . . 0.2033 0.0000 0.1521 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.6671 5.8767 . . 145 1295 100.0000 . . . 0.2232 0.0000 0.1671 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.8767 38.4930 . . 153 1377 99.0000 . . . 0.2297 0.0000 0.1883 . . . . . . . . . . # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 'chain A' 1 2 'chain C' 2 1 'chain B' 2 2 'chain D' # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.selection_details _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.end_auth_comp_id 1 1 1 ? A 1 A 50 'chain A' ? ? ? ? ? ? ? ? ? ? 1 2 1 ? C 1 C 50 'chain C' ? ? ? ? ? ? ? ? ? ? 2 1 1 ? B 1 B 15 'chain B' ? ? ? ? ? ? ? ? ? ? 2 2 1 ? D 1 D 15 'chain D' ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 6UFJ _struct.title 'Pistol ribozyme product crystal structure' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6UFJ _struct_keywords.text ;Self-cleaving ribozymes, transesterification reaction, pre-catalytic state, pentavalent transition state analog, cyclophosphate product, RNA ; _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 4 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 4 ? U N N 4 ? V N N 4 ? W N N 4 ? X N N 5 ? Y N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 6UFJ 6UFJ ? 1 ? 1 2 PDB 6UFJ 6UFJ ? 2 ? 1 3 PDB 6UFJ 6UFJ ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6UFJ A 1 ? 51 ? 6UFJ 1 ? 51 ? 1 51 2 2 6UFJ B 1 ? 10 ? 6UFJ 1 ? 10 ? 1 10 3 3 6UFJ E 1 ? 5 ? 6UFJ 11 ? 15 ? 11 15 4 1 6UFJ C 1 ? 51 ? 6UFJ 1 ? 51 ? 1 51 5 2 6UFJ D 1 ? 10 ? 6UFJ 1 ? 10 ? 1 10 6 3 6UFJ F 1 ? 5 ? 6UFJ 11 ? 15 ? 11 15 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2890 ? 1 MORE -72 ? 1 'SSA (A^2)' 10390 ? 2 'ABSA (A^2)' 2870 ? 2 MORE -66 ? 2 'SSA (A^2)' 10270 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,G,H,I,J,K,L,M,N,O 2 1 D,E,F,P,Q,R,S,T,U,V,W,X,Y # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'native gel electrophoresis' ? 2 2 'native gel electrophoresis' ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B C 9 "O3'" ? ? ? 1_555 B 23G 10 P ? ? B C 9 B 23G 10 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale2 covale both ? E C 9 "O3'" ? ? ? 1_555 E 23G 10 P ? ? D C 9 D 23G 10 1_555 ? ? ? ? ? ? ? 1.604 ? ? metalc1 metalc ? ? A U 7 OP1 ? ? ? 1_555 N MG . MG ? ? A U 7 A MG 108 1_555 ? ? ? ? ? ? ? 1.961 ? ? metalc2 metalc ? ? A A 23 OP2 ? ? ? 1_555 K MG . MG ? ? A A 23 A MG 105 1_555 ? ? ? ? ? ? ? 2.284 ? ? metalc3 metalc ? ? A A 23 OP1 ? ? ? 1_555 L MG . MG ? ? A A 23 A MG 106 1_555 ? ? ? ? ? ? ? 2.516 ? ? metalc4 metalc ? ? A G 24 OP2 ? ? ? 1_555 L MG . MG ? ? A G 24 A MG 106 1_555 ? ? ? ? ? ? ? 2.859 ? ? metalc5 metalc ? ? A U 26 OP1 ? ? ? 1_555 L MG . MG ? ? A U 26 A MG 106 1_555 ? ? ? ? ? ? ? 2.542 ? ? metalc6 metalc one ? A G 33 N7 ? ? ? 1_555 G MG . MG ? ? A G 33 A MG 101 1_555 ? ? ? ? ? ? ? 2.306 ? ? metalc7 metalc ? ? A C 41 OP2 ? ? ? 1_555 M MG . MG ? ? A C 41 A MG 107 1_555 ? ? ? ? ? ? ? 2.545 ? ? metalc8 metalc ? ? A G 42 OP2 ? ? ? 1_555 M MG . MG ? ? A G 42 A MG 107 1_555 ? ? ? ? ? ? ? 2.747 ? ? metalc9 metalc ? ? G MG . MG ? ? ? 1_555 B 23G 10 OC1 ? ? A MG 101 B 23G 10 1_555 ? ? ? ? ? ? ? 2.829 ? ? metalc10 metalc ? ? D U 7 OP1 ? ? ? 1_555 S MG . MG ? ? C U 7 C MG 104 1_555 ? ? ? ? ? ? ? 1.925 ? ? metalc11 metalc ? ? D U 26 OP1 ? ? ? 1_555 U MG . MG ? ? C U 26 C MG 106 1_555 ? ? ? ? ? ? ? 1.911 ? ? metalc12 metalc one ? D G 33 N7 ? ? ? 1_555 P MG . MG ? ? C G 33 C MG 101 1_555 ? ? ? ? ? ? ? 2.544 ? ? metalc13 metalc one ? D A 38 N7 ? ? ? 1_555 Q MG . MG ? ? C A 38 C MG 102 1_555 ? ? ? ? ? ? ? 2.685 ? ? metalc14 metalc ? ? D G 42 OP2 ? ? ? 1_555 R MG . MG ? ? C G 42 C MG 103 1_555 ? ? ? ? ? ? ? 2.024 ? ? hydrog1 hydrog ? ? A C 2 N3 ? ? ? 1_555 A G 15 N1 ? ? A C 2 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A C 2 N4 ? ? ? 1_555 A G 15 O6 ? ? A C 2 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 2 O2 ? ? ? 1_555 A G 15 N2 ? ? A C 2 A G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 14 N1 ? ? A U 3 A A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 14 N6 ? ? A U 3 A A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 13 N1 ? ? A C 4 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 13 O6 ? ? A C 4 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 13 N2 ? ? A C 4 A G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 O2 ? ? ? 1_555 A A 20 N6 ? ? A C 4 A A 20 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog10 hydrog ? ? A C 4 O2 ? ? ? 1_555 A A 21 N6 ? ? A C 4 A A 21 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 12 N3 ? ? A G 5 A C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 12 O2 ? ? A G 5 A C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 12 N4 ? ? A G 5 A C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 5 N2 ? ? ? 1_555 A G 24 N3 ? ? A G 5 A G 24 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog15 hydrog ? ? A G 5 N3 ? ? ? 1_555 A G 24 N2 ? ? A G 5 A G 24 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog16 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 39 N1 ? ? A U 6 A A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 39 N6 ? ? A U 6 A A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 38 N1 ? ? A U 7 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 38 N6 ? ? A U 7 A A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 37 N1 ? ? A U 8 A A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 37 N6 ? ? A U 8 A A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 36 N3 ? ? A G 9 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 36 O2 ? ? A G 9 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 36 N4 ? ? A G 9 A C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A A 10 N1 ? ? ? 