HEADER FLUORESCENT PROTEIN 27-SEP-19 6UHL TITLE CRYSTAL STRUCTURE OF C148 MGFP-SCDNA-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: C148 MGFP-SCDNA-1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: THIS MUTANT OF EGFP HAS A SINGLE SURFACE CYSTEINE AT COMPND 7 RESIDUE 148 (COUNTING FROM M37 AND COUNTING CRO AS 3 RESIDUES) AND AN COMPND 8 N-TERMINAL HIS-TAG. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_TAXID: 6100; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS GREEN FLUORESCENT PROTEIN, BETA-BARREL, DNA, PROTEIN-DNA CONJUGATE, KEYWDS 2 FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.W.WINEGAR,O.G.HAYES,J.R.MCMILLAN,C.A.FIGG,P.J.FOCIA,C.A.MIRKIN REVDAT 4 15-NOV-23 6UHL 1 REMARK REVDAT 3 11-OCT-23 6UHL 1 REMARK REVDAT 2 24-MAR-21 6UHL 1 JRNL REVDAT 1 18-MAR-20 6UHL 0 JRNL AUTH P.H.WINEGAR,O.G.HAYES,J.R.MCMILLAN,C.A.FIGG,P.J.FOCIA, JRNL AUTH 2 C.A.MIRKIN JRNL TITL DNA-DIRECTED PROTEIN PACKING WITHIN SINGLE CRYSTALS. JRNL REF CHEM V. 6 1007 2020 JRNL REFN ESSN 2451-9294 JRNL PMID 33709040 JRNL DOI 10.1016/J.CHEMPR.2020.03.002 REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0257 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.29 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 3 NUMBER OF REFLECTIONS : 41766 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2173 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.96 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2098 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 66.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.3340 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.3430 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3478 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 329 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.170 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.162 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.133 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.698 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3581 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3169 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4870 ; 1.776 ; 1.660 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7346 ; 1.313 ; 1.586 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 449 ; 7.608 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 175 ;32.460 ;23.943 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 552 ;13.758 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;13.866 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 466 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4048 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 733 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6UHL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-OCT-19. REMARK 100 THE DEPOSITION ID IS D_1000244547. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43945 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.910 REMARK 200 RESOLUTION RANGE LOW (A) : 43.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.9 REMARK 200 DATA REDUNDANCY : 9.900 REMARK 200 R MERGE (I) : 0.12200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 67.