1_555 A U 35 N3 ? ? A A 10 A U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A A 10 N6 ? ? ? 1_555 A U 35 O4 ? ? A A 10 A U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 34 N3 ? ? A G 11 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 34 O2 ? ? A G 11 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 34 N4 ? ? A G 11 A C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 13 N2 ? ? ? 1_555 A A 21 N1 ? ? A G 13 A A 21 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog31 hydrog ? ? A A 14 N3 ? ? ? 1_555 A A 20 N6 ? ? A A 14 A A 20 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog32 hydrog ? ? A G 15 N3 ? ? ? 1_555 A A 19 N6 ? ? A G 15 A A 19 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog33 hydrog ? ? A U 16 N3 ? ? ? 1_555 D A 1 N7 ? ? A U 16 C A 1 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog34 hydrog ? ? A U 16 O4 ? ? ? 1_555 D A 1 N6 ? ? A U 16 C A 1 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog35 hydrog ? ? A C 25 N3 ? ? ? 1_555 C G 5 N1 ? ? A C 25 E G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 25 N4 ? ? ? 1_555 C G 5 O6 ? ? A C 25 E G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 25 O2 ? ? ? 1_555 C G 5 N2 ? ? A C 25 E G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 26 N3 ? ? ? 1_555 C A 4 N1 ? ? A U 26 E A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 26 O4 ? ? ? 1_555 C A 4 N6 ? ? A U 26 E A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 27 N1 ? ? ? 1_555 C C 3 N3 ? ? A G 27 E C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 27 N2 ? ? ? 1_555 C C 3 O2 ? ? A G 27 E C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 27 O6 ? ? ? 1_555 C C 3 N4 ? ? A G 27 E C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 28 N1 ? ? ? 1_555 C C 2 N3 ? ? A G 28 E C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 28 N2 ? ? ? 1_555 C C 2 O2 ? ? A G 28 E C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 28 O6 ? ? ? 1_555 C C 2 N4 ? ? A G 28 E C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 29 N3 ? ? ? 1_555 C U 1 O4 ? ? A U 29 E U 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog47 hydrog ? ? A U 29 O2 ? ? ? 1_555 C U 1 N3 ? ? A U 29 E U 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog48 hydrog ? ? A A 31 N1 ? ? ? 1_555 A G 43 N2 ? ? A A 31 A G 43 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog49 hydrog ? ? A G 33 O6 ? ? ? 1_555 A A 39 N6 ? ? A G 33 A A 39 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog50 hydrog ? ? A G 33 O6 ? ? ? 1_555 A G 40 N2 ? ? A G 33 A G 40 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog51 hydrog ? ? A G 33 N1 ? ? ? 1_555 A C 41 N3 ? ? A G 33 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 33 N2 ? ? ? 1_555 A C 41 O2 ? ? A G 33 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? A G 33 O6 ? ? ? 1_555 A C 41 N4 ? ? A G 33 A C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A A 39 N1 ? ? ? 1_555 A C 41 N4 ? ? A A 39 A C 41 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog55 hydrog ? ? A G 40 N2 ? ? ? 1_555 A G 42 O6 ? ? A G 40 A G 42 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog56 hydrog ? ? A G 42 O6 ? ? ? 1_555 B 23G 10 N2 ? ? A G 42 B 23G 10 1_555 ? ? ? ? ? ? 'G-23G MISPAIR' ? ? ? hydrog57 hydrog ? ? A G 43 N1 ? ? ? 1_555 B C 9 N3 ? ? A G 43 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 43 N2 ? ? ? 1_555 B C 9 O2 ? ? A G 43 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 43 O6 ? ? ? 1_555 B C 9 N4 ? ? A G 43 B C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A A 44 N1 ? ? ? 1_555 B U 8 N3 ? ? A A 44 B U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A A 44 N6 ? ? ? 1_555 B U 8 O4 ? ? A A 44 B U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A G 45 N1 ? ? ? 1_555 B C 7 N3 ? ? A G 45 B C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A G 45 N2 ? ? ? 1_555 B C 7 O2 ? ? A G 45 B C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 45 O6 ? ? ? 1_555 B C 7 N4 ? ? A G 45 B C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A A 46 N1 ? ? ? 1_555 B U 6 N3 ? ? A A 46 B U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A A 46 N6 ? ? ? 1_555 B U 6 O4 ? ? A A 46 B U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A G 47 N1 ? ? ? 1_555 B C 5 N3 ? ? A G 47 B C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 47 N2 ? ? ? 1_555 B C 5 O2 ? ? A G 47 B C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 47 O6 ? ? ? 1_555 B C 5 N4 ? ? A G 47 B C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 48 N3 ? ? ? 1_555 B G 4 N1 ? ? A C 48 B G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 48 N4 ? ? ? 1_555 B G 4 O6 ? ? A C 48 B G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 48 O2 ? ? ? 1_555 B G 4 N2 ? ? A C 48 B G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A A 49 N1 ? ? ? 1_555 B U 3 N3 ? ? A A 49 B U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A A 49 N6 ? ? ? 1_555 B U 3 O4 ? ? A A 49 B U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 50 N1 ? ? ? 1_555 B C 2 N3 ? ? A G 50 B C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 50 N2 ? ? ? 1_555 B C 2 O2 ? ? A G 50 B C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 50 O6 ? ? ? 1_555 B C 2 N4 ? ? A G 50 B C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? D A 1 N1 ? ? ? 1_555 D U 16 N3 ? ? C A 1 C U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? D A 1 N6 ? ? ? 1_555 D U 16 O4 ? ? C A 1 C U 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? D C 2 N3 ? ? ? 1_555 D G 15 N1 ? ? C C 2 C G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? D C 2 N4 ? ? ? 1_555 D G 15 O6 ? ? C C 2 C G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? D C 2 O2 ? ? ? 1_555 D G 15 N2 ? ? C C 2 C G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? D U 3 N3 ? ? ? 1_555 D A 14 N1 ? ? C U 3 C A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? D U 3 O4 ? ? ? 1_555 D A 14 N6 ? ? C U 3 C A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? D C 4 N3 ? ? ? 1_555 D G 13 N1 ? ? C C 4 C G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? D C 4 N4 ? ? ? 1_555 D G 13 O6 ? ? C C 4 C G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? D C 4 O2 ? ? ? 1_555 D G 13 N2 ? ? C C 4 C G 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? D C 4 O2 ? ? ? 1_555 D A 20 N6 ? ? C C 4 C A 20 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog89 hydrog ? ? D C 4 O2 ? ? ? 1_555 D A 21 N6 ? ? C C 4 C A 21 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog90 hydrog ? ? D G 5 N1 ? ? ? 1_555 D C 12 N3 ? ? C G 5 C C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? D G 5 N2 ? ? ? 1_555 D C 12 O2 ? ? C G 5 C C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? D G 5 O6 ? ? ? 1_555 D C 12 N4 ? ? C G 5 C C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? D G 5 N2 ? ? ? 1_555 D G 24 N3 ? ? C G 5 C G 24 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog94 hydrog ? ? D G 5 N3 ? ? ? 1_555 D G 24 N2 ? ? C G 5 C G 24 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog95 hydrog ? ? D U 6 N3 ? ? ? 1_555 D A 39 N1 ? ? C U 6 C A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? D U 6 O4 ? ? ? 1_555 D A 39 N6 ? ? C U 6 C A 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? D U 7 N3 ? ? ? 1_555 D A 38 N1 ? ? C U 7 C A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? D U 7 O4 ? ? ? 1_555 D A 38 N6 ? ? C U 7 C A 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? D U 8 N3 ? ? ? 1_555 D A 37 N1 ? ? C U 8 C A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? D U 8 O4 ? ? ? 1_555 D A 37 N6 ? ? C U 8 C A 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? D G 9 N1 ? ? ? 1_555 D C 36 N3 ? ? C G 9 C C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? D G 9 N2 ? ? ? 1_555 D C 36 O2 ? ? C G 9 C C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? D G 9 O6 ? ? ? 1_555 D C 36 N4 ? ? C G 9 C C 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? D A 10 N1 ? ? ? 1_555 D U 35 N3 ? ? C A 10 C U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? D A 10 N6 ? ? ? 1_555 D U 35 O4 ? ? C A 10 C U 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? D G 11 N1 ? ? ? 1_555 D C 34 N3 ? ? C G 11 C C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? D G 11 N2 ? ? ? 1_555 D C 34 O2 ? ? C G 11 C C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? D G 11 O6 ? ? ? 1_555 D C 34 N4 ? ? C G 11 C C 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? D G 13 N2 ? ? ? 1_555 D A 21 N1 ? ? C G 13 C A 21 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog110 hydrog ? ? D A 14 N3 ? ? ? 1_555 D A 20 N6 ? ? C A 14 C A 20 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog111 hydrog ? ? D G 15 N3 ? ? ? 1_555 D A 19 N6 ? ? C G 15 C A 19 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog112 hydrog ? ? D C 25 N3 ? ? ? 1_555 F G 5 N1 ? ? C C 25 F G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? D C 25 N4 ? ? ? 1_555 F G 5 O6 ? ? C C 25 F G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? D C 25 O2 ? ? ? 1_555 F G 5 N2 ? ? C C 25 F G 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? D U 26 N3 ? ? ? 1_555 F A 4 N1 ? ? C U 26 F A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? D U 26 O4 ? ? ? 1_555 F A 4 N6 ? ? C U 26 F A 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? D G 27 N1 ? ? ? 1_555 F C 3 N3 ? ? C G 27 F C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? D G 27 N2 ? ? ? 1_555 F C 3 O2 ? ? C G 27 F C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? D G 27 O6 ? ? ? 1_555 F C 3 N4 ? ? C G 27 F C 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? D G 28 N1 ? ? ? 1_555 F C 2 N3 ? ? C G 28 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? D G 28 N2 ? ? ? 1_555 F C 2 O2 ? ? C G 28 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? D G 28 O6 ? ? ? 1_555 F C 2 N4 ? ? C G 28 F C 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? D U 29 N3 ? ? ? 1_555 F U 1 O4 ? ? C U 29 F U 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog124 hydrog ? ? D U 29 O2 ? ? ? 1_555 F U 1 N3 ? ? C U 29 F U 11 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog125 hydrog ? ? D A 31 N1 ? ? ? 1_555 D G 43 N2 ? ? C A 31 C G 43 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog126 hydrog ? ? D G 33 N1 ? ? ? 1_555 D C 41 N3 ? ? C G 33 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? D G 33 N2 ? ? ? 1_555 D C 41 O2 ? ? C G 33 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? D G 33 O6 ? ? ? 1_555 D C 41 N4 ? ? C G 33 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? D G 40 N2 ? ? ? 1_555 D G 42 O6 ? ? C G 40 C G 42 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog130 hydrog ? ? D G 42 O6 ? ? ? 1_555 E 23G 10 N2 ? ? C G 42 D 23G 10 1_555 ? ? ? ? ? ? 'G-23G MISPAIR' ? ? ? hydrog131 hydrog ? ? D G 43 N1 ? ? ? 1_555 E C 9 N3 ? ? C G 43 D C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? D G 43 N2 ? ? ? 1_555 E C 9 O2 ? ? C G 43 D C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? D G 43 O6 ? ? ? 1_555 E C 9 N4 ? ? C G 43 D C 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? D A 44 N1 ? ? ? 