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 1.31300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 4EUL REMARK 200 REMARK 200 REMARK: CRYSTAL WAS A THIN GREEN PLATE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 MICROLITER C148 MGFP-SCDNA-1 (5 REMARK 280 MG/ML (PROTEIN CONCENTRATION) IN 10 MM TRIS BUFFER PH 7.4, 137 REMARK 280 MM NACL) + 1 MICROLITER CRYSTALLIZATION CONDITION (0.1 M SPG REMARK 280 BUFFER PH 8, 25% (W/V) PEG 1500) IN A SITTING DROP WITH A 70 REMARK 280 MICROLITER RESERVOIR (0.1 M SPG BUFFER PH 8, 25% (W/V) PEG 1500), REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.14500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -34 REMARK 465 ARG A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 HIS A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 GLY A -24 REMARK 465 MET A -23 REMARK 465 ALA A -22 REMARK 465 SER A -21 REMARK 465 MET A -20 REMARK 465 THR A -19 REMARK 465 GLY A -18 REMARK 465 GLY A -17 REMARK 465 GLN A -16 REMARK 465 GLN A -15 REMARK 465 MET A -14 REMARK 465 GLY A -13 REMARK 465 ARG A -12 REMARK 465 ASP A -11 REMARK 465 LEU A -10 REMARK 465 TYR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 ASP A -4 REMARK 465 ASP A -3 REMARK 465 ASP A -2 REMARK 465 ASP A -1 REMARK 465 LYS A 0 REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 SER A 3 REMARK 465 THR A 231 REMARK 465 LEU A 232 REMARK 465 GLY A 233 REMARK 465 MET A 234 REMARK 465 ASP A 235 REMARK 465 GLU A 236 REMARK 465 LEU A 237 REMARK 465 TYR A 238 REMARK 465 LYS A 239 REMARK 465 MET B -34 REMARK 465 ARG B -33 REMARK 465 GLY B -32 REMARK 465 SER B -31 REMARK 465 HIS B -30 REMARK 465 HIS B -29 REMARK 465 HIS B -28 REMARK 465 HIS B -27 REMARK 465 HIS B -26 REMARK 465 HIS B -25 REMARK 465 GLY B -24 REMARK 465 MET B -23 REMARK 465 ALA B -22 REMARK 465 SER B -21 REMARK 465 MET B -20 REMARK 465 THR B -19 REMARK 465 GLY B -18 REMARK 465 GLY B -17 REMARK 465 GLN B -16 REMARK 465 GLN B -15 REMARK 465 MET B -14 REMARK 465 GLY B -13 REMARK 465 ARG B -12 REMARK 465 ASP B -11 REMARK 465 LEU B -10 REMARK 465 TYR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 ASP B -4 REMARK 465 ASP B -3 REMARK 465 ASP B -2 REMARK 465 ASP B -1 REMARK 465 LYS B 0 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 SER B 3 REMARK 465 LYS B 4 REMARK 465 THR B 231 REMARK 465 LEU B 232 REMARK 465 GLY B 233 REMARK 465 MET B 234 REMARK 465 ASP B 235 REMARK 465 GLU B 236 REMARK 465 LEU B 237 REMARK 465 TYR B 238 REMARK 465 LYS B 239 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 GLU A 6 CD OE1 OE2 REMARK 470 GLU A 7 CG CD OE1 OE2 REMARK 470 LYS A 27 CD CE NZ REMARK 470 LYS A 53 CD CE NZ REMARK 470 LYS A 80 CG CD CE NZ REMARK 470 LYS A 102 CE NZ REMARK 470 ASP A 103 CG OD1 OD2 REMARK 470 LYS A 108 CE NZ REMARK 470 LYS A 132 CE NZ REMARK 470 GLU A 133 CB CG CD OE1 OE2 REMARK 470 ASP A 134 CB CG OD1 OD2 REMARK 470 LYS A 141 NZ REMARK 470 LYS A 157 CG CD CE NZ REMARK 470 LYS A 167 CG CD CE NZ REMARK 470 ARG A 169 NE CZ NH1 NH2 REMARK 470 GLU A 173 CD OE1 OE2 REMARK 470 ASP A 191 CB CG OD1 OD2 REMARK 470 GLN A 205 CD OE1 NE2 REMARK 470 LYS A 215 CD CE NZ REMARK 470 GLU B 6 CG CD OE1 OE2 REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 LYS B 27 CD CE NZ REMARK 470 LYS B 53 CG CD CE NZ REMARK 470 LYS B 80 CG CD CE NZ REMARK 470 LYS B 102 CE NZ REMARK 470 LYS B 108 CD CE NZ REMARK 470 ASP B 118 CG OD1 OD2 REMARK 470 GLU B 125 CD OE1 OE2 REMARK 470 LYS B 127 CG CD CE NZ REMARK 470 GLU B 133 CG CD OE1 OE2 REMARK 470 ASP B 134 CA CB CG OD1 OD2 REMARK 470 LYS B 157 CG CD CE NZ REMARK 470 GLU B 173 CG CD OE1 OE2 REMARK 470 GLN B 205 CD OE1 NE2 REMARK 470 LYS B 215 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 31 O HOH B 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 76 152.19 -48.52 REMARK 500 PHE A 166 157.38 179.18 REMARK 500 ASP B 104 -159.50 -155.68 REMARK 500 ILE B 137 -62.40 -90.