1_555 E U 8 N3 ? ? C A 44 D U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? D A 44 N6 ? ? ? 1_555 E U 8 O4 ? ? C A 44 D U 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? D G 45 N1 ? ? ? 1_555 E C 7 N3 ? ? C G 45 D C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? D G 45 N2 ? ? ? 1_555 E C 7 O2 ? ? C G 45 D C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? D G 45 O6 ? ? ? 1_555 E C 7 N4 ? ? C G 45 D C 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? D A 46 N1 ? ? ? 1_555 E U 6 N3 ? ? C A 46 D U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? D A 46 N6 ? ? ? 1_555 E U 6 O4 ? ? C A 46 D U 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? D G 47 N1 ? ? ? 1_555 E C 5 N3 ? ? C G 47 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? D G 47 N2 ? ? ? 1_555 E C 5 O2 ? ? C G 47 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? D G 47 O6 ? ? ? 1_555 E C 5 N4 ? ? C G 47 D C 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? D C 48 N3 ? ? ? 1_555 E G 4 N1 ? ? C C 48 D G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? D C 48 N4 ? ? ? 1_555 E G 4 O6 ? ? C C 48 D G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? D C 48 O2 ? ? ? 1_555 E G 4 N2 ? ? C C 48 D G 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? D A 49 N1 ? ? ? 1_555 E U 3 N3 ? ? C A 49 D U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? D A 49 N6 ? ? ? 1_555 E U 3 O4 ? ? C A 49 D U 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? D G 50 N1 ? ? ? 1_555 E C 2 N3 ? ? C G 50 D C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? D G 50 N2 ? ? ? 1_555 E C 2 O2 ? ? C G 50 D C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? D G 50 O6 ? ? ? 1_555 E C 2 N4 ? ? C G 50 D C 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? A A 23 ? A A 23 ? 1_555 MG ? L MG . ? A MG 106 ? 1_555 OP2 ? A G 24 ? A G 24 ? 1_555 94.0 ? 2 OP1 ? A A 23 ? A A 23 ? 1_555 MG ? L MG . ? A MG 106 ? 1_555 OP1 ? A U 26 ? A U 26 ? 1_555 173.0 ? 3 OP2 ? A G 24 ? A G 24 ? 1_555 MG ? L MG . ? A MG 106 ? 1_555 OP1 ? A U 26 ? A U 26 ? 1_555 87.8 ? 4 N7 ? A G 33 ? A G 33 ? 1_555 MG ? G MG . ? A MG 101 ? 1_555 OC1 ? B 23G 10 ? B 23G 10 ? 1_555 133.1 ? 5 OP2 ? A C 41 ? A C 41 ? 1_555 MG ? M MG . ? A MG 107 ? 1_555 OP2 ? A G 42 ? A G 42 ? 1_555 58.5 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 101 ? 2 'binding site for residue MG A 101' AC2 Software A MG 102 ? 2 'binding site for residue MG A 102' AC3 Software A MG 103 ? 2 'binding site for residue MG A 103' AC4 Software A MG 105 ? 2 'binding site for residue MG A 105' AC5 Software A MG 106 ? 3 'binding site for residue MG A 106' AC6 Software A MG 107 ? 3 'binding site for residue MG A 107' AC7 Software A MG 108 ? 2 'binding site for residue MG A 108' AC8 Software C MG 101 ? 2 'binding site for residue MG C 101' AC9 Software C MG 102 ? 1 'binding site for residue MG C 102' AD1 Software C MG 103 ? 2 'binding site for residue MG C 103' AD2 Software C MG 104 ? 1 'binding site for residue MG C 104' AD3 Software C MG 106 ? 2 'binding site for residue MG C 106' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 G A 33 ? G A 33 . ? 1_555 ? 2 AC1 2 23G B 10 ? 23G B 10 . ? 1_555 ? 3 AC2 2 A A 37 ? A A 37 . ? 1_555 ? 4 AC2 2 A A 38 ? A A 38 . ? 1_555 ? 5 AC3 2 G A 5 ? G A 5 . ? 1_555 ? 6 AC3 2 G A 11 ? G A 11 . ? 1_555 ? 7 AC4 2 C A 22 ? C A 22 . ? 1_555 ? 8 AC4 2 A A 23 ? A A 23 . ? 1_555 ? 9 AC5 3 A A 23 ? A A 23 . ? 1_555 ? 10 AC5 3 G A 24 ? G A 24 . ? 1_555 ? 11 AC5 3 U A 26 ? U A 26 . ? 1_555 ? 12 AC6 3 G A 40 ? G A 40 . ? 1_555 ? 13 AC6 3 C A 41 ? C A 41 . ? 1_555 ? 14 AC6 3 G A 42 ? G A 42 . ? 1_555 ? 15 AC7 2 G A 5 ? G A 5 . ? 1_555 ? 16 AC7 2 U A 7 ? U A 7 . ? 1_555 ? 17 AC8 2 G D 33 ? G C 33 . ? 1_555 ? 18 AC8 2 23G E 10 ? 23G D 10 . ? 1_555 ? 19 AC9 1 A D 38 ? A C 38 . ? 1_555 ? 20 AD1 2 C D 41 ? C C 41 . ? 1_555 ? 21 AD1 2 G D 42 ? G C 42 . ? 1_555 ? 22 AD2 1 U D 7 ? U C 7 . ? 1_555 ? 23 AD3 2 A D 23 ? A C 23 . ? 1_555 ? 24 AD3 2 U D 26 ? U C 26 . ? 1_555 ? # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 203.3762 222.7444 135.8415 1.2583 ? 0.0669 ? -0.1275 ? 0.6163 ? -0.0160 ? 0.6739 ? 1.2420 ? -0.4302 ? 0.8192 ? 0.7623 ? 0.5849 ? 4.0417 ? -0.2051 ? -0.0647 ? 0.1983 ? 0.0050 ? -0.1357 ? 0.3168 ? -1.2176 ? 0.4238 ? 0.3386 ? 2 'X-RAY DIFFRACTION' ? refined 213.8373 229.5806 142.5385 1.5942 ? -0.2856 ? -0.2055 ? 1.3013 ? 0.0137 ? 0.8030 ? 0.3711 ? -0.0021 ? 0.5914 ? 0.1712 ? -0.0425 ? 0.9308 ? -0.1979 ? 0.5083 ? 0.2948 ? -0.7429 ? 0.0033 ? 0.0019 ? -1.7529 ? 1.1508 ? 0.1031 ? 3 'X-RAY DIFFRACTION' ? refined 179.6318 202.0176 109.8208 0.6423 ? 0.2915 ? -0.1396 ? 0.8487 ? -0.0582 ? 0.6717 ? 0.6819 ? 0.2005 ? -0.3777 ? 2.9363 ? 0.0689 ? 2.9318 ? -0.2428 ? -0.0621 ? 0.3479 ? 0.0022 ? 0.2318 ? -0.0211 ? -0.2407 ? -0.8227 ? 0.0172 ? 4 'X-RAY DIFFRACTION' ? refined 172.6451 192.9696 101.4341 0.6883 ? 0.0361 ? -0.0600 ? 0.9445 ? -0.0439 ? 0.5142 ? 0.9689 ? 0.0785 ? -1.0213 ? 2.6600 ? 0.1088 ? 1.9268 ? -0.2434 ? 0.1168 ? 0.1569 ? -0.1616 ? 0.2507 ? 0.1350 ? 0.4088 ? -1.1698 ? -0.0739 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A 1 ? ? A 50 ? ;chain 'A' and (resid 1 through 50 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? B 1 ? ? B 15 ? ;chain 'B' and (resid 1 through 15 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? C 1 ? ? C 50 ? ;chain 'C' and (resid 1 through 50 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? D 1 ? ? D 15 ? ;chain 'D' and (resid 1 through 15 ) ; # _pdbx_entry_details.entry_id 6UFJ _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A A 51 ? A A 51 2 1 Y 1 C A 51 ? D A 51 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 23G P P N N 1 23G N1 N N N 2 23G C2 C N N 3 23G N2 N N N 4 23G N3 N N N 5 23G C4 C Y N 6 23G C5 C Y N 7 23G C6 C N N 8 23G O6 O N N 9 23G N7 N Y N 10 23G C8 C Y N 11 23G N9 N Y N 12 23G PC P N N 13 23G "C1'" C N R 14 23G "C2'" C N R 15 23G "O2'" O N N 16 23G "C3'" C N R 17 23G "O3'" O N N 18 23G "C4'" C N R 19 23G "O4'" O N N 20 23G "C5'" C N N 21 23G "O5'" O N N 22 23G OC1 O N N 23 23G OC2 O N N 24 23G OP1 O N N 25 23G OP2 O N N 26 23G HN1 H N N 27 23G HN2 H N N 28 23G HN2A H N N 29 23G H8 H N N 30 23G "H1'" H N N 31 23G "H2'" H N N 32 23G "H3'" H N N 33 23G "H4'" H N N 34 23G "H5'" H N N 35 23G "H5'A" H N N 36 23G OP3 O N N 37 23G H11 H N N 38 23G HOP2 H N N 39 23G HOP3 H N N 40 A OP3 O N N 41 A P P N N 42 A OP1 O N N 43 A OP2 O N N 44 A "O5'" O N N 45 A "C5'" C N N 46 A "C4'" C N R 47 A "O4'" O N N 48 A "C3'" C N S 49 A "O3'" O N N 50 A "C2'" C N R 51 A "O2'" O N N 52 A "C1'" C N R 53 A N9 N Y N 54 A C8 C Y N 55 A N7 N Y N 56 A C5 C Y N 57 A C6 C Y N 58 A N6 N N N 59 A N1 N Y N 60 A C2 C Y N 61 A N3 N Y N 62 A C4 C Y N 63 A HOP3 H N N 64 A HOP2 H N N 65 A "H5'" H N N 66 A "H5''" H N N 67 A "H4'" H N N 68 A "H3'" H N N 69 A "HO3'" H N N 70 A "H2'" H N N 71 A "HO2'" H N N 72 A "H1'" H N N 73 A H8 H N N 74 A H61 H N N 75 A H62 H N N 76 A H2 H N N 77 C OP3 O N N 78 C P P N N 79 C OP1 O N N 80 C OP2 O N N 81 C "O5'" O N N 82 C "C5'" C N N 83 C "C4'" C N R 84 C "O4'" O N N 85 C "C3'" C N S 86 C "O3'" O N N 87 C "C2'" C N R 88 C "O2'" O N N 89 C "C1'" C N R 90 C N1 N N N 91 C C2 C N N 92 C O2 O N N 93 C N3 N N N 94 C C4 C N N 95 C N4 N N N 96 C C5 C N N 97 C C6 C N N 98 C HOP3 H N N 99 C HOP2 H N N 100 C "H5'" H N N 101 C "H5''" H N N 102 C "H4'" H N N 103 C "H3'" H N N 104 C "HO3'" H N N 105 C "H2'" H N N 106 C "HO2'" H N N 107 C "H1'" H N N 108 C H41 H N N 109 C H42 H N N 110 C H5 H N N 111 C H6 H N N 112 G OP3 O N N 113 G P P N N 114 G OP1 O N N 115 G OP2 O N N 116 G "O5'" O N N 117 G "C5'" C N N 118 G "C4'" C N R 119 G "O4'" O N N 120 G "C3'" C N S 121 G "O3'" O N N 122 G "C2'" C N R 123 G "O2'" O N N 124 G "C1'" C N R 125 G N9 N Y N 126 G C8 C Y N 127 G N7 N Y N 128 G C5 C Y N 129 G C6 C N N 130 G O6 O N N 131 G N1 N N N 132 G C2 C N N 133 G N2 N N N 134 G N3 N N N 135 G C4 C Y N 136 G HOP3 H N N 137 G HOP2 H N N 138 G "H5'" H N N 139 G "H5''" H N N 140 G "H4'" H N N 141 G "H3'" H N N 142 G "HO3'" H N N 143 G "H2'" H N N 144 G "HO2'" H N N 145 G "H1'" H N N 146 G H8 H N N 147 G H1 H N N 148 G H21 H N N 149 G H22 H N N 150 HOH O O N N 151 HOH H1 H N N 152 HOH H2 H N N 153 MG MG MG N N 154 U OP3 O N N 155 U P P N N 156 U OP1 O N N 157 U OP2 O N N 158 U "O5'" O N N 159 U "C5'" C N N 160 U "C4'" C N R 161 U "O4'" O N N 162 U "C3'" C N S 163 U "O3'" O N N 164 U "C2'" C N R 165 U "O2'" O N N 166 U "C1'" C N R 167 U N1 N N N 168 U C2 C N N 169 U O2 O N N 170 U N3 N N N 171 U C4 C N N 172 U O4 O N N 173 U C5 C N N 174 U C6 C N N 175 U HOP3 H N N 176 U HOP2 H N N 177 U "H5'" H N N 178 U "H5''" H N N 179 U "H4'" H N N 180 U "H3'" H N N 181 U "HO3'" H N N 182 U "H2'" H N N 183 U "HO2'" H N N 184 U "H1'" H N N 185 U H3 H N N 186 U H5 H N N 187 U H6 H N N 188 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 23G P "O5'" sing N N 1 23G P OP1 doub N N 2 23G P OP2 sing N N 3 23G N1 C2 sing N N 4 23G N1 C6 sing N N 5 23G N1 HN1 sing N N 6 23G C2 N2 sing N N 7 23G C2 N3 doub N N 8 23G N2 HN2 sing N N 9 23G N2 HN2A sing N N 10 23G N3 C4 sing N N 11 23G C4 C5 doub Y N 12 23G C4 N9 sing Y N 13 23G C5 C6 sing N N 14 23G C5 N7 sing Y N 15 23G C6 O6 doub N N 16 23G N7 C8 doub Y N 17 23G C8 N9 sing Y N 18 23G C8 H8 sing N N 19 23G N9 "C1'" sing N N 20 23G PC "O2'" sing N N 21 23G PC "O3'" sing N N 22 23G PC OC1 sing N N 23 23G PC OC2 doub N N 24 23G "C1'" "C2'" sing N N 25 23G "C1'" "O4'" sing N N 26 23G "C1'" "H1'" sing N N 27 23G "C2'" "O2'" sing N N 28 23G "C2'" "C3'" sing N N 29 23G "C2'" "H2'" sing N N 30 23G "C3'" "O3'" sing N N 31 23G "C3'" "C4'" sing N N 32 23G "C3'" "H3'" sing N N 33 23G "C4'" "O4'" sing N N 34 23G "C4'" "C5'" sing N N 35 23G "C4'" "H4'" sing N N 36 23G "C5'" "O5'" sing N N 37 23G "C5'" "H5'" sing N N 38 23G "C5'" "H5'A" sing N N 39 23G P OP3 sing N N 40 23G OC1 H11 sing N N 41 23G OP2 HOP2 sing N N 42 23G OP3 HOP3 sing N N 43 A OP3 P sing N N 44 A OP3 HOP3 sing N N 45 A P OP1 doub N N 46 A P OP2 sing N N 47 A P "O5'" sing N N 48 A OP2 HOP2 sing N N 49 A "O5'" "C5'" sing N N 50 A "C5'" "C4'" sing N N 51 A "C5'" "H5'" sing N N 52 A "C5'" "H5''" sing N N 53 A "C4'" "O4'" sing N N 54 A "C4'" "C3'" sing N N 55 A "C4'" "H4'" sing N N 56 A "O4'" "C1'" sing N N 57 A "C3'" "O3'" sing N N 58 A "C3'" "C2'" sing N N 59 A "C3'" "H3'" sing N N 60 A "O3'" "HO3'" sing N N 61 A "C2'" "O2'" sing N N 62 A "C2'" "C1'" sing N N 63 A "C2'" "H2'" sing N N 64 A "O2'" "HO2'" sing N N 65 A "C1'" N9 sing N N 66 A "C1'" "H1'" sing N N 67 A N9 C8 sing Y N 68 A N9 C4 sing Y N 69 A C8 N7 doub Y N 70 A C8 H8 sing N N 71 A N7 C5 sing Y N 72 A C5 C6 sing Y N 73 A C5 C4 doub Y N 74 A C6 N6 sing N N 75 A C6 N1 doub Y N 76 A N6 H61 sing N N 77 A N6 H62 sing N N 78 A N1 C2 sing Y N 79 A C2 N3 doub Y N 80 A C2 H2 sing N N 81 A N3 C4 sing Y N 82 C OP3 P sing N N 83 C OP3 HOP3 sing N N 84 C P OP1 doub N N 85 C P OP2 sing N N 86 C P "O5'" sing N N 87 C OP2 HOP2 sing N N 88 C "O5'" "C5'" sing N N 89 C "C5'" "C4'" sing N N 90 C "C5'" "H5'" sing N N 91 C "C5'" "H5''" sing N N 92 C "C4'" "O4'" sing N N 93 C "C4'" "C3'" sing N N 94 C "C4'" "H4'" sing N N 95 C "O4'" "C1'" sing N N 96 C "C3'" "O3'" sing N N 97 C "C3'" "C2'" sing N N 98 C "C3'" "H3'" sing