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LEU B 65 and CRO B REMARK 800 66 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide CRO B 66 and VAL B REMARK 800 69 DBREF 6UHL A 4 230 PDB 6UHL 6UHL 4 230 DBREF 6UHL B 4 230 PDB 6UHL 6UHL 4 230 SEQRES 1 A 272 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 A 272 SER MET THR GLY GLY GLN GLN MET GLY ARG ASP LEU TYR SEQRES 3 A 272 GLU ASN LEU TYR ASP ASP ASP ASP LYS MET VAL SER LYS SEQRES 4 A 272 GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE LEU VAL SEQRES 5 A 272 GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SER VAL SEQRES 6 A 272 SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY LYS LEU SEQRES 7 A 272 THR LEU LYS PHE ILE LEU THR THR GLY LYS LEU PRO VAL SEQRES 8 A 272 PRO TRP PRO THR LEU VAL THR THR LEU CRO VAL GLN CYS SEQRES 9 A 272 PHE SER ARG TYR PRO ASP HIS MET LYS GLN HIS ASP PHE SEQRES 10 A 272 PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN GLU ARG SEQRES 11 A 272 THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS THR ARG SEQRES 12 A 272 ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL ASN ARG SEQRES 13 A 272 ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP GLY ASN SEQRES 14 A 272 ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR ASN CYS HIS SEQRES 15 A 272 ASN VAL TYR ILE MET ALA ASP LYS GLN LYS ASN GLY ILE SEQRES 16 A 272 LYS VAL ASN PHE LYS ILE ARG HIS ASN ILE GLU ASP GLY SEQRES 17 A 272 SER VAL GLN LEU ALA ASP HIS TYR GLN GLN ASN THR PRO SEQRES 18 A 272 ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN HIS TYR SEQRES 19 A 272 LEU SER THR GLN SER ALA LEU SER LYS ASP PRO ASN GLU SEQRES 20 A 272 LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL THR ALA SEQRES 21 A 272 ALA GLY ILE THR LEU GLY MET ASP GLU LEU TYR LYS SEQRES 1 B 272 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET ALA SEQRES 2 B 272 SER MET THR GLY GLY GLN GLN MET GLY ARG ASP LEU TYR SEQRES 3 B 272 GLU ASN LEU TYR ASP ASP ASP ASP LYS MET VAL SER LYS SEQRES 4 B 272 GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE LEU VAL SEQRES 5 B 272 GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SER VAL SEQRES 6 B 272 SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY LYS LEU SEQRES 7 B 272 THR LEU LYS PHE ILE LEU THR THR GLY LYS LEU PRO VAL SEQRES 8 B 272 PRO TRP PRO THR LEU VAL THR THR LEU CRO VAL GLN CYS SEQRES 9 B 272 PHE SER ARG TYR PRO ASP HIS MET LYS GLN HIS ASP PHE SEQRES 10 B 272 PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN GLU ARG SEQRES 11 B 272 THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS THR ARG SEQRES 12 B 272 ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL ASN ARG SEQRES 13 B 272 ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP GLY ASN SEQRES 14 B 272 ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR ASN CYS HIS SEQRES 15 B 272 ASN VAL TYR ILE MET ALA ASP LYS GLN LYS ASN GLY ILE SEQRES 16 B 272 LYS VAL ASN PHE LYS ILE ARG HIS ASN ILE GLU ASP GLY SEQRES 17 B 272 SER VAL GLN LEU ALA ASP HIS TYR GLN GLN ASN THR PRO SEQRES 18 B 