N N 99 C "O3'" "HO3'" sing N N 100 C "C2'" "O2'" sing N N 101 C "C2'" "C1'" sing N N 102 C "C2'" "H2'" sing N N 103 C "O2'" "HO2'" sing N N 104 C "C1'" N1 sing N N 105 C "C1'" "H1'" sing N N 106 C N1 C2 sing N N 107 C N1 C6 sing N N 108 C C2 O2 doub N N 109 C C2 N3 sing N N 110 C N3 C4 doub N N 111 C C4 N4 sing N N 112 C C4 C5 sing N N 113 C N4 H41 sing N N 114 C N4 H42 sing N N 115 C C5 C6 doub N N 116 C C5 H5 sing N N 117 C C6 H6 sing N N 118 G OP3 P sing N N 119 G OP3 HOP3 sing N N 120 G P OP1 doub N N 121 G P OP2 sing N N 122 G P "O5'" sing N N 123 G OP2 HOP2 sing N N 124 G "O5'" "C5'" sing N N 125 G "C5'" "C4'" sing N N 126 G "C5'" "H5'" sing N N 127 G "C5'" "H5''" sing N N 128 G "C4'" "O4'" sing N N 129 G "C4'" "C3'" sing N N 130 G "C4'" "H4'" sing N N 131 G "O4'" "C1'" sing N N 132 G "C3'" "O3'" sing N N 133 G "C3'" "C2'" sing N N 134 G "C3'" "H3'" sing N N 135 G "O3'" "HO3'" sing N N 136 G "C2'" "O2'" sing N N 137 G "C2'" "C1'" sing N N 138 G "C2'" "H2'" sing N N 139 G "O2'" "HO2'" sing N N 140 G "C1'" N9 sing N N 141 G "C1'" "H1'" sing N N 142 G N9 C8 sing Y N 143 G N9 C4 sing Y N 144 G C8 N7 doub Y N 145 G C8 H8 sing N N 146 G N7 C5 sing Y N 147 G C5 C6 sing N N 148 G C5 C4 doub Y N 149 G C6 O6 doub N N 150 G C6 N1 sing N N 151 G N1 C2 sing N N 152 G N1 H1 sing N N 153 G C2 N2 sing N N 154 G C2 N3 doub N N 155 G N2 H21 sing N N 156 G N2 H22 sing N N 157 G N3 C4 sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 U OP3 P sing N N 161 U OP3 HOP3 sing N N 162 U P OP1 doub N N 163 U P OP2 sing N N 164 U P "O5'" sing N N 165 U OP2 HOP2 sing N N 166 U "O5'" "C5'" sing N N 167 U "C5'" "C4'" sing N N 168 U "C5'" "H5'" sing N N 169 U "C5'" "H5''" sing N N 170 U "C4'" "O4'" sing N N 171 U "C4'" "C3'" sing N N 172 U "C4'" "H4'" sing N N 173 U "O4'" "C1'" sing N N 174 U "C3'" "O3'" sing N N 175 U "C3'" "C2'" sing N N 176 U "C3'" "H3'" sing N N 177 U "O3'" "HO3'" sing N N 178 U "C2'" "O2'" sing N N 179 U "C2'" "C1'" sing N N 180 U "C2'" "H2'" sing N N 181 U "O2'" "HO2'" sing N N 182 U "C1'" N1 sing N N 183 U "C1'" "H1'" sing N N 184 U N1 C2 sing N N 185 U N1 C6 sing N N 186 U C2 O2 doub N N 187 U C2 N3 sing N N 188 U N3 C4 sing N N 189 U N3 H3 sing N N 190 U C4 O4 doub N N 191 U C4 C5 sing N N 192 U C5 C6 doub N N 193 U C5 H5 sing N N 194 U C6 H6 sing N N 195 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6UFJ 'double helix' 6UFJ 'a-form double helix' 6UFJ 'bulge loop' 6UFJ 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 25 1_555 C G 5 1_555 0.393 -0.205 0.214 0.597 -5.244 -1.232 1 A_C25:G15_E A 25 ? E 15 ? 19 1 1 A U 26 1_555 C A 4 1_555 0.502 0.059 -0.073 2.610 -5.194 -0.698 2 A_U26:A14_E A 26 ? E 14 ? 20 1 1 A G 27 1_555 C C 3 1_555 0.685 -0.046 0.251 10.259 -5.266 -0.725 3 A_G27:C13_E A 27 ? E 13 ? 19 1 1 A G 28 1_555 C C 2 1_555 -0.175 -0.050 0.062 9.050 -7.232 9.093 4 A_G28:C12_E A 28 ? E 12 ? 19 1 1 A U 29 1_555 C U 1 1_555 2.933 -2.116 0.272 10.964 -14.840 11.974 5 A_U29:U11_E A 29 ? E 11 ? 16 1 1 B C 2 1_555 A G 50 1_555 -0.462 0.242 -0.686 0.351 -1.782 5.792 6 B_C2:G50_A B 2 ? A 50 ? 19 1 1 B U 3 1_555 A A 49 1_555 0.037 -0.223 0.231 0.498 11.253 7.555 7 B_U3:A49_A B 3 ? A 49 ? 20 1 1 B G 4 1_555 A C 48 1_555 -1.027 -0.022 0.132 9.781 -7.180 13.672 8 B_G4:C48_A B 4 ? A 48 ? 19 1 1 B C 5 1_555 A G 47 1_555 -0.227 -0.189 -0.281 11.506 -9.448 1.451 9 B_C5:G47_A B 5 ? A 47 ? 19 1 1 B U 6 1_555 A A 46 1_555 -0.115 -0.373 0.360 1.317 -0.717 3.017 10 B_U6:A46_A B 6 ? A 46 ? 20 1 1 B C 7 1_555 A G 45 1_555 0.052 -0.062 -0.023 4.018 -12.879 5.345 11 B_C7:G45_A B 7 ? A 45 ? 19 1 1 B U 8 1_555 A A 44 1_555 0.718 0.023 0.104 5.715 -11.144 2.613 12 B_U8:A44_A B 8 ? A 44 ? 20 1 1 B C 9 1_555 A G 43 1_555 0.038 0.000 -0.240 8.616 -4.444 1.649 13 B_C9:G43_A B 9 ? A 43 ? 19 1 1 A G 40 1_555 A G 42 1_555 5.767 -1.127 -1.657 5.862 -2.770 -37.368 14 A_G40:G42_A A 40 ? A 42 ? ? ? 1 A G 33 1_555 A C 41 1_555 0.359 0.177 0.099 5.015 -1.380 5.531 15 A_G33:C41_A A 33 ? A 41 ? 19 1 1 A U 6 1_555 A A 39 1_555 -0.196 -0.094 0.068 17.614 -19.963 -3.455 16 A_U6:A39_A A 6 ? A 39 ? 20 1 1 A U 7 1_555 A A 38 1_555 -0.821 -0.042 -0.132 -0.124 -25.162 1.208 17 A_U7:A38_A A 7 ? A 38 ? 20 1 1 A U 8 1_555 A A 37 1_555 0.176 -0.124 0.054 0.688 -4.402 2.711 18 A_U8:A37_A A 8 ? A 37 ? 20 1 1 A G 9 1_555 A C 36 1_555 0.163 -0.157 -0.414 1.653 -8.442 3.265 19 A_G9:C36_A A 9 ? A 36 ? 19 1 1 A A 10 1_555 A U 35 1_555 0.542 -0.133 0.013 -3.634 -10.854 8.426 20 A_A10:U35_A A 10 ? A 35 ? 20 1 1 A G 11 1_555 A C 34 1_555 0.404 -0.037 -0.655 -22.154 -19.081 2.606 21 A_G11:C34_A A 11 ? A 34 ? 19 1 1 A C 12 1_555 A G 5 1_555 -0.235 -0.202 0.359 -15.218 -5.391 1.739 22 A_C12:G5_A A 12 ? A 5 ? 19 1 1 A G 13 1_555 A C 4 1_555 -0.250 -0.192 0.233 -7.211 -9.266 3.543 23 A_G13:C4_A A 13 ? A 4 ? 19 1 1 A A 14 1_555 A U 3 1_555 -0.579 -0.286 0.601 -1.890 -12.223 4.836 24 A_A14:U3_A A 14 ? A 3 ? 20 1 1 A G 15 1_555 A C 2 1_555 -0.240 -0.069 0.438 1.424 -20.735 8.191 25 A_G15:C2_A A 15 ? A 2 ? 19 1 1 D A 1 1_555 D U 16 1_555 0.216 -0.151 0.045 -2.747 -11.022 -1.816 26 C_A1:U16_C C 1 ? C 16 ? 20 1 1 D C 2 1_555 D G 15 1_555 0.854 -0.136 0.325 -0.811 -16.858 5.502 27 C_C2:G15_C C 2 ? C 15 ? 19 1 1 D U 3 1_555 D A 14 1_555 -0.220 -0.377 0.181 1.829 -5.819 0.972 28 C_U3:A14_C C 3 ? C 14 ? 20 1 1 D C 4 1_555 D G 13 1_555 0.042 -0.114 0.030 7.319 -5.641 2.847 29 C_C4:G13_C C 4 ? C 13 ? 19 1 1 D G 5 1_555 D C 12 1_555 -0.450 -0.116 -0.320 6.035 3.031 0.127 30 C_G5:C12_C C 5 ? C 12 ? 19 1 1 D C 34 1_555 D G 11 1_555 -0.227 -0.028 -0.723 17.631 -23.111 5.283 31 C_C34:G11_C C 34 ? C 11 ? 19 1 1 D U 35 1_555 D A 10 1_555 -0.736 -0.140 0.183 -0.711 -7.336 2.947 32 C_U35:A10_C C 35 ? C 10 ? 20 1 1 D C 36 1_555 D G 9 1_555 0.011 -0.102 -0.300 -2.721 -11.851 1.268 33 C_C36:G9_C C 36 ? C 9 ? 19 1 1 D A 37 1_555 D U 8 1_555 0.658 0.027 -0.193 -7.630 -5.831 -1.439 34 C_A37:U8_C C 37 ? C 8 ? 20 1 1 D A 38 1_555 D U 7 1_555 0.959 -0.132 0.121 0.981 -19.073 5.056 35 C_A38:U7_C C 38 ? C 7 ? 20 1 1 D A 39 1_555 D U 6 1_555 -0.108 0.089 0.139 -12.721 -23.600 3.741 36 C_A39:U6_C C 39 ? C 6 ? 20 1 1 D C 41 1_555 D G 33 1_555 0.752 -0.167 0.324 -7.662 -2.998 0.002 37 C_C41:G33_C C 41 ? C 33 ? 19 1 1 D G 42 1_555 E 23G 10 1_555 -7.138 -2.313 -1.056 6.983 3.932 13.466 38 C_G42:23G10_D C 42 ? D 10 ? ? ? 1 D G 43 1_555 E C 9 1_555 -0.453 -0.353 -0.063 -7.077 -4.849 -3.240 39 C_G43:C9_D C 43 ? D 9 ? 19 1 1 D A 44 1_555 E U 8 1_555 -0.419 0.015 0.068 -4.905 -7.461 5.519 40 C_A44:U8_D C 44 ? D 8 ? 20 1 1 D G 45 1_555 E C 7 1_555 -0.139 -0.040 0.287 -1.951 -14.074 7.712 41 C_G45:C7_D C 45 ? D 7 ? 19 1 1 D A 46 1_555 E U 6 1_555 0.297 -0.275 0.213 2.036 -8.340 -3.067 42 C_A46:U6_D C 46 ? D 6 ? 20 1 1 D G 47 1_555 E C 5 1_555 0.400 -0.364 0.251 -6.569 -8.089 1.115 43 C_G47:C5_D C 47 ? D 5 ? 19 1 1 D C 48 1_555 E G 4 1_555 0.859 -0.278 0.154 -7.473 -6.823 6.907 44 C_C48:G4_D C 48 ? D 4 ? 19 1 1 D A 49 1_555 E U 3 1_555 -0.103 -0.169 -0.360 -8.158 -9.406 7.942 45 C_A49:U3_D C 49 ? D 3 ? 20 1 1 D G 50 1_555 E C 2 1_555 1.018 0.081 -0.117 -2.197 -0.639 2.523 46 C_G50:C2_D C 50 ? D 2 ? 19 1 1 D C 25 1_555 F G 5 1_555 -0.100 -0.362 0.344 -6.096 -6.537 -0.232 47 C_C25:G15_F C 25 ? F 15 ? 19 1 1 D U 26 1_555 F A 4 1_555 -0.122 -0.231 0.129 0.907 -6.155 2.681 48 C_U26:A14_F C 26 ? F 14 ? 20 1 1 D G 27 1_555 F C 3 1_555 0.284 -0.330 0.381 6.451 -7.488 0.660 49 C_G27:C13_F C 27 ? F 13 ? 19 1 1 D G 28 1_555 F C 2 1_555 -0.041 -0.300 0.004 7.804 -5.553 -0.158 50 C_G28:C12_F C 28 ? F 12 ? 19 1 1 D U 29 1_555 F U 1 1_555 2.969 -2.169 0.408 13.247 -14.493 11.743 51 C_U29:U11_F C 29 ? F 11 ? 16 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 25 1_555 C G 5 1_555 A U 26 1_555 C A 4 1_555 -0.286 -1.703 3.171 0.225 5.218 29.197 -4.344 0.602 2.828 10.247 -0.442 29.651 1 AA_C25U26:A14G15_EE A 25 ? E 15 ? A 26 ? E 14 ? 1 A U 26 1_555 C A 4 1_555 A G 27 1_555 C C 3 1_555 0.018 -1.351 3.047 -0.015 6.522 33.271 -3.255 -0.033 2.741 11.256 0.025 33.886 2 AA_U26G27:C13A14_EE A 26 ? E 14 ? A 27 ? E 13 ? 1 A G 27 1_555 C C 3 1_555 A G 28 1_555 C C 2 1_555 0.949 -1.868 3.157 2.435 7.944 24.228 -6.226 -1.527 2.509 18.253 -5.594 25.593 3 AA_G27G28:C12C13_EE A 27 ? E 13 ? A 28 ? E 12 ? 1 A G 28 1_555 C C 2 1_555 A U 29 1_555 C U 1 1_555 0.382 -1.054 3.112 -2.316 4.014 44.154 -1.744 -0.706 2.988 5.323 3.070 44.384 4 AA_G28U29:U11C12_EE A 28 ? E 12 ? A 29 ? E 11 ? 1 B C 2 1_555 A G 50 1_555 B U 3 1_555 A A 49 1_555 0.242 -1.684 3.374 -8.268 8.333 35.063 -3.750 -1.464 2.790 13.376 13.272 36.917 5 BB_C2U3:A49G50_AA B 2 ? A 50 ? B 3 ? A 49 ? 1 B U 3 1_555 A A 49 1_555 B G 4 1_555 A C 48 1_555 0.280 -1.668 2.786 2.827 6.366 25.786 -4.934 -0.019 2.331 13.944 -6.192 26.695 6 BB_U3G4:C48A49_AA B 3 ? A 49 ? B 4 ? A 48 ? 1 B G 4 1_555 A C 48 1_555 B C 5 1_555 A G 47 1_555 -1.049 -1.437 2.972 -1.157 8.373 31.546 -3.807 1.695 2.553 15.065 2.082 32.631 7 BB_G4C5:G47C48_AA B 4 ? A 48 ? B 5 ? A 47 ? 1 B C 5 1_555 A G 47 1_555 B U 6 1_555 A A 46 1_555 -0.624 -1.762 3.414 -8.644 15.715 32.325 -4.823 -0.132 2.418 25.892 14.241 36.851 8 BB_C5U6:A46G47_AA B 5 ? A 47 ? B 6 ? A 46 ? 1 B U 6 1_555 A A 46 1_555 B C 7 1_555 A G 45 1_555 -0.612 -1.653 3.081 1.592 6.156 30.540 -4.117 1.408 2.670 11.529 -2.981 31.180 9 BB_U6C7:G45A46_AA B 6 ? A 46 ? B 7 ? A 45 ? 1 B C 7 1_555 A G 45 1_555 B U 8 1_555 A A 44 1_555 -0.134 -1.456 3.150 -2.072 8.081 32.196 -3.780 -0.082 2.718 14.274 3.660 33.231 10 BB_C7U8:A44G45_AA B 7 ? A 45 ? B 8 ? A 44 ? 1 B U 8 1_555 A A 44 1_555 B C 9 1_555 A G 43 1_555 0.058 -1.904 3.078 0.005 4.508 31.462 -4.222 -0.105 2.785 8.261 -0.009 31.776 11 BB_U8C9:G43A44_AA B 8 ? A 44 ? B 9 ? A 43 ? 1 B C 9 1_555 A G 43 1_555 A G 40 1_555 A G 42 1_555 2.794 -5.540 1.158 -134.216 -86.268 38.980 -2.394 -2.064 0.999 -46.801 72.812 160.733 12 BA_C9G40:G42G43_AA B 9 ? A 43 ? A 40 ? A 42 ? 1 A G 40 1_555 A G 42 1_555 A G 33 1_555 A C 41 1_555 -0.396 -2.072 -4.475 168.041 -42.328 156.001 -1.149 -0.251 -4.352 -21.182 -84.091 178.606 13 AA_G40G33:C41G42_AA A 40 ? A 42 ? A 33 ? A 41 ? 1 A G 33 1_555 A C 41 1_555 A U 6 1_555 A A 39 1_555 0.924 -2.468 2.643 -1.749 7.437 63.170 -2.592 -0.936 2.346 7.072 1.663 63.583 14 AA_G33U6:A39C41_AA A 33 ? A 41 ? A 6 ? A 39 ? 1 A U 6 1_555 A A 39 1_555 A U 7 1_555 A A 38 1_555 -1.024 -2.228 3.408 -4.653 15.923 27.096 -6.695 1.111 1.973 30.615 8.945 31.689 15 AA_U6U7:A38A39_AA A 6 ? A 39 ? A 7 ? A 38 ? 1 A U 7 1_555 A A 38 1_555 A U 8 1_555 A A 37 1_555 -0.877 -1.102 3.210 -6.144 14.684 34.093 -3.521 0.608 2.646 23.522 9.841 37.526 16 AA_U7U8:A37A38_AA A 7 ? A 38 ? A 8 ? A 37 ? 1 A U 8 1_555 A A 37 1_555 A G 9 1_555 A C 36 1_555 0.401 -1.075 3.199 4.546 16.404 33.343 -3.669 -0.075 2.456 26.547 -7.358 37.327 17 AA_U8G9:C36A37_AA A 8 ? A 37 ? A 9 ? A 36 ? 1 A G 9 1_555 A C 36 1_555 A A 10 1_555 A U 35 1_555 0.834 -1.223 3.242 -0.283 11.661 32.403 -3.760 -1.452 2.650 20.101 0.488 34.385 18 AA_G9A10:U35C36_AA A 9 ? A 36 ? A 10 ? A 35 ? 1 A A 10 1_555 A U 35 1_555 A G 11 1_555 A C 34 1_555 0.474 -2.053 3.723 7.723 17.086 28.273 -6.275 0.427 2.216 31.036 -14.029 33.820 19 AA_A10G11:C34U35_AA A 10 ? A 35 ? A 11 ? A 34 ? 1 A G 11 1_555 A C 34 1_555 A C 12 1_555 A G 5 1_555 1.833 -0.758 2.927 -3.946 2.381 44.780 -1.175 -2.702 2.722 3.116 5.163 45.004 20 AA_G11C12:G5C34_AA A 11 ? A 34 ? A 12 ? A 5 ? 