272 ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN HIS TYR SEQRES 19 B 272 LEU SER THR GLN SER ALA LEU SER LYS ASP PRO ASN GLU SEQRES 20 B 272 LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL THR ALA SEQRES 21 B 272 ALA GLY ILE THR LEU GLY MET ASP GLU LEU TYR LYS HET CRO A 66 22 HET CRO B 66 22 HET UNL A 301 1 HET UNL B 301 1 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM UNL UNKNOWN LIGAND HETSYN CRO PEPTIDE DERIVED CHROMOPHORE FORMUL 1 CRO 2(C15 H17 N3 O5) FORMUL 5 HOH *329(H2 O) HELIX 1 AA1 LYS A 4 THR A 10 5 7 HELIX 2 AA2 PRO A 57 VAL A 62 5 6 HELIX 3 AA3 VAL A 69 SER A 73 5 5 HELIX 4 AA4 PRO A 76 HIS A 82 5 7 HELIX 5 AA5 ASP A 83 ALA A 88 1 6 HELIX 6 AA6 LYS A 157 ASN A 160 5 4 HELIX 7 AA7 GLY B 5 THR B 10 5 6 HELIX 8 AA8 PRO B 57 VAL B 62 5 6 HELIX 9 AA9 VAL B 69 SER B 73 5 5 HELIX 10 AB1 PRO B 76 HIS B 82 5 7 HELIX 11 AB2 ASP B 83 ALA B 88 1 6 HELIX 12 AB3 LYS B 157 ASN B 160 5 4 SHEET 1 AA112 VAL A 12 VAL A 23 0 SHEET 2 AA112 HIS A 26 ASP A 37 -1 O PHE A 28 N GLY A 21 SHEET 3 AA112 LYS A 42 GLY A 52 -1 O LYS A 42 N ASP A 37 SHEET 4 AA112 HIS A 218 ALA A 228 -1 O LEU A 221 N LEU A 45 SHEET 5 AA112 HIS A 200 SER A 209 -1 N SER A 203 O THR A 226 SHEET 6 AA112 HIS A 149 ASP A 156 -1 N ILE A 153 O HIS A 200 SHEET 7 AA112 GLY A 161 ASN A 171 -1 O LYS A 163 N MET A 154 SHEET 8 AA112 VAL A 177 PRO A 188 -1 O ALA A 180 N ILE A 168 SHEET 9 AA112 TYR A 93 PHE A 101 -1 N PHE A 100 O ASP A 181 SHEET 10 AA112 ASN A 106 GLU A 116 -1 O TYR A 107 N ILE A 99 SHEET 11 AA112 THR A 119 ILE A 129 -1 O GLU A 125 N ARG A 110 SHEET 12 AA112 VAL A 12 VAL A 23 1 N GLU A 18 O ILE A 124 SHEET 1 AA212 VAL B 13 VAL B 23 0 SHEET 2 AA212 HIS B 26 ASP B 37 -1 O GLY B 36 N VAL B 13 SHEET 3 AA212 LYS B 42 THR B 51 -1 O ILE B 48 N SER B 31 SHEET 4 AA212 HIS B 218 ALA B 228 -1 O LEU B 221 N LEU B 45 SHEET 5 AA212 HIS B 200 SER B 209 -1 N GLN B 205 O PHE B 224 SHEET 6 AA212 HIS B 149 ASP B 156 -1 N ILE B 153 O HIS B 200 SHEET 7 AA212 GLY B 161 ASN B 171 -1 O GLY B 161 N ASP B 156 SHEET 8 AA212 VAL B 177 PRO B 188 -1 O HIS B 182 N PHE B 166 SHEET 9 AA212 TYR B 93 PHE B 101 -1 N VAL B 94 O THR B 187 SHEET 10 AA212 ASN B 106 GLU B 116 -1 O VAL B 113 N TYR B 93 SHEET 11 AA212 THR B 119 ILE B 129 -1 O GLU B 125 N ARG B 110 SHEET 12 AA212 VAL B 13 VAL B 23 1 N ASP B 22 O GLY B 128 LINK C LEU A 65 N1 CRO A 66 1555 1555 1.53 LINK C3 CRO A 66 N VAL A 69 1555 1555 1.55 LINK C LEU B 65 N1 CRO B 66 1555 1555 1.55 LINK C3 CRO B 66 N VAL B 69 1555 1555 1.55 CISPEP 1 MET A 89 PRO A 90 0 7.49 CISPEP 2 MET B 89 PRO B 90 0 4.13 SITE 1 AC1 22 LEU B 45 LEU B 61 VAL B 62 THR B 63 SITE 2 AC1 22 THR B 64 VAL B 69 GLN B 70 GLN B 95 SITE 3 AC1 22 ARG B 97 VAL B 113 ASN B 122 TYR B 146 SITE 4 AC1 22 HIS B 149 VAL B 151 THR B 204 LEU B 221 SITE 5 AC1 22 GLU B 223 HOH B 405 HOH B 411 HOH B 423 SITE 6 AC1 22 HOH B 456 HOH B 532 SITE 1 AC2 23 LEU B 45 VAL B 62 THR B 63 THR B 64 SITE 2 AC2 23 LEU B 65 GLN B 70 CYS B 71 PHE B 72 SITE 3 AC2 23 GLN B 95 ARG B 97 VAL B 113 ASN B 122 SITE 4 AC2 23 TYR B 146 HIS B 149 VAL B 151 THR B 204 SITE 5 AC2 23 LEU B 221 GLU B 223 HOH B 405 HOH B 411 SITE 6 AC2 23 HOH B 423 HOH B 456 HOH B 488 CRYST1 64.870 52.290 86.800 90.00 94.13 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015415 0.000000 0.001113 0.00000 SCALE2 0.000000 0.019124 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011551 0.00000