1 A C 12 1_555 A G 5 1_555 A G 13 1_555 A C 4 1_555 1.034 -1.703 2.884 0.289 13.804 29.999 -4.823 -1.784 1.943 25.066 -0.524 32.958 21 AA_C12G13:C4G5_AA A 12 ? A 5 ? A 13 ? A 4 ? 1 A G 13 1_555 A C 4 1_555 A A 14 1_555 A U 3 1_555 0.174 -1.802 3.066 -1.710 3.366 28.096 -4.383 -0.713 2.820 6.893 3.501 28.343 22 AA_G13A14:U3C4_AA A 13 ? A 4 ? A 14 ? A 3 ? 1 A A 14 1_555 A U 3 1_555 A G 15 1_555 A C 2 1_555 0.405 -1.009 3.008 2.673 6.147 37.597 -2.242 -0.315 2.835 9.446 -4.107 38.168 23 AA_A14G15:C2U3_AA A 14 ? A 3 ? A 15 ? A 2 ? 1 A G 15 1_555 A C 2 1_555 D A 1 1_555 D U 16 1_555 -0.938 -3.683 2.941 9.540 12.369 95.405 -2.649 0.766 2.491 8.319 -6.416 96.369 24 AC_G15A1:U16C2_CA A 15 ? A 2 ? C 1 ? C 16 ? 1 D A 1 1_555 D U 16 1_555 D C 2 1_555 D G 15 1_555 0.867 -1.177 3.125 -1.146 13.038 34.763 -3.408 -1.500 2.509 20.927 1.839 37.074 25 CC_A1C2:G15U16_CC C 1 ? C 16 ? C 2 ? C 15 ? 1 D C 2 1_555 D G 15 1_555 D U 3 1_555 D A 14 1_555 -0.291 -1.329 3.035 -0.791 5.197 28.777 -3.639 0.422 2.764 10.348 1.575 29.243 26 CC_C2U3:A14G15_CC C 2 ? C 15 ? C 3 ? C 14 ? 1 D U 3 1_555 D A 14 1_555 D C 4 1_555 D G 13 1_555 -0.033 -1.708 3.195 0.088 0.391 30.442 -3.328 0.080 3.173 0.744 -0.169 30.445 27 CC_U3C4:G13A14_CC C 3 ? C 14 ? C 4 ? C 13 ? 1 D C 4 1_555 D G 13 1_555 D G 5 1_555 D C 12 1_555 -0.788 -1.803 3.322 1.039 15.318 27.791 -5.782 1.612 2.043 29.237 -1.983 31.677 28 CC_C4G5:C12G13_CC C 4 ? C 13 ? C 5 ? C 12 ? 1 D G 5 1_555 D C 12 1_555 D C 34 1_555 D G 11 1_555 -1.735 -0.544 2.824 4.124 1.503 49.542 -0.739 2.317 2.664 1.790 -4.910 49.724 29 CC_G5C34:G11C12_CC C 5 ? C 12 ? C 34 ? C 11 ? 1 D C 34 1_555 D G 11 1_555 D U 35 1_555 D A 10 1_555 -0.616 -1.945 3.679 -11.359 18.792 29.042 -5.761 -0.605 2.166 32.290 19.518 36.266 30 CC_C34U35:A10G11_CC C 34 ? C 11 ? C 35 ? C 10 ? 1 D U 35 1_555 D A 10 1_555 D C 36 1_555 D G 9 1_555 -0.652 -1.354 3.165 2.008 10.628 34.463 -3.548 1.310 2.606 17.415 -3.290 36.072 31 CC_U35C36:G9A10_CC C 35 ? C 10 ? C 36 ? C 9 ? 1 D C 36 1_555 D G 9 1_555 D A 37 1_555 D U 8 1_555 -0.961 -0.980 3.350 -3.264 22.409 35.931 -3.575 1.010 2.435 32.646 4.755 42.272 32 CC_C36A37:U8G9_CC C 36 ? C 9 ? C 37 ? C 8 ? 1 D A 37 1_555 D U 8 1_555 D A 38 1_555 D U 7 1_555 0.971 -1.281 3.053 2.095 9.759 31.223 -3.765 -1.402 2.603 17.577 -3.774 32.742 33 CC_A37A38:U7U8_CC C 37 ? C 8 ? C 38 ? C 7 ? 1 D A 38 1_555 D U 7 1_555 D A 39 1_555 D U 6 1_555 0.860 -2.357 3.321 7.629 11.055 26.697 -6.687 -0.216 2.337 22.241 -15.348 29.830 34 CC_A38A39:U6U7_CC C 38 ? C 7 ? C 39 ? C 6 ? 1 D A 39 1_555 D U 6 1_555 D C 41 1_555 D G 33 1_555 -1.560 -2.645 2.757 2.278 10.635 67.681 -2.662 1.453 2.322 9.486 -2.031 68.446 35 CC_A39C41:G33U6_CC C 39 ? C 6 ? C 41 ? C 33 ? 1 D C 41 1_555 D G 33 1_555 D G 42 1_555 E 23G 10 1_555 4.448 0.362 3.629 -0.485 -1.354 33.347 0.877 -7.833 3.549 -2.358 0.845 33.377 36 CC_C41G42:23G10G33_DC C 41 ? C 33 ? C 42 ? D 10 ? 1 D G 42 1_555 E 23G 10 1_555 D G 43 1_555 E C 9 1_555 -0.239 -1.048 4.097 -10.701 6.506 55.782 -1.543 -0.483 3.944 6.858 11.280 57.061 37 CC_G42G43:C923G10_DD C 42 ? D 10 ? C 43 ? D 9 ? 1 D G 43 1_555 E C 9 1_555 D A 44 1_555 E U 8 1_555 0.395 -1.938 3.068 0.385 7.871 33.301 -4.381 -0.620 2.561 13.501 -0.660 34.195 38 CC_G43A44:U8C9_DD C 43 ? D 9 ? C 44 ? D 8 ? 1 D A 44 1_555 E U 8 1_555 D G 45 1_555 E C 7 1_555 -0.016 -1.395 3.098 -0.024 5.766 32.168 -3.390 0.024 2.812 10.302 0.043 32.667 39 CC_A44G45:C7U8_DD C 44 ? D 8 ? C 45 ? D 7 ? 1 D G 45 1_555 E C 7 1_555 D A 46 1_555 E U 6 1_555 -0.145 -1.622 3.056 1.633 4.887 31.650 -3.726 0.526 2.770 8.886 -2.969 32.056 40 CC_G45A46:U6C7_DD C 45 ? D 7 ? C 46 ? D 6 ? 1 D A 46 1_555 E U 6 1_555 D G 47 1_555 E C 5 1_555 0.980 -1.731 3.436 4.747 13.003 31.120 -4.983 -0.939 2.641 22.872 -8.350 33.990 41 CC_A46G47:C5U6_DD C 46 ? D 6 ? C 47 ? D 5 ? 1 D G 47 1_555 E C 5 1_555 D C 48 1_555 E G 4 1_555 1.003 -1.573 3.154 4.229 6.591 31.517 -3.899 -1.099 2.882 11.906 -7.639 32.451 42 CC_G47C48:G4C5_DD C 47 ? D 5 ? C 48 ? D 4 ? 1 D C 48 1_555 E G 4 1_555 D A 49 1_555 E U 3 1_555 0.285 -1.681 3.172 5.850 8.663 25.761 -5.378 0.672 2.491 18.490 -12.486 27.767 43 CC_C48A49:U3G4_DD C 48 ? D 4 ? C 49 ? D 3 ? 1 D A 49 1_555 E U 3 1_555 D G 50 1_555 E C 2 1_555 -0.458 -1.447 3.081 0.122 8.360 37.303 -3.155 0.714 2.705 12.872 -0.188 38.196 44 CC_A49G50:C2U3_DD C 49 ? D 3 ? C 50 ? D 2 ? 1 D C 25 1_555 F G 5 1_555 D U 26 1_555 F A 4 1_555 0.098 -1.074 3.074 -1.196 3.774 31.625 -2.589 -0.379 2.924 6.891 2.183 31.866 45 CC_C25U26:A14G15_FF C 25 ? F 15 ? C 26 ? F 14 ? 1 D U 26 1_555 F A 4 1_555 D G 27 1_555 F C 3 1_555 0.205 -0.986 3.028 0.198 6.955 38.027 -2.261 -0.288 2.812 10.565 -0.301 38.636 46 CC_U26G27:C13A14_FF C 26 ? F 14 ? C 27 ? F 13 ? 1 D G 27 1_555 F C 3 1_555 D G 28 1_555 F C 2 1_555 -0.069 -2.448 3.244 -0.839 8.036 19.074 -9.762 -0.115 2.053 22.961 2.396 20.700 47 CC_G27G28:C12C13_FF C 27 ? F 13 ? C 28 ? F 12 ? 1 D G 28 1_555 F C 2 1_555 D U 29 1_555 F U 1 1_555 0.775 -1.103 3.046 -3.723 3.487 45.705 -1.686 -1.284 2.890 4.473 4.775 45.974 48 CC_G28U29:U11C12_FF C 28 ? F 12 ? C 29 ? F 11 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of Dental and Craniofacial Research (NIH/NIDCR)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 23G ? ? 23G ? ? 'SUBJECT OF INVESTIGATION' ? 2 MG ? ? MG ? ? 'SUBJECT OF INVESTIGATION' ? # _atom_sites.entry_id 6UFJ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011021 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011021 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008220 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P # loop_